Rorug06G0504500

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0010367
Physical Location & Seq
Forward (+)
62008104 .. 62030014
21911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0504500.1

Sequence Viewer

Length: 7641 bp
ATGGCATTTCGGTTTGACTTGTTGCTGCTTCTGGGTTTGCTCGTTTGTGTGAGCTTTGGTAATGTGGATTCAGATGAAGGAGCAACACTGCTGGAGATAAAGAAGTCGTTTAGGGATGTGGACAATGTTCTATACGACTGGAGAGACTCACCGTCTTTAGACTATTGTGTTTGGAGAGGCGTCACATGTGACAATGTCACCTTCAATGTCATAGCACTCAATCTATCAGGTCTAAATCTTGATGGAGAAATCTCACCTGCAATAGGAAATCTCAAGGGCCTCCAGTCCATTGATTTGAGAGGGAACCGACTTTCAGGCCAGATCCCAGATGAGATTGGTGACTGTTCGTCGCTGAGATACCTGGACCTGTCCTTCAATGAGATATATGGAGACATCCCATTTTCAATATCCAAGTTGAAGCAACTGGAAAGCATAATGTTGAAAAATAATCAGTTGATTGGACCACTCCCTTCAACACTGTCCCAGATTCCGAACCTGAAGATGTTAGACCTAGCCCAGAATAATCTCAGTGGGGAAATACCAAGGCTTATTTACTGGAATGAAGTTCTACAATATCTTGGTTTGCGTGGGAACAATTTAGTTGGGAAACTTTCTCCAGATATGTGCCAGTTAACTGGGTTATGGTATTTTGATGTGCGAAACAACAGTTTGAGTGGTAGTATTCCTCAAAATATAGGGAACTGCACTGCCTTCCAAGTCTTGGACCTGTCCTATAACCAGCTAACTGGAGAGATTCCTTTCAACATTGGGTTCCTGCAAGTAGCCACCTTATCATTGCAGGGTAATCAACTTTCTGGGCCTATCCCTTCCGTTATTGGCCTGATGCAGGCACTCGCTGTATTAGATTTGAGTGGCAACATGCTAAGTGGACCGATTCCTCCTATTCTGGGGAATTTGACTTATACAGAGAAATTGTACTTGCATGCCAACAAGCTTACAGGATCAATTCCCCCAGAGCTCGGACAAATGGCACAGCTTCATTATTTGGTGTTGAATGATAACCATATTACTGGACAAATTCCACCTGAACTTGGGAAGCTTACCAACTTGTTTGACCTAAATGTTGCTAACAACAATCTTCAAGGGCCTATCCCTGATAATATTAGCTCATGTACAAATCTCAACACCCTCAATGTGCATGGGAACAGATTGAATGGAACCATCCCGCCTGCTCTCCAGAGGCTGGAGAGTATGACTTATCTAAATCTGTCCTCCAACAATCTTCGTGGCTCAATACCAATTGAGCTATCTCGGATTGGCAATTTGGATACTTTGGATCTTTCTAATAACAAGTTCAGTGGATCCATACCTTCTTCGCTTGGTGATTTGGAACATCTTCTTAAGCTGAATTTGAGTAGAAATCATATGACAGGATTTATTCCAGCAGAGTTTGGTAATCTAAGGAGTGTTGTGGACATAGATCTTTCAAATAATTGGCTCACAGGAATGATTCCTCAGGAGCTCAGTCAGCTGCAGAATTTGTTCTCACTGAGGCTAGAGCATAACAATATATCAGGGGAAGTGGTGTCTTTGATCAATTGCCTCAGTCTTGCAGTGCTAAATGTGTCTTATAACAACCTGGCAGGAGATATTCCCACATCCAATAACTTCTCAAGGTTTTCACCCGACAGCTTTGTTGGAAATCCTGATCTTTGTGGCTATTGGCTCAATTCTCCGTGTCATGAGTCCCGTCCAACAGAGAGAGTTGCATTATCTAAAGCGGCTATCCTGGGAATTGCTCTTGGTGCCCTTGTGATTCTTCTCATGATCCTTATTGCCGCCTGCCGCCCTTACCATCCAACTCCTTTTCTTGACGGTACACTTGACAAACCAGCAGTCAATTACTCAACACCAAAACTAGTGATTCTTAACATGAATATGGCACTTCATGTGTATGAGGATATCATGAGGATGACTGAAAACTTGAGTGAGAAGTATATAATTGGTTATGGCGCATCAAGCACGGTATACAAATGTGTTCTTAAGAATTGTAAGCCAGTGGCGATCAAGAGACTCTACTCTCATTATCCACAGTGCTTGAAGGAATTTGAGACAGAACTTGGAACAGTTGGCAGCATCAAGCATCGAAATCTAGTCAGCCTCCAAGGATACTCCTTGTCATCTTCTGGAAACCTTCTCTTTTATGATTACATGGAAAATGGCAGTCTCTGGGATCTCCTTCATGGCCCAACTACCAAGAAGAAGAAGCTTGACTGGGAAGCTCGTATCCAGATAGCACTCGGAGCAGCCCAAGGGCTTGCCTATCTCCATCATGATTGTAGTCCACGTATCATACACAGGGATGTAAAGTCGTCTAACATTCTGTTGGACAAGGATTTTGAGGCTCATTTAACTGATTTTGGTATTGCCAAGAGCTTATGCACGTCAAAGACCCATACATCTACTTGCGTAATGGGCACCATTGGCTACATAGACCCTGAGTATGCTCGAACTTCCCGCCTCACTGAGAAGTCGGACGTTTATAGTTATGGGATTGTCCTGCTGGAGTTGCTAACAGGAAGGAAGGCTGTAGACAATGAATGCAATCTCCATCAATTGATCTTATCAAAGACAGCGAACAATGCTGTGATGGAAACTGTTGATCCAGAGATCACGGCCACATGCATGGACCTTGGAGCAGTGAAGAAGGTTTTTCAGCTTGCACTCCTATGCACAAAGAGGCAGCCAACAGACCGGCCAACTATGCATGAAATAACACGAGTTTTGGGTAGCCTTGTGCCATCACCTACACTGCCGAAACAAGCAACCCTCAATCCTCCATCCACTACACTCTCATCTGTCAAAGCGCCGTGCTACATGGATGAGTATGCAAACCTCAAAACCCCACACATGCTCAATTGCCCATCTATGAGTACCTCAGACGCTCAGCTCTTTCTCAAGTTTGGAGAGGGCGGGAACCCAAAATTTTTCACCCAAAACCTCATTTCCCTTCTCTCTCCTTTCTTTTTGTTTGTTTGGCCCTCGATTTTTGGCTTCTTCAACCTCCAGACCTCTAGGGTTTTCTGGTTCGGCCCTCTCCGGGAGTCCGCAATGAGTCTCCGGAAGGGCGCCAAGGTCTGGCTCGAGGACCGCGATTCGGCGTGGGTGCCGGCCGAGGTCGCCGACTTCAAAGGCAAGCAAGTCCAGCTCGTCGCCGCCTCCGGGAAGAAGGTTTTGGCTTCGCCGGAGAAGCTGTTTCCGAGGGACGCCGACGAGGACGAGCATGGGGGAGTGGATGACATGACCAAATTGACGTATTTGAACGAGCCGGGAGTGCTTTACAATCTTCGGAGGAGATATGCTCTCAATGATATATATACATATACAGGGAGCATTTTGATTGCAGTTAATCCATTCACTAAGCTTCCCCATCTATACAATGTACATATGATGGAGCAATATAGGGGAGCTCCTTTTGGCGAGCTTAGTCCCCATGTTTTTGCTGTGGCTGATGCGTCTTATAGAGCAATGACGACTGAGGGTCGAAGCCAATCAATACTCGTCAGTGGTGAAAGTGGAGCTGGGAAAACAGAGACGACAAAACTGATTATGCAGTATCTTACTTATGTAGGAGGCCGAGCTGCTAGTGATGAGAGAACTGTTGAGCAACAAGTTCTTGAATCAAATCCCCTGCTGGAGGCTTTTGGGAATGCGAGGACTGTTAGAAATGACAATTCAAGTCGTTTTGGCAAGTTTGTTGAGATTCAGTTCGATGCAAACGGGAGAATATCTGGAGCTGCAATTAGAACTTACCTGTTGGAAAGATCCCGTGTTGTGCAGATAACAGACCCTGAAAGGAATTACCACTGTTTTTACCAATTGTGCGCATCTGGAAAGGATGCAGAAAAGTACAAGTTAGGCCATCCAAGCCACTTTCACTACCTGAATCAAAGCAAGACGTATGAACTGGATGGAGTGAGCAATGCGGAAGAATATATGAAGACAAGAACAGCAATGGATATTGTTGGCATCAGCCACGAAGAGCAGGAAGCAATATTTCGCACCTTGGCTGCAATTCTACATTTGGGAAATGTTGAATTTTCTCCTGGAAAAGAGCACGACTCTTCAGTTCTAAAGGATCAGAAATCCAGCTTTCATATGCAGATGGCTGCTAATCTTTTTATGTGTGATGAAAACCTCTTGTTAGCAACATTATCTACTCGTACAATCCAAACTCGTGAAGGAATTATTATTAAAGCTCTCGACTGCAATGGTGCTGTTTCTAGTAGAGATGCATTGGCAAAGACTGTTTATGCACGATTGTTTGACTGGCTTGTCGAGAAGATTAACAGGTCTGTTGGGCAAGACTTGAATTCCCAAATGCAGATAGGAGTATTGGACATTTATGGTTTTGAATGCTTTAAAGACAACAGTTTTGAGCAATTTTGCATTAATTTTGCAAATGAGAAGCTGCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATAGCAAAGAGGAAATCGATTGGAGCTACATTGAATTCATAGACAACCAAGATGTTCTAGATTTGATTGAGAAGAAACCTCTTGGGATAATTGCTCTGTTGGATGAAGCTTGCATGTTCCCGAAATCAACACACCACACATTTTCAACCAGGTTGTTTCAGAGTTTCCGGGACCACCCAAGGTGGGAGAAGGCAAAATTTTCGGAGACGGATTTTACCTTGTCCCATTATGCTGGAAAGGTCACTTATCACACAGATTTCTTTTTGGATAAAAACCGTGATTATGTGGTGGTAGATCATTGCAATCTTTTGTCTTCCTCGAAATGCCCCTTTGTTGCTGATCTTTTCTGCTCACTACCTGAAGAATCTTCAAGATCATCGTACAAGTTTTCTTCTGTAGCCACTAGATTTAAGCAACAACTTCAAGCATTGATGGAAACCCTCAATACAACAGAGCCTCATTATGTACGCTGTGTTAAGCCAAACTCATTGAATCGACCGCAGAAATTTGAGAATCTGAGCATCTTACATCAATTACGTTGTGGGGGTGTTTTAGAGGCTGTTCGGATAAGTCTGGCAGGTTATCCCACACGTAGAACTTACTCAGAGTTTGTAGATCGTTTTGGATTATTAGCTCCTGAATTAATGGACATAAGCTATGATGAAAAATCTACAACTGAGAAAATTCTGAAGAATTTGAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTGTTTCTTAGGGCTGGTCAAATTGGTGTTTTGGACTCCAGACGCGCTGAGGTCTTGGACAATGCTGCAAAGCGTATTCAATGTCAGTTGCGAACATTCGTTGCTCGCAGGAATTTTGTTTCAACTCGAGCTGCTGCATTAGCACTTCAAGCTTTTTGTAGAGGATTCCTTGCTAGAGCACTTTATGCTTTAAAACGAGAGACAGCTGCTGCTATTTTCATACAGAAACATGTCCGAAGGTGGCTATTGAGGCATGTGTATGTTGAATTATATTCAGCTGCTGTTACCATACAGTCCAATATTCGTGGTTTTTCAACCCGCCAAAGATTTGTGCATGGAAAAAAACATAAAGCTGCAACTATGATACAGGCTCGGTGGAGGATGCGCAAGGTTCGCTCAGCTTTCCAACATCATCAAGCTTCTATTGTAGCAATACAATGTCTTTGGAGGCAGAAGTTGGCTAAGAGAGAGCTTCGAAAGCTTAAACAACTGGCAAATGAAAGTGGTGCCTTACGTTTAGCTAAGACTAAACTTGAGAAGCAATTGGAAGATCTCACCTGGCGATTGCATCTTGAGAAAAGAATGCGGGTTTCTAATGAAGAAGCTAAGTCAGCAGAAATTTTAAGGCTTCAGACAGTGGTGGAATCTTTGAACCTTGAGTTAGAGGCATCAAACCTGGCAACAATTAATGAGTGCAACAAGAATGCAGTGCTACAGAATCAATTGGAACTGTCAGGGAAAGAAAAATTTGCTTTGGAAAGAGAACTCGAGGATATGGCTGAATTAAGAAAGGAAAATGCAGTTTTAAAAAGTTCTTTGGATGCTTTGGATAAGAAGAATTCTGATATGGAGAATGAGCTTCGCAAGGCTCAGAAAAACAGTAATGACACCATTCAAAAGCTGCAGGAATTTGAACACAAGTGTTATGATCTCCAACAGAATGTAAACAGTCTTAAGGAGAAACTCTTGGTTTTAGAGGATGAGAATCACATCATGCGACAAAAAGCCCTTGCTGTGTCTCCAAAGAGCAATCGACGTGGTTATGAAAAGGCATCAGTTCCCGAGAAGAACTCTGGTGCACTTGTTCCCCACACTGATCGAAAGCCTGAATTTGAGTCACCCACACCTTCAAAACTTATAACACCCTTTTCACATGGCTTGTCCGAATCACGGCGAACAAAGTTAGCAGTGGAGAGGCACCAGGAGAACTATGAATTCCTATCAAGGTGTATTAAAGAGGATATTGGGTTTAAAGACAGTAAACCATCGGCGGCTTGTATCATATACAAATGCCTTCTTCAGTGGCATGCTTTTGAGTCTGAGCGGACAGTTATTTTTGATCATATAATTGAGGGGATAAATGATGTTCTGAGGGTTGGGGATGAGAACATTACCTTGCCATATTGGCTATCCAATGCCTCAGCACTTCTATGTCTATTGCAGAGGAATTTAAGACCAAATGGTTTCCCAGCAACTCAGCGTTCAGCTGGGTCTTCCAGTTTAGCTCTTAGGATTGCGCATGGACTGACGTCACCATTTAAACAAGGAGATGGTATGTCACATTTAGAAGCAAGATATCCAGCTATACTGTTCAAACAACAGCTTACTGCTTGCGTAGAAAAGATATTTGGCTTGATGCGTGACAGTTTGAAGAAGGAGTTGGCTCCACTATTGGGATCATGCATTCAGGCACCCAAAGCTGCACGAGTTCATGCGGGGAAGTCTAGATCACCTGGTAATGCTCCTCAACAATTGCCTGGGAGTCAGTGGGACAACATAATCAAGTTTCTGGATAACCTTATGATTCGATTACGTGGAAATCATGTACCTTCATTTTTCATTCGTAAGCTAATTACACAGGTCTTTTCGTTCATCAATATGTCACTTTTCAACAGTCTGCTTCTGCGACGTGAGTGTTGCACATTTTCGAATGGAGAATATGTAAAATCAGGTCTAGCTGAACTGGAGAAGTGGATTGTCAACACAGGGGATGAGTTTGCAGGAACCTCCTGGCACGAGCTAAATTATATTAGGCAAGCTGTTGGTTTTCTGGTGATTCATCAGAAGAGGAGAAAATCTCTGGATGAGATTAGGCAGGACCTTTGTCCGGCATTGACAATTAGGCAAATCTATCGAATTAGTACCATGTACTGGGATGACAAATATGGCACACAGAGTGTGTCCAATGAGGTGGTTGCCCAAATGAGGGAGCTTTTGAACAAGGACAACCAGAATCTAACCTCCAATTCATTCCTATTGGATGATGATCTAAGCATTCCATTCTCTACGGAAGATATTGACAAGGCAATCCCTCTTATTGATCCTTCAGATATCGAAATTCCATCTTCCTTGTCTGGTTATTCTTGTGTTCAGTTTCTTGTCCAGCACCAAAATGAAATAGTCCGTTCATCCCAAGTAGTTGCTGCATAA

Protein Analysis

2546

Amino Acids

286.64

Weight (kDa)

7.79

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 24 - 64 2e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 379 - 439 4.6e-07 Leucine rich repeat
LRR_8 PF13855 428 - 485 7.7e-08 Leucine rich repeat
LRR_8 PF13855 452 - 511 3.1e-07 Leucine rich repeat
Pkinase PF00069 652 - 913 1.3e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 654 - 915 3.4e-40 Protein tyrosine and serine/threonine kinase
Myosin_head PF00063 1085 - 1741 1.2e-252 Myosin head (motor domain)
DIL PF01843 2354 - 2457 2.1e-27 DIL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1593, 6350
AarI CACCTGC 1 cut(s) 265
AasI GACNNNNNNGTC 1 cut(s) 4295
AatII GACGTC 1 cut(s) 6743
Acc16I TGCGCA 3 cut(s) 3847, 5597, 6729
Acc36I ACCTGC 2 cut(s) 265, 5048
AccB1I GGYRCC 7 cut(s) 1766, 2438, 3089, 3127, 5717, 6408, 6901
AccB7I CCANNNNNTGG 4 cut(s) 721, 1204, 3099, 7362
AccBSI CCGCTC 1 cut(s) 6535
AccI GTMKAC 2 cut(s) 1989, 2553
AccII CGCG 2 cut(s) 3114, 5256
AccIII TCCGGA 1 cut(s) 3081
AcoI YGGCCR 3 cut(s) 2637, 2717, 3132
AcuI CTGAAG 7 cut(s) 518, 4071, 4860, 5189, 5825, 6494, 7521
AcyI GRCGYC 4 cut(s) 180, 3090, 3228, 6740
AdeI CACNNNGTG 1 cut(s) 7388
AflII CTTAAG 3 cut(s) 1361, 2003, 6164
AflIII ACRYGT 3 cut(s) 185, 5069, 5440
AhdI GACNNNNNGTC 3 cut(s) 151, 346, 3501
AhlI ACTAGT 1 cut(s) 1879
AjiI CACGTC 3 cut(s) 2406, 6248, 7121
AjuI GAANNNNNNNTTGG 8 cut(s) 3179, 3211, 5180, 5212, 6822, 6854, 6854, 6886
Alw21I GWGCWC 6 cut(s) 981, 1485, 3433, 4080, 5392, 6292
Alw44I GTGCAC 1 cut(s) 6288
AlwNI CAGNNNCTG 5 cut(s) 1204, 2190, 3812, 5420, 5492
Ama87I CYCGRG 4 cut(s) 3104, 5337, 5978, 6272
Aor13HI TCCGGA 1 cut(s) 3081
ApaLI GTGCAC 1 cut(s) 6288
ArsI GACNNNNNNTTYG 6 cut(s) 1842, 1874, 2342, 2374, 4379, 4411
AseI ATTAAT 3 cut(s) 4413, 5123, 5898
Asp700I GAANNNNTTC 2 cut(s) 1356, 1502
AspLEI GCGC 7 cut(s) 1976, 2830, 3092, 3848, 5258, 5598, 6730
AsuC2I CCSGG 4 cut(s) 3062, 3184, 3291, 4649
AsuII TTCGAA 2 cut(s) 5686, 7139
AvaI CYCGRG 4 cut(s) 3104, 5337, 5978, 6272
AvaII GGWCC 9 cut(s) 364, 461, 724, 890, 2650, 3109, 4651, 5205, 7309
AxyI CCTNAGG 1 cut(s) 1476
BaeGI GKGCMC 3 cut(s) 1771, 2441, 6292
BamHI GGATCC 1 cut(s) 1322
BanI GGYRCC 7 cut(s) 1766, 2438, 3089, 3127, 5717, 6408, 6901
BanII GRGCYC 3 cut(s) 981, 1485, 3433
BauI CACGAG 4 cut(s) 2739, 4197, 6915, 7226
BbsI GAAGAC 3 cut(s) 3968, 4785, 6696
Bbv12I GWGCWC 6 cut(s) 981, 1485, 3433, 4080, 5392, 6292
BbvCI CCTCAGC 2 cut(s) 5259, 6631
BceAI ACGGC 3 cut(s) 2652, 2815, 6398
BcgI CGANNNNNNTGC 4 cut(s) 4662, 4696, 7325, 7359
BciVI GTATCC 3 cut(s) 1282, 2123, 2258
BclI TGATCA 2 cut(s) 1554, 6550
BcnI CCSGG 4 cut(s) 3062, 3184, 3291, 4649
BcuI ACTAGT 1 cut(s) 1879
BfmI CTRYAG 6 cut(s) 1493, 2550, 4433, 4875, 5924, 6113
BfoI RGCGCY 2 cut(s) 2831, 3093
BfrI CTTAAG 3 cut(s) 1361, 2003, 6164
BfuAI ACCTGC 2 cut(s) 265, 5048
BfuI GTATCC 3 cut(s) 1282, 2123, 2258
BglI GCCNNNNNGGC 1 cut(s) 6616
BglII AGATCT 2 cut(s) 1441, 5761
BlpI GCTNAGC 2 cut(s) 2907, 5608
Bme18I GGWCC 9 cut(s) 364, 461, 724, 890, 2650, 3109, 4651, 5205, 7309
BmeRI GACNNNNNGTC 3 cut(s) 151, 346, 3501
BmeT110I CYCGRG 4 cut(s) 3104, 5337, 5978, 6272
BmgBI CACGTC 3 cut(s) 2406, 6248, 7121
BmrI ACTGGG 3 cut(s) 645, 2245, 7372
BmuI ACTGGG 3 cut(s) 645, 2245, 7372
BoxI GACNNNNGTC 2 cut(s) 6739, 7314
BpiI GAAGAC 3 cut(s) 3968, 4785, 6696
BplI GAGNNNNNCTC 8 cut(s) 3307, 3339, 4067, 4099, 6266, 6298, 7273, 7305
Bpu10I CCTNAGC 2 cut(s) 5259, 6631
Bpu1102I GCTNAGC 2 cut(s) 2907, 5608
Bpu14I TTCGAA 2 cut(s) 5686, 7139
BpuEI CTTGAG 8 cut(s) 257, 1618, 1966, 2903, 5204, 5765, 5804, 5888
BpuMI CCSGG 4 cut(s) 3062, 3184, 3291, 4649
Bsa29I ATCGAT 1 cut(s) 4497
BsaAI YACGTR 3 cut(s) 2309, 5072, 7025
BsaBI GATNNNNATC 2 cut(s) 6195, 7476
BsaHI GRCGYC 4 cut(s) 180, 3090, 3228, 6740
BsaWI WCCGGW 1 cut(s) 3081
BsaXI ACNNNNNCTCC 4 cut(s) 3200, 3230, 7137, 7167
Bse118I RCCGGY 2 cut(s) 2715, 3130
Bse21I CCTNAGG 1 cut(s) 1476
Bse3DI GCAATG 7 cut(s) 794, 3078, 3495, 3949, 3981, 4237, 4777
Bse8I GATNNNNATC 2 cut(s) 6195, 7476
BseAI TCCGGA 1 cut(s) 3081
BseCI ATCGAT 1 cut(s) 4497
BseJI GATNNNNATC 2 cut(s) 6195, 7476
BseMI GCAATG 7 cut(s) 794, 3078, 3495, 3949, 3981, 4237, 4777
BseRI GAGGAG 4 cut(s) 3328, 4490, 6945, 7294
BseSI GKGCMC 3 cut(s) 1771, 2441, 6292
BseX3I CGGCCG 1 cut(s) 3132
BseYI CCCAGC 3 cut(s) 3542, 6679, 6698
BsgI GTGCAG 3 cut(s) 688, 3818, 6897
Bsh1236I CGCG 2 cut(s) 3114, 5256
Bsh1285I CGRYCG 2 cut(s) 3135, 4979
BshNI GGYRCC 7 cut(s) 1766, 2438, 3089, 3127, 5717, 6408, 6901
BshVI ATCGAT 1 cut(s) 4497
BsiEI CGRYCG 2 cut(s) 3135, 4979
BsiHKAI GWGCWC 6 cut(s) 981, 1485, 3433, 4080, 5392, 6292
BsiHKCI CYCGRG 4 cut(s) 3104, 5337, 5978, 6272
BsiSI CCGG 9 cut(s) 2716, 3061, 3082, 3131, 3183, 3206, 3290, 4648, 7319
BslFI GGGAC 7 cut(s) 466, 1693, 3239, 3435, 4664, 4687, 6995
BsmBI CGTCTC 2 cut(s) 3548, 4679
BsmFI GGGAC 7 cut(s) 466, 1693, 3239, 3435, 4664, 4687, 6995
BsmI GAATGC 7 cut(s) 2567, 3676, 4382, 5799, 5920, 6894, 7485
BsoBI CYCGRG 4 cut(s) 3104, 5337, 5978, 6272
Bsp119I TTCGAA 2 cut(s) 5686, 7139
Bsp1286I GDGCHC 8 cut(s) 981, 1485, 1771, 2441, 3433, 4080, 5392, 6292
Bsp13I TCCGGA 1 cut(s) 3081
Bsp1407I TGTACA 2 cut(s) 1133, 3403
Bsp1720I GCTNAGC 2 cut(s) 2907, 5608
BspDI ATCGAT 1 cut(s) 4497
BspEI TCCGGA 1 cut(s) 3081
BspFNI CGCG 2 cut(s) 3114, 5256
BspHI TCATGA 4 cut(s) 1702, 1785, 1926, 2293
BspMAI CTGCAG 3 cut(s) 1497, 4437, 6117
BspMI ACCTGC 2 cut(s) 265, 5048
BspQI GCTCTTC 1 cut(s) 3996
BspT104I TTCGAA 2 cut(s) 5686, 7139
BspT107I GGYRCC 7 cut(s) 1766, 2438, 3089, 3127, 5717, 6408, 6901
BspTI CTTAAG 3 cut(s) 1361, 2003, 6164
BsrBI CCGCTC 1 cut(s) 6535
BsrDI GCAATG 7 cut(s) 794, 3078, 3495, 3949, 3981, 4237, 4777
BsrFI RCCGGY 2 cut(s) 2715, 3130
BsrGI TGTACA 2 cut(s) 1133, 3403
BssAI RCCGGY 2 cut(s) 2715, 3130
BssNAI GTATAC 1 cut(s) 1990
BssNI GRCGYC 4 cut(s) 180, 3090, 3228, 6740
BssSI CACGAG 4 cut(s) 2739, 4197, 6915, 7226
BssT1I CCWWGG 7 cut(s) 542, 2125, 2272, 2653, 3093, 4026, 4658
Bst1107I GTATAC 1 cut(s) 1990
Bst2BI CACGAG 4 cut(s) 2739, 4197, 6915, 7226
Bst6I CTCTTC 3 cut(s) 3996, 4090, 7271
BstACI GRCGYC 4 cut(s) 180, 3090, 3228, 6740
BstAFI CTTAAG 3 cut(s) 1361, 2003, 6164
BstAPI GCANNNNNTGC 1 cut(s) 5396
BstAUI TGTACA 2 cut(s) 1133, 3403
BstBAI YACGTR 3 cut(s) 2309, 5072, 7025
BstBI TTCGAA 2 cut(s) 5686, 7139
BstENI CCTNNNNNAGG 3 cut(s) 261, 845, 3656
BstFNI CGCG 2 cut(s) 3114, 5256
BstH2I RGCGCY 2 cut(s) 2831, 3093
BstHHI GCGC 7 cut(s) 1976, 2830, 3092, 3848, 5258, 5598, 6730
BstMCI CGRYCG 2 cut(s) 3135, 4979
BstPAI GACNNNNGTC 2 cut(s) 6739, 7314
BstSFI CTRYAG 6 cut(s) 1493, 2550, 4433, 4875, 5924, 6113
BstSLI GKGCMC 3 cut(s) 1771, 2441, 6292
BstUI CGCG 2 cut(s) 3114, 5256
BstV2I GAAGAC 3 cut(s) 3968, 4785, 6696
BstX2I RGATCY 7 cut(s) 321, 1297, 1322, 1441, 2194, 3785, 5761
BstXI CCANNNNNNTGG 6 cut(s) 635, 746, 1031, 2647, 4712, 7402
BstYI RGATCY 7 cut(s) 321, 1297, 1322, 1441, 2194, 3785, 5761
BstZ17I GTATAC 1 cut(s) 1990
BstZI CGGCCG 1 cut(s) 3132
Bsu15I ATCGAT 1 cut(s) 4497
Bsu36I CCTNAGG 1 cut(s) 1476
BsuI GTATCC 3 cut(s) 1282, 2123, 2258
BsuTUI ATCGAT 1 cut(s) 4497
BtrI CACGTC 3 cut(s) 2406, 6248, 7121
BtsI GCAGTG 7 cut(s) 86, 705, 1581, 2667, 2771, 5925, 6405
BveI ACCTGC 2 cut(s) 265, 5048
CaiI CAGNNNCTG 5 cut(s) 1204, 2190, 3812, 5420, 5492
CciI TCATGA 4 cut(s) 1702, 1785, 1926, 2293
CfoI GCGC 7 cut(s) 1976, 2830, 3092, 3848, 5258, 5598, 6730
Cfr10I RCCGGY 2 cut(s) 2715, 3130
ClaI ATCGAT 1 cut(s) 4497
CseI GACGC 5 cut(s) 169, 2912, 3236, 3465, 5262
CsiI ACCWGGT 2 cut(s) 4628, 6943
DinI GGCGCC 1 cut(s) 3091
DraI TTTAAA 5 cut(s) 4384, 5403, 6018, 6463, 6751
DraIII CACNNNGTG 1 cut(s) 7388
DrdI GACNNNNNNGTC 1 cut(s) 4295
DriI GACNNNNNGTC 3 cut(s) 151, 346, 3501
DseDI GACNNNNNNGTC 1 cut(s) 4295
EaeI YGGCCR 3 cut(s) 2637, 2717, 3132
EagI CGGCCG 1 cut(s) 3132
Eam1104I CTCTTC 3 cut(s) 3996, 4090, 7271
Eam1105I GACNNNNNGTC 3 cut(s) 151, 346, 3501
EarI CTCTTC 3 cut(s) 3996, 4090, 7271
Ecl136II GAGCTC 3 cut(s) 979, 1483, 3431
EclXI CGGCCG 1 cut(s) 3132
Eco130I CCWWGG 7 cut(s) 542, 2125, 2272, 2653, 3093, 4026, 4658
Eco24I GRGCYC 3 cut(s) 981, 1485, 3433
Eco32I GATATC 3 cut(s) 1924, 6788, 7543
Eco47I GGWCC 9 cut(s) 364, 461, 724, 890, 2650, 3109, 4651, 5205, 7309
Eco52I CGGCCG 1 cut(s) 3132
Eco53kI GAGCTC 3 cut(s) 979, 1483, 3431
Eco57I CTGAAG 7 cut(s) 518, 4071, 4860, 5189, 5825, 6494, 7521
Eco81I CCTNAGG 1 cut(s) 1476
Eco88I CYCGRG 4 cut(s) 3104, 5337, 5978, 6272
EcoICRI GAGCTC 3 cut(s) 979, 1483, 3431
EcoNI CCTNNNNNAGG 3 cut(s) 261, 845, 3656
EcoO109I RGGNCCY 3 cut(s) 277, 1106, 7309
EcoRI GAATTC 4 cut(s) 4333, 4514, 6049, 6425
EcoRV GATATC 3 cut(s) 1924, 6788, 7543
EcoT14I CCWWGG 7 cut(s) 542, 2125, 2272, 2653, 3093, 4026, 4658
EcoT22I ATGCAT 4 cut(s) 2648, 2730, 4258, 6896
EcoT38I GRGCYC 3 cut(s) 981, 1485, 3433
EgeI GGCGCC 1 cut(s) 3091
EheI GGCGCC 1 cut(s) 3091
ErhI CCWWGG 7 cut(s) 542, 2125, 2272, 2653, 3093, 4026, 4658
Esp3I CGTCTC 2 cut(s) 3548, 4679
FalI AAGNNNNNCTT 2 cut(s) 5202, 5234
FaqI GGGAC 7 cut(s) 466, 1693, 3239, 3435, 4664, 4687, 6995
FauI CCCGC 6 cut(s) 1194, 2486, 2927, 5537, 5790, 6919
FauNDI CATATG 3 cut(s) 1386, 3408, 4119
FbaI TGATCA 2 cut(s) 1554, 6550
FblI GTMKAC 2 cut(s) 1989, 2553
FriOI GRGCYC 3 cut(s) 981, 1485, 3433
FspAI RTGCGCAY 1 cut(s) 3847
FspI TGCGCA 3 cut(s) 3847, 5597, 6729
GlaI GCGC 7 cut(s) 1975, 2829, 3091, 3847, 5257, 5597, 6729
GsaI CCCAGC 3 cut(s) 3546, 6683, 6702
HaeII RGCGCY 2 cut(s) 2831, 3093
HapII CCGG 9 cut(s) 2716, 3061, 3082, 3131, 3183, 3206, 3290, 4648, 7319
HgaI GACGC 5 cut(s) 169, 2912, 3236, 3465, 5262
HhaI GCGC 7 cut(s) 1976, 2830, 3092, 3848, 5258, 5598, 6730
Hin1I GRCGYC 4 cut(s) 180, 3090, 3228, 6740
Hin6I GCGC 7 cut(s) 1974, 2828, 3090, 3846, 5256, 5596, 6728
HinP1I GCGC 7 cut(s) 1974, 2828, 3090, 3846, 5256, 5596, 6728
HincII GTYRAC 2 cut(s) 633, 7192
HindII GTYRAC 2 cut(s) 633, 7192
HindIII AAGCTT 9 cut(s) 953, 1058, 2228, 3383, 4587, 5180, 5361, 5628, 5690
HpaI GTTAAC 1 cut(s) 633
HpaII CCGG 9 cut(s) 2716, 3061, 3082, 3131, 3183, 3206, 3290, 4648, 7319
Hpy99I CGWCG 5 cut(s) 352, 3176, 3236, 6249, 7122
Hsp92I GRCGYC 4 cut(s) 180, 3090, 3228, 6740
HspAI GCGC 7 cut(s) 1974, 2828, 3090, 3846, 5256, 5596, 6728
KasI GGCGCC 1 cut(s) 3089
Kpn2I TCCGGA 1 cut(s) 3081
KroI GCCGGC 1 cut(s) 3130
KroNI GCCGGC 1 cut(s) 3132
Ksp22I TGATCA 2 cut(s) 1554, 6550
KspAI GTTAAC 1 cut(s) 633
LguI GCTCTTC 1 cut(s) 3996
MabI ACCWGGT 2 cut(s) 4628, 6943
MbiI CCGCTC 1 cut(s) 6535
MfeI CAATTG 8 cut(s) 1260, 1558, 2576, 2878, 3839, 5753, 5933, 6962
MflI RGATCY 7 cut(s) 321, 1297, 1322, 1441, 2194, 3785, 5761
MhlI GDGCHC 8 cut(s) 981, 1485, 1771, 2441, 3433, 4080, 5392, 6292
Mly113I GGCGCC 1 cut(s) 3090
Mph1103I ATGCAT 4 cut(s) 2648, 2730, 4258, 6896
MroI TCCGGA 1 cut(s) 3081
MroNI GCCGGC 1 cut(s) 3130
MroXI GAANNNNTTC 2 cut(s) 1356, 1502
MspA1I CMGCKG 4 cut(s) 1492, 5417, 5489, 6698
MspCI CTTAAG 3 cut(s) 1361, 2003, 6164
MspI CCGG 9 cut(s) 2716, 3061, 3082, 3131, 3183, 3206, 3290, 4648, 7319
MunI CAATTG 8 cut(s) 1260, 1558, 2576, 2878, 3839, 5753, 5933, 6962
Mva1269I GAATGC 7 cut(s) 2567, 3676, 4382, 5799, 5920, 6894, 7485
MvnI CGCG 2 cut(s) 3114, 5256
NaeI GCCGGC 1 cut(s) 3132
NarI GGCGCC 1 cut(s) 3090
NciI CCSGG 4 cut(s) 3062, 3184, 3291, 4649
NdeI CATATG 3 cut(s) 1386, 3408, 4119
NgoMIV GCCGGC 1 cut(s) 3130
NmeAIII GCCGAG 2 cut(s) 3160, 3623
NsbI TGCGCA 3 cut(s) 3847, 5597, 6729
NsiI ATGCAT 4 cut(s) 2648, 2730, 4258, 6896
NspV TTCGAA 2 cut(s) 5686, 7139
PaeI GCATGC 2 cut(s) 947, 6521
PaeR7I CTCGAG 3 cut(s) 3104, 5337, 5978
PagI TCATGA 4 cut(s) 1702, 1785, 1926, 2293
PaqCI CACCTGC 1 cut(s) 265
PciI ACATGT 2 cut(s) 185, 5440
PciSI GCTCTTC 1 cut(s) 3996
PcsI WCGNNNNNNNCGW 1 cut(s) 3111
PctI GAATGC 7 cut(s) 2567, 3676, 4382, 5799, 5920, 6894, 7485
PdiI GCCGGC 1 cut(s) 3132
PdmI GAANNNNTTC 2 cut(s) 1356, 1502
PflFI GACNNNGTC 1 cut(s) 194
PflMI CCANNNNNTGG 4 cut(s) 721, 1204, 3099, 7362
PfoI TCCNGGA 4 cut(s) 3060, 3182, 4066, 4647
PluTI GGCGCC 1 cut(s) 3093
Ppu21I YACGTR 3 cut(s) 2309, 5072, 7025
PpuMI RGGWCCY 1 cut(s) 7309
PscI ACATGT 2 cut(s) 185, 5440
PshAI GACNNNNGTC 2 cut(s) 6739, 7314
PshBI ATTAAT 3 cut(s) 4413, 5123, 5898
PsiI TTATAA 2 cut(s) 1593, 6350
Psp124BI GAGCTC 3 cut(s) 981, 1485, 3433
Psp5II RGGWCCY 1 cut(s) 7309
PspFI CCCAGC 3 cut(s) 3542, 6679, 6698
PspPPI RGGWCCY 1 cut(s) 7309
PspXI VCTCGAGB 3 cut(s) 3104, 5337, 5978
PstI CTGCAG 3 cut(s) 1497, 4437, 6117
PstNI CAGNNNCTG 5 cut(s) 1204, 2190, 3812, 5420, 5492
PsuI RGATCY 7 cut(s) 321, 1297, 1322, 1441, 2194, 3785, 5761
PsyI GACNNNGTC 1 cut(s) 194
PvuII CAGCTG 4 cut(s) 1492, 5417, 5489, 6698
SacI GAGCTC 3 cut(s) 981, 1485, 3433
SapI GCTCTTC 1 cut(s) 3996
SduI GDGCHC 8 cut(s) 981, 1485, 1771, 2441, 3433, 4080, 5392, 6292
SexAI ACCWGGT 2 cut(s) 4628, 6943
SfcI CTRYAG 6 cut(s) 1493, 2550, 4433, 4875, 5924, 6113
SfoI GGCGCC 1 cut(s) 3091
Sfr274I CTCGAG 3 cut(s) 3104, 5337, 5978
SfuI TTCGAA 2 cut(s) 5686, 7139
SinI GGWCC 9 cut(s) 364, 461, 724, 890, 2650, 3109, 4651, 5205, 7309
SlaI CTCGAG 3 cut(s) 3104, 5337, 5978
SpeI ACTAGT 1 cut(s) 1879
SphI GCATGC 2 cut(s) 947, 6521
SspDI GGCGCC 1 cut(s) 3089
SspI AATATT 3 cut(s) 1123, 4017, 5512
SstI GAGCTC 3 cut(s) 981, 1485, 3433
StyI CCWWGG 7 cut(s) 542, 2125, 2272, 2653, 3093, 4026, 4658
TaqII GACCGA 1 cut(s) 907
TatI WGTACW 5 cut(s) 936, 1133, 3403, 3870, 7359
TauI GCSGC 5 cut(s) 1745, 1802, 1809, 3179, 6485
TspGWI ACGGA 5 cut(s) 820, 1686, 4703, 7514, 7604
Tth111I GACNNNGTC 1 cut(s) 194
Van91I CCANNNNNTGG 4 cut(s) 721, 1204, 3099, 7362
Vha464I CTTAAG 3 cut(s) 1361, 2003, 6164
VneI GTGCAC 1 cut(s) 6288
VpaK11BI GGWCC 9 cut(s) 364, 461, 724, 890, 2650, 3109, 4651, 5205, 7309
VspI ATTAAT 3 cut(s) 4413, 5123, 5898
XagI CCTNNNNNAGG 3 cut(s) 261, 845, 3656
XbaI TCTAGA 2 cut(s) 4537, 6935
XhoI CTCGAG 3 cut(s) 3104, 5337, 5978
XmiI GTMKAC 2 cut(s) 1989, 2553
XmnI GAANNNNTTC 2 cut(s) 1356, 1502
ZraI GACGTC 1 cut(s) 6741
Zsp2I ATGCAT 4 cut(s) 2648, 2730, 4258, 6896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.