Rh4CG457000

Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0014231
Physical Location & Seq
Forward (+)
68891125 .. 68895373
4249 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG457000.1

Sequence Viewer

Length: 2007 bp
ATGGATCCCGAAATTAATCTCGGGGAGGTTACAATCACCAAAGCGACCGGAAAACTAAACGAGTCGCCGCCGGAGAACGGGATTGTATCAGAAACTCCTTCCAGAGAGAAGAAAACAAATGATAATGGCGTAGCCAAGGTTAAAATTGGGAATGGAGCAGCAGAAGCAAACCTGGAGAACGGCGACGACGACGTCTTTTTTACTCCAATGGCTCCCCCGGAAGAGTCGGAGCACGTGAAATTAGCCGTTACGCCCAAATTAACAGAAGAGGCGGAACCAGAGGAAGCAGGGATCCTCCAACCTCATGCAAAGCTCCCGAAGCCCGAGGCACCGCCTGGCCTTCATGACCCTCCTCCTTCCCCCAACGACGACGTTTCGGACAACAACCAGAAATTCGGCGTGGACATGCCGGCGATAGGGAAGCTCATCCGGAAGAGAAGCAACGATCTCTCCTCGGCGTTCCTGAAGACGCTATCGTCGCTCAAGGACAACAATTTCGCCGACGAGTTTCTGAAGCCGAATGTAACCGAGTTCCATCTCTCCGGCCTCAAAGTGACGGTGAAGCACAAGAGCGAGACGGAGCAGCAAACGCAGAGTCTCAAAGGTCGGATCACCTTCTTCTCCAGGTCCAATTGCCGGGACTGCACGGCGGTCCGGAGCTTTTTCAAAGAGAAAGGACTCAGATTCGTCGAGATAAACGTCGACGTTTATCCTCAGAGAGAGCAAGAGCTGATCGAGAGGACCGGTACGTCGTCGGTGCCTCAGGTTTTCTTCAACGAGAAGCTATTCGGCGGTTTGGTGGCGCTGAATTCGCTGAGGAACAGCGGCGAGTTTGACCAGCGGTTGAAGGAAATGATCGGGTCGAAATGCCCCGACGACGCGCCCGCTTCGCCTGTTTACGGGTTTGATGATCTCGAGGAGGAATTGACGGACCAGATGATAGGGATCGTGAGGGTGTTGAGGCTGAGATTGCCGATTCAGGACCGTCTGATGAAGATGAAGATCGTGAAGAACTGCTTCGCCGGCGGCGAGATGGTGGAGGTCCTCATTCAGCAGTTGGACTGTGGCCGTAAACAGGCGGTTGAGATTGGAAGGCAACTGGCAAGGAGGCACTTCATTCATCACGTCTTTGGAGAAAATGAGTTTGAAGATGGAAACCATTTTTACCGATTCCTTGAGCATGAACCATTTATCCCCAAATGCTATAATTTCCGAGGATCCATAAATGACTGTGAGCCCAAGCCTGCAGCTGAAGTTGGCCAAAGGCTCACCAAGATCATGTCTGCCATACTTGAGTCCTATGCCTCTGATGACAGGTGCCTACTTGATTACATTGGCATAAGCAACAGTGAGGAATTCCGAAGGTACATAAATTTGGTTCAAGAGCTTCACCGAGTAAACCTTTTTGAACTCTCGCCAAATGAGAGGCTAGCCTTCTTCTTGAACCTGTACAATGCCATGGTCATACATGCAGTTATCAGGGTAGGGCGTCCAAAAGGTGTCATTGAAAGGAGATCCTTTTACAATGACTTCCAGTATATAGTTGGAGGTTATTCTTATTCCCTTAGTAACATCGAAAATGGCATCCTTAGAAACAACAGGAGACCTCCTTATTCCCTAGTCAAGCCATTTGGCACTGGAGACAGCCGCATAGAGCTTGCTTGTGCTAAAGTGAATCCAATAATCCACTTTGGACTGTGCAATGGGACAAGGTCGAGCCCGACAGTAAGGTTCTTCTCACCCCAAGTAATCGAAGCTGAATTAAGATCTGCAGCAAGAGAGTTCTTTAAGAGTGGTGGAATGGAGGTGAACTTGGAGAAGAGGACTGTGTATCTCACCCAAATCATCAAATGGTTCAATAATGATTTTGGACAAGATAAAGACATTTTAGAGTGGATCCTCAATTACTTGGATCCAACTAGAGCAGGTCTTTTGACACATTTGTTGGGTGATGGAGGACCTATACATATTTCTTACCAGAACTATGATTGGTCCATGAACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DEP DUF547 Glutaredoxin

Protein Analysis

668

Amino Acids

75.53

Weight (kDa)

5.8

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 204 - 262 2.8e-15 Glutaredoxin
DEP PF00610 324 - 391 3.6e-19 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
DUF547 PF04784 470 - 595 4.7e-36 Protein of unknown function, DUF547
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014231)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11920
fragaria_vesca FvH4_4g36430
malus_domestica MD13G1009300.v1.1 MD16G1007300.v1.1
prunus_persica Prupe.1G343400_v2.0.a1
pyrus_communis pycom13g00790 pycom16g00690
rosa_chinensis RchiOBHm_Chr4g0446191
rosa_laevigata RLG00000005684
rosa_multiflora Rmu_sc0009254.1_g000004
rosa_roxburghii Rroxscaffold_5G00386580
rosa_rugosa Rorug04G0368300
rosa_samantha Rh4AG430300 Rh4BG439600 Rh4CG457000 Rh4DG438200
rosa_wichuraiana Rw4G036750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 191, 475, 748
AatII GACGTC 1 cut(s) 195
Acc36I ACCTGC 1 cut(s) 1916
AccB1I GGYRCC 3 cut(s) 328, 757, 1317
AccI GTMKAC 1 cut(s) 702
AccII CGCG 1 cut(s) 881
AccIII TCCGGA 2 cut(s) 429, 654
AcoI YGGCCR 2 cut(s) 1066, 1258
AcsI RAATTY 4 cut(s) 392, 808, 1355, 1372
AcuI CTGAAG 3 cut(s) 485, 533, 1272
AcvI CACGTG 1 cut(s) 235
AcyI GRCGYC 2 cut(s) 192, 1489
AfaI GTAC 3 cut(s) 748, 1367, 1451
AfiI CCNNNNNNNGG 5 cut(s) 77, 416, 636, 899, 1075
AgeI ACCGGT 1 cut(s) 743
AgsI TTSAA 9 cut(s) 667, 775, 847, 1148, 1382, 1409, 1444, 1508, 1858
AjiI CACGTC 1 cut(s) 1126
AjnI CCWGG 3 cut(s) 171, 334, 623
AloI GAACNNNNNNTCC 2 cut(s) 1176, 1208
AluBI AGCT 9 cut(s) 313, 424, 660, 730, 784, 1250, 1387, 1657, 1757
AluI AGCT 9 cut(s) 313, 424, 660, 730, 784, 1250, 1387, 1657, 1757
Alw21I GWGCWC 1 cut(s) 234
Alw26I GTCTC 4 cut(s) 569, 602, 1597, 1635
Ama87I CYCGRG 3 cut(s) 20, 323, 914
Aor13HI TCCGGA 2 cut(s) 429, 654
AoxI GGCC 4 cut(s) 337, 544, 1066, 1258
ApeKI GCWGC 4 cut(s) 158, 583, 1247, 1772
ApoI RAATTY 4 cut(s) 392, 808, 1355, 1372
ArsI GACNNNNNNTTYG 4 cut(s) 479, 511, 580, 612
AseI ATTAAT 1 cut(s) 15
AsiGI ACCGGT 1 cut(s) 743
Asp700I GAANNNNTTC 2 cut(s) 785, 1016
AspLEI GCGC 2 cut(s) 805, 883
AspS9I GGNCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
AsuC2I CCSGG 2 cut(s) 218, 638
AsuHPI GGTGA 9 cut(s) 28, 571, 604, 1261, 1382, 1731, 1819, 1828, 1961
AsuNHI GCTAGC 1 cut(s) 1429
AvaI CYCGRG 3 cut(s) 20, 323, 914
AvaII GGWCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
AxyI CCTNAGG 1 cut(s) 762
BalI TGGCCA 1 cut(s) 1260
BamHI GGATCC 5 cut(s) 4, 291, 1217, 1896, 1912
BanI GGYRCC 3 cut(s) 328, 757, 1317
BanII GRGCYC 2 cut(s) 1239, 1721
BbrPI CACGTG 1 cut(s) 235
BbsI GAAGAC 1 cut(s) 473
Bbv12I GWGCWC 1 cut(s) 234
BbvCI CCTCAGC 1 cut(s) 815
BbvI GCAGC 4 cut(s) 170, 595, 1259, 1784
BccI CCATC 4 cut(s) 543, 1027, 1145, 1946
BceAI ACGGC 4 cut(s) 196, 230, 663, 1053
BciT130I CCWGG 3 cut(s) 173, 336, 625
BcnI CCSGG 2 cut(s) 218, 638
BcoDI GTCTC 4 cut(s) 569, 602, 1597, 1635
BfaI CTAG 3 cut(s) 1430, 1619, 1920
BfmI CTRYAG 2 cut(s) 1245, 1770
BfoI RGCGCY 1 cut(s) 806
BfuAI ACCTGC 1 cut(s) 1916
BglII AGATCT 1 cut(s) 1766
BisI GCNGC 8 cut(s) 68, 159, 584, 826, 1027, 1248, 1648, 1773
BlsI GCNGC 8 cut(s) 69, 160, 585, 827, 1028, 1249, 1649, 1774
Bme1390I CCNGG 5 cut(s) 173, 218, 336, 625, 638
Bme18I GGWCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
BmeT110I CYCGRG 3 cut(s) 20, 323, 914
BmgBI CACGTC 1 cut(s) 1126
BmgT120I GGNCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
BmrFI CCNGG 5 cut(s) 173, 218, 336, 625, 638
BmsI GCATC 1 cut(s) 1593
BmtI GCTAGC 1 cut(s) 1433
BpiI GAAGAC 1 cut(s) 473
BpmI CTGGAG 3 cut(s) 194, 607, 1659
Bpu10I CCTNAGC 1 cut(s) 815
BpuEI CTTGAG 3 cut(s) 467, 1196, 1313
BpuMI CCSGG 2 cut(s) 218, 638
BsaAI YACGTR 1 cut(s) 235
BsaBI GATNNNNATC 2 cut(s) 944, 1001
BsaHI GRCGYC 2 cut(s) 192, 1489
BsaI GGTCTC 1 cut(s) 1597
BsaJI CCNNGG 6 cut(s) 135, 216, 324, 453, 1213, 1458
BsaWI WCCGGW 4 cut(s) 47, 429, 654, 743
BsaXI ACNNNNNCTCC 2 cut(s) 434, 464
Bsc4I CCNNNNNNNGG 5 cut(s) 77, 416, 636, 899, 1075
Bse118I RCCGGY 3 cut(s) 409, 743, 1022
Bse1I ACTGG 3 cut(s) 1104, 1534, 1642
Bse21I CCTNAGG 1 cut(s) 762
Bse3DI GCAATG 1 cut(s) 1708
Bse8I GATNNNNATC 2 cut(s) 944, 1001
BseAI TCCGGA 2 cut(s) 429, 654
BseBI CCWGG 3 cut(s) 173, 336, 625
BseDI CCNNGG 6 cut(s) 135, 216, 324, 453, 1213, 1458
BseGI GGATG 2 cut(s) 426, 1584
BseJI GATNNNNATC 2 cut(s) 944, 1001
BseLI CCNNNNNNNGG 5 cut(s) 77, 416, 636, 899, 1075
BseMI GCAATG 1 cut(s) 1708
BseMII CTCAG 5 cut(s) 694, 728, 776, 806, 956
BseNI ACTGG 3 cut(s) 1104, 1534, 1642
BseRI GAGGAG 3 cut(s) 342, 442, 932
BseXI GCAGC 4 cut(s) 170, 595, 1259, 1784
BsgI GTGCAG 1 cut(s) 628
Bsh1236I CGCG 1 cut(s) 881
Bsh1285I CGRYCG 1 cut(s) 48
BshFI GGCC 4 cut(s) 339, 546, 1068, 1260
BshNI GGYRCC 3 cut(s) 328, 757, 1317
BshTI ACCGGT 1 cut(s) 743
BsiEI CGRYCG 1 cut(s) 48
BsiHKAI GWGCWC 1 cut(s) 234
BsiHKCI CYCGRG 3 cut(s) 20, 323, 914
BslFI GGGAC 2 cut(s) 653, 1720
BslI CCNNNNNNNGG 5 cut(s) 77, 416, 636, 899, 1075
BsmAI GTCTC 4 cut(s) 569, 602, 1597, 1635
BsmBI CGTCTC 1 cut(s) 569
BsmFI GGGAC 2 cut(s) 653, 1720
BsnI GGCC 4 cut(s) 339, 546, 1068, 1260
Bso31I GGTCTC 1 cut(s) 1597
BsoBI CYCGRG 3 cut(s) 20, 323, 914
Bsp1286I GDGCHC 3 cut(s) 234, 1239, 1721
Bsp13I TCCGGA 2 cut(s) 429, 654
Bsp1407I TGTACA 1 cut(s) 1449
Bsp19I CCATGG 1 cut(s) 1458
BspANI GGCC 4 cut(s) 339, 546, 1068, 1260
BspCNI CTCAG 5 cut(s) 693, 727, 775, 807, 957
BspEI TCCGGA 2 cut(s) 429, 654
BspFNI CGCG 1 cut(s) 881
BspHI TCATGA 1 cut(s) 343
BspMAI CTGCAG 2 cut(s) 1249, 1774
BspMI ACCTGC 1 cut(s) 1916
BspOI GCTAGC 1 cut(s) 1433
BspT107I GGYRCC 3 cut(s) 328, 757, 1317
BspTNI GGTCTC 1 cut(s) 1597
BsrDI GCAATG 1 cut(s) 1708
BsrFI RCCGGY 3 cut(s) 409, 743, 1022
BsrGI TGTACA 1 cut(s) 1449
BsrI ACTGG 3 cut(s) 1104, 1534, 1642
BssAI RCCGGY 3 cut(s) 409, 743, 1022
BssECI CCNNGG 6 cut(s) 135, 216, 324, 453, 1213, 1458
BssNI GRCGYC 2 cut(s) 192, 1489
BssT1I CCWWGG 2 cut(s) 135, 1458
Bst2UI CCWGG 3 cut(s) 173, 336, 625
Bst4CI ACNGT 8 cut(s) 559, 986, 1064, 1232, 1349, 1698, 1726, 1828
Bst6I CTCTTC 4 cut(s) 216, 261, 428, 1814
BstACI GRCGYC 2 cut(s) 192, 1489
BstAUI TGTACA 1 cut(s) 1449
BstBAI YACGTR 1 cut(s) 235
BstC8I GCNNGC 6 cut(s) 411, 885, 1024, 1245, 1431, 1659
BstDEI CTNAG 7 cut(s) 680, 714, 762, 815, 965, 1565, 1589
BstDSI CCRYGG 1 cut(s) 1458
BstF5I GGATG 2 cut(s) 426, 1584
BstFNI CGCG 1 cut(s) 881
BstH2I RGCGCY 1 cut(s) 806
BstHHI GCGC 2 cut(s) 805, 883
BstMAI GTCTC 4 cut(s) 569, 602, 1597, 1635
BstMCI CGRYCG 1 cut(s) 48
BstMWI GCNNNNNNNGC 9 cut(s) 164, 319, 478, 589, 642, 811, 889, 970, 1023
BstNI CCWGG 3 cut(s) 173, 336, 625
BstNSI RCATGY 2 cut(s) 409, 1472
BstSCI CCNGG 5 cut(s) 171, 216, 334, 623, 636
BstSFI CTRYAG 2 cut(s) 1245, 1770
BstUI CGCG 1 cut(s) 881
BstV1I GCAGC 4 cut(s) 170, 595, 1259, 1784
BstV2I GAAGAC 1 cut(s) 473
BstX2I RGATCY 7 cut(s) 4, 291, 1217, 1514, 1766, 1896, 1912
BstYI RGATCY 7 cut(s) 4, 291, 1217, 1514, 1766, 1896, 1912
Bsu36I CCTNAGG 1 cut(s) 762
BsuRI GGCC 4 cut(s) 339, 546, 1068, 1260
BtgI CCRYGG 1 cut(s) 1458
BtrI CACGTC 1 cut(s) 1126
BtsCI GGATG 2 cut(s) 426, 1584
BtsIMutI CAGTG 2 cut(s) 1354, 1635
BveI ACCTGC 1 cut(s) 1916
Cac8I GCNNGC 6 cut(s) 411, 885, 1024, 1245, 1431, 1659
CciI TCATGA 1 cut(s) 343
CfoI GCGC 2 cut(s) 805, 883
Cfr10I RCCGGY 3 cut(s) 409, 743, 1022
Cfr13I GGNCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
CpoI CGGWCCG 1 cut(s) 652
CseI GACGC 3 cut(s) 478, 887, 1478
Csp6I GTAC 3 cut(s) 747, 1366, 1450
CspAI ACCGGT 1 cut(s) 743
CspI CGGWCCG 1 cut(s) 652
CviAII CATG 8 cut(s) 305, 344, 406, 1181, 1279, 1459, 1469, 1996
CviQI GTAC 3 cut(s) 747, 1366, 1450
DdeI CTNAG 7 cut(s) 680, 714, 762, 815, 965, 1565, 1589
DrdI GACNNNNNNGTC 3 cut(s) 191, 475, 748
DseDI GACNNNNNNGTC 3 cut(s) 191, 475, 748
EaeI YGGCCR 2 cut(s) 1066, 1258
Eam1104I CTCTTC 4 cut(s) 216, 261, 428, 1814
EarI CTCTTC 4 cut(s) 216, 261, 428, 1814
EciI GGCGGA 1 cut(s) 287
Eco130I CCWWGG 2 cut(s) 135, 1458
Eco24I GRGCYC 2 cut(s) 1239, 1721
Eco31I GGTCTC 1 cut(s) 1597
Eco47I GGWCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
Eco57I CTGAAG 3 cut(s) 485, 533, 1272
Eco72I CACGTG 1 cut(s) 235
Eco81I CCTNAGG 1 cut(s) 762
Eco88I CYCGRG 3 cut(s) 20, 323, 914
EcoO109I RGGNCCY 2 cut(s) 1042, 1958
EcoRI GAATTC 2 cut(s) 808, 1355
EcoRII CCWGG 3 cut(s) 171, 334, 623
EcoT14I CCWWGG 2 cut(s) 135, 1458
EcoT38I GRGCYC 2 cut(s) 1239, 1721
ErhI CCWWGG 2 cut(s) 135, 1458
Esp3I CGTCTC 1 cut(s) 569
FaeI CATG 8 cut(s) 308, 347, 409, 1184, 1282, 1462, 1472, 1999
FalI AAGNNNNNCTT 2 cut(s) 1001, 1033
FaqI GGGAC 2 cut(s) 653, 1720
FatI CATG 8 cut(s) 304, 343, 405, 1180, 1278, 1458, 1468, 1995
FauI CCCGC 1 cut(s) 892
FblI GTMKAC 1 cut(s) 702
Fnu4HI GCNGC 8 cut(s) 68, 159, 584, 826, 1027, 1248, 1648, 1773
FokI GGATG 2 cut(s) 413, 1571
FriOI GRGCYC 2 cut(s) 1239, 1721
Fsp4HI GCNGC 8 cut(s) 68, 159, 584, 826, 1027, 1248, 1648, 1773
FspBI CTAG 3 cut(s) 1430, 1619, 1920
GlaI GCGC 2 cut(s) 804, 882
GluI GCNGC 8 cut(s) 68, 159, 584, 826, 1027, 1248, 1648, 1773
GsuI CTGGAG 3 cut(s) 194, 607, 1659
HaeII RGCGCY 1 cut(s) 806
HaeIII GGCC 4 cut(s) 339, 546, 1068, 1260
HgaI GACGC 3 cut(s) 478, 887, 1478
HhaI GCGC 2 cut(s) 805, 883
Hin1I GRCGYC 2 cut(s) 192, 1489
Hin1II CATG 8 cut(s) 308, 347, 409, 1184, 1282, 1462, 1472, 1999
Hin6I GCGC 2 cut(s) 803, 881
HinP1I GCGC 2 cut(s) 803, 881
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HinfI GANTC 9 cut(s) 62, 224, 595, 678, 684, 976, 1170, 1295, 1675
HphI GGTGA 9 cut(s) 28, 571, 604, 1261, 1382, 1731, 1819, 1828, 1961
Hpy166II GTNNAC 6 cut(s) 403, 703, 898, 1073, 1399, 1810
Hpy8I GTNNAC 6 cut(s) 403, 703, 898, 1073, 1399, 1810
HpyAV CCTTC 8 cut(s) 108, 350, 366, 625, 841, 1086, 1356, 1444
HpyCH4III ACNGT 8 cut(s) 559, 986, 1064, 1232, 1349, 1698, 1726, 1828
HpyCH4IV ACGT 7 cut(s) 192, 234, 372, 699, 705, 749, 1125
HpyCH4V TGCA 6 cut(s) 308, 645, 1247, 1472, 1701, 1772
HpyF10VI GCNNNNNNNGC 9 cut(s) 164, 319, 478, 589, 642, 811, 889, 970, 1023
HpyF3I CTNAG 7 cut(s) 680, 714, 762, 815, 965, 1565, 1589
HpySE526I ACGT 7 cut(s) 192, 234, 372, 699, 705, 749, 1125
Hsp92I GRCGYC 2 cut(s) 192, 1489
Hsp92II CATG 8 cut(s) 308, 347, 409, 1184, 1282, 1462, 1472, 1999
HspAI GCGC 2 cut(s) 803, 881
Kpn2I TCCGGA 2 cut(s) 429, 654
KroI GCCGGC 2 cut(s) 409, 1022
KroNI GCCGGC 2 cut(s) 411, 1024
LmnI GCTCC 6 cut(s) 155, 217, 229, 318, 580, 657
Lsp1109I GCAGC 4 cut(s) 170, 595, 1259, 1784
LweI GCATC 1 cut(s) 1593
MaeI CTAG 3 cut(s) 1430, 1619, 1920
MaeII ACGT 7 cut(s) 192, 234, 372, 699, 705, 749, 1125
MaeIII GTNAC 5 cut(s) 28, 247, 523, 553, 1568
MfeI CAATTG 1 cut(s) 631
MflI RGATCY 7 cut(s) 4, 291, 1217, 1514, 1766, 1896, 1912
MhlI GDGCHC 3 cut(s) 234, 1239, 1721
MlsI TGGCCA 1 cut(s) 1260
MluNI TGGCCA 1 cut(s) 1260
MlyI GAGTC 5 cut(s) 71, 233, 604, 672, 1304
MmeI TCCRAC 6 cut(s) 207, 322, 587, 1038, 1525, 1940
Mox20I TGGCCA 1 cut(s) 1260
MreI CGCCGGCG 1 cut(s) 1022
MroI TCCGGA 2 cut(s) 429, 654
MroNI GCCGGC 2 cut(s) 409, 1022
MroXI GAANNNNTTC 2 cut(s) 785, 1016
MscI TGGCCA 1 cut(s) 1260
MseI TTAA 5 cut(s) 15, 141, 260, 1763, 1788
Msp20I TGGCCA 1 cut(s) 1260
MspA1I CMGCKG 3 cut(s) 825, 841, 1250
MspR9I CCNGG 5 cut(s) 173, 218, 336, 625, 638
MunI CAATTG 1 cut(s) 631
MvaI CCWGG 3 cut(s) 173, 336, 625
MvnI CGCG 1 cut(s) 881
MwoI GCNNNNNNNGC 9 cut(s) 164, 319, 478, 589, 642, 811, 889, 970, 1023
NaeI GCCGGC 2 cut(s) 411, 1024
NciI CCSGG 2 cut(s) 218, 638
NcoI CCATGG 1 cut(s) 1458
NgoMIV GCCGGC 2 cut(s) 409, 1022
NheI GCTAGC 1 cut(s) 1429
NlaIII CATG 8 cut(s) 308, 347, 409, 1184, 1282, 1462, 1472, 1999
NmeAIII GCCGAG 1 cut(s) 434
NmuCI GTSAC 1 cut(s) 553
NspI RCATGY 2 cut(s) 409, 1472
PaeR7I CTCGAG 1 cut(s) 914
PagI TCATGA 1 cut(s) 343
PcsI WCGNNNNNNNCGW 3 cut(s) 186, 696, 1026
PdiI GCCGGC 2 cut(s) 411, 1024
PdmI GAANNNNTTC 2 cut(s) 785, 1016
PfeI GAWTC 4 cut(s) 684, 976, 1170, 1675
PflFI GACNNNGTC 2 cut(s) 191, 1711
PinAI ACCGGT 1 cut(s) 743
PkrI GCNGC 8 cut(s) 69, 160, 585, 827, 1028, 1249, 1649, 1774
PleI GAGTC 5 cut(s) 70, 232, 603, 672, 1303
PmaCI CACGTG 1 cut(s) 235
PmlI CACGTG 1 cut(s) 235
PpsI GAGTC 5 cut(s) 70, 232, 603, 672, 1303
Ppu21I YACGTR 1 cut(s) 235
PpuMI RGGWCCY 2 cut(s) 1042, 1958
PshBI ATTAAT 1 cut(s) 15
Psp5II RGGWCCY 2 cut(s) 1042, 1958
Psp6I CCWGG 3 cut(s) 171, 334, 623
PspCI CACGTG 1 cut(s) 235
PspGI CCWGG 3 cut(s) 171, 334, 623
PspPI GGNCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
PspPPI RGGWCCY 2 cut(s) 1042, 1958
PstI CTGCAG 2 cut(s) 1249, 1774
PsuI RGATCY 7 cut(s) 4, 291, 1217, 1514, 1766, 1896, 1912
PsyI GACNNNGTC 2 cut(s) 191, 1711
PvuII CAGCTG 1 cut(s) 1250
RsaI GTAC 3 cut(s) 748, 1367, 1451
RsaNI GTAC 3 cut(s) 747, 1366, 1450
Rsr2I CGGWCCG 1 cut(s) 652
RsrII CGGWCCG 1 cut(s) 652
SalI GTCGAC 1 cut(s) 701
SaqAI TTAA 5 cut(s) 15, 141, 260, 1763, 1788
SatI GCNGC 8 cut(s) 68, 159, 584, 826, 1027, 1248, 1648, 1773
Sau96I GGNCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
SchI GAGTC 5 cut(s) 71, 233, 604, 672, 1304
ScrFI CCNGG 5 cut(s) 173, 218, 336, 625, 638
SduI GDGCHC 3 cut(s) 234, 1239, 1721
SfaNI GCATC 1 cut(s) 1593
SfcI CTRYAG 2 cut(s) 1245, 1770
Sfr274I CTCGAG 1 cut(s) 914
SgrAI CRCCGGYG 1 cut(s) 1022
SgrDI CGTCGACG 1 cut(s) 701
SinI GGWCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
SlaI CTCGAG 1 cut(s) 914
SmlI CTYRAG 4 cut(s) 482, 914, 1175, 1292
SmoI CTYRAG 4 cut(s) 482, 914, 1175, 1292
SspMI CTAG 3 cut(s) 1430, 1619, 1920
StyD4I CCNGG 5 cut(s) 171, 216, 334, 623, 636
StyI CCWWGG 2 cut(s) 135, 1458
TaaI ACNGT 8 cut(s) 559, 986, 1064, 1232, 1349, 1698, 1726, 1828
TaiI ACGT 7 cut(s) 195, 237, 375, 702, 708, 752, 1128
TaqI TCGA 8 cut(s) 690, 702, 735, 863, 915, 1575, 1715, 1752
TatI WGTACW 1 cut(s) 1449
TauI GCSGC 4 cut(s) 70, 828, 1029, 1650
TfiI GAWTC 4 cut(s) 684, 976, 1170, 1675
Tru1I TTAA 5 cut(s) 15, 141, 260, 1763, 1788
Tru9I TTAA 5 cut(s) 15, 141, 260, 1763, 1788
TscAI CASTG 2 cut(s) 1354, 1642
TseFI GTSAC 1 cut(s) 553
TseI GCWGC 4 cut(s) 158, 583, 1247, 1772
Tsp45I GTSAC 1 cut(s) 553
TspDTI ATGAA 6 cut(s) 332, 1007, 1013, 1105, 1109, 1197
TspGWI ACGGA 2 cut(s) 593, 944
TspRI CASTG 2 cut(s) 1354, 1642
Tth111I GACNNNGTC 2 cut(s) 191, 1711
VpaK11BI GGWCC 8 cut(s) 627, 652, 741, 931, 982, 1042, 1958, 1992
VspI ATTAAT 1 cut(s) 15
XapI RAATTY 4 cut(s) 392, 808, 1355, 1372
XceI RCATGY 2 cut(s) 409, 1472
XcmI CCANNNNNNNNNTGG 1 cut(s) 1541
XhoI CTCGAG 1 cut(s) 914
XmiI GTMKAC 1 cut(s) 702
XmnI GAANNNNTTC 2 cut(s) 785, 1016
XspI CTAG 3 cut(s) 1430, 1619, 1920
ZraI GACGTC 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.