Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017751.1

Orthogroup ID

OG0010367

Physical Location & Seq

Genomic Coordinates Forward (+)

1004 .. 8004

Gene Structure 7001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017751.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

atggcggatccaattccatcagcaccgcacagatccaacaccgacttcttctccgaccccctcgactcccaccccctctggttcaagcccgcgctcttcctctccccggacttcgactccgaggcctacatctccgacctccgaaccttcgtccccttcgacaccctccgatccgagctccagtcctatctcgcctccctcaaccacgacctcatcgacctcatcaaccgcgactacgccgacttcgtcaacctcagcaccaagctcgtcgacgtcgactccgccgtcgtgcgcatgcgggccccgctcctggagctcagggagaagatcgaccagttcagaggctccgtgcagggctcgcttgtggcgctgaccaatggattgaagcagagatccgaggccgccgaggctagggagatcttggagcttctgctcgatacgtttcacgtcgtctccaaggttgaaaaactaataaaggagttgcctagtgtgcctgccgattggtcaaacggagatgcaaatttagcagagaagaattttatcagcaacgggactaccgagaatgggacaaatctcagagatactcaaagcatgcttttggagagaattgccagtgagatgaatcgcctcaagttctatattgctcatgcacagaacctgcctttcattgaaaacatggagaagaggatccagggtgctagcctattattagatgctagcctgggacattgttttgtagatggactggaacatcgagatgcaaatgcaatttacaattgcttaagggcatatgctgccgttgataatactaggagtgcagaagaacttttccgaacaaccattgtggccccattaatacaaaaagttattccgcatggggcatcatgggcggatggaaagccatctggagacgaacttgagaatgattatcagcaaattaagcaatgcattcagaaagactgcaaatttttgttggaaatttcttttgaagaaaattctggtttgcacgtgttcgacttcttggcaaactcaattctcaaagaggttctttcagcaatccaaaaggggaaacctggtgctttttcacctggacgaccaacagaatttttgaaaaattataaatcaagcctcgagttcttggctcatctagaaggctactttccgtccagagcagctgttagtaaatttcgagcagaagccgtttatattgagttcatgaagcaatggaaccttggggtttatttctctttgaggtttcaggagattgcgggtgctctagattctgtacttgcggcgactagtcttgtccctgttcataatataccttctggtcaaggagattctccagacttgaaattaaaacaaagtgctactttgttagagtgcttggaatcctgttggagagaagacgttgttgttctttcttattctgacaagtttcttcgcttatccttgcagcttctttcaagatactcaagttggttgtcatctggactagctgctcggaagaggggtaataccggctccaatcctggctgtgaatgggctatttcaactgtaccagatgaatttatttatattattcatgacatcaattgtcttcacacaagggtttgtggtgactttctcgaacatgtacttgagcttctttcatcatgttctgccgatatacttgatcatgtaaaacagagcattttacacggaggaaaagcattggatgcattagtacctgccattatcaacactattgtggagactctggttgagaagtcggttgaggacttgaggcagctaaagggaataacagcaacgtacaggatgactaataaacctcttcctgtcagacactcaccgtatgtgtcgggagtattacgtcccctgaaggtctttttggatggggagcgagcttcaaggtacctgaaagaagatgctaagaatgaacttgtgcttagtgctgcgactgagattactggtcgttattatgagttagctgctgatctcgtcagtgtggctaggagaacagagacttcactccagagaataaggcaaggtgcacaaagaagaggtggagcaaacgcagatgtcttggatcacaatgtgtccgacactgacaagatttgcatgcaattattcctagacattcaggagtacggccgtaacctggcagtcctcggtgtagatgctgccaatatcaaatcgtaccgctcattgtgggaatgtgttgctcctgcagacaggcgaagtatcgactacagcgagtgcagaacgagcacgtcggggtttggtttgctctcaaccagattaatttggttttggtggttcactgttagaggagagatgatgtggtggaaaggctggccgccagaggacatgctacccgcggcgccgatggctaagcaacatcattgggcttcagtttatttagcttgggctattatgtctgggcttgattcaagcaagcagatttcaaagaagagcaagaagaccaacctgttgccaaggttgttagctgctatattttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005829 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008565 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016192 GO:0017119 GO:0031984 GO:0032991 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0048193 GO:0051179 GO:0051234 GO:0071702 GO:0071705 GO:0071840 GO:0098791 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG2 DUF3510

Protein Analysis

840

Amino Acids

94.23

Weight (kDa)

5.92

Isoelectric Point (pI)

39.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24840
fragaria_vesca	FvH4_5g08050 FvH4_5g08050 FvH4_5g08050
malus_domestica	MD06G1143400.v1.1 MD14G1158600.v1.1
prunus_persica	Prupe.5G152600_v2.0.a1
pyrus_communis	pycom06g13310 pycom14g13230
rosa_chinensis	RchiOBHm_Chr7g0190411
rosa_laevigata	RLG00000004535
rosa_multiflora	Rmu_sc0014718.1_g000002 Rmu_sc0017751.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264650
rosa_rugosa	Rorug06G0504500 Rorug06G0504600
rosa_samantha	Rh7AG110300 Rh7BG112800 Rh7CG115100 Rh7DG113400
rosa_wichuraiana	Rw7G009570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1119
AasI	GACNNNNNNGTC	1 cut(s)	284
AatII	GACGTC	1 cut(s)	276
Acc16I	TGCGCA	1 cut(s)	293
Acc36I	ACCTGC	2 cut(s)	666, 1738
Acc65I	GGTACC	1 cut(s)	1914
AccB1I	GGYRCC	2 cut(s)	1914, 2383
AccBSI	CCGCTC	2 cut(s)	307, 2205
AccI	GTMKAC	2 cut(s)	270, 276
AccII	CGCG	3 cut(s)	92, 231, 2381
AclWI	GGATC	8 cut(s)	2, 15, 27, 165, 387, 682, 695, 2097
AcoI	YGGCCR	2 cut(s)	2152, 2357
AcsI	RAATTY	8 cut(s)	520, 535, 965, 978, 994, 1103, 1184, 1568
AcuI	CTGAAG	2 cut(s)	1901, 2397
AcvI	CACGTG	1 cut(s)	1009
AcyI	GRCGYC	2 cut(s)	273, 2384
AdeI	CACNNNGTG	1 cut(s)	2098
AfaI	GTAC	8 cut(s)	1287, 1560, 1638, 1728, 1814, 1916, 2150, 2201
AfiI	CCNNNNNNNGG	5 cut(s)	106, 310, 411, 564, 2161
AflII	CTTAAG	1 cut(s)	781
AflIII	ACRYGT	2 cut(s)	1008, 1633
AhlI	ACTAGT	1 cut(s)	1298
AjiI	CACGTC	2 cut(s)	448, 2274
AjnI	CCWGG	7 cut(s)	309, 690, 720, 1072, 1087, 1531, 2160
AjuI	GAANNNNNNNTTGG	4 cut(s)	29, 61, 1874, 1906
AleI	CACNNNNGTG	1 cut(s)	1748
Alw21I	GWGCWC	5 cut(s)	180, 318, 1276, 2056, 2273
Alw26I	GTCTC	4 cut(s)	457, 903, 1748, 2018
Alw44I	GTGCAC	1 cut(s)	2052
AlwI	GGATC	8 cut(s)	2, 15, 27, 165, 387, 682, 695, 2097
AlwNI	CAGNNNCTG	1 cut(s)	658
Ama87I	CYCGRG	1 cut(s)	1130
AoxI	GGCC	6 cut(s)	123, 300, 399, 846, 2152, 2357
ApaI	GGGCCC	1 cut(s)	304
ApaLI	GTGCAC	1 cut(s)	2052
ApeKI	GCWGC	9 cut(s)	794, 1172, 1456, 1499, 1789, 1955, 1991, 2183, 2510
ApoI	RAATTY	8 cut(s)	520, 535, 965, 978, 994, 1103, 1184, 1568
AseI	ATTAAT	2 cut(s)	854, 2303
Asp718I	GGTACC	1 cut(s)	1914
AspLEI	GCGC	4 cut(s)	94, 294, 370, 2386
AspS9I	GGNCC	3 cut(s)	300, 301, 847
AsuC2I	CCSGG	1 cut(s)	107
AsuHPI	GGTGA	3 cut(s)	1077, 1631, 1842
AsuNHI	GCTAGC	2 cut(s)	698, 716
AvaI	CYCGRG	1 cut(s)	1130
BaeGI	GKGCMC	2 cut(s)	304, 2056
BaeI	ACNNNNGTAYC	2 cut(s)	1462, 1495
BamHI	GGATCC	2 cut(s)	7, 687
BanI	GGYRCC	2 cut(s)	1914, 2383
BanII	GRGCYC	4 cut(s)	180, 304, 318, 359
BarI	GAAGNNNNNNTAC	2 cut(s)	1629, 1661
BbrPI	CACGTG	1 cut(s)	1009
BbsI	GAAGAC	3 cut(s)	1413, 1592, 2489
Bbv12I	GWGCWC	5 cut(s)	180, 318, 1276, 2056, 2273
BbvCI	CCTCAGC	1 cut(s)	254
BbvI	GCAGC	9 cut(s)	781, 1184, 1468, 1486, 1801, 1942, 1978, 2170, 2497
BccI	CCATC	6 cut(s)	25, 734, 887, 910, 1889, 2383
BceAI	ACGGC	5 cut(s)	269, 782, 1184, 2139, 2167
BcgI	CGANNNNNNTGC	2 cut(s)	247, 281
BciT130I	CCWGG	7 cut(s)	311, 692, 722, 1074, 1089, 1533, 2162
BclI	TGATCA	1 cut(s)	1675
BcnI	CCSGG	1 cut(s)	107
BcoDI	GTCTC	4 cut(s)	457, 903, 1748, 2018
BcuI	ACTAGT	1 cut(s)	1298
BfmI	CTRYAG	2 cut(s)	2229, 2251
BfoI	RGCGCY	2 cut(s)	371, 2387
BfrI	CTTAAG	1 cut(s)	781
BfuAI	ACCTGC	2 cut(s)	666, 1738
BglI	GCCNNNNNGGC	1 cut(s)	407
BglII	AGATCT	1 cut(s)	417
BlpI	GCTNAGC	1 cut(s)	2394
Bme1390I	CCNGG	8 cut(s)	107, 311, 692, 722, 1074, 1089, 1533, 2162
BmeT110I	CYCGRG	1 cut(s)	1130
BmgBI	CACGTC	2 cut(s)	448, 2274
BmgT120I	GGNCC	3 cut(s)	300, 301, 847
BmrFI	CCNGG	8 cut(s)	107, 311, 692, 722, 1074, 1089, 1533, 2162
BmsI	GCATC	7 cut(s)	505, 703, 748, 890, 1708, 1918, 2170
BmtI	GCTAGC	2 cut(s)	702, 720
BpiI	GAAGAC	3 cut(s)	1413, 1592, 2489
BpmI	CTGGAG	5 cut(s)	164, 332, 927, 1329, 2018
Bpu10I	CCTNAGC	2 cut(s)	254, 317
Bpu1102I	GCTNAGC	1 cut(s)	2394
BpuEI	CTTGAG	5 cut(s)	614, 938, 1459, 1661, 1804
BpuMI	CCSGG	1 cut(s)	107
BsaAI	YACGTR	1 cut(s)	1009
BsaHI	GRCGYC	2 cut(s)	273, 2384
BsaXI	ACNNNNNCTCC	8 cut(s)	35, 65, 101, 131, 263, 293, 437, 467
Bsc4I	CCNNNNNNNGG	5 cut(s)	106, 310, 411, 564, 2161
Bse118I	RCCGGY	1 cut(s)	1520
Bse1I	ACTGG	5 cut(s)	181, 334, 612, 750, 1975
Bse3DI	GCAATG	2 cut(s)	950, 1229
BseBI	CCWGG	7 cut(s)	311, 692, 722, 1074, 1089, 1533, 2162
BseGI	GGATG	4 cut(s)	898, 1723, 1824, 1900
BseLI	CCNNNNNNNGG	5 cut(s)	106, 310, 411, 564, 2161
BseMI	GCAATG	2 cut(s)	950, 1229
BseMII	CTCAG	4 cut(s)	268, 331, 589, 1953
BseNI	ACTGG	5 cut(s)	181, 334, 612, 750, 1975
BseRI	GAGGAG	1 cut(s)	2346
BseSI	GKGCMC	2 cut(s)	304, 2056
BseX3I	CGGCCG	1 cut(s)	2152
BseXI	GCAGC	9 cut(s)	781, 1184, 1468, 1486, 1801, 1942, 1978, 2170, 2497
BsgI	GTGCAG	3 cut(s)	371, 837, 2281
Bsh1236I	CGCG	3 cut(s)	92, 231, 2381
Bsh1285I	CGRYCG	1 cut(s)	2155
BshFI	GGCC	6 cut(s)	125, 302, 401, 848, 2154, 2359
BshNI	GGYRCC	2 cut(s)	1914, 2383
BsiEI	CGRYCG	1 cut(s)	2155
BsiHKAI	GWGCWC	5 cut(s)	180, 318, 1276, 2056, 2273
BsiHKCI	CYCGRG	1 cut(s)	1130
BsiSI	CCGG	2 cut(s)	107, 1521
BslFI	GGGAC	6 cut(s)	137, 565, 580, 738, 1292, 1860
BslI	CCNNNNNNNGG	5 cut(s)	106, 310, 411, 564, 2161
BsmAI	GTCTC	4 cut(s)	457, 903, 1748, 2018
BsmBI	CGTCTC	2 cut(s)	457, 903
BsmFI	GGGAC	6 cut(s)	137, 565, 580, 738, 1292, 1860
BsmI	GAATGC	1 cut(s)	948
BsnI	GGCC	6 cut(s)	125, 302, 401, 848, 2154, 2359
BsoBI	CYCGRG	1 cut(s)	1130
Bsp120I	GGGCCC	1 cut(s)	300
Bsp1286I	GDGCHC	7 cut(s)	180, 304, 318, 359, 1276, 2056, 2273
Bsp1720I	GCTNAGC	1 cut(s)	2394
BspANI	GGCC	6 cut(s)	125, 302, 401, 848, 2154, 2359
BspCNI	CTCAG	4 cut(s)	267, 330, 588, 1954
BspFNI	CGCG	3 cut(s)	92, 231, 2381
BspHI	TCATGA	2 cut(s)	1215, 1585
BspMAI	CTGCAG	1 cut(s)	2233
BspMI	ACCTGC	2 cut(s)	666, 1738
BspOI	GCTAGC	2 cut(s)	702, 720
BspPI	GGATC	8 cut(s)	2, 15, 27, 165, 387, 682, 695, 2097
BspQI	GCTCTTC	2 cut(s)	101, 2468
BspT107I	GGYRCC	2 cut(s)	1914, 2383
BspTI	CTTAAG	1 cut(s)	781
BsrBI	CCGCTC	2 cut(s)	307, 2205
BsrDI	GCAATG	2 cut(s)	950, 1229
BsrFI	RCCGGY	1 cut(s)	1520
BsrI	ACTGG	5 cut(s)	181, 334, 612, 750, 1975
BssAI	RCCGGY	1 cut(s)	1520
BssNI	GRCGYC	2 cut(s)	273, 2384
BssT1I	CCWWGG	3 cut(s)	456, 1231, 2498
Bst2UI	CCWGG	7 cut(s)	311, 692, 722, 1074, 1089, 1533, 2162
Bst4CI	ACNGT	3 cut(s)	1558, 1854, 2326
Bst6I	CTCTTC	6 cut(s)	101, 677, 1502, 1839, 2056, 2468
BstACI	GRCGYC	2 cut(s)	273, 2384
BstAFI	CTTAAG	1 cut(s)	781
BstAPI	GCANNNNNTGC	2 cut(s)	794, 1718
BstBAI	YACGTR	1 cut(s)	1009
BstDEI	CTNAG	7 cut(s)	254, 317, 575, 1932, 1949, 1962, 2394
BstDSI	CCRYGG	1 cut(s)	2379
BstF5I	GGATG	4 cut(s)	898, 1723, 1824, 1900
BstFNI	CGCG	3 cut(s)	92, 231, 2381
BstH2I	RGCGCY	2 cut(s)	371, 2387
BstHHI	GCGC	4 cut(s)	94, 294, 370, 2386
BstMAI	GTCTC	4 cut(s)	457, 903, 1748, 2018
BstMCI	CGRYCG	1 cut(s)	2155
BstNI	CCWGG	7 cut(s)	311, 692, 722, 1074, 1089, 1533, 2162
BstNSI	RCATGY	5 cut(s)	298, 595, 1637, 2125, 2374
BstSCI	CCNGG	8 cut(s)	105, 309, 690, 720, 1072, 1087, 1531, 2160
BstSFI	CTRYAG	2 cut(s)	2229, 2251
BstSLI	GKGCMC	2 cut(s)	304, 2056
BstUI	CGCG	3 cut(s)	92, 231, 2381
BstV1I	GCAGC	9 cut(s)	781, 1184, 1468, 1486, 1801, 1942, 1978, 2170, 2497
BstV2I	GAAGAC	3 cut(s)	1413, 1592, 2489
BstX2I	RGATCY	5 cut(s)	7, 32, 392, 417, 687
BstYI	RGATCY	5 cut(s)	7, 32, 392, 417, 687
BstZI	CGGCCG	1 cut(s)	2152
BsuRI	GGCC	6 cut(s)	125, 302, 401, 848, 2154, 2359
BtgI	CCRYGG	1 cut(s)	2379
BtrI	CACGTC	2 cut(s)	448, 2274
BtsCI	GGATG	4 cut(s)	898, 1723, 1824, 1900
BtsIMutI	CAGTG	4 cut(s)	619, 2011, 2106, 2322
BveI	ACCTGC	2 cut(s)	666, 1738
CaiI	CAGNNNCTG	1 cut(s)	658
CciI	TCATGA	2 cut(s)	1215, 1585
CfoI	GCGC	4 cut(s)	94, 294, 370, 2386
Cfr10I	RCCGGY	1 cut(s)	1520
Cfr13I	GGNCC	3 cut(s)	300, 301, 847
Cfr42I	CCGCGG	1 cut(s)	2382
CsiI	ACCWGGT	1 cut(s)	1072
Csp6I	GTAC	8 cut(s)	1286, 1559, 1637, 1727, 1813, 1915, 2149, 2200
CspCI	CAANNNNNGTGG	2 cut(s)	825, 860
CviQI	GTAC	8 cut(s)	1286, 1559, 1637, 1727, 1813, 1915, 2149, 2200
DdeI	CTNAG	7 cut(s)	254, 317, 575, 1932, 1949, 1962, 2394
DinI	GGCGCC	1 cut(s)	2385
DraIII	CACNNNGTG	1 cut(s)	2098
DrdI	GACNNNNNNGTC	1 cut(s)	284
DseDI	GACNNNNNNGTC	1 cut(s)	284
EaeI	YGGCCR	2 cut(s)	2152, 2357
EagI	CGGCCG	1 cut(s)	2152
Eam1104I	CTCTTC	6 cut(s)	101, 677, 1502, 1839, 2056, 2468
EarI	CTCTTC	6 cut(s)	101, 677, 1502, 1839, 2056, 2468
EciI	GGCGGA	3 cut(s)	20, 271, 905
Ecl136II	GAGCTC	2 cut(s)	178, 316
EclXI	CGGCCG	1 cut(s)	2152
Eco130I	CCWWGG	3 cut(s)	456, 1231, 2498
Eco147I	AGGCCT	1 cut(s)	125
Eco24I	GRGCYC	4 cut(s)	180, 304, 318, 359
Eco52I	CGGCCG	1 cut(s)	2152
Eco53kI	GAGCTC	2 cut(s)	178, 316
Eco57I	CTGAAG	2 cut(s)	1901, 2397
Eco72I	CACGTG	1 cut(s)	1009
Eco88I	CYCGRG	1 cut(s)	1130
EcoICRI	GAGCTC	2 cut(s)	178, 316
EcoO109I	RGGNCCY	1 cut(s)	301
EcoRII	CCWGG	7 cut(s)	309, 690, 720, 1072, 1087, 1531, 2160
EcoT14I	CCWWGG	3 cut(s)	456, 1231, 2498
EcoT22I	ATGCAT	2 cut(s)	950, 1723
EcoT38I	GRGCYC	4 cut(s)	180, 304, 318, 359
EgeI	GGCGCC	1 cut(s)	2385
EheI	GGCGCC	1 cut(s)	2385
ErhI	CCWWGG	3 cut(s)	456, 1231, 2498
Esp3I	CGTCTC	2 cut(s)	457, 903
FalI	AAGNNNNNCTT	4 cut(s)	1032, 1064, 1357, 1389
FaqI	GGGAC	6 cut(s)	137, 565, 580, 738, 1292, 1860
FauI	CCCGC	5 cut(s)	97, 291, 312, 1261, 2386
FauNDI	CATATG	1 cut(s)	790
FbaI	TGATCA	1 cut(s)	1675
FblI	GTMKAC	2 cut(s)	270, 276
FokI	GGATG	4 cut(s)	905, 1730, 1831, 1907
FriOI	GRGCYC	4 cut(s)	180, 304, 318, 359
FspAI	RTGCGCAY	1 cut(s)	293
FspI	TGCGCA	1 cut(s)	293
GlaI	GCGC	4 cut(s)	93, 293, 369, 2385
GsuI	CTGGAG	5 cut(s)	164, 332, 927, 1329, 2018
HaeII	RGCGCY	2 cut(s)	371, 2387
HaeIII	GGCC	6 cut(s)	125, 302, 401, 848, 2154, 2359
HapII	CCGG	2 cut(s)	107, 1521
HhaI	GCGC	4 cut(s)	94, 294, 370, 2386
Hin1I	GRCGYC	2 cut(s)	273, 2384
Hin6I	GCGC	4 cut(s)	92, 292, 368, 2384
HinP1I	GCGC	4 cut(s)	92, 292, 368, 2384
HincII	GTYRAC	3 cut(s)	250, 271, 277
HindII	GTYRAC	3 cut(s)	250, 271, 277
HinfI	GANTC	9 cut(s)	65, 116, 278, 622, 1280, 1340, 1391, 1756, 2450
HpaII	CCGG	2 cut(s)	107, 1521
HphI	GGTGA	3 cut(s)	1077, 1631, 1842
Hpy166II	GTNNAC	5 cut(s)	250, 271, 277, 2054, 2322
Hpy8I	GTNNAC	5 cut(s)	250, 271, 277, 2054, 2322
Hpy99I	CGWCG	6 cut(s)	272, 275, 278, 290, 452, 2278
HpyAV	CCTTC	5 cut(s)	157, 166, 1145, 1335, 1876
HpyCH4III	ACNGT	3 cut(s)	1558, 1854, 2326
HpyCH4IV	ACGT	8 cut(s)	273, 440, 447, 1008, 1410, 1811, 1873, 2273
HpyF3I	CTNAG	7 cut(s)	254, 317, 575, 1932, 1949, 1962, 2394
HpySE526I	ACGT	8 cut(s)	273, 440, 447, 1008, 1410, 1811, 1873, 2273
Hsp92I	GRCGYC	2 cut(s)	273, 2384
HspAI	GCGC	4 cut(s)	92, 292, 368, 2384
KasI	GGCGCC	1 cut(s)	2383
KpnI	GGTACC	1 cut(s)	1918
Ksp22I	TGATCA	1 cut(s)	1675
KspI	CCGCGG	1 cut(s)	2382
LguI	GCTCTTC	2 cut(s)	101, 2468
LmnI	GCTCC	9 cut(s)	183, 312, 313, 350, 424, 1529, 1900, 2069, 2230
Lsp1109I	GCAGC	9 cut(s)	781, 1184, 1468, 1486, 1801, 1942, 1978, 2170, 2497
LweI	GCATC	7 cut(s)	505, 703, 748, 890, 1708, 1918, 2170
MabI	ACCWGGT	1 cut(s)	1072
MaeII	ACGT	8 cut(s)	273, 440, 447, 1008, 1410, 1811, 1873, 2273
MaeIII	GTNAC	2 cut(s)	1619, 2156
MbiI	CCGCTC	2 cut(s)	307, 2205
MfeI	CAATTG	2 cut(s)	775, 1594
MflI	RGATCY	5 cut(s)	7, 32, 392, 417, 687
MhlI	GDGCHC	7 cut(s)	180, 304, 318, 359, 1276, 2056, 2273
Mly113I	GGCGCC	1 cut(s)	2384
MlyI	GAGTC	4 cut(s)	59, 110, 272, 1750
MmeI	TCCRAC	6 cut(s)	60, 78, 159, 954, 1379, 2127
Mph1103I	ATGCAT	2 cut(s)	950, 1723
MseI	TTAA	5 cut(s)	782, 854, 939, 1358, 2303
MslI	CAYNNNNRTG	2 cut(s)	756, 1748
MspA1I	CMGCKG	2 cut(s)	1175, 2381
MspCI	CTTAAG	1 cut(s)	781
MspI	CCGG	2 cut(s)	107, 1521
MspR9I	CCNGG	8 cut(s)	107, 311, 692, 722, 1074, 1089, 1533, 2162
MunI	CAATTG	2 cut(s)	775, 1594
Mva1269I	GAATGC	1 cut(s)	948
MvaI	CCWGG	7 cut(s)	311, 692, 722, 1074, 1089, 1533, 2162
MvnI	CGCG	3 cut(s)	92, 231, 2381
NarI	GGCGCC	1 cut(s)	2384
NciI	CCSGG	1 cut(s)	107
NdeI	CATATG	1 cut(s)	790
NheI	GCTAGC	2 cut(s)	698, 716
NmeAIII	GCCGAG	1 cut(s)	430
NmuCI	GTSAC	1 cut(s)	1619
NsbI	TGCGCA	1 cut(s)	293
NsiI	ATGCAT	2 cut(s)	950, 1723
NspI	RCATGY	5 cut(s)	298, 595, 1637, 2125, 2374
OliI	CACNNNNGTG	1 cut(s)	1748
PaeI	GCATGC	3 cut(s)	298, 595, 2125
PaeR7I	CTCGAG	1 cut(s)	1130
PagI	TCATGA	2 cut(s)	1215, 1585
PceI	AGGCCT	1 cut(s)	125
PciI	ACATGT	1 cut(s)	1633
PciSI	GCTCTTC	2 cut(s)	101, 2468
PcsI	WCGNNNNNNNCGW	7 cut(s)	156, 213, 243, 273, 282, 555, 2253
PctI	GAATGC	1 cut(s)	948
PfeI	GAWTC	5 cut(s)	622, 1280, 1340, 1391, 2450
PflFI	GACNNNGTC	1 cut(s)	245
PfoI	TCCNGGA	1 cut(s)	309
PleI	GAGTC	4 cut(s)	59, 110, 272, 1750
PluTI	GGCGCC	1 cut(s)	2387
PmaCI	CACGTG	1 cut(s)	1009
PmlI	CACGTG	1 cut(s)	1009
PpsI	GAGTC	4 cut(s)	59, 110, 272, 1750
Ppu21I	YACGTR	1 cut(s)	1009
PscI	ACATGT	1 cut(s)	1633
PshBI	ATTAAT	2 cut(s)	854, 2303
PsiI	TTATAA	1 cut(s)	1119
Psp124BI	GAGCTC	2 cut(s)	180, 318
Psp6I	CCWGG	7 cut(s)	309, 690, 720, 1072, 1087, 1531, 2160
PspCI	CACGTG	1 cut(s)	1009
PspGI	CCWGG	7 cut(s)	309, 690, 720, 1072, 1087, 1531, 2160
PspOMI	GGGCCC	1 cut(s)	300
PspPI	GGNCC	3 cut(s)	300, 301, 847
PspXI	VCTCGAGB	1 cut(s)	1130
PstI	CTGCAG	1 cut(s)	2233
PstNI	CAGNNNCTG	1 cut(s)	658
PsuI	RGATCY	5 cut(s)	7, 32, 392, 417, 687
PsyI	GACNNNGTC	1 cut(s)	245
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	8 cut(s)	1287, 1560, 1638, 1728, 1814, 1916, 2150, 2201
RsaNI	GTAC	8 cut(s)	1286, 1559, 1637, 1727, 1813, 1915, 2149, 2200
RseI	CAYNNNNRTG	2 cut(s)	756, 1748
SacI	GAGCTC	2 cut(s)	180, 318
SacII	CCGCGG	1 cut(s)	2382
SalI	GTCGAC	2 cut(s)	269, 275
SapI	GCTCTTC	2 cut(s)	101, 2468
SaqAI	TTAA	5 cut(s)	782, 854, 939, 1358, 2303
Sau96I	GGNCC	3 cut(s)	300, 301, 847
SchI	GAGTC	4 cut(s)	59, 110, 272, 1750
ScrFI	CCNGG	8 cut(s)	107, 311, 692, 722, 1074, 1089, 1533, 2162
SduI	GDGCHC	7 cut(s)	180, 304, 318, 359, 1276, 2056, 2273
SexAI	ACCWGGT	1 cut(s)	1072
SfaNI	GCATC	7 cut(s)	505, 703, 748, 890, 1708, 1918, 2170
SfcI	CTRYAG	2 cut(s)	2229, 2251
SfoI	GGCGCC	1 cut(s)	2385
Sfr274I	CTCGAG	1 cut(s)	1130
Sfr303I	CCGCGG	1 cut(s)	2382
SgrBI	CCGCGG	1 cut(s)	2382
SgrDI	CGTCGACG	1 cut(s)	269
SlaI	CTCGAG	1 cut(s)	1130
SmiMI	CAYNNNNRTG	2 cut(s)	756, 1748
SmlI	CTYRAG	7 cut(s)	629, 781, 917, 1130, 1474, 1640, 1783
SmoI	CTYRAG	7 cut(s)	629, 781, 917, 1130, 1474, 1640, 1783
SpeI	ACTAGT	1 cut(s)	1298
SphI	GCATGC	3 cut(s)	298, 595, 2125
SseBI	AGGCCT	1 cut(s)	125
SspDI	GGCGCC	1 cut(s)	2383
SstI	GAGCTC	2 cut(s)	180, 318
StuI	AGGCCT	1 cut(s)	125
StyD4I	CCNGG	8 cut(s)	105, 309, 690, 720, 1072, 1087, 1531, 2160
StyI	CCWWGG	3 cut(s)	456, 1231, 2498
TaaI	ACNGT	3 cut(s)	1558, 1854, 2326
TaiI	ACGT	8 cut(s)	276, 443, 450, 1011, 1413, 1814, 1876, 2276
TatI	WGTACW	2 cut(s)	1285, 1636
TauI	GCSGC	4 cut(s)	404, 1295, 2362, 2384
TfiI	GAWTC	5 cut(s)	622, 1280, 1340, 1391, 2450
Tru1I	TTAA	5 cut(s)	782, 854, 939, 1358, 2303
Tru9I	TTAA	5 cut(s)	782, 854, 939, 1358, 2303
TscAI	CASTG	4 cut(s)	619, 2011, 2113, 2329
TseFI	GTSAC	1 cut(s)	1619
TseI	GCWGC	9 cut(s)	794, 1172, 1456, 1499, 1789, 1955, 1991, 2183, 2510
Tsp45I	GTSAC	1 cut(s)	1619
TspDTI	ATGAA	9 cut(s)	635, 655, 1204, 1232, 1304, 1574, 1581, 1641, 1953
TspGWI	ACGGA	4 cut(s)	337, 525, 1152, 1716
TspRI	CASTG	4 cut(s)	619, 2011, 2113, 2329
Tth111I	GACNNNGTC	1 cut(s)	245
Vha464I	CTTAAG	1 cut(s)	781
VneI	GTGCAC	1 cut(s)	2052
VspI	ATTAAT	2 cut(s)	854, 2303
XapI	RAATTY	8 cut(s)	520, 535, 965, 978, 994, 1103, 1184, 1568
XbaI	TCTAGA	2 cut(s)	1147, 1276
XceI	RCATGY	5 cut(s)	298, 595, 1637, 2125, 2374
XhoI	CTCGAG	1 cut(s)	1130
XmiI	GTMKAC	2 cut(s)	270, 276
ZraI	GACGTC	1 cut(s)	274
Zsp2I	ATGCAT	2 cut(s)	950, 1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.