Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11920 |
| fragaria_vesca | FvH4_4g36430 |
| malus_domestica | MD13G1009300.v1.1 MD16G1007300.v1.1 |
| prunus_persica | Prupe.1G343400_v2.0.a1 |
| pyrus_communis | pycom13g00790 pycom16g00690 |
| rosa_chinensis | RchiOBHm_Chr4g0446191 |
| rosa_laevigata | RLG00000005684 |
| rosa_multiflora | Rmu_sc0009254.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00386580 |
| rosa_rugosa | Rorug04G0368300 |
| rosa_samantha | Rh4AG430300 Rh4BG439600 Rh4CG457000 Rh4DG438200 |
| rosa_wichuraiana | Rw4G036750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 176, 736 |
| AatII | GACGTC | 1 cut(s) | 180 |
| Acc36I | ACCTGC | 1 cut(s) | 1904 |
| AccB1I | GGYRCC | 3 cut(s) | 313, 745, 1305 |
| AccI | GTMKAC | 1 cut(s) | 690 |
| AccII | CGCG | 1 cut(s) | 869 |
| AccIII | TCCGGA | 2 cut(s) | 417, 642 |
| AcoI | YGGCCR | 3 cut(s) | 636, 1054, 1246 |
| AcsI | RAATTY | 4 cut(s) | 380, 796, 1343, 1360 |
| AcuI | CTGAAG | 2 cut(s) | 473, 1260 |
| AcvI | CACGTG | 1 cut(s) | 220 |
| AcyI | GRCGYC | 3 cut(s) | 177, 1306, 1477 |
| AdeI | CACNNNGTG | 1 cut(s) | 1487 |
| AfaI | GTAC | 3 cut(s) | 736, 1355, 1439 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 65, 307, 404, 624, 887, 1063 |
| AgeI | ACCGGT | 1 cut(s) | 731 |
| AjiI | CACGTC | 1 cut(s) | 1114 |
| AjnI | CCWGG | 3 cut(s) | 156, 319, 611 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1164, 1196 |
| Alw21I | GWGCWC | 1 cut(s) | 219 |
| Alw26I | GTCTC | 4 cut(s) | 557, 590, 1585, 1623 |
| Ama87I | CYCGRG | 2 cut(s) | 8, 902 |
| Aor13HI | TCCGGA | 2 cut(s) | 417, 642 |
| AoxI | GGCC | 5 cut(s) | 322, 532, 636, 1054, 1246 |
| ApeKI | GCWGC | 3 cut(s) | 143, 571, 1235 |
| ApoI | RAATTY | 4 cut(s) | 380, 796, 1343, 1360 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 467, 499, 568, 600 |
| AsiGI | ACCGGT | 1 cut(s) | 731 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 773, 1004 |
| AspLEI | GCGC | 3 cut(s) | 793, 871, 1308 |
| AspS9I | GGNCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| AsuC2I | CCSGG | 3 cut(s) | 203, 274, 626 |
| AsuHPI | GGTGA | 8 cut(s) | 16, 559, 1249, 1370, 1719, 1807, 1816, 1949 |
| AsuNHI | GCTAGC | 1 cut(s) | 1417 |
| AvaI | CYCGRG | 2 cut(s) | 8, 902 |
| AvaII | GGWCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| BalI | TGGCCA | 1 cut(s) | 1248 |
| BamHI | GGATCC | 3 cut(s) | 276, 1205, 1884 |
| BanI | GGYRCC | 3 cut(s) | 313, 745, 1305 |
| BanII | GRGCYC | 1 cut(s) | 1227 |
| BbrPI | CACGTG | 1 cut(s) | 220 |
| Bbv12I | GWGCWC | 1 cut(s) | 219 |
| BbvCI | CCTCAGC | 1 cut(s) | 803 |
| BbvI | GCAGC | 3 cut(s) | 155, 583, 1247 |
| BccI | CCATC | 4 cut(s) | 531, 1015, 1133, 1934 |
| BceAI | ACGGC | 5 cut(s) | 181, 215, 623, 651, 1041 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1088, 1122 |
| BciT130I | CCWGG | 3 cut(s) | 158, 321, 613 |
| BcnI | CCSGG | 3 cut(s) | 203, 274, 626 |
| BcoDI | GTCTC | 4 cut(s) | 557, 590, 1585, 1623 |
| BfaI | CTAG | 4 cut(s) | 1092, 1418, 1607, 1908 |
| BfmI | CTRYAG | 1 cut(s) | 1233 |
| BfoI | RGCGCY | 2 cut(s) | 794, 1309 |
| BfuAI | ACCTGC | 1 cut(s) | 1904 |
| BglII | AGATCT | 1 cut(s) | 1754 |
| BisI | GCNGC | 9 cut(s) | 56, 144, 572, 814, 1015, 1054, 1236, 1636, 1761 |
| BlsI | GCNGC | 9 cut(s) | 57, 145, 573, 815, 1016, 1055, 1237, 1637, 1762 |
| Bme1390I | CCNGG | 6 cut(s) | 158, 203, 274, 321, 613, 626 |
| Bme18I | GGWCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| BmeT110I | CYCGRG | 2 cut(s) | 8, 902 |
| BmgBI | CACGTC | 1 cut(s) | 1114 |
| BmgT120I | GGNCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| BmiI | GGNNCC | 9 cut(s) | 198, 261, 278, 315, 747, 1207, 1307, 1886, 1902 |
| BmrFI | CCNGG | 6 cut(s) | 158, 203, 274, 321, 613, 626 |
| BmsI | GCATC | 1 cut(s) | 1581 |
| BmtI | GCTAGC | 1 cut(s) | 1421 |
| BpmI | CTGGAG | 3 cut(s) | 179, 595, 1647 |
| Bpu10I | CCTNAGC | 1 cut(s) | 803 |
| BpuEI | CTTGAG | 3 cut(s) | 455, 1184, 1301 |
| BpuMI | CCSGG | 3 cut(s) | 203, 274, 626 |
| Bsa29I | ATCGAT | 1 cut(s) | 1156 |
| BsaAI | YACGTR | 1 cut(s) | 220 |
| BsaBI | GATNNNNATC | 2 cut(s) | 932, 989 |
| BsaHI | GRCGYC | 3 cut(s) | 177, 1306, 1477 |
| BsaI | GGTCTC | 1 cut(s) | 1585 |
| BsaJI | CCNNGG | 5 cut(s) | 120, 201, 441, 1201, 1446 |
| BsaWI | WCCGGW | 4 cut(s) | 35, 417, 642, 731 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 422, 452, 771, 801 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 65, 307, 404, 624, 887, 1063 |
| Bse118I | RCCGGY | 3 cut(s) | 397, 731, 1010 |
| Bse1I | ACTGG | 3 cut(s) | 1092, 1522, 1630 |
| Bse3DI | GCAATG | 1 cut(s) | 1696 |
| Bse8I | GATNNNNATC | 2 cut(s) | 932, 989 |
| BseAI | TCCGGA | 2 cut(s) | 417, 642 |
| BseBI | CCWGG | 3 cut(s) | 158, 321, 613 |
| BseCI | ATCGAT | 1 cut(s) | 1156 |
| BseDI | CCNNGG | 5 cut(s) | 120, 201, 441, 1201, 1446 |
| BseGI | GGATG | 2 cut(s) | 414, 1572 |
| BseJI | GATNNNNATC | 2 cut(s) | 932, 989 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 65, 307, 404, 624, 887, 1063 |
| BseMI | GCAATG | 1 cut(s) | 1696 |
| BseMII | CTCAG | 5 cut(s) | 682, 716, 764, 794, 944 |
| BseNI | ACTGG | 3 cut(s) | 1092, 1522, 1630 |
| BseRI | GAGGAG | 5 cut(s) | 269, 327, 330, 430, 920 |
| BseX3I | CGGCCG | 2 cut(s) | 636, 1054 |
| BseXI | GCAGC | 3 cut(s) | 155, 583, 1247 |
| BsgI | GTGCAG | 1 cut(s) | 616 |
| Bsh1236I | CGCG | 1 cut(s) | 869 |
| Bsh1285I | CGRYCG | 3 cut(s) | 36, 639, 1057 |
| BshFI | GGCC | 5 cut(s) | 324, 534, 638, 1056, 1248 |
| BshNI | GGYRCC | 3 cut(s) | 313, 745, 1305 |
| BshTI | ACCGGT | 1 cut(s) | 731 |
| BshVI | ATCGAT | 1 cut(s) | 1156 |
| BsiEI | CGRYCG | 3 cut(s) | 36, 639, 1057 |
| BsiHKAI | GWGCWC | 1 cut(s) | 219 |
| BsiHKCI | CYCGRG | 2 cut(s) | 8, 902 |
| BslFI | GGGAC | 2 cut(s) | 641, 1708 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 65, 307, 404, 624, 887, 1063 |
| BsmAI | GTCTC | 4 cut(s) | 557, 590, 1585, 1623 |
| BsmBI | CGTCTC | 1 cut(s) | 557 |
| BsmFI | GGGAC | 2 cut(s) | 641, 1708 |
| BsnI | GGCC | 5 cut(s) | 324, 534, 638, 1056, 1248 |
| Bso31I | GGTCTC | 1 cut(s) | 1585 |
| BsoBI | CYCGRG | 2 cut(s) | 8, 902 |
| Bsp1286I | GDGCHC | 2 cut(s) | 219, 1227 |
| Bsp13I | TCCGGA | 2 cut(s) | 417, 642 |
| Bsp1407I | TGTACA | 1 cut(s) | 1437 |
| Bsp19I | CCATGG | 1 cut(s) | 1446 |
| BspANI | GGCC | 5 cut(s) | 324, 534, 638, 1056, 1248 |
| BspCNI | CTCAG | 5 cut(s) | 681, 715, 763, 795, 945 |
| BspDI | ATCGAT | 1 cut(s) | 1156 |
| BspEI | TCCGGA | 2 cut(s) | 417, 642 |
| BspFNI | CGCG | 1 cut(s) | 869 |
| BspHI | TCATGA | 1 cut(s) | 328 |
| BspLI | GGNNCC | 9 cut(s) | 198, 261, 278, 315, 747, 1207, 1307, 1886, 1902 |
| BspMAI | CTGCAG | 1 cut(s) | 1237 |
| BspMI | ACCTGC | 1 cut(s) | 1904 |
| BspOI | GCTAGC | 1 cut(s) | 1421 |
| BspT107I | GGYRCC | 3 cut(s) | 313, 745, 1305 |
| BspTNI | GGTCTC | 1 cut(s) | 1585 |
| BsrDI | GCAATG | 1 cut(s) | 1696 |
| BsrFI | RCCGGY | 3 cut(s) | 397, 731, 1010 |
| BsrGI | TGTACA | 1 cut(s) | 1437 |
| BsrI | ACTGG | 3 cut(s) | 1092, 1522, 1630 |
| BssAI | RCCGGY | 3 cut(s) | 397, 731, 1010 |
| BssECI | CCNNGG | 5 cut(s) | 120, 201, 441, 1201, 1446 |
| BssNI | GRCGYC | 3 cut(s) | 177, 1306, 1477 |
| BssT1I | CCWWGG | 2 cut(s) | 120, 1446 |
| Bst2UI | CCWGG | 3 cut(s) | 158, 321, 613 |
| Bst4CI | ACNGT | 7 cut(s) | 547, 974, 1220, 1337, 1686, 1714, 1816 |
| Bst6I | CTCTTC | 4 cut(s) | 201, 246, 416, 1802 |
| BstACI | GRCGYC | 3 cut(s) | 177, 1306, 1477 |
| BstAUI | TGTACA | 1 cut(s) | 1437 |
| BstBAI | YACGTR | 1 cut(s) | 220 |
| BstC8I | GCNNGC | 6 cut(s) | 399, 873, 1012, 1233, 1419, 1647 |
| BstDEI | CTNAG | 7 cut(s) | 668, 702, 750, 803, 953, 1553, 1577 |
| BstDSI | CCRYGG | 1 cut(s) | 1446 |
| BstF5I | GGATG | 2 cut(s) | 414, 1572 |
| BstFNI | CGCG | 1 cut(s) | 869 |
| BstH2I | RGCGCY | 2 cut(s) | 794, 1309 |
| BstHHI | GCGC | 3 cut(s) | 793, 871, 1308 |
| BstMAI | GTCTC | 4 cut(s) | 557, 590, 1585, 1623 |
| BstMCI | CGRYCG | 3 cut(s) | 36, 639, 1057 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 149, 304, 466, 577, 630, 799, 877, 958, 1011 |
| BstNI | CCWGG | 3 cut(s) | 158, 321, 613 |
| BstNSI | RCATGY | 2 cut(s) | 397, 1460 |
| BstSCI | CCNGG | 6 cut(s) | 156, 201, 272, 319, 611, 624 |
| BstSFI | CTRYAG | 1 cut(s) | 1233 |
| BstUI | CGCG | 1 cut(s) | 869 |
| BstV1I | GCAGC | 3 cut(s) | 155, 583, 1247 |
| BstX2I | RGATCY | 6 cut(s) | 4, 276, 1205, 1502, 1754, 1884 |
| BstYI | RGATCY | 6 cut(s) | 4, 276, 1205, 1502, 1754, 1884 |
| BstZI | CGGCCG | 2 cut(s) | 636, 1054 |
| Bsu15I | ATCGAT | 1 cut(s) | 1156 |
| BsuRI | GGCC | 5 cut(s) | 324, 534, 638, 1056, 1248 |
| BsuTUI | ATCGAT | 1 cut(s) | 1156 |
| BtgI | CCRYGG | 1 cut(s) | 1446 |
| BtrI | CACGTC | 1 cut(s) | 1114 |
| BtsCI | GGATG | 2 cut(s) | 414, 1572 |
| BtsIMutI | CAGTG | 2 cut(s) | 1342, 1623 |
| BveI | ACCTGC | 1 cut(s) | 1904 |
| Cac8I | GCNNGC | 6 cut(s) | 399, 873, 1012, 1233, 1419, 1647 |
| CciI | TCATGA | 1 cut(s) | 328 |
| CfoI | GCGC | 3 cut(s) | 793, 871, 1308 |
| Cfr10I | RCCGGY | 3 cut(s) | 397, 731, 1010 |
| Cfr13I | GGNCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| ClaI | ATCGAT | 1 cut(s) | 1156 |
| CseI | GACGC | 2 cut(s) | 875, 1466 |
| Csp6I | GTAC | 3 cut(s) | 735, 1354, 1438 |
| CspAI | ACCGGT | 1 cut(s) | 731 |
| CviAII | CATG | 8 cut(s) | 290, 329, 394, 1169, 1267, 1447, 1457, 1984 |
| CviQI | GTAC | 3 cut(s) | 735, 1354, 1438 |
| DdeI | CTNAG | 7 cut(s) | 668, 702, 750, 803, 953, 1553, 1577 |
| DinI | GGCGCC | 1 cut(s) | 1307 |
| DraIII | CACNNNGTG | 1 cut(s) | 1487 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 176, 736 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 176, 736 |
| EaeI | YGGCCR | 3 cut(s) | 636, 1054, 1246 |
| EagI | CGGCCG | 2 cut(s) | 636, 1054 |
| Eam1104I | CTCTTC | 4 cut(s) | 201, 246, 416, 1802 |
| EarI | CTCTTC | 4 cut(s) | 201, 246, 416, 1802 |
| EclXI | CGGCCG | 2 cut(s) | 636, 1054 |
| Eco130I | CCWWGG | 2 cut(s) | 120, 1446 |
| Eco24I | GRGCYC | 1 cut(s) | 1227 |
| Eco31I | GGTCTC | 1 cut(s) | 1585 |
| Eco47I | GGWCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| Eco52I | CGGCCG | 2 cut(s) | 636, 1054 |
| Eco57I | CTGAAG | 2 cut(s) | 473, 1260 |
| Eco72I | CACGTG | 1 cut(s) | 220 |
| Eco88I | CYCGRG | 2 cut(s) | 8, 902 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1030, 1946 |
| EcoRI | GAATTC | 2 cut(s) | 796, 1343 |
| EcoRII | CCWGG | 3 cut(s) | 156, 319, 611 |
| EcoT14I | CCWWGG | 2 cut(s) | 120, 1446 |
| EcoT38I | GRGCYC | 1 cut(s) | 1227 |
| EgeI | GGCGCC | 1 cut(s) | 1307 |
| EheI | GGCGCC | 1 cut(s) | 1307 |
| ErhI | CCWWGG | 2 cut(s) | 120, 1446 |
| Esp3I | CGTCTC | 1 cut(s) | 557 |
| FaeI | CATG | 8 cut(s) | 293, 332, 397, 1172, 1270, 1450, 1460, 1987 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 989, 1021 |
| FaqI | GGGAC | 2 cut(s) | 641, 1708 |
| FatI | CATG | 8 cut(s) | 289, 328, 393, 1168, 1266, 1446, 1456, 1983 |
| FauI | CCCGC | 1 cut(s) | 880 |
| FblI | GTMKAC | 1 cut(s) | 690 |
| Fnu4HI | GCNGC | 9 cut(s) | 56, 144, 572, 814, 1015, 1054, 1236, 1636, 1761 |
| FokI | GGATG | 2 cut(s) | 401, 1559 |
| FriOI | GRGCYC | 1 cut(s) | 1227 |
| Fsp4HI | GCNGC | 9 cut(s) | 56, 144, 572, 814, 1015, 1054, 1236, 1636, 1761 |
| FspBI | CTAG | 4 cut(s) | 1092, 1418, 1607, 1908 |
| GlaI | GCGC | 3 cut(s) | 792, 870, 1307 |
| GluI | GCNGC | 9 cut(s) | 56, 144, 572, 814, 1015, 1054, 1236, 1636, 1761 |
| GsuI | CTGGAG | 3 cut(s) | 179, 595, 1647 |
| HaeII | RGCGCY | 2 cut(s) | 794, 1309 |
| HaeIII | GGCC | 5 cut(s) | 324, 534, 638, 1056, 1248 |
| HgaI | GACGC | 2 cut(s) | 875, 1466 |
| HhaI | GCGC | 3 cut(s) | 793, 871, 1308 |
| Hin1I | GRCGYC | 3 cut(s) | 177, 1306, 1477 |
| Hin1II | CATG | 8 cut(s) | 293, 332, 397, 1172, 1270, 1450, 1460, 1987 |
| Hin6I | GCGC | 3 cut(s) | 791, 869, 1306 |
| HinP1I | GCGC | 3 cut(s) | 791, 869, 1306 |
| HincII | GTYRAC | 1 cut(s) | 691 |
| HindII | GTYRAC | 1 cut(s) | 691 |
| HinfI | GANTC | 9 cut(s) | 50, 209, 583, 666, 672, 964, 1158, 1283, 1663 |
| HphI | GGTGA | 8 cut(s) | 16, 559, 1249, 1370, 1719, 1807, 1816, 1949 |
| Hpy166II | GTNNAC | 7 cut(s) | 391, 691, 886, 1061, 1387, 1481, 1798 |
| Hpy8I | GTNNAC | 7 cut(s) | 391, 691, 886, 1061, 1387, 1481, 1798 |
| HpyAV | CCTTC | 6 cut(s) | 335, 354, 829, 1074, 1344, 1432 |
| HpyCH4III | ACNGT | 7 cut(s) | 547, 974, 1220, 1337, 1686, 1714, 1816 |
| HpyCH4IV | ACGT | 6 cut(s) | 177, 219, 687, 693, 737, 1113 |
| HpyCH4V | TGCA | 5 cut(s) | 293, 633, 1235, 1460, 1689 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 149, 304, 466, 577, 630, 799, 877, 958, 1011 |
| HpyF3I | CTNAG | 7 cut(s) | 668, 702, 750, 803, 953, 1553, 1577 |
| HpySE526I | ACGT | 6 cut(s) | 177, 219, 687, 693, 737, 1113 |
| Hsp92I | GRCGYC | 3 cut(s) | 177, 1306, 1477 |
| Hsp92II | CATG | 8 cut(s) | 293, 332, 397, 1172, 1270, 1450, 1460, 1987 |
| HspAI | GCGC | 3 cut(s) | 791, 869, 1306 |
| KasI | GGCGCC | 1 cut(s) | 1305 |
| Kpn2I | TCCGGA | 2 cut(s) | 417, 642 |
| KroI | GCCGGC | 2 cut(s) | 397, 1010 |
| KroNI | GCCGGC | 2 cut(s) | 399, 1012 |
| LmnI | GCTCC | 6 cut(s) | 140, 202, 214, 303, 568, 645 |
| Lsp1109I | GCAGC | 3 cut(s) | 155, 583, 1247 |
| LweI | GCATC | 1 cut(s) | 1581 |
| MaeI | CTAG | 4 cut(s) | 1092, 1418, 1607, 1908 |
| MaeII | ACGT | 6 cut(s) | 177, 219, 687, 693, 737, 1113 |
| MaeIII | GTNAC | 7 cut(s) | 16, 232, 511, 541, 1109, 1331, 1556 |
| MfeI | CAATTG | 1 cut(s) | 619 |
| MflI | RGATCY | 6 cut(s) | 4, 276, 1205, 1502, 1754, 1884 |
| MhlI | GDGCHC | 2 cut(s) | 219, 1227 |
| MlsI | TGGCCA | 1 cut(s) | 1248 |
| MluNI | TGGCCA | 1 cut(s) | 1248 |
| Mly113I | GGCGCC | 1 cut(s) | 1306 |
| MlyI | GAGTC | 5 cut(s) | 59, 218, 592, 660, 1292 |
| MmeI | TCCRAC | 5 cut(s) | 192, 307, 575, 1026, 1513 |
| Mox20I | TGGCCA | 1 cut(s) | 1248 |
| MreI | CGCCGGCG | 1 cut(s) | 1010 |
| MroI | TCCGGA | 2 cut(s) | 417, 642 |
| MroNI | GCCGGC | 2 cut(s) | 397, 1010 |
| MroXI | GAANNNNTTC | 2 cut(s) | 773, 1004 |
| MscI | TGGCCA | 1 cut(s) | 1248 |
| MseI | TTAA | 3 cut(s) | 126, 1751, 1776 |
| Msp20I | TGGCCA | 1 cut(s) | 1248 |
| MspA1I | CMGCKG | 3 cut(s) | 813, 829, 1238 |
| MspR9I | CCNGG | 6 cut(s) | 158, 203, 274, 321, 613, 626 |
| MunI | CAATTG | 1 cut(s) | 619 |
| MvaI | CCWGG | 3 cut(s) | 158, 321, 613 |
| MvnI | CGCG | 1 cut(s) | 869 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 149, 304, 466, 577, 630, 799, 877, 958, 1011 |
| NaeI | GCCGGC | 2 cut(s) | 399, 1012 |
| NarI | GGCGCC | 1 cut(s) | 1306 |
| NciI | CCSGG | 3 cut(s) | 203, 274, 626 |
| NcoI | CCATGG | 1 cut(s) | 1446 |
| NgoMIV | GCCGGC | 2 cut(s) | 397, 1010 |
| NheI | GCTAGC | 1 cut(s) | 1417 |
| NlaIII | CATG | 8 cut(s) | 293, 332, 397, 1172, 1270, 1450, 1460, 1987 |
| NlaIV | GGNNCC | 9 cut(s) | 198, 261, 278, 315, 747, 1207, 1307, 1886, 1902 |
| NmeAIII | GCCGAG | 1 cut(s) | 422 |
| NmuCI | GTSAC | 2 cut(s) | 541, 1109 |
| NspI | RCATGY | 2 cut(s) | 397, 1460 |
| PaeR7I | CTCGAG | 1 cut(s) | 902 |
| PagI | TCATGA | 1 cut(s) | 328 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1014 |
| PdiI | GCCGGC | 2 cut(s) | 399, 1012 |
| PdmI | GAANNNNTTC | 2 cut(s) | 773, 1004 |
| PfeI | GAWTC | 4 cut(s) | 672, 964, 1158, 1663 |
| PflFI | GACNNNGTC | 1 cut(s) | 1699 |
| PinAI | ACCGGT | 1 cut(s) | 731 |
| PkrI | GCNGC | 9 cut(s) | 57, 145, 573, 815, 1016, 1055, 1237, 1637, 1762 |
| PleI | GAGTC | 5 cut(s) | 58, 217, 591, 660, 1291 |
| PluTI | GGCGCC | 1 cut(s) | 1309 |
| PmaCI | CACGTG | 1 cut(s) | 220 |
| PmlI | CACGTG | 1 cut(s) | 220 |
| PpsI | GAGTC | 5 cut(s) | 58, 217, 591, 660, 1291 |
| Ppu21I | YACGTR | 1 cut(s) | 220 |
| PpuMI | RGGWCCY | 2 cut(s) | 1030, 1946 |
| Psp5II | RGGWCCY | 2 cut(s) | 1030, 1946 |
| Psp6I | CCWGG | 3 cut(s) | 156, 319, 611 |
| PspCI | CACGTG | 1 cut(s) | 220 |
| PspGI | CCWGG | 3 cut(s) | 156, 319, 611 |
| PspN4I | GGNNCC | 9 cut(s) | 198, 261, 278, 315, 747, 1207, 1307, 1886, 1902 |
| PspPI | GGNCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| PspPPI | RGGWCCY | 2 cut(s) | 1030, 1946 |
| PstI | CTGCAG | 1 cut(s) | 1237 |
| PsuI | RGATCY | 6 cut(s) | 4, 276, 1205, 1502, 1754, 1884 |
| PsyI | GACNNNGTC | 1 cut(s) | 1699 |
| PvuII | CAGCTG | 1 cut(s) | 1238 |
| RsaI | GTAC | 3 cut(s) | 736, 1355, 1439 |
| RsaNI | GTAC | 3 cut(s) | 735, 1354, 1438 |
| SalI | GTCGAC | 1 cut(s) | 689 |
| SaqAI | TTAA | 3 cut(s) | 126, 1751, 1776 |
| SatI | GCNGC | 9 cut(s) | 56, 144, 572, 814, 1015, 1054, 1236, 1636, 1761 |
| Sau96I | GGNCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| SchI | GAGTC | 5 cut(s) | 59, 218, 592, 660, 1292 |
| ScrFI | CCNGG | 6 cut(s) | 158, 203, 274, 321, 613, 626 |
| SduI | GDGCHC | 2 cut(s) | 219, 1227 |
| SfaNI | GCATC | 1 cut(s) | 1581 |
| SfcI | CTRYAG | 1 cut(s) | 1233 |
| SfoI | GGCGCC | 1 cut(s) | 1307 |
| Sfr274I | CTCGAG | 1 cut(s) | 902 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1010 |
| SgrDI | CGTCGACG | 1 cut(s) | 689 |
| SinI | GGWCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| SlaI | CTCGAG | 1 cut(s) | 902 |
| SmlI | CTYRAG | 4 cut(s) | 470, 902, 1163, 1280 |
| SmoI | CTYRAG | 4 cut(s) | 470, 902, 1163, 1280 |
| SspDI | GGCGCC | 1 cut(s) | 1305 |
| SspMI | CTAG | 4 cut(s) | 1092, 1418, 1607, 1908 |
| StyD4I | CCNGG | 6 cut(s) | 156, 201, 272, 319, 611, 624 |
| StyI | CCWWGG | 2 cut(s) | 120, 1446 |
| TaaI | ACNGT | 7 cut(s) | 547, 974, 1220, 1337, 1686, 1714, 1816 |
| TaiI | ACGT | 6 cut(s) | 180, 222, 690, 696, 740, 1116 |
| TaqI | TCGA | 7 cut(s) | 690, 723, 851, 903, 1156, 1563, 1740 |
| TatI | WGTACW | 1 cut(s) | 1437 |
| TauI | GCSGC | 6 cut(s) | 58, 816, 1017, 1056, 1638, 1763 |
| TfiI | GAWTC | 4 cut(s) | 672, 964, 1158, 1663 |
| Tru1I | TTAA | 3 cut(s) | 126, 1751, 1776 |
| Tru9I | TTAA | 3 cut(s) | 126, 1751, 1776 |
| TscAI | CASTG | 2 cut(s) | 1342, 1630 |
| TseFI | GTSAC | 2 cut(s) | 541, 1109 |
| TseI | GCWGC | 3 cut(s) | 143, 571, 1235 |
| Tsp45I | GTSAC | 2 cut(s) | 541, 1109 |
| TspDTI | ATGAA | 5 cut(s) | 317, 995, 1001, 1093, 1185 |
| TspGWI | ACGGA | 2 cut(s) | 581, 932 |
| TspRI | CASTG | 2 cut(s) | 1342, 1630 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1699 |
| VpaK11BI | GGWCC | 9 cut(s) | 615, 729, 919, 970, 1030, 1812, 1900, 1946, 1980 |
| XapI | RAATTY | 4 cut(s) | 380, 796, 1343, 1360 |
| XceI | RCATGY | 2 cut(s) | 397, 1460 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1529 |
| XhoI | CTCGAG | 1 cut(s) | 902 |
| XmiI | GTMKAC | 1 cut(s) | 690 |
| XmnI | GAANNNNTTC | 2 cut(s) | 773, 1004 |
| XspI | CTAG | 4 cut(s) | 1092, 1418, 1607, 1908 |
| ZraI | GACGTC | 1 cut(s) | 178 |