Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0010367

Physical Location & Seq

Genomic Coordinates Reverse (-)

4695331 .. 4700938

Gene Structure 5608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g08050.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGGCGGATCCGATTCCTTCAGCAGCACCGCACAGATCCAACACCGACTTCTTCTCCGACCCCCTGGACTCCCACCCCCTCTGGTTCAAGCCCTCTCTCTTCCTCTCCCCTGACTTCGACTCCGAGGCCTACATCTCCGACCTCCGCACCTTCGTCCCCTTCGACACTCTCCGATCCGAGCTCCAGTCCTACCTCGCCTCCCTCAACCACGACCTCATCGACCTCATCAACCGCGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTCGTCGATGTCGACTCCGCCGTGGTGCGGATGCGGGCCCCGCTTGTGGAGCTGAGGGAGAAGATCGAGCAGTTCCGCGGCTCCGTGCAGGGATCGCTTGTGGCGCTCACGAATGGTTTGAAGCAGAGATCCGAGGCTGCGGAGGCTAGAGAGATCTTGGAGCTTCTCCTTGATACCTTTCACGTCGTCTCTAAGGTTGAAAAACTGATAAAGGAGTTACCGAGTGTGCCTGCCGACTGGTCAAACGGAGATGTGAATTTGGCAGAGAAGAATTTCATCAGCAACGGGACTGCCGAGAATGGGACTAGTCAAACGAAGAATGTCATCAGCAACGGGACTACCGAGAATGGGACTAGTGTTAGAGATACTCAAAGCATGCTTTTGGAGAGAATTGCCAGTGAGATGAATCGCCTCAAGTTCTATATTGCTCACGCACAGAACCTGCCTTTCATTGAAAACATGGAAAAGAGAATTCAGGGTGCTAGCCTATTGTTAGATGCCAGCCTGGGACATTGTTTTGTAGATGGACTGGAACATCGAGATGCAAATGCAATTTACAATTGCCTAAGGGCATATGCTGCCATTGATAATACAAGGAGTGCAGAAGAACTTTTCCGAACAACCATTGTCGCCCCACTAATACAAAAAGTTATTCCACATGGAGCATCATGGGCAGCTGGAAAGCCATCTGGAGATGAACTTGAGAATGATTATGAGCAAATAAAGGAATGCATTCAGAAAGACTGCAAATATTTGGTGGAAATTTCGTTTGAAGAAAATTCTGGTTTGCATGTGTTCGACTTCTTGGCGAATTCAATTCTCAAAGAGGTTCTCTCAGCAATCCAAAAGGGAAAACCTGGTGCTTTTTCTCCTGGACGACCAACAGAATTTCTGAAAAATTATAAATCGAGCCTAGATTTCCTGGCTCATCTGGAAGGTTACTTTCCGTCCAGAGCAGCTGTTTCCAAATTTCGAGCAGAAGCTGTATATAATGAGTTCATGAAGCAATGGAACCTTGGGGTTTATTTCTCTTTGAGGTTTCAGGAGATCGCGGGTGCTCTAGAATCTGTACTTGCGGCGACTAGTCTCGTCCCACTACAAAATCTTCTTTCAAGATACTCAAGTTGGTTGTCATCTGGACTAGCTGCTCGGAAGAAGGGTAATGCTGGCTCCAATCCTGGCTGTGAATGGGCTATTTCAACTGTACCAGATGAATTTCTTTATATTATTCATGACATAAATTGCCTTCACACAAGGGTTTGTGGGGACTTTCTTGAACATGTACTTGAGCTCCTTTCATCATGCTCTGGTGATACACTTGATCATGTAAAACGGAGTATTCTACACGGAGGAAAAGCATTGGATGCTTTAGCACCTGCCATCATCAACACCATTGTGGAGACTCTGGTTGAGAAGTCTGGTGAGGACTTGAGACAGCTAAAGGGAATAACAGCAACATACAGGATGACTAATAAACCTCTTCCTGTTAGACACTCACCCTATGTGTCAGGAGTATTACGGCCTTTGAAGGTGTTTTTGGATGGGGAGCGAGCTTCAAGGTATCTGAAAGAAGATGCTAAGAATGAACTAGTGCTTAGTGCTGCTACTGAGATTACTGGTCGATATTATGAGTCAGCTGCTGAACTCGTCAGTGTGGCTAGGAGAACAGAGTCTTCACTCCAGAAAATTAGGCTAGGTGCACAGAGACGAGGTGGAGCAGTAGATGTCTCGGATTCCAATGTGTCCGACACTGACAAGATTTGCATGCAATTATTCCTAGACATTCAGGAGTACGGCCGTAACCTGAGAGCCCTTGGCGTCGACGCTGCCAATATCGAATCTTACCGCTCATTGTGGCAATGTGTTGCTCCTGCAGACAATCAAGGTGTGATTAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005829 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008565 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016192 GO:0017119 GO:0031984 GO:0032991 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0048193 GO:0051179 GO:0051234 GO:0071702 GO:0071705 GO:0071840 GO:0098791 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG2 DUF3510

Protein Analysis

723

Amino Acids

80.13

Weight (kDa)

5.48

Isoelectric Point (pI)

35.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG2_N	PF06148	27 - 101	7e-26	COG2 N-terminal
COG2_C	PF12022	424 - 730	1.9e-96	COG complex component, COG2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24840
fragaria_vesca	FvH4_5g08050 FvH4_5g08050 FvH4_5g08050
malus_domestica	MD06G1143400.v1.1 MD14G1158600.v1.1
prunus_persica	Prupe.5G152600_v2.0.a1
pyrus_communis	pycom06g13310 pycom14g13230
rosa_chinensis	RchiOBHm_Chr7g0190411
rosa_laevigata	RLG00000004535
rosa_multiflora	Rmu_sc0014718.1_g000002 Rmu_sc0017751.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264650
rosa_rugosa	Rorug06G0504500 Rorug06G0504600
rosa_samantha	Rh7AG110300 Rh7BG112800 Rh7CG115100 Rh7DG113400
rosa_wichuraiana	Rw7G009570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1170
AarI	CACCTGC	1 cut(s)	1651
Acc36I	ACCTGC	2 cut(s)	717, 1651
AccBSI	CCGCTC	1 cut(s)	2115
AccI	GTMKAC	2 cut(s)	279, 2088
AccII	CGCG	3 cut(s)	234, 345, 1319
AclWI	GGATC	6 cut(s)	2, 15, 30, 168, 367, 390
AcoI	YGGCCR	1 cut(s)	2062
AcsI	RAATTY	9 cut(s)	523, 538, 738, 1029, 1045, 1078, 1154, 1235, 1481
AcyI	GRCGYC	1 cut(s)	2085
AfaI	GTAC	4 cut(s)	1338, 1473, 1551, 2060
AfiI	CCNNNNNNNGG	4 cut(s)	294, 313, 567, 615
AflIII	ACRYGT	1 cut(s)	1546
AhlI	ACTAGT	4 cut(s)	572, 620, 1349, 1855
AjiI	CACGTC	1 cut(s)	451
AjnI	CCWGG	6 cut(s)	63, 771, 1123, 1138, 1188, 1444
AjuI	GAANNNNNNNTTGG	4 cut(s)	32, 64, 1787, 1819
AleI	CACNNNNGTG	1 cut(s)	1661
Alw21I	GWGCWC	4 cut(s)	183, 1327, 1560, 1969
Alw26I	GTCTC	6 cut(s)	460, 1358, 1661, 1693, 1966, 1999
Alw44I	GTGCAC	1 cut(s)	1965
AlwI	GGATC	6 cut(s)	2, 15, 30, 168, 367, 390
AlwNI	CAGNNNCTG	3 cut(s)	709, 1250, 1907
AoxI	GGCC	4 cut(s)	126, 303, 1787, 2062
ApaI	GGGCCC	1 cut(s)	307
ApaLI	GTGCAC	1 cut(s)	1965
ApeKI	GCWGC	9 cut(s)	23, 404, 845, 941, 1223, 1412, 1868, 1904, 2093
ApoI	RAATTY	9 cut(s)	523, 538, 738, 1029, 1045, 1078, 1154, 1235, 1481
AseI	ATTAAT	1 cut(s)	2160
Asp700I	GAANNNNTTC	2 cut(s)	539, 999
AspLEI	GCGC	1 cut(s)	373
AspS9I	GGNCC	2 cut(s)	303, 304
AsuHPI	GGTGA	3 cut(s)	1589, 1700, 1755
AsuNHI	GCTAGC	1 cut(s)	749
AxyI	CCTNAGG	1 cut(s)	833
BaeGI	GKGCMC	2 cut(s)	307, 1969
BaeI	ACNNNNGTAYC	2 cut(s)	1375, 1408
BamHI	GGATCC	1 cut(s)	7
BanII	GRGCYC	4 cut(s)	183, 307, 1560, 2080
BbsI	GAAGAC	1 cut(s)	1932
Bbv12I	GWGCWC	4 cut(s)	183, 1327, 1560, 1969
BbvCI	CCTCAGC	2 cut(s)	257, 320
BbvI	GCAGC	9 cut(s)	35, 391, 832, 953, 1235, 1399, 1855, 1891, 2080
BccI	CCATC	4 cut(s)	785, 961, 1655, 1802
BceAI	ACGGC	4 cut(s)	272, 1802, 2049, 2077
BcgI	CGANNNNNNTGC	2 cut(s)	250, 284
BciT130I	CCWGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
BclI	TGATCA	1 cut(s)	1588
BcoDI	GTCTC	6 cut(s)	460, 1358, 1661, 1693, 1966, 1999
BcuI	ACTAGT	4 cut(s)	572, 620, 1349, 1855
BfmI	CTRYAG	1 cut(s)	2139
BfoI	RGCGCY	1 cut(s)	374
BfuAI	ACCTGC	2 cut(s)	717, 1651
BglII	AGATCT	1 cut(s)	420
Bme1390I	CCNGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
BmgBI	CACGTC	1 cut(s)	451
BmgT120I	GGNCC	2 cut(s)	303, 304
BmiI	GGNNCC	6 cut(s)	9, 305, 306, 349, 1280, 1438
BmrFI	CCNGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
BmsI	GCATC	6 cut(s)	288, 754, 799, 941, 1621, 1831
BmtI	GCTAGC	1 cut(s)	753
BpiI	GAAGAC	1 cut(s)	1932
BplI	GAGNNNNNCTC	2 cut(s)	1085, 1117
BpmI	CTGGAG	3 cut(s)	167, 978, 1931
Bpu10I	CCTNAGC	2 cut(s)	257, 320
BpuEI	CTTGAG	5 cut(s)	665, 989, 1372, 1574, 1717
BsaHI	GRCGYC	1 cut(s)	2085
BsaJI	CCNNGG	8 cut(s)	63, 123, 288, 343, 399, 772, 1282, 2080
BsaXI	ACNNNNNCTCC	8 cut(s)	38, 68, 104, 134, 182, 212, 1542, 1572
Bsc4I	CCNNNNNNNGG	4 cut(s)	294, 313, 567, 615
Bse1I	ACTGG	5 cut(s)	184, 509, 663, 801, 1888
Bse21I	CCTNAGG	1 cut(s)	833
Bse3DI	GCAATG	2 cut(s)	1280, 2132
BseBI	CCWGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
BseDI	CCNNGG	8 cut(s)	63, 123, 288, 343, 399, 772, 1282, 2080
BseGI	GGATG	4 cut(s)	303, 1636, 1737, 1813
BseLI	CCNNNNNNNGG	4 cut(s)	294, 313, 567, 615
BseMI	GCAATG	2 cut(s)	1280, 2132
BseMII	CTCAG	5 cut(s)	271, 311, 1116, 1866, 2063
BseNI	ACTGG	5 cut(s)	184, 509, 663, 801, 1888
BseSI	GKGCMC	2 cut(s)	307, 1969
BseX3I	CGGCCG	1 cut(s)	2062
BseXI	GCAGC	9 cut(s)	35, 391, 832, 953, 1235, 1399, 1855, 1891, 2080
BsgI	GTGCAG	2 cut(s)	374, 888
Bsh1236I	CGCG	3 cut(s)	234, 345, 1319
Bsh1285I	CGRYCG	1 cut(s)	2065
BshFI	GGCC	4 cut(s)	128, 305, 1789, 2064
BsiEI	CGRYCG	1 cut(s)	2065
BsiHKAI	GWGCWC	4 cut(s)	183, 1327, 1560, 1969
BslFI	GGGAC	8 cut(s)	140, 568, 583, 616, 631, 789, 1343, 1547
BslI	CCNNNNNNNGG	4 cut(s)	294, 313, 567, 615
BsmAI	GTCTC	6 cut(s)	460, 1358, 1661, 1693, 1966, 1999
BsmBI	CGTCTC	2 cut(s)	460, 1966
BsmFI	GGGAC	8 cut(s)	140, 568, 583, 616, 631, 789, 1343, 1547
BsmI	GAATGC	2 cut(s)	999, 1001
BsnI	GGCC	4 cut(s)	128, 305, 1789, 2064
Bsp120I	GGGCCC	1 cut(s)	303
Bsp1286I	GDGCHC	6 cut(s)	183, 307, 1327, 1560, 1969, 2080
Bsp143I	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
BspANI	GGCC	4 cut(s)	128, 305, 1789, 2064
BspCNI	CTCAG	5 cut(s)	270, 312, 1115, 1867, 2064
BspFNI	CGCG	3 cut(s)	234, 345, 1319
BspHI	TCATGA	2 cut(s)	1266, 1498
BspLI	GGNNCC	6 cut(s)	9, 305, 306, 349, 1280, 1438
BspMAI	CTGCAG	1 cut(s)	2143
BspMI	ACCTGC	2 cut(s)	717, 1651
BspOI	GCTAGC	1 cut(s)	753
BspPI	GGATC	6 cut(s)	2, 15, 30, 168, 367, 390
BsrBI	CCGCTC	1 cut(s)	2115
BsrDI	GCAATG	2 cut(s)	1280, 2132
BsrI	ACTGG	5 cut(s)	184, 509, 663, 801, 1888
BssECI	CCNNGG	8 cut(s)	63, 123, 288, 343, 399, 772, 1282, 2080
BssMI	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
BssNI	GRCGYC	1 cut(s)	2085
BssT1I	CCWWGG	2 cut(s)	1282, 2080
Bst2UI	CCWGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
Bst4CI	ACNGT	1 cut(s)	1471
Bst6I	CTCTTC	2 cut(s)	104, 1752
BstACI	GRCGYC	1 cut(s)	2085
BstAPI	GCANNNNNTGC	2 cut(s)	845, 1631
BstC8I	GCNNGC	8 cut(s)	303, 498, 644, 751, 769, 1435, 1818, 2033
BstDEI	CTNAG	9 cut(s)	257, 320, 459, 833, 1102, 1845, 1862, 1875, 2072
BstDSI	CCRYGG	2 cut(s)	288, 343
BstF5I	GGATG	4 cut(s)	303, 1636, 1737, 1813
BstFNI	CGCG	3 cut(s)	234, 345, 1319
BstH2I	RGCGCY	1 cut(s)	374
BstHHI	GCGC	1 cut(s)	373
BstKTI	GATC	9 cut(s)	10, 38, 176, 333, 362, 398, 423, 1317, 1591
BstMAI	GTCTC	6 cut(s)	460, 1358, 1661, 1693, 1966, 1999
BstMBI	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
BstMCI	CGRYCG	1 cut(s)	2065
BstMWI	GCNNNNNNNGC	8 cut(s)	307, 316, 361, 370, 410, 845, 938, 1631
BstNI	CCWGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
BstNSI	RCATGY	4 cut(s)	646, 1061, 1550, 2035
BstSCI	CCNGG	6 cut(s)	63, 771, 1123, 1138, 1188, 1444
BstSFI	CTRYAG	1 cut(s)	2139
BstSLI	GKGCMC	2 cut(s)	307, 1969
BstUI	CGCG	3 cut(s)	234, 345, 1319
BstV1I	GCAGC	9 cut(s)	35, 391, 832, 953, 1235, 1399, 1855, 1891, 2080
BstV2I	GAAGAC	1 cut(s)	1932
BstX2I	RGATCY	4 cut(s)	7, 35, 395, 420
BstYI	RGATCY	4 cut(s)	7, 35, 395, 420
BstZI	CGGCCG	1 cut(s)	2062
Bsu36I	CCTNAGG	1 cut(s)	833
BsuRI	GGCC	4 cut(s)	128, 305, 1789, 2064
BtgI	CCRYGG	2 cut(s)	288, 343
BtrI	CACGTC	1 cut(s)	451
BtsCI	GGATG	4 cut(s)	303, 1636, 1737, 1813
BtsIMutI	CAGTG	3 cut(s)	670, 1924, 2016
BveI	ACCTGC	2 cut(s)	717, 1651
Cac8I	GCNNGC	8 cut(s)	303, 498, 644, 751, 769, 1435, 1818, 2033
CaiI	CAGNNNCTG	3 cut(s)	709, 1250, 1907
CciI	TCATGA	2 cut(s)	1266, 1498
CfoI	GCGC	1 cut(s)	373
Cfr13I	GGNCC	2 cut(s)	303, 304
Cfr42I	CCGCGG	1 cut(s)	346
CseI	GACGC	2 cut(s)	2074, 2099
CsiI	ACCWGGT	1 cut(s)	1123
Csp6I	GTAC	4 cut(s)	1337, 1472, 1550, 2059
CviQI	GTAC	4 cut(s)	1337, 1472, 1550, 2059
DdeI	CTNAG	9 cut(s)	257, 320, 459, 833, 1102, 1845, 1862, 1875, 2072
DpnI	GATC	9 cut(s)	9, 37, 175, 332, 361, 397, 422, 1316, 1590
DpnII	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
EaeI	YGGCCR	1 cut(s)	2062
EagI	CGGCCG	1 cut(s)	2062
Eam1104I	CTCTTC	2 cut(s)	104, 1752
EarI	CTCTTC	2 cut(s)	104, 1752
EciI	GGCGGA	2 cut(s)	20, 274
Ecl136II	GAGCTC	2 cut(s)	181, 1558
EclXI	CGGCCG	1 cut(s)	2062
Eco130I	CCWWGG	2 cut(s)	1282, 2080
Eco147I	AGGCCT	1 cut(s)	128
Eco24I	GRGCYC	4 cut(s)	183, 307, 1560, 2080
Eco52I	CGGCCG	1 cut(s)	2062
Eco53kI	GAGCTC	2 cut(s)	181, 1558
Eco81I	CCTNAGG	1 cut(s)	833
EcoICRI	GAGCTC	2 cut(s)	181, 1558
EcoO109I	RGGNCCY	1 cut(s)	304
EcoRI	GAATTC	2 cut(s)	738, 1078
EcoRII	CCWGG	6 cut(s)	63, 771, 1123, 1138, 1188, 1444
EcoT14I	CCWWGG	2 cut(s)	1282, 2080
EcoT22I	ATGCAT	1 cut(s)	1001
EcoT38I	GRGCYC	4 cut(s)	183, 307, 1560, 2080
ErhI	CCWWGG	2 cut(s)	1282, 2080
Esp3I	CGTCTC	2 cut(s)	460, 1966
FaqI	GGGAC	8 cut(s)	140, 568, 583, 616, 631, 789, 1343, 1547
FauI	CCCGC	3 cut(s)	294, 315, 1312
FauNDI	CATATG	1 cut(s)	841
FbaI	TGATCA	1 cut(s)	1588
FblI	GTMKAC	2 cut(s)	279, 2088
FokI	GGATG	4 cut(s)	310, 1643, 1744, 1820
FriOI	GRGCYC	4 cut(s)	183, 307, 1560, 2080
GlaI	GCGC	1 cut(s)	372
GsuI	CTGGAG	3 cut(s)	167, 978, 1931
HaeII	RGCGCY	1 cut(s)	374
HaeIII	GGCC	4 cut(s)	128, 305, 1789, 2064
HgaI	GACGC	2 cut(s)	2074, 2099
HhaI	GCGC	1 cut(s)	373
Hin1I	GRCGYC	1 cut(s)	2085
Hin6I	GCGC	1 cut(s)	371
HinP1I	GCGC	1 cut(s)	371
HincII	GTYRAC	3 cut(s)	253, 280, 2089
HindII	GTYRAC	3 cut(s)	253, 280, 2089
HphI	GGTGA	3 cut(s)	1589, 1700, 1755
Hpy166II	GTNNAC	4 cut(s)	253, 280, 1967, 2089
Hpy8I	GTNNAC	4 cut(s)	253, 280, 1967, 2089
Hpy99I	CGWCG	4 cut(s)	275, 455, 2090, 2093
HpyAV	CCTTC	7 cut(s)	27, 160, 169, 1196, 1417, 1523, 1789
HpyCH4III	ACNGT	1 cut(s)	1471
HpyCH4IV	ACGT	1 cut(s)	450
HpyF10VI	GCNNNNNNNGC	8 cut(s)	307, 316, 361, 370, 410, 845, 938, 1631
HpyF3I	CTNAG	9 cut(s)	257, 320, 459, 833, 1102, 1845, 1862, 1875, 2072
HpySE526I	ACGT	1 cut(s)	450
Hsp92I	GRCGYC	1 cut(s)	2085
HspAI	GCGC	1 cut(s)	371
Ksp22I	TGATCA	1 cut(s)	1588
KspI	CCGCGG	1 cut(s)	346
Kzo9I	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
Lsp1109I	GCAGC	9 cut(s)	35, 391, 832, 953, 1235, 1399, 1855, 1891, 2080
LweI	GCATC	6 cut(s)	288, 754, 799, 941, 1621, 1831
MabI	ACCWGGT	1 cut(s)	1123
MaeII	ACGT	1 cut(s)	450
MaeIII	GTNAC	3 cut(s)	483, 1205, 2066
MalI	GATC	9 cut(s)	9, 37, 175, 332, 361, 397, 422, 1316, 1590
MbiI	CCGCTC	1 cut(s)	2115
MboI	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
MfeI	CAATTG	1 cut(s)	826
MflI	RGATCY	4 cut(s)	7, 35, 395, 420
MhlI	GDGCHC	6 cut(s)	183, 307, 1327, 1560, 1969, 2080
MlyI	GAGTC	6 cut(s)	62, 113, 275, 1663, 1907, 1946
MmeI	TCCRAC	4 cut(s)	63, 81, 162, 2037
Mph1103I	ATGCAT	1 cut(s)	1001
MroXI	GAANNNNTTC	2 cut(s)	539, 999
MseI	TTAA	1 cut(s)	2160
MslI	CAYNNNNRTG	2 cut(s)	807, 1661
MspA1I	CMGCKG	4 cut(s)	345, 944, 1226, 1904
MspR9I	CCNGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
MunI	CAATTG	1 cut(s)	826
Mva1269I	GAATGC	2 cut(s)	999, 1001
MvaI	CCWGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
MvnI	CGCG	3 cut(s)	234, 345, 1319
MwoI	GCNNNNNNNGC	8 cut(s)	307, 316, 361, 370, 410, 845, 938, 1631
NdeI	CATATG	1 cut(s)	841
NdeII	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
NheI	GCTAGC	1 cut(s)	749
NlaIV	GGNNCC	6 cut(s)	9, 305, 306, 349, 1280, 1438
NmeAIII	GCCGAG	1 cut(s)	586
NsiI	ATGCAT	1 cut(s)	1001
NspI	RCATGY	4 cut(s)	646, 1061, 1550, 2035
OliI	CACNNNNGTG	1 cut(s)	1661
PaeI	GCATGC	2 cut(s)	646, 2035
PagI	TCATGA	2 cut(s)	1266, 1498
PaqCI	CACCTGC	1 cut(s)	1651
PceI	AGGCCT	1 cut(s)	128
PciI	ACATGT	1 cut(s)	1546
PcsI	WCGNNNNNNNCGW	7 cut(s)	159, 216, 246, 276, 285, 558, 606
PctI	GAATGC	2 cut(s)	999, 1001
PdmI	GAANNNNTTC	2 cut(s)	539, 999
PfeI	GAWTC	5 cut(s)	13, 673, 1331, 2000, 2105
PflFI	GACNNNGTC	1 cut(s)	248
PfoI	TCCNGGA	1 cut(s)	1138
PleI	GAGTC	6 cut(s)	62, 113, 275, 1663, 1906, 1945
PpsI	GAGTC	6 cut(s)	62, 113, 275, 1663, 1906, 1945
PscI	ACATGT	1 cut(s)	1546
PshBI	ATTAAT	1 cut(s)	2160
PsiI	TTATAA	1 cut(s)	1170
Psp124BI	GAGCTC	2 cut(s)	183, 1560
Psp6I	CCWGG	6 cut(s)	63, 771, 1123, 1138, 1188, 1444
PspGI	CCWGG	6 cut(s)	63, 771, 1123, 1138, 1188, 1444
PspN4I	GGNNCC	6 cut(s)	9, 305, 306, 349, 1280, 1438
PspOMI	GGGCCC	1 cut(s)	303
PspPI	GGNCC	2 cut(s)	303, 304
PstI	CTGCAG	1 cut(s)	2143
PstNI	CAGNNNCTG	3 cut(s)	709, 1250, 1907
PsuI	RGATCY	4 cut(s)	7, 35, 395, 420
PsyI	GACNNNGTC	1 cut(s)	248
PvuII	CAGCTG	3 cut(s)	944, 1226, 1904
RsaI	GTAC	4 cut(s)	1338, 1473, 1551, 2060
RsaNI	GTAC	4 cut(s)	1337, 1472, 1550, 2059
RseI	CAYNNNNRTG	2 cut(s)	807, 1661
SacI	GAGCTC	2 cut(s)	183, 1560
SacII	CCGCGG	1 cut(s)	346
SalI	GTCGAC	2 cut(s)	278, 2087
SaqAI	TTAA	1 cut(s)	2160
Sau3AI	GATC	9 cut(s)	7, 35, 173, 330, 359, 395, 420, 1314, 1588
Sau96I	GGNCC	2 cut(s)	303, 304
SchI	GAGTC	6 cut(s)	62, 113, 275, 1663, 1907, 1946
ScrFI	CCNGG	6 cut(s)	65, 773, 1125, 1140, 1190, 1446
SduI	GDGCHC	6 cut(s)	183, 307, 1327, 1560, 1969, 2080
SexAI	ACCWGGT	1 cut(s)	1123
SfaNI	GCATC	6 cut(s)	288, 754, 799, 941, 1621, 1831
SfcI	CTRYAG	1 cut(s)	2139
Sfr303I	CCGCGG	1 cut(s)	346
SgrBI	CCGCGG	1 cut(s)	346
SgrDI	CGTCGACG	1 cut(s)	2087
SmiMI	CAYNNNNRTG	2 cut(s)	807, 1661
SmlI	CTYRAG	5 cut(s)	680, 968, 1387, 1553, 1696
SmoI	CTYRAG	5 cut(s)	680, 968, 1387, 1553, 1696
SpeI	ACTAGT	4 cut(s)	572, 620, 1349, 1855
SphI	GCATGC	2 cut(s)	646, 2035
SseBI	AGGCCT	1 cut(s)	128
SspI	AATATT	1 cut(s)	1019
SstI	GAGCTC	2 cut(s)	183, 1560
StuI	AGGCCT	1 cut(s)	128
StyD4I	CCNGG	6 cut(s)	63, 771, 1123, 1138, 1188, 1444
StyI	CCWWGG	2 cut(s)	1282, 2080
TaaI	ACNGT	1 cut(s)	1471
TaiI	ACGT	1 cut(s)	453
TatI	WGTACW	2 cut(s)	1336, 1549
TauI	GCSGC	2 cut(s)	348, 1346
TfiI	GAWTC	5 cut(s)	13, 673, 1331, 2000, 2105
Tru1I	TTAA	1 cut(s)	2160
Tru9I	TTAA	1 cut(s)	2160
TscAI	CASTG	3 cut(s)	670, 1924, 2023
TseI	GCWGC	9 cut(s)	23, 404, 845, 941, 1223, 1412, 1868, 1904, 2093
TspGWI	ACGGA	5 cut(s)	340, 528, 1203, 1615, 1629
TspRI	CASTG	3 cut(s)	670, 1924, 2023
Tth111I	GACNNNGTC	1 cut(s)	248
VneI	GTGCAC	1 cut(s)	1965
VspI	ATTAAT	1 cut(s)	2160
XapI	RAATTY	9 cut(s)	523, 538, 738, 1029, 1045, 1078, 1154, 1235, 1481
XbaI	TCTAGA	1 cut(s)	1327
XceI	RCATGY	4 cut(s)	646, 1061, 1550, 2035
XmiI	GTMKAC	2 cut(s)	279, 2088
XmnI	GAANNNNTTC	2 cut(s)	539, 999
Zsp2I	ATGCAT	1 cut(s)	1001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.