Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0010367

Physical Location & Seq

Genomic Coordinates Forward (+)

8672346 .. 8677390

Gene Structure 5045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG110300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGGCGGATCCAATTCCATCAGCACCGCACAGATCCAACACCGACTTCTTCTCCGACCCCCTCGACTCCCACCCCCTCTGGTTCAAGCCCGCGCTCTTCCTCTCCCCGGACTTCGACTCCGAGGCCTACATCTCCGACCTCCGAACCTTCGTCCCCTTCGACACCCTCCGATCCGAGCTCCAGTCCTATCTCGCCTCCCTCAACCATGACCTCATCGACCTCATCAACCGCGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACTCCGCCGTCGTTCGCATGCGGGCCCCGCTCCTGGAGCTCAGGGAGAAGATCGACCAGTTCAGAGCCTCCGTGCAGGGCTCGCTTGTGGCGCTGACCAATGGATTGAAGCAGAGATCCGAGGCCGCCGAGGCTAGGGAGATCTTGGAGCTTCTGCTCGATACGTTTCACGTCGTCTCCAAGGTTGAAAAACTAATAAAGGAGTTGCCTAGTGTGCCTGCCGATTGGTCAAACGGAGATGTAAATTTAGCAGAGAAGAATTTTATCAGCAACGGGACTACCGAGAATGGGACAAATCTCAGAGATACTCAAAGCATGCTTTTGGAGAGAATTGCCAGTGAGATGAATCGCCTCAAGTTCTATATTGCTCATGCACAGAACCTGCCTTTCATTGAAAACATGGAGAAGAGGATCCAGGGTGCTAGCCTATTATTAGATGCCAGCCTGGGACATTGTTTTGTAGATGGACTGGAACATCGAGATGCAAATGCAATTTACAATTGCTTAAGGGCATATGCTGCCATTGATAATACTAGGAGTGCAGAAGAACTTTTCCGAACAACCATTGTGGCCCCATTAATACAAAAAGTTATTCCACATGCGGCATCATGGGCGGATGGAAAGCCATCTGGAGATGAACTTGAGAATGATTATCAGCAAATTAAGCAATGCATTCAGAAAGACTGCAAATTTTTGTTGGAAATTTCTTTTGAAGAAAATTCTGGTTTGCACGTGTTCGACTTCTTGGCAAACTCAATTCTCAAAGAGGTTCTTTCAGCAATCCAAAAGGGAAAACCTGGTGCTTTTTCTCCTGGACGACCAACAGAATTTTTGAAAAATTATAAATCAAGCCTAGAGTTCTTGGCTCATTTAGAAGGCTACTTTCTGTCCAGAGCAGCTGTTAGTAAATTTCGAGCAGAAGCCGTTTATAATGAGTTCATGAAGCAATGGAACCTTGGGGTTTATTTCTCTTTGAGGTTTCAGGAGATTGCGGGTGCTCTAGATTCTGTACTTGCGGCAACTAGTCTTGTCCCTGTTCATAATATACCTTCTGGTCAAGGAGATTCTCCAGACTTGACATTGAAACAAAGTGCTACTTTGTTAGAGTGCTTGGAATCCTGTTGGAGAGAAGACGTTGTTGTTCTTTCTTATTCTGACAAGTTTCTTCGCTTATCCTTGCAGCTTCTTTCAAGATACTCAAGTTGGTTGTCATCTGGACTAGCCGCTCGGAAGAGGGGTAATACCGGCTCCAATCCTGGCTGTGAATGGGCTATTTCAACTGTACCAGATGAATTTATTTATATTATTCATGACATCAATTGTCTTCACACAAGGGTTTGTGGTGACTTTCTCGAACATGTACTTGAGCTTCTTTCATCATGTTCTGGCGATATACTTGATCATGTAAAACAGAGCATTTTACACGGAGGAAAAGCTTTGGATGCATTAGTACCTGCCATTATCAACACTATTGTGGAGACTCTGGTTGAGAAGTCTGTTGAGGACTTGAGGCAGCTAAAGGGAATAACAGCAACGTATAGGATGACTAATAAACCTCTTCCTGTCAGACACTCACCGTATGTGTCGGGAGTATTACGTCCCCTGAAGGTATGCAGCCTGAAATGGCTATGGCTAAATTGTCATTGTGTACTCAAAACAGCAATTTCTTTTTCTTTTTTTTTCTCCTCTGCCATCTGCGACTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005829 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008565 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016192 GO:0017119 GO:0031984 GO:0032991 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0048193 GO:0051179 GO:0051234 GO:0071702 GO:0071705 GO:0071840 GO:0098791 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG2 DUF3510

Protein Analysis

660

Amino Acids

73.93

Weight (kDa)

5.57

Isoelectric Point (pI)

38.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG2_N	PF06148	26 - 100	1.1e-25	COG2 N-terminal
COG2_C	PF12022	407 - 629	1e-70	COG complex component, COG2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24840
fragaria_vesca	FvH4_5g08050 FvH4_5g08050 FvH4_5g08050
malus_domestica	MD06G1143400.v1.1 MD14G1158600.v1.1
prunus_persica	Prupe.5G152600_v2.0.a1
pyrus_communis	pycom06g13310 pycom14g13230
rosa_chinensis	RchiOBHm_Chr7g0190411
rosa_laevigata	RLG00000004535
rosa_multiflora	Rmu_sc0014718.1_g000002 Rmu_sc0017751.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264650
rosa_rugosa	Rorug06G0504500 Rorug06G0504600
rosa_samantha	Rh7AG110300 Rh7BG112800 Rh7CG115100 Rh7DG113400
rosa_wichuraiana	Rw7G009570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1119, 1206
AasI	GACNNNNNNGTC	1 cut(s)	284
AatII	GACGTC	1 cut(s)	276
Acc36I	ACCTGC	2 cut(s)	666, 1738
AccBSI	CCGCTC	2 cut(s)	307, 1502
AccI	GTMKAC	2 cut(s)	270, 276
AccII	CGCG	2 cut(s)	92, 231
AclWI	GGATC	7 cut(s)	2, 15, 27, 165, 387, 682, 695
AcsI	RAATTY	8 cut(s)	520, 535, 965, 978, 994, 1103, 1184, 1568
AcuI	CTGAAG	1 cut(s)	1901
AcvI	CACGTG	1 cut(s)	1009
AcyI	GRCGYC	1 cut(s)	273
AfaI	GTAC	5 cut(s)	1287, 1560, 1638, 1728, 1926
AfiI	CCNNNNNNNGG	4 cut(s)	106, 310, 411, 564
AflII	CTTAAG	1 cut(s)	781
AflIII	ACRYGT	2 cut(s)	1008, 1633
AgsI	TTSAA	9 cut(s)	85, 385, 464, 671, 989, 1111, 1360, 1467, 1554
AhlI	ACTAGT	1 cut(s)	1298
AjiI	CACGTC	1 cut(s)	448
AjnI	CCWGG	6 cut(s)	309, 690, 720, 1072, 1087, 1531
AjuI	GAANNNNNNNTTGG	2 cut(s)	29, 61
AleI	CACNNNNGTG	1 cut(s)	1748
AluBI	AGCT	9 cut(s)	178, 265, 316, 427, 1175, 1459, 1645, 1712, 1792
AluI	AGCT	9 cut(s)	178, 265, 316, 427, 1175, 1459, 1645, 1712, 1792
Alw21I	GWGCWC	3 cut(s)	180, 318, 1276
Alw26I	GTCTC	2 cut(s)	457, 1748
AlwI	GGATC	7 cut(s)	2, 15, 27, 165, 387, 682, 695
AlwNI	CAGNNNCTG	1 cut(s)	658
AoxI	GGCC	4 cut(s)	123, 300, 399, 846
ApaI	GGGCCC	1 cut(s)	304
ApeKI	GCWGC	5 cut(s)	794, 1172, 1456, 1789, 1890
ApoI	RAATTY	8 cut(s)	520, 535, 965, 978, 994, 1103, 1184, 1568
AseI	ATTAAT	1 cut(s)	854
AspLEI	GCGC	2 cut(s)	94, 370
AspS9I	GGNCC	3 cut(s)	300, 301, 847
AsuC2I	CCSGG	1 cut(s)	107
AsuHPI	GGTGA	2 cut(s)	1631, 1842
AsuNHI	GCTAGC	1 cut(s)	698
BaeGI	GKGCMC	1 cut(s)	304
BaeI	ACNNNNGTAYC	2 cut(s)	1462, 1495
BamHI	GGATCC	2 cut(s)	7, 687
BanII	GRGCYC	4 cut(s)	180, 304, 318, 359
BarI	GAAGNNNNNNTAC	2 cut(s)	1629, 1661
BbrPI	CACGTG	1 cut(s)	1009
BbsI	GAAGAC	2 cut(s)	1413, 1592
Bbv12I	GWGCWC	3 cut(s)	180, 318, 1276
BbvCI	CCTCAGC	1 cut(s)	254
BbvI	GCAGC	5 cut(s)	781, 1184, 1468, 1801, 1902
BccI	CCATC	5 cut(s)	25, 734, 887, 910, 1976
BceAI	ACGGC	2 cut(s)	269, 1184
BcgI	CGANNNNNNTGC	2 cut(s)	247, 281
BciT130I	CCWGG	6 cut(s)	311, 692, 722, 1074, 1089, 1533
BclI	TGATCA	1 cut(s)	1675
BcnI	CCSGG	1 cut(s)	107
BcoDI	GTCTC	2 cut(s)	457, 1748
BcuI	ACTAGT	1 cut(s)	1298
BfaI	CTAG	8 cut(s)	411, 486, 699, 810, 1130, 1277, 1299, 1496
BfoI	RGCGCY	1 cut(s)	371
BfrI	CTTAAG	1 cut(s)	781
BfuAI	ACCTGC	2 cut(s)	666, 1738
BglI	GCCNNNNNGGC	1 cut(s)	407
BglII	AGATCT	1 cut(s)	417
BisI	GCNGC	9 cut(s)	402, 795, 879, 1173, 1293, 1457, 1500, 1790, 1891
BlsI	GCNGC	9 cut(s)	403, 796, 880, 1174, 1294, 1458, 1501, 1791, 1892
Bme1390I	CCNGG	7 cut(s)	107, 311, 692, 722, 1074, 1089, 1533
BmgBI	CACGTC	1 cut(s)	448
BmgT120I	GGNCC	3 cut(s)	300, 301, 847
BmiI	GGNNCC	7 cut(s)	9, 302, 303, 689, 849, 1229, 1525
BmrFI	CCNGG	7 cut(s)	107, 311, 692, 722, 1074, 1089, 1533
BmsI	GCATC	4 cut(s)	703, 748, 890, 1708
BmtI	GCTAGC	1 cut(s)	702
BpiI	GAAGAC	2 cut(s)	1413, 1592
BpmI	CTGGAG	4 cut(s)	164, 332, 927, 1329
Bpu10I	CCTNAGC	2 cut(s)	254, 317
BpuEI	CTTGAG	5 cut(s)	614, 938, 1459, 1661, 1804
BpuMI	CCSGG	1 cut(s)	107
BsaAI	YACGTR	1 cut(s)	1009
BsaHI	GRCGYC	1 cut(s)	273
BsaJI	CCNNGG	8 cut(s)	105, 120, 396, 405, 456, 691, 721, 1231
BsaXI	ACNNNNNCTCC	8 cut(s)	35, 65, 101, 131, 263, 293, 437, 467
Bsc4I	CCNNNNNNNGG	4 cut(s)	106, 310, 411, 564
Bse118I	RCCGGY	1 cut(s)	1520
Bse1I	ACTGG	5 cut(s)	181, 334, 612, 750, 1982
Bse3DI	GCAATG	2 cut(s)	950, 1229
BseBI	CCWGG	6 cut(s)	311, 692, 722, 1074, 1089, 1533
BseDI	CCNNGG	8 cut(s)	105, 120, 396, 405, 456, 691, 721, 1231
BseGI	GGATG	3 cut(s)	898, 1723, 1824
BseLI	CCNNNNNNNGG	4 cut(s)	106, 310, 411, 564
BseMI	GCAATG	2 cut(s)	950, 1229
BseMII	CTCAG	3 cut(s)	268, 331, 589
BseNI	ACTGG	5 cut(s)	181, 334, 612, 750, 1982
BseRI	GAGGAG	1 cut(s)	1951
BseSI	GKGCMC	1 cut(s)	304
BseXI	GCAGC	5 cut(s)	781, 1184, 1468, 1801, 1902
BsgI	GTGCAG	2 cut(s)	371, 837
Bsh1236I	CGCG	2 cut(s)	92, 231
BshFI	GGCC	4 cut(s)	125, 302, 401, 848
BsiHKAI	GWGCWC	3 cut(s)	180, 318, 1276
BsiSI	CCGG	2 cut(s)	107, 1521
BslFI	GGGAC	6 cut(s)	137, 565, 580, 738, 1292, 1860
BslI	CCNNNNNNNGG	4 cut(s)	106, 310, 411, 564
BsmAI	GTCTC	2 cut(s)	457, 1748
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	6 cut(s)	137, 565, 580, 738, 1292, 1860
BsmI	GAATGC	1 cut(s)	948
BsnI	GGCC	4 cut(s)	125, 302, 401, 848
Bsp120I	GGGCCC	1 cut(s)	300
Bsp1286I	GDGCHC	5 cut(s)	180, 304, 318, 359, 1276
Bsp143I	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
BspANI	GGCC	4 cut(s)	125, 302, 401, 848
BspCNI	CTCAG	3 cut(s)	267, 330, 588
BspFNI	CGCG	2 cut(s)	92, 231
BspHI	TCATGA	2 cut(s)	1215, 1585
BspLI	GGNNCC	7 cut(s)	9, 302, 303, 689, 849, 1229, 1525
BspMI	ACCTGC	2 cut(s)	666, 1738
BspOI	GCTAGC	1 cut(s)	702
BspPI	GGATC	7 cut(s)	2, 15, 27, 165, 387, 682, 695
BspQI	GCTCTTC	1 cut(s)	101
BspTI	CTTAAG	1 cut(s)	781
BsrBI	CCGCTC	2 cut(s)	307, 1502
BsrDI	GCAATG	2 cut(s)	950, 1229
BsrFI	RCCGGY	1 cut(s)	1520
BsrI	ACTGG	5 cut(s)	181, 334, 612, 750, 1982
BssAI	RCCGGY	1 cut(s)	1520
BssECI	CCNNGG	8 cut(s)	105, 120, 396, 405, 456, 691, 721, 1231
BssMI	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
BssNI	GRCGYC	1 cut(s)	273
BssT1I	CCWWGG	2 cut(s)	456, 1231
Bst2UI	CCWGG	6 cut(s)	311, 692, 722, 1074, 1089, 1533
Bst4CI	ACNGT	2 cut(s)	1558, 1854
Bst6I	CTCTTC	4 cut(s)	101, 677, 1502, 1839
BstACI	GRCGYC	1 cut(s)	273
BstAFI	CTTAAG	1 cut(s)	781
BstAPI	GCANNNNNTGC	1 cut(s)	794
BstBAI	YACGTR	1 cut(s)	1009
BstC8I	GCNNGC	8 cut(s)	90, 296, 300, 359, 495, 593, 700, 718
BstDEI	CTNAG	3 cut(s)	254, 317, 575
BstF5I	GGATG	3 cut(s)	898, 1723, 1824
BstFNI	CGCG	2 cut(s)	92, 231
BstH2I	RGCGCY	1 cut(s)	371
BstHHI	GCGC	2 cut(s)	94, 370
BstKTI	GATC	8 cut(s)	10, 35, 173, 330, 395, 420, 690, 1678
BstMAI	GTCTC	2 cut(s)	457, 1748
BstMBI	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
BstNI	CCWGG	6 cut(s)	311, 692, 722, 1074, 1089, 1533
BstNSI	RCATGY	4 cut(s)	298, 595, 878, 1637
BstSCI	CCNGG	7 cut(s)	105, 309, 690, 720, 1072, 1087, 1531
BstSLI	GKGCMC	1 cut(s)	304
BstUI	CGCG	2 cut(s)	92, 231
BstV1I	GCAGC	5 cut(s)	781, 1184, 1468, 1801, 1902
BstV2I	GAAGAC	2 cut(s)	1413, 1592
BstX2I	RGATCY	5 cut(s)	7, 32, 392, 417, 687
BstYI	RGATCY	5 cut(s)	7, 32, 392, 417, 687
BsuRI	GGCC	4 cut(s)	125, 302, 401, 848
BtrI	CACGTC	1 cut(s)	448
BtsCI	GGATG	3 cut(s)	898, 1723, 1824
BtsIMutI	CAGTG	1 cut(s)	619
BveI	ACCTGC	2 cut(s)	666, 1738
Cac8I	GCNNGC	8 cut(s)	90, 296, 300, 359, 495, 593, 700, 718
CaiI	CAGNNNCTG	1 cut(s)	658
CciI	TCATGA	2 cut(s)	1215, 1585
CfoI	GCGC	2 cut(s)	94, 370
Cfr10I	RCCGGY	1 cut(s)	1520
Cfr13I	GGNCC	3 cut(s)	300, 301, 847
CsiI	ACCWGGT	1 cut(s)	1072
Csp6I	GTAC	5 cut(s)	1286, 1559, 1637, 1727, 1925
CspCI	CAANNNNNGTGG	2 cut(s)	825, 860
CviQI	GTAC	5 cut(s)	1286, 1559, 1637, 1727, 1925
DdeI	CTNAG	3 cut(s)	254, 317, 575
DpnI	GATC	8 cut(s)	9, 34, 172, 329, 394, 419, 689, 1677
DpnII	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
DrdI	GACNNNNNNGTC	1 cut(s)	284
DseDI	GACNNNNNNGTC	1 cut(s)	284
Eam1104I	CTCTTC	4 cut(s)	101, 677, 1502, 1839
EarI	CTCTTC	4 cut(s)	101, 677, 1502, 1839
EciI	GGCGGA	3 cut(s)	20, 271, 905
Ecl136II	GAGCTC	2 cut(s)	178, 316
Eco130I	CCWWGG	2 cut(s)	456, 1231
Eco147I	AGGCCT	1 cut(s)	125
Eco24I	GRGCYC	4 cut(s)	180, 304, 318, 359
Eco53kI	GAGCTC	2 cut(s)	178, 316
Eco57I	CTGAAG	1 cut(s)	1901
Eco72I	CACGTG	1 cut(s)	1009
EcoICRI	GAGCTC	2 cut(s)	178, 316
EcoO109I	RGGNCCY	1 cut(s)	301
EcoRII	CCWGG	6 cut(s)	309, 690, 720, 1072, 1087, 1531
EcoT14I	CCWWGG	2 cut(s)	456, 1231
EcoT22I	ATGCAT	2 cut(s)	950, 1723
EcoT38I	GRGCYC	4 cut(s)	180, 304, 318, 359
ErhI	CCWWGG	2 cut(s)	456, 1231
Esp3I	CGTCTC	1 cut(s)	457
FalI	AAGNNNNNCTT	4 cut(s)	1032, 1064, 1357, 1389
FaqI	GGGAC	6 cut(s)	137, 565, 580, 738, 1292, 1860
FauI	CCCGC	4 cut(s)	97, 291, 312, 1261
FauNDI	CATATG	1 cut(s)	790
FbaI	TGATCA	1 cut(s)	1675
FblI	GTMKAC	2 cut(s)	270, 276
Fnu4HI	GCNGC	9 cut(s)	402, 795, 879, 1173, 1293, 1457, 1500, 1790, 1891
FokI	GGATG	3 cut(s)	905, 1730, 1831
FriOI	GRGCYC	4 cut(s)	180, 304, 318, 359
Fsp4HI	GCNGC	9 cut(s)	402, 795, 879, 1173, 1293, 1457, 1500, 1790, 1891
FspBI	CTAG	8 cut(s)	411, 486, 699, 810, 1130, 1277, 1299, 1496
GlaI	GCGC	2 cut(s)	93, 369
GluI	GCNGC	9 cut(s)	402, 795, 879, 1173, 1293, 1457, 1500, 1790, 1891
GsuI	CTGGAG	4 cut(s)	164, 332, 927, 1329
HaeII	RGCGCY	1 cut(s)	371
HaeIII	GGCC	4 cut(s)	125, 302, 401, 848
HapII	CCGG	2 cut(s)	107, 1521
HhaI	GCGC	2 cut(s)	94, 370
Hin1I	GRCGYC	1 cut(s)	273
Hin6I	GCGC	2 cut(s)	92, 368
HinP1I	GCGC	2 cut(s)	92, 368
HincII	GTYRAC	3 cut(s)	250, 271, 277
HindII	GTYRAC	3 cut(s)	250, 271, 277
HindIII	AAGCTT	1 cut(s)	1710
HinfI	GANTC	8 cut(s)	65, 116, 278, 622, 1280, 1340, 1391, 1756
HpaII	CCGG	2 cut(s)	107, 1521
HphI	GGTGA	2 cut(s)	1631, 1842
Hpy166II	GTNNAC	4 cut(s)	250, 271, 277, 1925
Hpy8I	GTNNAC	4 cut(s)	250, 271, 277, 1925
Hpy99I	CGWCG	5 cut(s)	272, 275, 278, 290, 452
HpyAV	CCTTC	5 cut(s)	157, 166, 1145, 1335, 1876
HpyCH4III	ACNGT	2 cut(s)	1558, 1854
HpyCH4IV	ACGT	7 cut(s)	273, 440, 447, 1008, 1410, 1811, 1873
HpyF3I	CTNAG	3 cut(s)	254, 317, 575
HpySE526I	ACGT	7 cut(s)	273, 440, 447, 1008, 1410, 1811, 1873
Hsp92I	GRCGYC	1 cut(s)	273
HspAI	GCGC	2 cut(s)	92, 368
Ksp22I	TGATCA	1 cut(s)	1675
Kzo9I	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
LguI	GCTCTTC	1 cut(s)	101
LmnI	GCTCC	5 cut(s)	183, 312, 313, 424, 1529
Lsp1109I	GCAGC	5 cut(s)	781, 1184, 1468, 1801, 1902
LweI	GCATC	4 cut(s)	703, 748, 890, 1708
MabI	ACCWGGT	1 cut(s)	1072
MaeI	CTAG	8 cut(s)	411, 486, 699, 810, 1130, 1277, 1299, 1496
MaeII	ACGT	7 cut(s)	273, 440, 447, 1008, 1410, 1811, 1873
MaeIII	GTNAC	1 cut(s)	1619
MalI	GATC	8 cut(s)	9, 34, 172, 329, 394, 419, 689, 1677
MbiI	CCGCTC	2 cut(s)	307, 1502
MboI	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
MfeI	CAATTG	2 cut(s)	775, 1594
MflI	RGATCY	5 cut(s)	7, 32, 392, 417, 687
MhlI	GDGCHC	5 cut(s)	180, 304, 318, 359, 1276
MlyI	GAGTC	4 cut(s)	59, 110, 272, 1750
MmeI	TCCRAC	5 cut(s)	60, 78, 159, 954, 1379
Mph1103I	ATGCAT	2 cut(s)	950, 1723
MseI	TTAA	3 cut(s)	782, 854, 939
MslI	CAYNNNNRTG	2 cut(s)	756, 1748
MspA1I	CMGCKG	1 cut(s)	1175
MspCI	CTTAAG	1 cut(s)	781
MspI	CCGG	2 cut(s)	107, 1521
MspR9I	CCNGG	7 cut(s)	107, 311, 692, 722, 1074, 1089, 1533
MunI	CAATTG	2 cut(s)	775, 1594
Mva1269I	GAATGC	1 cut(s)	948
MvaI	CCWGG	6 cut(s)	311, 692, 722, 1074, 1089, 1533
MvnI	CGCG	2 cut(s)	92, 231
NciI	CCSGG	1 cut(s)	107
NdeI	CATATG	1 cut(s)	790
NdeII	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
NheI	GCTAGC	1 cut(s)	698
NlaIV	GGNNCC	7 cut(s)	9, 302, 303, 689, 849, 1229, 1525
NmeAIII	GCCGAG	1 cut(s)	430
NmuCI	GTSAC	1 cut(s)	1619
NsiI	ATGCAT	2 cut(s)	950, 1723
NspI	RCATGY	4 cut(s)	298, 595, 878, 1637
OliI	CACNNNNGTG	1 cut(s)	1748
PaeI	GCATGC	2 cut(s)	298, 595
PagI	TCATGA	2 cut(s)	1215, 1585
PceI	AGGCCT	1 cut(s)	125
PciI	ACATGT	1 cut(s)	1633
PciSI	GCTCTTC	1 cut(s)	101
PcsI	WCGNNNNNNNCGW	5 cut(s)	156, 243, 273, 282, 555
PctI	GAATGC	1 cut(s)	948
PfeI	GAWTC	4 cut(s)	622, 1280, 1340, 1391
PflFI	GACNNNGTC	1 cut(s)	245
PfoI	TCCNGGA	2 cut(s)	309, 1087
PkrI	GCNGC	9 cut(s)	403, 796, 880, 1174, 1294, 1458, 1501, 1791, 1892
PleI	GAGTC	4 cut(s)	59, 110, 272, 1750
PmaCI	CACGTG	1 cut(s)	1009
PmlI	CACGTG	1 cut(s)	1009
PpsI	GAGTC	4 cut(s)	59, 110, 272, 1750
Ppu21I	YACGTR	1 cut(s)	1009
PscI	ACATGT	1 cut(s)	1633
PshBI	ATTAAT	1 cut(s)	854
PsiI	TTATAA	2 cut(s)	1119, 1206
Psp124BI	GAGCTC	2 cut(s)	180, 318
Psp6I	CCWGG	6 cut(s)	309, 690, 720, 1072, 1087, 1531
PspCI	CACGTG	1 cut(s)	1009
PspGI	CCWGG	6 cut(s)	309, 690, 720, 1072, 1087, 1531
PspN4I	GGNNCC	7 cut(s)	9, 302, 303, 689, 849, 1229, 1525
PspOMI	GGGCCC	1 cut(s)	300
PspPI	GGNCC	3 cut(s)	300, 301, 847
PstNI	CAGNNNCTG	1 cut(s)	658
PsuI	RGATCY	5 cut(s)	7, 32, 392, 417, 687
PsyI	GACNNNGTC	1 cut(s)	245
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	5 cut(s)	1287, 1560, 1638, 1728, 1926
RsaNI	GTAC	5 cut(s)	1286, 1559, 1637, 1727, 1925
RseI	CAYNNNNRTG	2 cut(s)	756, 1748
SacI	GAGCTC	2 cut(s)	180, 318
SalI	GTCGAC	2 cut(s)	269, 275
SapI	GCTCTTC	1 cut(s)	101
SaqAI	TTAA	3 cut(s)	782, 854, 939
SatI	GCNGC	9 cut(s)	402, 795, 879, 1173, 1293, 1457, 1500, 1790, 1891
Sau3AI	GATC	8 cut(s)	7, 32, 170, 327, 392, 417, 687, 1675
Sau96I	GGNCC	3 cut(s)	300, 301, 847
SchI	GAGTC	4 cut(s)	59, 110, 272, 1750
ScrFI	CCNGG	7 cut(s)	107, 311, 692, 722, 1074, 1089, 1533
SduI	GDGCHC	5 cut(s)	180, 304, 318, 359, 1276
SexAI	ACCWGGT	1 cut(s)	1072
SfaNI	GCATC	4 cut(s)	703, 748, 890, 1708
SgrDI	CGTCGACG	1 cut(s)	269
SmiMI	CAYNNNNRTG	2 cut(s)	756, 1748
SmlI	CTYRAG	6 cut(s)	629, 781, 917, 1474, 1640, 1783
SmoI	CTYRAG	6 cut(s)	629, 781, 917, 1474, 1640, 1783
SpeI	ACTAGT	1 cut(s)	1298
SphI	GCATGC	2 cut(s)	298, 595
SseBI	AGGCCT	1 cut(s)	125
SspMI	CTAG	8 cut(s)	411, 486, 699, 810, 1130, 1277, 1299, 1496
SstI	GAGCTC	2 cut(s)	180, 318
StuI	AGGCCT	1 cut(s)	125
StyD4I	CCNGG	7 cut(s)	105, 309, 690, 720, 1072, 1087, 1531
StyI	CCWWGG	2 cut(s)	456, 1231
TaaI	ACNGT	2 cut(s)	1558, 1854
TaiI	ACGT	7 cut(s)	276, 443, 450, 1011, 1413, 1814, 1876
TatI	WGTACW	3 cut(s)	1285, 1636, 1924
TauI	GCSGC	4 cut(s)	404, 881, 1295, 1502
TfiI	GAWTC	4 cut(s)	622, 1280, 1340, 1391
Tru1I	TTAA	3 cut(s)	782, 854, 939
Tru9I	TTAA	3 cut(s)	782, 854, 939
TscAI	CASTG	1 cut(s)	619
TseFI	GTSAC	1 cut(s)	1619
TseI	GCWGC	5 cut(s)	794, 1172, 1456, 1789, 1890
Tsp45I	GTSAC	1 cut(s)	1619
TspDTI	ATGAA	9 cut(s)	635, 655, 927, 1204, 1232, 1304, 1574, 1581, 1641
TspGWI	ACGGA	3 cut(s)	337, 525, 1716
TspRI	CASTG	1 cut(s)	619
Tth111I	GACNNNGTC	1 cut(s)	245
Vha464I	CTTAAG	1 cut(s)	781
VspI	ATTAAT	1 cut(s)	854
XapI	RAATTY	8 cut(s)	520, 535, 965, 978, 994, 1103, 1184, 1568
XbaI	TCTAGA	1 cut(s)	1276
XceI	RCATGY	4 cut(s)	298, 595, 878, 1637
XmiI	GTMKAC	2 cut(s)	270, 276
XspI	CTAG	8 cut(s)	411, 486, 699, 810, 1130, 1277, 1299, 1496
ZraI	GACGTC	1 cut(s)	274
Zsp2I	ATGCAT	2 cut(s)	950, 1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.