Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0010367

Physical Location & Seq

Genomic Coordinates Forward (+)

8473774 .. 8478473

Gene Structure 4700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG112800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGAATCTCTCTCTATCTGAACAACAAAGAAAGAAGAACCGAAACTCATACGAAACGGCAAGTGATCCAATGGCGGATCCAATTCCATCAGCACCGCACAGATCCAACACCGACTTCTTCTCCGACCCCCTCGACTCCCACCCCCTCTGGTTCAAGCCCGCGCTCTTCCTCTCCCCGGACTTCGACTCCGAGGCCTACATCTCCGACCTCCGAACCTTCGTCCCCTTCGACACCCTCCGATCCGAGCTCCACTCCTATCTCGCCTCCCTCAACCACGACCTCATCGACCTCATCAACCGCGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACTCCGCCGTGGTGCGCATGCGGGCCCCGCTCCTGGAGCTCAGGGAGAAGATCGAGCAGTTCAGAGGCTCCGTGCAGGGCTCGCTTGTGGCGCTGACCAATGGATTGAAGCAGAGATCCGAGGCCGCCGAGGCTAGGGAGATCTTGGAGCTTCTGCTCGATACGTTTCACGTCGTCTCCAAGGTTGAAAAACTAATAAAGGAGTTGCCTAGTGTGCCTGCCGATTGGTCAAACGGAGATGTAAATTTAGCAGAGAAGAATTTTATCAGTAACGGGACTACCGAGAATGGGACAAATCTCAGAGATACTCAAAGCATGCTTTTGGAGAGAATTGCCAGTGAGATGAATCGCCTCAAGTTCTATATTGCTCATGCACAGAACCTGCCTTTCATTGAAAACATGGAGAAGAGGATCCAGGGTGCTAGCCTATTATTAGATGCCAGCCTGGGACATTGTTTTGTAGATGGACTGGAACATCGAGATGCAAATGCAATTTACAATTGCTTAAGGGCATATGCTGCCATTGATAATACTAGGAGTGCAGAAGAACTTTTCCGAACAACCATTGTGGCCCCATTAATACAAAAAGTTATTCCGCATGGGACATCATGGGCGGATGGAAAGCCATCTGGAGATGAACTTGAGAATGATTATCAGCAAATTAAGCAATGCATTCAGAAAGACTGCAAATTTTTGTTGGAAATTTCTTTTGAAGAAAATTCTGGTTTGCACGTGTTCGACTTCTTGGCAAACTCAATTCTCAAAGAGGTTCTTTCAGCAATCCAAAAGGGAAAACCTGGTGCTTTTTCTCCTGGACGACCAACAGAATTTTTGAAAAATTATAAATCAAGCCTAGAGTTCTTGGCTCATCTAGAAGGCTACTTTCCGTCCAGAGCAGCTGTTAGTAAATTTCGAGCAGAAGCCGTTTATAATGAGTTCATGAAGCAATGGAACCTTGGGGTTTATTTCTCTTTGAGGTTTCAGGAGATTGCGGGTGCTCTAGATTCTGTACTTGCGGCGACTAGTCTTGTCCCTGTTCATAATATACCTTCTGGTCAAGGAGATTCTCCAGACTTGACATTAAAACAAAGTGCTACTTTGTTAGAGTGCTTGGAATCCTGTTGGAGAGAAGACGTTGTTGTTCTTTCTTATTCTGACAAGTTTCTTCGCTTATCCTTGCAGCTTCTTTCAAGATACTCAAGTTGGTTGTCATCTGGACTAGCTGCTCGGAAGAGGGGTAATACCAGCTCCAATCCTGGCTGTGAATGGGCTATTTCAACTGTACCAGATGAATTTATTTATATTATTCATGACATCAATTGTCTTCACACAAGGGTTTGTGGTGACTTTCTCGAACATGTACTTGAGCTTCTTTCATCATGTTCTGGCGATATACTTGATCATGTAAAACAGAGCATTTTACACGGAGGAAAAGCATTGGATGCATTAGTACCTGCCATTATCAACACTATTGTGGAGACTCTGGTTGAGAAGTCTGTCGAGGACTTGAGGCAGCTAAAGGGAATAACAGCAACGTACAGGATGACTAATAAACCTCTTCCTGTCAGACACTCACCGTATGTGTCGGGAGTATTACGTCCCCTGAAGGTTTTTTTGGATGGGGAGCGAGCTTCAAGGTACCTGAAAGAAGATGCTAAGAATGAACTTGTGCTTAGTGCTGCGACTGAGATTACTGGTCGTTATTATGAGTTAGCTGCTGATCTCGTCAGTGTGGCTAGGAGAACAGAGACTTCACTCCAGAGAATAAGGCAAGGTGCACAAAGAAGAGGTGGAGCAAACGCAGATGTCTTGGATCACAATGTGTCCGACACTGACAAGATTTGCATGCAATTATTCCTAGACATTCAGGAGTACGGCCGTAACCTGGCAGTCCTTGGTGTAGATGCTTCCAATATCAAATCGTACCGCTCATTGTGGGAATGTGTTGCTCCTGCAGACAGGCGAAGTGTGATTAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005829 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008565 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016192 GO:0017119 GO:0031984 GO:0032991 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0048193 GO:0051179 GO:0051234 GO:0071702 GO:0071705 GO:0071840 GO:0098791 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG2 DUF3510

Protein Analysis

775

Amino Acids

86.8

Weight (kDa)

5.61

Isoelectric Point (pI)

39.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG2_N	PF06148	49 - 123	8.5e-26	COG2 N-terminal
COG2_C	PF12022	430 - 737	8.4e-99	COG complex component, COG2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24840
fragaria_vesca	FvH4_5g08050 FvH4_5g08050 FvH4_5g08050
malus_domestica	MD06G1143400.v1.1 MD14G1158600.v1.1
prunus_persica	Prupe.5G152600_v2.0.a1
pyrus_communis	pycom06g13310 pycom14g13230
rosa_chinensis	RchiOBHm_Chr7g0190411
rosa_laevigata	RLG00000004535
rosa_multiflora	Rmu_sc0014718.1_g000002 Rmu_sc0017751.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264650
rosa_rugosa	Rorug06G0504500 Rorug06G0504600
rosa_samantha	Rh7AG110300 Rh7BG112800 Rh7CG115100 Rh7DG113400
rosa_wichuraiana	Rw7G009570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1188, 1275
AatII	GACGTC	1 cut(s)	345
Acc16I	TGCGCA	1 cut(s)	362
Acc36I	ACCTGC	2 cut(s)	735, 1807
Acc65I	GGTACC	1 cut(s)	1983
AccB1I	GGYRCC	1 cut(s)	1983
AccBSI	CCGCTC	2 cut(s)	376, 2274
AccI	GTMKAC	2 cut(s)	339, 345
AccII	CGCG	2 cut(s)	161, 300
AclWI	GGATC	9 cut(s)	59, 71, 84, 96, 234, 456, 751, 764, 2166
AcoI	YGGCCR	1 cut(s)	2221
AcsI	RAATTY	8 cut(s)	589, 604, 1034, 1047, 1063, 1172, 1253, 1637
AcuI	CTGAAG	1 cut(s)	1970
AcvI	CACGTG	1 cut(s)	1078
AcyI	GRCGYC	1 cut(s)	342
AdeI	CACNNNGTG	1 cut(s)	2167
AfaI	GTAC	8 cut(s)	1356, 1629, 1707, 1797, 1883, 1985, 2219, 2270
AfiI	CCNNNNNNNGG	5 cut(s)	175, 379, 480, 633, 2230
AflII	CTTAAG	1 cut(s)	850
AflIII	ACRYGT	2 cut(s)	1077, 1702
AgsI	TTSAA	9 cut(s)	154, 454, 533, 740, 1058, 1180, 1536, 1623, 1980
AhlI	ACTAGT	1 cut(s)	1367
AjiI	CACGTC	1 cut(s)	517
AjnI	CCWGG	7 cut(s)	378, 759, 789, 1141, 1156, 1600, 2229
AjuI	GAANNNNNNNTTGG	4 cut(s)	98, 130, 1943, 1975
AleI	CACNNNNGTG	1 cut(s)	1817
Alw21I	GWGCWC	4 cut(s)	249, 387, 1345, 2125
Alw26I	GTCTC	3 cut(s)	526, 1817, 2087
Alw44I	GTGCAC	1 cut(s)	2121
AlwI	GGATC	9 cut(s)	59, 71, 84, 96, 234, 456, 751, 764, 2166
AlwNI	CAGNNNCTG	1 cut(s)	727
AoxI	GGCC	5 cut(s)	192, 369, 468, 915, 2221
ApaI	GGGCCC	1 cut(s)	373
ApaLI	GTGCAC	1 cut(s)	2121
ApeKI	GCWGC	7 cut(s)	863, 1241, 1525, 1568, 1858, 2024, 2060
ApoI	RAATTY	8 cut(s)	589, 604, 1034, 1047, 1063, 1172, 1253, 1637
AseI	ATTAAT	2 cut(s)	923, 2319
Asp718I	GGTACC	1 cut(s)	1983
AspLEI	GCGC	3 cut(s)	163, 363, 439
AspS9I	GGNCC	3 cut(s)	369, 370, 916
AsuC2I	CCSGG	1 cut(s)	176
AsuHPI	GGTGA	2 cut(s)	1700, 1911
AsuNHI	GCTAGC	1 cut(s)	767
BaeGI	GKGCMC	2 cut(s)	373, 2125
BaeI	ACNNNNGTAYC	2 cut(s)	1531, 1564
BamHI	GGATCC	2 cut(s)	76, 756
BanI	GGYRCC	1 cut(s)	1983
BanII	GRGCYC	4 cut(s)	249, 373, 387, 428
BarI	GAAGNNNNNNTAC	2 cut(s)	1698, 1730
BbrPI	CACGTG	1 cut(s)	1078
BbsI	GAAGAC	2 cut(s)	1482, 1661
Bbv12I	GWGCWC	4 cut(s)	249, 387, 1345, 2125
BbvCI	CCTCAGC	1 cut(s)	323
BbvI	GCAGC	7 cut(s)	850, 1253, 1537, 1555, 1870, 2011, 2047
BccI	CCATC	5 cut(s)	94, 803, 956, 979, 1958
BceAI	ACGGC	5 cut(s)	72, 338, 1253, 2208, 2236
BcgI	CGANNNNNNTGC	2 cut(s)	316, 350
BciT130I	CCWGG	7 cut(s)	380, 761, 791, 1143, 1158, 1602, 2231
BclI	TGATCA	1 cut(s)	1744
BcnI	CCSGG	1 cut(s)	176
BcoDI	GTCTC	3 cut(s)	526, 1817, 2087
BcuI	ACTAGT	1 cut(s)	1367
BfmI	CTRYAG	1 cut(s)	2298
BfoI	RGCGCY	1 cut(s)	440
BfrI	CTTAAG	1 cut(s)	850
BfuAI	ACCTGC	2 cut(s)	735, 1807
BglI	GCCNNNNNGGC	1 cut(s)	476
BglII	AGATCT	1 cut(s)	486
BisI	GCNGC	9 cut(s)	471, 864, 1242, 1362, 1526, 1569, 1859, 2025, 2061
BlsI	GCNGC	9 cut(s)	472, 865, 1243, 1363, 1527, 1570, 1860, 2026, 2062
Bme1390I	CCNGG	8 cut(s)	176, 380, 761, 791, 1143, 1158, 1602, 2231
BmgBI	CACGTC	1 cut(s)	517
BmgT120I	GGNCC	3 cut(s)	369, 370, 916
BmiI	GGNNCC	8 cut(s)	78, 371, 372, 415, 758, 918, 1298, 1985
BmrFI	CCNGG	8 cut(s)	176, 380, 761, 791, 1143, 1158, 1602, 2231
BmsI	GCATC	5 cut(s)	772, 817, 1777, 1987, 2239
BmtI	GCTAGC	1 cut(s)	771
BpiI	GAAGAC	2 cut(s)	1482, 1661
BplI	GAGNNNNNCTC	2 cut(s)	236, 268
BpmI	CTGGAG	4 cut(s)	401, 996, 1398, 2087
Bpu10I	CCTNAGC	2 cut(s)	323, 386
BpuEI	CTTGAG	5 cut(s)	683, 1007, 1528, 1730, 1873
BpuMI	CCSGG	1 cut(s)	176
BsaAI	YACGTR	1 cut(s)	1078
BsaHI	GRCGYC	1 cut(s)	342
BsaXI	ACNNNNNCTCC	8 cut(s)	104, 134, 170, 200, 332, 362, 506, 536
Bsc4I	CCNNNNNNNGG	5 cut(s)	175, 379, 480, 633, 2230
Bse1I	ACTGG	3 cut(s)	681, 819, 2044
Bse3DI	GCAATG	2 cut(s)	1019, 1298
BseBI	CCWGG	7 cut(s)	380, 761, 791, 1143, 1158, 1602, 2231
BseGI	GGATG	4 cut(s)	967, 1792, 1893, 1969
BseLI	CCNNNNNNNGG	5 cut(s)	175, 379, 480, 633, 2230
BseMI	GCAATG	2 cut(s)	1019, 1298
BseMII	CTCAG	4 cut(s)	337, 400, 658, 2022
BseNI	ACTGG	3 cut(s)	681, 819, 2044
BseSI	GKGCMC	2 cut(s)	373, 2125
BseX3I	CGGCCG	1 cut(s)	2221
BseXI	GCAGC	7 cut(s)	850, 1253, 1537, 1555, 1870, 2011, 2047
BsgI	GTGCAG	2 cut(s)	440, 906
Bsh1236I	CGCG	2 cut(s)	161, 300
Bsh1285I	CGRYCG	1 cut(s)	2224
BshFI	GGCC	5 cut(s)	194, 371, 470, 917, 2223
BshNI	GGYRCC	1 cut(s)	1983
BsiEI	CGRYCG	1 cut(s)	2224
BsiHKAI	GWGCWC	4 cut(s)	249, 387, 1345, 2125
BsiSI	CCGG	1 cut(s)	176
BslFI	GGGAC	7 cut(s)	206, 634, 649, 807, 961, 1361, 1929
BslI	CCNNNNNNNGG	5 cut(s)	175, 379, 480, 633, 2230
BsmAI	GTCTC	3 cut(s)	526, 1817, 2087
BsmBI	CGTCTC	1 cut(s)	526
BsmFI	GGGAC	7 cut(s)	206, 634, 649, 807, 961, 1361, 1929
BsmI	GAATGC	1 cut(s)	1017
BsnI	GGCC	5 cut(s)	194, 371, 470, 917, 2223
Bsp120I	GGGCCC	1 cut(s)	369
Bsp1286I	GDGCHC	6 cut(s)	249, 373, 387, 428, 1345, 2125
BspANI	GGCC	5 cut(s)	194, 371, 470, 917, 2223
BspCNI	CTCAG	4 cut(s)	336, 399, 657, 2023
BspFNI	CGCG	2 cut(s)	161, 300
BspHI	TCATGA	2 cut(s)	1284, 1654
BspLI	GGNNCC	8 cut(s)	78, 371, 372, 415, 758, 918, 1298, 1985
BspMAI	CTGCAG	1 cut(s)	2302
BspMI	ACCTGC	2 cut(s)	735, 1807
BspOI	GCTAGC	1 cut(s)	771
BspPI	GGATC	9 cut(s)	59, 71, 84, 96, 234, 456, 751, 764, 2166
BspQI	GCTCTTC	1 cut(s)	170
BspT107I	GGYRCC	1 cut(s)	1983
BspTI	CTTAAG	1 cut(s)	850
BsrBI	CCGCTC	2 cut(s)	376, 2274
BsrDI	GCAATG	2 cut(s)	1019, 1298
BsrI	ACTGG	3 cut(s)	681, 819, 2044
BssNI	GRCGYC	1 cut(s)	342
BssT1I	CCWWGG	3 cut(s)	525, 1300, 2239
Bst2UI	CCWGG	7 cut(s)	380, 761, 791, 1143, 1158, 1602, 2231
Bst4CI	ACNGT	2 cut(s)	1627, 1923
Bst6I	CTCTTC	5 cut(s)	170, 746, 1571, 1908, 2125
BstACI	GRCGYC	1 cut(s)	342
BstAFI	CTTAAG	1 cut(s)	850
BstAPI	GCANNNNNTGC	2 cut(s)	863, 1787
BstBAI	YACGTR	1 cut(s)	1078
BstDEI	CTNAG	6 cut(s)	323, 386, 644, 2001, 2018, 2031
BstDSI	CCRYGG	1 cut(s)	354
BstF5I	GGATG	4 cut(s)	967, 1792, 1893, 1969
BstFNI	CGCG	2 cut(s)	161, 300
BstH2I	RGCGCY	1 cut(s)	440
BstHHI	GCGC	3 cut(s)	163, 363, 439
BstMAI	GTCTC	3 cut(s)	526, 1817, 2087
BstMCI	CGRYCG	1 cut(s)	2224
BstMWI	GCNNNNNNNGC	9 cut(s)	373, 382, 427, 436, 476, 559, 863, 1009, 1787
BstNI	CCWGG	7 cut(s)	380, 761, 791, 1143, 1158, 1602, 2231
BstNSI	RCATGY	4 cut(s)	367, 664, 1706, 2194
BstSCI	CCNGG	8 cut(s)	174, 378, 759, 789, 1141, 1156, 1600, 2229
BstSFI	CTRYAG	1 cut(s)	2298
BstSLI	GKGCMC	2 cut(s)	373, 2125
BstUI	CGCG	2 cut(s)	161, 300
BstV1I	GCAGC	7 cut(s)	850, 1253, 1537, 1555, 1870, 2011, 2047
BstV2I	GAAGAC	2 cut(s)	1482, 1661
BstX2I	RGATCY	5 cut(s)	76, 101, 461, 486, 756
BstYI	RGATCY	5 cut(s)	76, 101, 461, 486, 756
BstZI	CGGCCG	1 cut(s)	2221
BsuRI	GGCC	5 cut(s)	194, 371, 470, 917, 2223
BtgI	CCRYGG	1 cut(s)	354
BtrI	CACGTC	1 cut(s)	517
BtsCI	GGATG	4 cut(s)	967, 1792, 1893, 1969
BtsIMutI	CAGTG	3 cut(s)	688, 2080, 2175
BveI	ACCTGC	2 cut(s)	735, 1807
CaiI	CAGNNNCTG	1 cut(s)	727
CciI	TCATGA	2 cut(s)	1284, 1654
CfoI	GCGC	3 cut(s)	163, 363, 439
Cfr13I	GGNCC	3 cut(s)	369, 370, 916
CsiI	ACCWGGT	1 cut(s)	1141
Csp6I	GTAC	8 cut(s)	1355, 1628, 1706, 1796, 1882, 1984, 2218, 2269
CspCI	CAANNNNNGTGG	2 cut(s)	894, 929
CviQI	GTAC	8 cut(s)	1355, 1628, 1706, 1796, 1882, 1984, 2218, 2269
DdeI	CTNAG	6 cut(s)	323, 386, 644, 2001, 2018, 2031
DraIII	CACNNNGTG	1 cut(s)	2167
EaeI	YGGCCR	1 cut(s)	2221
EagI	CGGCCG	1 cut(s)	2221
Eam1104I	CTCTTC	5 cut(s)	170, 746, 1571, 1908, 2125
EarI	CTCTTC	5 cut(s)	170, 746, 1571, 1908, 2125
EciI	GGCGGA	3 cut(s)	89, 340, 974
Ecl136II	GAGCTC	2 cut(s)	247, 385
EclXI	CGGCCG	1 cut(s)	2221
Eco130I	CCWWGG	3 cut(s)	525, 1300, 2239
Eco147I	AGGCCT	1 cut(s)	194
Eco24I	GRGCYC	4 cut(s)	249, 373, 387, 428
Eco52I	CGGCCG	1 cut(s)	2221
Eco53kI	GAGCTC	2 cut(s)	247, 385
Eco57I	CTGAAG	1 cut(s)	1970
Eco72I	CACGTG	1 cut(s)	1078
EcoICRI	GAGCTC	2 cut(s)	247, 385
EcoO109I	RGGNCCY	1 cut(s)	370
EcoRII	CCWGG	7 cut(s)	378, 759, 789, 1141, 1156, 1600, 2229
EcoT14I	CCWWGG	3 cut(s)	525, 1300, 2239
EcoT22I	ATGCAT	2 cut(s)	1019, 1792
EcoT38I	GRGCYC	4 cut(s)	249, 373, 387, 428
ErhI	CCWWGG	3 cut(s)	525, 1300, 2239
Esp3I	CGTCTC	1 cut(s)	526
FalI	AAGNNNNNCTT	4 cut(s)	1101, 1133, 1426, 1458
FaqI	GGGAC	7 cut(s)	206, 634, 649, 807, 961, 1361, 1929
FauI	CCCGC	4 cut(s)	166, 360, 381, 1330
FauNDI	CATATG	1 cut(s)	859
FbaI	TGATCA	1 cut(s)	1744
FblI	GTMKAC	2 cut(s)	339, 345
Fnu4HI	GCNGC	9 cut(s)	471, 864, 1242, 1362, 1526, 1569, 1859, 2025, 2061
FokI	GGATG	4 cut(s)	974, 1799, 1900, 1976
FriOI	GRGCYC	4 cut(s)	249, 373, 387, 428
Fsp4HI	GCNGC	9 cut(s)	471, 864, 1242, 1362, 1526, 1569, 1859, 2025, 2061
FspAI	RTGCGCAY	1 cut(s)	362
FspI	TGCGCA	1 cut(s)	362
GlaI	GCGC	3 cut(s)	162, 362, 438
GluI	GCNGC	9 cut(s)	471, 864, 1242, 1362, 1526, 1569, 1859, 2025, 2061
GsuI	CTGGAG	4 cut(s)	401, 996, 1398, 2087
HaeII	RGCGCY	1 cut(s)	440
HaeIII	GGCC	5 cut(s)	194, 371, 470, 917, 2223
HapII	CCGG	1 cut(s)	176
HhaI	GCGC	3 cut(s)	163, 363, 439
Hin1I	GRCGYC	1 cut(s)	342
Hin6I	GCGC	3 cut(s)	161, 361, 437
HinP1I	GCGC	3 cut(s)	161, 361, 437
HincII	GTYRAC	3 cut(s)	319, 340, 346
HindII	GTYRAC	3 cut(s)	319, 340, 346
HinfI	GANTC	9 cut(s)	4, 134, 185, 347, 691, 1349, 1409, 1460, 1825
HpaII	CCGG	1 cut(s)	176
HphI	GGTGA	2 cut(s)	1700, 1911
Hpy166II	GTNNAC	4 cut(s)	319, 340, 346, 2123
Hpy8I	GTNNAC	4 cut(s)	319, 340, 346, 2123
Hpy99I	CGWCG	4 cut(s)	341, 344, 347, 521
HpyAV	CCTTC	5 cut(s)	226, 235, 1214, 1404, 1945
HpyCH4III	ACNGT	2 cut(s)	1627, 1923
HpyCH4IV	ACGT	7 cut(s)	342, 509, 516, 1077, 1479, 1880, 1942
HpyF10VI	GCNNNNNNNGC	9 cut(s)	373, 382, 427, 436, 476, 559, 863, 1009, 1787
HpyF3I	CTNAG	6 cut(s)	323, 386, 644, 2001, 2018, 2031
HpySE526I	ACGT	7 cut(s)	342, 509, 516, 1077, 1479, 1880, 1942
Hsp92I	GRCGYC	1 cut(s)	342
HspAI	GCGC	3 cut(s)	161, 361, 437
KpnI	GGTACC	1 cut(s)	1987
Ksp22I	TGATCA	1 cut(s)	1744
LguI	GCTCTTC	1 cut(s)	170
LmnI	GCTCC	9 cut(s)	252, 381, 382, 419, 493, 1598, 1969, 2138, 2299
Lsp1109I	GCAGC	7 cut(s)	850, 1253, 1537, 1555, 1870, 2011, 2047
LweI	GCATC	5 cut(s)	772, 817, 1777, 1987, 2239
MabI	ACCWGGT	1 cut(s)	1141
MaeII	ACGT	7 cut(s)	342, 509, 516, 1077, 1479, 1880, 1942
MaeIII	GTNAC	3 cut(s)	614, 1688, 2225
MbiI	CCGCTC	2 cut(s)	376, 2274
MfeI	CAATTG	2 cut(s)	844, 1663
MflI	RGATCY	5 cut(s)	76, 101, 461, 486, 756
MhlI	GDGCHC	6 cut(s)	249, 373, 387, 428, 1345, 2125
MlyI	GAGTC	4 cut(s)	128, 179, 341, 1819
MmeI	TCCRAC	6 cut(s)	129, 147, 228, 1023, 1448, 2196
Mph1103I	ATGCAT	2 cut(s)	1019, 1792
MseI	TTAA	5 cut(s)	851, 923, 1008, 1427, 2319
MslI	CAYNNNNRTG	2 cut(s)	825, 1817
MspA1I	CMGCKG	1 cut(s)	1244
MspCI	CTTAAG	1 cut(s)	850
MspI	CCGG	1 cut(s)	176
MspR9I	CCNGG	8 cut(s)	176, 380, 761, 791, 1143, 1158, 1602, 2231
MunI	CAATTG	2 cut(s)	844, 1663
Mva1269I	GAATGC	1 cut(s)	1017
MvaI	CCWGG	7 cut(s)	380, 761, 791, 1143, 1158, 1602, 2231
MvnI	CGCG	2 cut(s)	161, 300
MwoI	GCNNNNNNNGC	9 cut(s)	373, 382, 427, 436, 476, 559, 863, 1009, 1787
NciI	CCSGG	1 cut(s)	176
NdeI	CATATG	1 cut(s)	859
NheI	GCTAGC	1 cut(s)	767
NlaIV	GGNNCC	8 cut(s)	78, 371, 372, 415, 758, 918, 1298, 1985
NmeAIII	GCCGAG	1 cut(s)	499
NmuCI	GTSAC	1 cut(s)	1688
NsbI	TGCGCA	1 cut(s)	362
NsiI	ATGCAT	2 cut(s)	1019, 1792
NspI	RCATGY	4 cut(s)	367, 664, 1706, 2194
OliI	CACNNNNGTG	1 cut(s)	1817
PaeI	GCATGC	3 cut(s)	367, 664, 2194
PagI	TCATGA	2 cut(s)	1284, 1654
PceI	AGGCCT	1 cut(s)	194
PciI	ACATGT	1 cut(s)	1702
PciSI	GCTCTTC	1 cut(s)	170
PcsI	WCGNNNNNNNCGW	6 cut(s)	225, 282, 312, 342, 351, 624
PctI	GAATGC	1 cut(s)	1017
PfeI	GAWTC	5 cut(s)	4, 691, 1349, 1409, 1460
PflFI	GACNNNGTC	1 cut(s)	314
PfoI	TCCNGGA	2 cut(s)	378, 1156
PkrI	GCNGC	9 cut(s)	472, 865, 1243, 1363, 1527, 1570, 1860, 2026, 2062
PleI	GAGTC	4 cut(s)	128, 179, 341, 1819
PmaCI	CACGTG	1 cut(s)	1078
PmlI	CACGTG	1 cut(s)	1078
PpsI	GAGTC	4 cut(s)	128, 179, 341, 1819
Ppu21I	YACGTR	1 cut(s)	1078
PscI	ACATGT	1 cut(s)	1702
PshBI	ATTAAT	2 cut(s)	923, 2319
PsiI	TTATAA	2 cut(s)	1188, 1275
Psp124BI	GAGCTC	2 cut(s)	249, 387
Psp6I	CCWGG	7 cut(s)	378, 759, 789, 1141, 1156, 1600, 2229
PspCI	CACGTG	1 cut(s)	1078
PspGI	CCWGG	7 cut(s)	378, 759, 789, 1141, 1156, 1600, 2229
PspN4I	GGNNCC	8 cut(s)	78, 371, 372, 415, 758, 918, 1298, 1985
PspOMI	GGGCCC	1 cut(s)	369
PspPI	GGNCC	3 cut(s)	369, 370, 916
PstI	CTGCAG	1 cut(s)	2302
PstNI	CAGNNNCTG	1 cut(s)	727
PsuI	RGATCY	5 cut(s)	76, 101, 461, 486, 756
PsyI	GACNNNGTC	1 cut(s)	314
PvuII	CAGCTG	1 cut(s)	1244
RsaI	GTAC	8 cut(s)	1356, 1629, 1707, 1797, 1883, 1985, 2219, 2270
RsaNI	GTAC	8 cut(s)	1355, 1628, 1706, 1796, 1882, 1984, 2218, 2269
RseI	CAYNNNNRTG	2 cut(s)	825, 1817
SacI	GAGCTC	2 cut(s)	249, 387
SalI	GTCGAC	2 cut(s)	338, 344
SapI	GCTCTTC	1 cut(s)	170
SaqAI	TTAA	5 cut(s)	851, 923, 1008, 1427, 2319
SatI	GCNGC	9 cut(s)	471, 864, 1242, 1362, 1526, 1569, 1859, 2025, 2061
Sau96I	GGNCC	3 cut(s)	369, 370, 916
SchI	GAGTC	4 cut(s)	128, 179, 341, 1819
ScrFI	CCNGG	8 cut(s)	176, 380, 761, 791, 1143, 1158, 1602, 2231
SduI	GDGCHC	6 cut(s)	249, 373, 387, 428, 1345, 2125
SexAI	ACCWGGT	1 cut(s)	1141
SfaNI	GCATC	5 cut(s)	772, 817, 1777, 1987, 2239
SfcI	CTRYAG	1 cut(s)	2298
SgrDI	CGTCGACG	1 cut(s)	338
SmiMI	CAYNNNNRTG	2 cut(s)	825, 1817
SmlI	CTYRAG	6 cut(s)	698, 850, 986, 1543, 1709, 1852
SmoI	CTYRAG	6 cut(s)	698, 850, 986, 1543, 1709, 1852
SpeI	ACTAGT	1 cut(s)	1367
SphI	GCATGC	3 cut(s)	367, 664, 2194
SseBI	AGGCCT	1 cut(s)	194
SstI	GAGCTC	2 cut(s)	249, 387
StuI	AGGCCT	1 cut(s)	194
StyD4I	CCNGG	8 cut(s)	174, 378, 759, 789, 1141, 1156, 1600, 2229
StyI	CCWWGG	3 cut(s)	525, 1300, 2239
TaaI	ACNGT	2 cut(s)	1627, 1923
TaiI	ACGT	7 cut(s)	345, 512, 519, 1080, 1482, 1883, 1945
TatI	WGTACW	2 cut(s)	1354, 1705
TauI	GCSGC	2 cut(s)	473, 1364
TfiI	GAWTC	5 cut(s)	4, 691, 1349, 1409, 1460
Tru1I	TTAA	5 cut(s)	851, 923, 1008, 1427, 2319
Tru9I	TTAA	5 cut(s)	851, 923, 1008, 1427, 2319
TscAI	CASTG	3 cut(s)	688, 2080, 2182
TseFI	GTSAC	1 cut(s)	1688
TseI	GCWGC	7 cut(s)	863, 1241, 1525, 1568, 1858, 2024, 2060
Tsp45I	GTSAC	1 cut(s)	1688
TspGWI	ACGGA	4 cut(s)	406, 594, 1221, 1785
TspRI	CASTG	3 cut(s)	688, 2080, 2182
Tth111I	GACNNNGTC	1 cut(s)	314
Vha464I	CTTAAG	1 cut(s)	850
VneI	GTGCAC	1 cut(s)	2121
VspI	ATTAAT	2 cut(s)	923, 2319
XapI	RAATTY	8 cut(s)	589, 604, 1034, 1047, 1063, 1172, 1253, 1637
XbaI	TCTAGA	2 cut(s)	1216, 1345
XceI	RCATGY	4 cut(s)	367, 664, 1706, 2194
XmiI	GTMKAC	2 cut(s)	339, 345
ZraI	GACGTC	1 cut(s)	343
Zsp2I	ATGCAT	2 cut(s)	1019, 1792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.