Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11920 |
| fragaria_vesca | FvH4_4g36430 |
| malus_domestica | MD13G1009300.v1.1 MD16G1007300.v1.1 |
| prunus_persica | Prupe.1G343400_v2.0.a1 |
| pyrus_communis | pycom13g00790 pycom16g00690 |
| rosa_chinensis | RchiOBHm_Chr4g0446191 |
| rosa_laevigata | RLG00000005684 |
| rosa_multiflora | Rmu_sc0009254.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00386580 |
| rosa_rugosa | Rorug04G0368300 |
| rosa_samantha | Rh4AG430300 Rh4BG439600 Rh4CG457000 Rh4DG438200 |
| rosa_wichuraiana | Rw4G036750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 188, 745 |
| AatII | GACGTC | 1 cut(s) | 192 |
| Acc36I | ACCTGC | 1 cut(s) | 1913 |
| AccB1I | GGYRCC | 3 cut(s) | 325, 754, 1314 |
| AccI | GTMKAC | 1 cut(s) | 699 |
| AccII | CGCG | 1 cut(s) | 878 |
| AccIII | TCCGGA | 2 cut(s) | 426, 651 |
| AcoI | YGGCCR | 2 cut(s) | 1063, 1255 |
| AcsI | RAATTY | 4 cut(s) | 389, 805, 1352, 1369 |
| AcuI | CTGAAG | 1 cut(s) | 1269 |
| AcvI | CACGTG | 1 cut(s) | 232 |
| AcyI | GRCGYC | 3 cut(s) | 189, 1315, 1486 |
| AdeI | CACNNNGTG | 1 cut(s) | 1496 |
| AfaI | GTAC | 3 cut(s) | 745, 1364, 1448 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 77, 413, 633, 896, 1072 |
| AgeI | ACCGGT | 1 cut(s) | 740 |
| AgsI | TTSAA | 9 cut(s) | 511, 664, 772, 844, 1145, 1379, 1406, 1441, 1855 |
| AjiI | CACGTC | 1 cut(s) | 1123 |
| AjnI | CCWGG | 3 cut(s) | 168, 331, 620 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1173, 1205 |
| Alw21I | GWGCWC | 1 cut(s) | 231 |
| Alw26I | GTCTC | 4 cut(s) | 566, 599, 1594, 1632 |
| Ama87I | CYCGRG | 3 cut(s) | 20, 320, 911 |
| Aor13HI | TCCGGA | 2 cut(s) | 426, 651 |
| AoxI | GGCC | 4 cut(s) | 334, 541, 1063, 1255 |
| ApeKI | GCWGC | 4 cut(s) | 155, 580, 1244, 1769 |
| ApoI | RAATTY | 4 cut(s) | 389, 805, 1352, 1369 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 476, 508, 577, 609 |
| AseI | ATTAAT | 1 cut(s) | 15 |
| AsiGI | ACCGGT | 1 cut(s) | 740 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 782, 1013 |
| AspLEI | GCGC | 3 cut(s) | 802, 880, 1317 |
| AspS9I | GGNCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| AsuC2I | CCSGG | 2 cut(s) | 215, 635 |
| AsuHPI | GGTGA | 8 cut(s) | 28, 568, 601, 1258, 1379, 1728, 1816, 1958 |
| AsuNHI | GCTAGC | 1 cut(s) | 1426 |
| AvaI | CYCGRG | 3 cut(s) | 20, 320, 911 |
| AvaII | GGWCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| BalI | TGGCCA | 1 cut(s) | 1257 |
| BamHI | GGATCC | 4 cut(s) | 4, 288, 1214, 1893 |
| BanI | GGYRCC | 3 cut(s) | 325, 754, 1314 |
| BanII | GRGCYC | 1 cut(s) | 1236 |
| BbrPI | CACGTG | 1 cut(s) | 232 |
| Bbv12I | GWGCWC | 1 cut(s) | 231 |
| BbvCI | CCTCAGC | 1 cut(s) | 812 |
| BbvI | GCAGC | 4 cut(s) | 167, 592, 1256, 1781 |
| BccI | CCATC | 4 cut(s) | 724, 1024, 1792, 1943 |
| BceAI | ACGGC | 4 cut(s) | 193, 227, 660, 1050 |
| BciT130I | CCWGG | 3 cut(s) | 170, 333, 622 |
| BciVI | GTATCC | 1 cut(s) | 22 |
| BcnI | CCSGG | 2 cut(s) | 215, 635 |
| BcoDI | GTCTC | 4 cut(s) | 566, 599, 1594, 1632 |
| BfaI | CTAG | 4 cut(s) | 1101, 1427, 1616, 1917 |
| BfmI | CTRYAG | 2 cut(s) | 1242, 1767 |
| BfoI | RGCGCY | 2 cut(s) | 803, 1318 |
| BfuAI | ACCTGC | 1 cut(s) | 1913 |
| BfuI | GTATCC | 1 cut(s) | 22 |
| BglII | AGATCT | 1 cut(s) | 1763 |
| BisI | GCNGC | 8 cut(s) | 68, 156, 581, 823, 1024, 1245, 1645, 1770 |
| BlsI | GCNGC | 8 cut(s) | 69, 157, 582, 824, 1025, 1246, 1646, 1771 |
| Bme1390I | CCNGG | 5 cut(s) | 170, 215, 333, 622, 635 |
| Bme18I | GGWCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| BmeT110I | CYCGRG | 3 cut(s) | 20, 320, 911 |
| BmgBI | CACGTC | 1 cut(s) | 1123 |
| BmgT120I | GGNCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| BmrFI | CCNGG | 5 cut(s) | 170, 215, 333, 622, 635 |
| BmsI | GCATC | 1 cut(s) | 1590 |
| BmtI | GCTAGC | 1 cut(s) | 1430 |
| BpmI | CTGGAG | 3 cut(s) | 191, 604, 1656 |
| Bpu10I | CCTNAGC | 1 cut(s) | 812 |
| BpuEI | CTTGAG | 4 cut(s) | 446, 464, 1193, 1310 |
| BpuMI | CCSGG | 2 cut(s) | 215, 635 |
| Bsa29I | ATCGAT | 1 cut(s) | 1165 |
| BsaAI | YACGTR | 1 cut(s) | 232 |
| BsaBI | GATNNNNATC | 2 cut(s) | 941, 998 |
| BsaHI | GRCGYC | 3 cut(s) | 189, 1315, 1486 |
| BsaI | GGTCTC | 2 cut(s) | 599, 1594 |
| BsaJI | CCNNGG | 6 cut(s) | 132, 213, 321, 450, 1210, 1455 |
| BsaWI | WCCGGW | 4 cut(s) | 47, 426, 651, 740 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 431, 461 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 77, 413, 633, 896, 1072 |
| Bse118I | RCCGGY | 3 cut(s) | 406, 740, 1019 |
| Bse1I | ACTGG | 3 cut(s) | 1101, 1531, 1639 |
| Bse3DI | GCAATG | 1 cut(s) | 1705 |
| Bse8I | GATNNNNATC | 2 cut(s) | 941, 998 |
| BseAI | TCCGGA | 2 cut(s) | 426, 651 |
| BseBI | CCWGG | 3 cut(s) | 170, 333, 622 |
| BseCI | ATCGAT | 1 cut(s) | 1165 |
| BseDI | CCNNGG | 6 cut(s) | 132, 213, 321, 450, 1210, 1455 |
| BseGI | GGATG | 3 cut(s) | 423, 1581, 1803 |
| BseJI | GATNNNNATC | 2 cut(s) | 941, 998 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 77, 413, 633, 896, 1072 |
| BseMI | GCAATG | 1 cut(s) | 1705 |
| BseMII | CTCAG | 4 cut(s) | 725, 773, 803, 953 |
| BseNI | ACTGG | 3 cut(s) | 1101, 1531, 1639 |
| BseRI | GAGGAG | 3 cut(s) | 339, 439, 929 |
| BseXI | GCAGC | 4 cut(s) | 167, 592, 1256, 1781 |
| BsgI | GTGCAG | 1 cut(s) | 625 |
| Bsh1236I | CGCG | 1 cut(s) | 878 |
| Bsh1285I | CGRYCG | 1 cut(s) | 48 |
| BshFI | GGCC | 4 cut(s) | 336, 543, 1065, 1257 |
| BshNI | GGYRCC | 3 cut(s) | 325, 754, 1314 |
| BshTI | ACCGGT | 1 cut(s) | 740 |
| BshVI | ATCGAT | 1 cut(s) | 1165 |
| BsiEI | CGRYCG | 1 cut(s) | 48 |
| BsiHKAI | GWGCWC | 1 cut(s) | 231 |
| BsiHKCI | CYCGRG | 3 cut(s) | 20, 320, 911 |
| BslFI | GGGAC | 2 cut(s) | 650, 1717 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 77, 413, 633, 896, 1072 |
| BsmAI | GTCTC | 4 cut(s) | 566, 599, 1594, 1632 |
| BsmBI | CGTCTC | 1 cut(s) | 566 |
| BsmFI | GGGAC | 2 cut(s) | 650, 1717 |
| BsnI | GGCC | 4 cut(s) | 336, 543, 1065, 1257 |
| Bso31I | GGTCTC | 2 cut(s) | 599, 1594 |
| BsoBI | CYCGRG | 3 cut(s) | 20, 320, 911 |
| Bsp1286I | GDGCHC | 2 cut(s) | 231, 1236 |
| Bsp13I | TCCGGA | 2 cut(s) | 426, 651 |
| Bsp1407I | TGTACA | 1 cut(s) | 1446 |
| Bsp19I | CCATGG | 1 cut(s) | 1455 |
| BspANI | GGCC | 4 cut(s) | 336, 543, 1065, 1257 |
| BspCNI | CTCAG | 4 cut(s) | 724, 772, 804, 954 |
| BspDI | ATCGAT | 1 cut(s) | 1165 |
| BspEI | TCCGGA | 2 cut(s) | 426, 651 |
| BspFNI | CGCG | 1 cut(s) | 878 |
| BspHI | TCATGA | 1 cut(s) | 340 |
| BspMAI | CTGCAG | 2 cut(s) | 1246, 1771 |
| BspMI | ACCTGC | 1 cut(s) | 1913 |
| BspOI | GCTAGC | 1 cut(s) | 1430 |
| BspT107I | GGYRCC | 3 cut(s) | 325, 754, 1314 |
| BspTNI | GGTCTC | 2 cut(s) | 599, 1594 |
| BsrDI | GCAATG | 1 cut(s) | 1705 |
| BsrFI | RCCGGY | 3 cut(s) | 406, 740, 1019 |
| BsrGI | TGTACA | 1 cut(s) | 1446 |
| BsrI | ACTGG | 3 cut(s) | 1101, 1531, 1639 |
| BssAI | RCCGGY | 3 cut(s) | 406, 740, 1019 |
| BssECI | CCNNGG | 6 cut(s) | 132, 213, 321, 450, 1210, 1455 |
| BssNI | GRCGYC | 3 cut(s) | 189, 1315, 1486 |
| BssT1I | CCWWGG | 2 cut(s) | 132, 1455 |
| Bst2UI | CCWGG | 3 cut(s) | 170, 333, 622 |
| Bst4CI | ACNGT | 8 cut(s) | 556, 983, 1061, 1229, 1346, 1695, 1723, 1825 |
| Bst6I | CTCTTC | 3 cut(s) | 213, 425, 1811 |
| BstACI | GRCGYC | 3 cut(s) | 189, 1315, 1486 |
| BstAUI | TGTACA | 1 cut(s) | 1446 |
| BstBAI | YACGTR | 1 cut(s) | 232 |
| BstC8I | GCNNGC | 6 cut(s) | 408, 882, 1021, 1242, 1428, 1656 |
| BstDEI | CTNAG | 6 cut(s) | 711, 759, 812, 962, 1562, 1586 |
| BstDSI | CCRYGG | 1 cut(s) | 1455 |
| BstF5I | GGATG | 3 cut(s) | 423, 1581, 1803 |
| BstFNI | CGCG | 1 cut(s) | 878 |
| BstH2I | RGCGCY | 2 cut(s) | 803, 1318 |
| BstHHI | GCGC | 3 cut(s) | 802, 880, 1317 |
| BstMAI | GTCTC | 4 cut(s) | 566, 599, 1594, 1632 |
| BstMCI | CGRYCG | 1 cut(s) | 48 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 161, 316, 475, 586, 639, 808, 886, 967, 1020 |
| BstNI | CCWGG | 3 cut(s) | 170, 333, 622 |
| BstNSI | RCATGY | 2 cut(s) | 406, 1469 |
| BstSCI | CCNGG | 5 cut(s) | 168, 213, 331, 620, 633 |
| BstSFI | CTRYAG | 2 cut(s) | 1242, 1767 |
| BstUI | CGCG | 1 cut(s) | 878 |
| BstV1I | GCAGC | 4 cut(s) | 167, 592, 1256, 1781 |
| BstX2I | RGATCY | 6 cut(s) | 4, 288, 1214, 1511, 1763, 1893 |
| BstYI | RGATCY | 6 cut(s) | 4, 288, 1214, 1511, 1763, 1893 |
| Bsu15I | ATCGAT | 1 cut(s) | 1165 |
| BsuI | GTATCC | 1 cut(s) | 22 |
| BsuRI | GGCC | 4 cut(s) | 336, 543, 1065, 1257 |
| BsuTUI | ATCGAT | 1 cut(s) | 1165 |
| BtgI | CCRYGG | 1 cut(s) | 1455 |
| BtrI | CACGTC | 1 cut(s) | 1123 |
| BtsCI | GGATG | 3 cut(s) | 423, 1581, 1803 |
| BtsIMutI | CAGTG | 2 cut(s) | 1351, 1632 |
| BveI | ACCTGC | 1 cut(s) | 1913 |
| Cac8I | GCNNGC | 6 cut(s) | 408, 882, 1021, 1242, 1428, 1656 |
| CciI | TCATGA | 1 cut(s) | 340 |
| CfoI | GCGC | 3 cut(s) | 802, 880, 1317 |
| Cfr10I | RCCGGY | 3 cut(s) | 406, 740, 1019 |
| Cfr13I | GGNCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| ClaI | ATCGAT | 1 cut(s) | 1165 |
| CpoI | CGGWCCG | 1 cut(s) | 649 |
| CseI | GACGC | 2 cut(s) | 884, 1475 |
| Csp6I | GTAC | 3 cut(s) | 744, 1363, 1447 |
| CspAI | ACCGGT | 1 cut(s) | 740 |
| CspI | CGGWCCG | 1 cut(s) | 649 |
| CviAII | CATG | 8 cut(s) | 302, 341, 403, 1178, 1276, 1456, 1466, 1993 |
| CviQI | GTAC | 3 cut(s) | 744, 1363, 1447 |
| DdeI | CTNAG | 6 cut(s) | 711, 759, 812, 962, 1562, 1586 |
| DinI | GGCGCC | 1 cut(s) | 1316 |
| DraIII | CACNNNGTG | 1 cut(s) | 1496 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 188, 745 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 188, 745 |
| EaeI | YGGCCR | 2 cut(s) | 1063, 1255 |
| Eam1104I | CTCTTC | 3 cut(s) | 213, 425, 1811 |
| EarI | CTCTTC | 3 cut(s) | 213, 425, 1811 |
| EciI | GGCGGA | 1 cut(s) | 941 |
| Eco130I | CCWWGG | 2 cut(s) | 132, 1455 |
| Eco24I | GRGCYC | 1 cut(s) | 1236 |
| Eco31I | GGTCTC | 2 cut(s) | 599, 1594 |
| Eco47I | GGWCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| Eco57I | CTGAAG | 1 cut(s) | 1269 |
| Eco72I | CACGTG | 1 cut(s) | 232 |
| Eco88I | CYCGRG | 3 cut(s) | 20, 320, 911 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1039, 1955 |
| EcoRI | GAATTC | 2 cut(s) | 805, 1352 |
| EcoRII | CCWGG | 3 cut(s) | 168, 331, 620 |
| EcoT14I | CCWWGG | 2 cut(s) | 132, 1455 |
| EcoT38I | GRGCYC | 1 cut(s) | 1236 |
| EgeI | GGCGCC | 1 cut(s) | 1316 |
| EheI | GGCGCC | 1 cut(s) | 1316 |
| ErhI | CCWWGG | 2 cut(s) | 132, 1455 |
| Esp3I | CGTCTC | 1 cut(s) | 566 |
| FaeI | CATG | 8 cut(s) | 305, 344, 406, 1181, 1279, 1459, 1469, 1996 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 998, 1030 |
| FaqI | GGGAC | 2 cut(s) | 650, 1717 |
| FatI | CATG | 8 cut(s) | 301, 340, 402, 1177, 1275, 1455, 1465, 1992 |
| FauI | CCCGC | 1 cut(s) | 889 |
| FblI | GTMKAC | 1 cut(s) | 699 |
| Fnu4HI | GCNGC | 8 cut(s) | 68, 156, 581, 823, 1024, 1245, 1645, 1770 |
| FokI | GGATG | 3 cut(s) | 410, 1568, 1810 |
| FriOI | GRGCYC | 1 cut(s) | 1236 |
| Fsp4HI | GCNGC | 8 cut(s) | 68, 156, 581, 823, 1024, 1245, 1645, 1770 |
| FspBI | CTAG | 4 cut(s) | 1101, 1427, 1616, 1917 |
| GlaI | GCGC | 3 cut(s) | 801, 879, 1316 |
| GluI | GCNGC | 8 cut(s) | 68, 156, 581, 823, 1024, 1245, 1645, 1770 |
| GsuI | CTGGAG | 3 cut(s) | 191, 604, 1656 |
| HaeII | RGCGCY | 2 cut(s) | 803, 1318 |
| HaeIII | GGCC | 4 cut(s) | 336, 543, 1065, 1257 |
| HgaI | GACGC | 2 cut(s) | 884, 1475 |
| HhaI | GCGC | 3 cut(s) | 802, 880, 1317 |
| Hin1I | GRCGYC | 3 cut(s) | 189, 1315, 1486 |
| Hin1II | CATG | 8 cut(s) | 305, 344, 406, 1181, 1279, 1459, 1469, 1996 |
| Hin6I | GCGC | 3 cut(s) | 800, 878, 1315 |
| HinP1I | GCGC | 3 cut(s) | 800, 878, 1315 |
| HincII | GTYRAC | 1 cut(s) | 700 |
| HindII | GTYRAC | 1 cut(s) | 700 |
| HinfI | GANTC | 8 cut(s) | 62, 221, 675, 681, 973, 1167, 1292, 1672 |
| HphI | GGTGA | 8 cut(s) | 28, 568, 601, 1258, 1379, 1728, 1816, 1958 |
| Hpy166II | GTNNAC | 7 cut(s) | 400, 700, 895, 1070, 1396, 1490, 1807 |
| Hpy8I | GTNNAC | 7 cut(s) | 400, 700, 895, 1070, 1396, 1490, 1807 |
| HpyAV | CCTTC | 7 cut(s) | 347, 363, 622, 838, 1083, 1353, 1441 |
| HpyCH4III | ACNGT | 8 cut(s) | 556, 983, 1061, 1229, 1346, 1695, 1723, 1825 |
| HpyCH4IV | ACGT | 7 cut(s) | 189, 231, 369, 696, 702, 746, 1122 |
| HpyCH4V | TGCA | 6 cut(s) | 305, 642, 1244, 1469, 1698, 1769 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 161, 316, 475, 586, 639, 808, 886, 967, 1020 |
| HpyF3I | CTNAG | 6 cut(s) | 711, 759, 812, 962, 1562, 1586 |
| HpySE526I | ACGT | 7 cut(s) | 189, 231, 369, 696, 702, 746, 1122 |
| Hsp92I | GRCGYC | 3 cut(s) | 189, 1315, 1486 |
| Hsp92II | CATG | 8 cut(s) | 305, 344, 406, 1181, 1279, 1459, 1469, 1996 |
| HspAI | GCGC | 3 cut(s) | 800, 878, 1315 |
| KasI | GGCGCC | 1 cut(s) | 1314 |
| Kpn2I | TCCGGA | 2 cut(s) | 426, 651 |
| KroI | GCCGGC | 2 cut(s) | 406, 1019 |
| KroNI | GCCGGC | 2 cut(s) | 408, 1021 |
| LmnI | GCTCC | 6 cut(s) | 152, 214, 226, 315, 577, 654 |
| Lsp1109I | GCAGC | 4 cut(s) | 167, 592, 1256, 1781 |
| LweI | GCATC | 1 cut(s) | 1590 |
| MaeI | CTAG | 4 cut(s) | 1101, 1427, 1616, 1917 |
| MaeII | ACGT | 7 cut(s) | 189, 231, 369, 696, 702, 746, 1122 |
| MaeIII | GTNAC | 5 cut(s) | 244, 520, 550, 1340, 1565 |
| MfeI | CAATTG | 1 cut(s) | 628 |
| MflI | RGATCY | 6 cut(s) | 4, 288, 1214, 1511, 1763, 1893 |
| MhlI | GDGCHC | 2 cut(s) | 231, 1236 |
| MlsI | TGGCCA | 1 cut(s) | 1257 |
| MluNI | TGGCCA | 1 cut(s) | 1257 |
| Mly113I | GGCGCC | 1 cut(s) | 1315 |
| MlyI | GAGTC | 4 cut(s) | 71, 230, 669, 1301 |
| MmeI | TCCRAC | 5 cut(s) | 204, 319, 584, 1035, 1522 |
| Mox20I | TGGCCA | 1 cut(s) | 1257 |
| MreI | CGCCGGCG | 1 cut(s) | 1019 |
| MroI | TCCGGA | 2 cut(s) | 426, 651 |
| MroNI | GCCGGC | 2 cut(s) | 406, 1019 |
| MroXI | GAANNNNTTC | 2 cut(s) | 782, 1013 |
| MscI | TGGCCA | 1 cut(s) | 1257 |
| MseI | TTAA | 6 cut(s) | 15, 138, 257, 1047, 1760, 1785 |
| Msp20I | TGGCCA | 1 cut(s) | 1257 |
| MspA1I | CMGCKG | 3 cut(s) | 822, 838, 1247 |
| MspR9I | CCNGG | 5 cut(s) | 170, 215, 333, 622, 635 |
| MunI | CAATTG | 1 cut(s) | 628 |
| MvaI | CCWGG | 3 cut(s) | 170, 333, 622 |
| MvnI | CGCG | 1 cut(s) | 878 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 161, 316, 475, 586, 639, 808, 886, 967, 1020 |
| NaeI | GCCGGC | 2 cut(s) | 408, 1021 |
| NarI | GGCGCC | 1 cut(s) | 1315 |
| NciI | CCSGG | 2 cut(s) | 215, 635 |
| NcoI | CCATGG | 1 cut(s) | 1455 |
| NgoMIV | GCCGGC | 2 cut(s) | 406, 1019 |
| NheI | GCTAGC | 1 cut(s) | 1426 |
| NlaIII | CATG | 8 cut(s) | 305, 344, 406, 1181, 1279, 1459, 1469, 1996 |
| NmeAIII | GCCGAG | 1 cut(s) | 431 |
| NmuCI | GTSAC | 1 cut(s) | 550 |
| NspI | RCATGY | 2 cut(s) | 406, 1469 |
| PaeR7I | CTCGAG | 1 cut(s) | 911 |
| PagI | TCATGA | 1 cut(s) | 340 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 183, 1023 |
| PdiI | GCCGGC | 2 cut(s) | 408, 1021 |
| PdmI | GAANNNNTTC | 2 cut(s) | 782, 1013 |
| PfeI | GAWTC | 4 cut(s) | 681, 973, 1167, 1672 |
| PflFI | GACNNNGTC | 2 cut(s) | 188, 1708 |
| PinAI | ACCGGT | 1 cut(s) | 740 |
| PkrI | GCNGC | 8 cut(s) | 69, 157, 582, 824, 1025, 1246, 1646, 1771 |
| PleI | GAGTC | 4 cut(s) | 70, 229, 669, 1300 |
| PluTI | GGCGCC | 1 cut(s) | 1318 |
| PmaCI | CACGTG | 1 cut(s) | 232 |
| PmlI | CACGTG | 1 cut(s) | 232 |
| PpsI | GAGTC | 4 cut(s) | 70, 229, 669, 1300 |
| Ppu21I | YACGTR | 1 cut(s) | 232 |
| PpuMI | RGGWCCY | 2 cut(s) | 1039, 1955 |
| PshBI | ATTAAT | 1 cut(s) | 15 |
| Psp5II | RGGWCCY | 2 cut(s) | 1039, 1955 |
| Psp6I | CCWGG | 3 cut(s) | 168, 331, 620 |
| PspCI | CACGTG | 1 cut(s) | 232 |
| PspGI | CCWGG | 3 cut(s) | 168, 331, 620 |
| PspPI | GGNCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| PspPPI | RGGWCCY | 2 cut(s) | 1039, 1955 |
| PstI | CTGCAG | 2 cut(s) | 1246, 1771 |
| PsuI | RGATCY | 6 cut(s) | 4, 288, 1214, 1511, 1763, 1893 |
| PsyI | GACNNNGTC | 2 cut(s) | 188, 1708 |
| PvuII | CAGCTG | 1 cut(s) | 1247 |
| RsaI | GTAC | 3 cut(s) | 745, 1364, 1448 |
| RsaNI | GTAC | 3 cut(s) | 744, 1363, 1447 |
| Rsr2I | CGGWCCG | 1 cut(s) | 649 |
| RsrII | CGGWCCG | 1 cut(s) | 649 |
| SalI | GTCGAC | 1 cut(s) | 698 |
| SaqAI | TTAA | 6 cut(s) | 15, 138, 257, 1047, 1760, 1785 |
| SatI | GCNGC | 8 cut(s) | 68, 156, 581, 823, 1024, 1245, 1645, 1770 |
| Sau96I | GGNCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| SchI | GAGTC | 4 cut(s) | 71, 230, 669, 1301 |
| ScrFI | CCNGG | 5 cut(s) | 170, 215, 333, 622, 635 |
| SduI | GDGCHC | 2 cut(s) | 231, 1236 |
| SfaNI | GCATC | 1 cut(s) | 1590 |
| SfcI | CTRYAG | 2 cut(s) | 1242, 1767 |
| SfoI | GGCGCC | 1 cut(s) | 1316 |
| Sfr274I | CTCGAG | 1 cut(s) | 911 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1019 |
| SgrDI | CGTCGACG | 1 cut(s) | 698 |
| SinI | GGWCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| SlaI | CTCGAG | 1 cut(s) | 911 |
| SmlI | CTYRAG | 5 cut(s) | 461, 479, 911, 1172, 1289 |
| SmoI | CTYRAG | 5 cut(s) | 461, 479, 911, 1172, 1289 |
| SspDI | GGCGCC | 1 cut(s) | 1314 |
| SspMI | CTAG | 4 cut(s) | 1101, 1427, 1616, 1917 |
| StyD4I | CCNGG | 5 cut(s) | 168, 213, 331, 620, 633 |
| StyI | CCWWGG | 2 cut(s) | 132, 1455 |
| TaaI | ACNGT | 8 cut(s) | 556, 983, 1061, 1229, 1346, 1695, 1723, 1825 |
| TaiI | ACGT | 7 cut(s) | 192, 234, 372, 699, 705, 749, 1125 |
| TaqI | TCGA | 5 cut(s) | 699, 860, 912, 1165, 1749 |
| TatI | WGTACW | 1 cut(s) | 1446 |
| TauI | GCSGC | 4 cut(s) | 70, 825, 1026, 1647 |
| TfiI | GAWTC | 4 cut(s) | 681, 973, 1167, 1672 |
| Tru1I | TTAA | 6 cut(s) | 15, 138, 257, 1047, 1760, 1785 |
| Tru9I | TTAA | 6 cut(s) | 15, 138, 257, 1047, 1760, 1785 |
| TscAI | CASTG | 2 cut(s) | 1351, 1639 |
| TseFI | GTSAC | 1 cut(s) | 550 |
| TseI | GCWGC | 4 cut(s) | 155, 580, 1244, 1769 |
| Tsp45I | GTSAC | 1 cut(s) | 550 |
| TspDTI | ATGAA | 8 cut(s) | 329, 521, 1004, 1010, 1102, 1106, 1164, 1194 |
| TspGWI | ACGGA | 1 cut(s) | 590 |
| TspRI | CASTG | 2 cut(s) | 1351, 1639 |
| Tth111I | GACNNNGTC | 2 cut(s) | 188, 1708 |
| VpaK11BI | GGWCC | 9 cut(s) | 624, 649, 738, 928, 979, 1039, 1909, 1955, 1989 |
| VspI | ATTAAT | 1 cut(s) | 15 |
| XapI | RAATTY | 4 cut(s) | 389, 805, 1352, 1369 |
| XceI | RCATGY | 2 cut(s) | 406, 1469 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1538 |
| XhoI | CTCGAG | 1 cut(s) | 911 |
| XmiI | GTMKAC | 1 cut(s) | 699 |
| XmnI | GAANNNNTTC | 2 cut(s) | 782, 1013 |
| XspI | CTAG | 4 cut(s) | 1101, 1427, 1616, 1917 |
| ZraI | GACGTC | 1 cut(s) | 190 |