FvH4_5g12830

C3HC zinc finger-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0008062
Physical Location & Seq
Reverse (-)
7257638 .. 7263345
5708 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g12830.t1

Sequence Viewer

Length: 1986 bp
ATGGCGAAAGATTCCGAGAAGAGGTTCAATTCCGTCATGGACAAGCTCTTCTACGCTCCCAGACCTTCGCCGAGCTCCACCTCCAGTTCATCGAGTCTAGAAGCATCGAGAGGTAAGAAGCGAGCACATCCGTCGTCTGCATTGGCGCTGGTGGAGCCGAAATCGAGAGGTGTTAGAGAGCAGGGGTTTCGGCATTGCTCAGCTCCGGCTTCACCGTCTCAGCCACCGGTGTGTAGGCCGTGGGACCGAGGGGATCTTATGAGGAGAGTAGCTACATTTAAGTCTATGACTTGGTTTGCAAAGCCGAAGGTGGTAAGTGCTTTAAATTGTGCCAGGAGAGGTTGGATCAACATAGATGTGGATATAATAGCCTGTGAATCATGTGGGGCACGCCTTTTGTTTTCTACTCCATCATCTTGGAATCAACAGCAAGTTGAGAAAGCAGCTTTGGTATTTAGTTTAAAGCTGGAAAATGGACATAAAATGCTTTGTCCATGGATTGACAATGCCTGTGATGAAAAGCTGGCAGAGTTCCCACCTACACCACCTCCAATTTTAGTGGATAAGTTTAAAGAGCGATGCTCTGTGATTTTACAACTTCCGGTTCTTCCTGTGATTTCTTCTTCAACCATTCAGTACATGAAATGCCCTCAGCTTGATCAATTTCTTGGACATACTTCGATATTTTTTGGCAATGGGTCTGCTGAAATTTCTAGAATAGAACACTCTGATGATGAAGGCAGTGCAGAGTCTGCTAAGTTGTATTATCAGGCACAGAAGATTATAAGCTTATGCGGCTGGGAACCTCGCTCACTACCTTATATTGTCGACTCTGGGAAGAGGTTGAATCAGTCTACAGCAAAGGAAAATGTTTTGAGTTCTTCTCATTTAGCTGCTAACAGCCAATATCCTATCATCAGTGTGCAATCTGCTAGTAATCATGACCTAATTGAGGAAAATGAAACTTTCAGCAGTTCTAGTGCTCTACAGTCTGAGTCCAATTCTGTGGTATTAGATTGCAAGCTTTGTGGAGCTAGTGTAGGATTATGGGCGTTCACTACCGTTCCACGGCCTGTTGAGTTATTTCATTTAGTTGGATATGCAGAAGAAAATTCTGGAACTCATCCTGGAACCAATGATTCAAGCACTGAAAGTCATCTTGCTGGCTCAGATGGTGCAACATCGTCAAAGGATAGATTTTCAAATTTAAATTTGACAATTGCTGGGGGTCCCACACCAACAAAACAGAACTTTAAAGCAAAGATCTCCTTACCTGTTATTGGCCAGAATTTAAGAGCTCAGTTTTCATATAACTCTGAATTCAGAGACTGTTTATCTGTTAATCAAGAAGACATGCAATCTGGACCCCAAAAAGAGAACCTGCTTCAGGGGGGAGAATGCTACCTAGAAAATGCAGCAAATAGTGCATTGGAGAATTCAGAAGTCAGGGACCCTGGTCATCCTACATCACCTGGTGCCAACAACGCATATGAAGGCAGTGAAGACAACAATAACTTGCTGGTGATGGCTTCTAGCAATGGAAATTTGTTAGATTCAGGAACAGTTGTGGAGCACAGGCAGATTCAAGAATCTCCATGTGCTCCGTCTAGCTTGCAAACCAGTGCAGTTGCCCATTGCACCTCAAACCATGAAGGTAGTGGAGAGAAACTGCTGATTCCTGTAAACAAGGAACTTGTGGCATGCAGTGGGAAAGATCTTAAGCATGCATCACCAGGTGGCACGATGGAGTTTGATTCTATTAAGCAGCATAGACATTTCTGCCCCTGGATTGCATCAACAGGTAATGGAGTACCTGGATGGAAACAAACACTGTTGGCTTTACAACGTCAAGAAGGGTGTTCTCCTTCATCTGCATCCATAATCAAGGTCGATGACCCCATTACTTCGATTAGAAATCTGTTCATGTCTCCATCTCCGAAAAGAATGAAGCCCACACTTTCAACAACCCGGAGTCCACAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC

Protein Analysis

662

Amino Acids

71.83

Weight (kDa)

6.64

Isoelectric Point (pI)

57.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC PF07967 80 - 203 1.8e-33 NuBaID N-terminal domain (aka zf-C3HC)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 785
Acc36I ACCTGC 1 cut(s) 1389
AccB1I GGYRCC 1 cut(s) 1475
AccI GTMKAC 2 cut(s) 828, 854
AciI CCGC 1 cut(s) 795
AclWI GGATC 2 cut(s) 261, 353
AcoI YGGCCR 1 cut(s) 1282
AcsI RAATTY 8 cut(s) 708, 1111, 1204, 1210, 1288, 1319, 1435, 1543
AcuI CTGAAG 1 cut(s) 1370
AdeI CACNNNGTG 2 cut(s) 1475, 1736
AfaI GTAC 2 cut(s) 638, 1812
AfiI CCNNNNNNNGG 5 cut(s) 21, 952, 1068, 1280, 1387
AflII CTTAAG 1 cut(s) 1718
AgeI ACCGGT 1 cut(s) 226
AgsI TTSAA 7 cut(s) 28, 627, 847, 1143, 1203, 1586, 1962
AjnI CCWGG 7 cut(s) 332, 1126, 1453, 1471, 1732, 1784, 1813
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AleI CACNNNNGTG 1 cut(s) 229
Alw21I GWGCWC 6 cut(s) 77, 127, 985, 1300, 1575, 1603
Alw26I GTCTC 3 cut(s) 222, 1320, 1932
AlwI GGATC 2 cut(s) 261, 353
AlwNI CAGNNNCTG 2 cut(s) 752, 1329
AoxI GGCC 3 cut(s) 236, 1070, 1282
ApeKI GCWGC 4 cut(s) 443, 893, 1415, 1765
ApoI RAATTY 8 cut(s) 708, 1111, 1204, 1210, 1288, 1319, 1435, 1543
AsiGI ACCGGT 1 cut(s) 226
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 148
AspS9I GGNCC 4 cut(s) 244, 1229, 1364, 1450
AsuC2I CCSGG 1 cut(s) 1969
AsuHPI GGTGA 4 cut(s) 204, 1461, 1534, 1722
AvaII GGWCC 4 cut(s) 244, 1229, 1364, 1450
BaeGI GKGCMC 1 cut(s) 391
BalI TGGCCA 1 cut(s) 1284
BanI GGYRCC 1 cut(s) 1475
BanII GRGCYC 2 cut(s) 77, 1300
BbsI GAAGAC 2 cut(s) 1356, 1509
Bbv12I GWGCWC 6 cut(s) 77, 127, 985, 1300, 1575, 1603
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 4 cut(s) 455, 880, 1427, 1777
BccI CCATC 6 cut(s) 418, 1166, 1519, 1738, 1812, 1939
BceAI ACGGC 2 cut(s) 223, 1085
BcgI CGANNNNNNTGC 4 cut(s) 114, 148, 170, 204
BciT130I CCWGG 7 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815
BclI TGATCA 1 cut(s) 658
BcnI CCSGG 1 cut(s) 1969
BcoDI GTCTC 3 cut(s) 222, 1320, 1932
BfaI CTAG 8 cut(s) 98, 714, 933, 978, 1035, 1406, 1533, 1608
BfmI CTRYAG 2 cut(s) 855, 986
BfoI RGCGCY 1 cut(s) 149
BfrI CTTAAG 1 cut(s) 1718
BfuAI ACCTGC 1 cut(s) 1389
BglII AGATCT 2 cut(s) 1263, 1714
BisI GCNGC 5 cut(s) 444, 796, 894, 1416, 1766
BlpI GCTNAGC 1 cut(s) 199
BlsI GCNGC 5 cut(s) 445, 797, 895, 1417, 1767
Bme1390I CCNGG 8 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815, 1969
Bme18I GGWCC 4 cut(s) 244, 1229, 1364, 1450
BmgT120I GGNCC 4 cut(s) 244, 1229, 1364, 1450
BmrFI CCNGG 8 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815, 1969
BmsI GCATC 5 cut(s) 113, 569, 1736, 1802, 1883
BoxI GACNNNNGTC 1 cut(s) 1455
BpiI GAAGAC 2 cut(s) 1356, 1509
BplI GAGNNNNNCTC 4 cut(s) 566, 598, 868, 900
BpmI CTGGAG 1 cut(s) 67
Bpu10I CCTNAGC 1 cut(s) 651
Bpu1102I GCTNAGC 1 cut(s) 199
BpuMI CCSGG 1 cut(s) 1969
BsaJI CCNNGG 6 cut(s) 239, 247, 494, 1067, 1453, 1784
BsaWI WCCGGW 2 cut(s) 226, 601
BsaXI ACNNNNNCTCC 4 cut(s) 532, 562, 1023, 1053
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 952, 1068, 1280, 1387
Bse118I RCCGGY 1 cut(s) 226
Bse1I ACTGG 2 cut(s) 84, 1620
Bse3DI GCAATG 4 cut(s) 193, 700, 1543, 1633
BseBI CCWGG 7 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815
BseDI CCNNGG 6 cut(s) 239, 247, 494, 1067, 1453, 1784
BseGI GGATG 5 cut(s) 127, 1123, 1459, 1823, 1874
BseLI CCNNNNNNNGG 5 cut(s) 21, 952, 1068, 1280, 1387
BseMI GCAATG 4 cut(s) 193, 700, 1543, 1633
BseMII CTCAG 6 cut(s) 213, 233, 665, 984, 1182, 1313
BseNI ACTGG 2 cut(s) 84, 1620
BseRI GAGGAG 1 cut(s) 277
BseSI GKGCMC 1 cut(s) 391
BseXI GCAGC 4 cut(s) 455, 880, 1427, 1777
BseYI CCCAGC 2 cut(s) 798, 1223
BsgI GTGCAG 2 cut(s) 765, 1644
BshFI GGCC 3 cut(s) 238, 1072, 1284
BshNI GGYRCC 1 cut(s) 1475
BshTI ACCGGT 1 cut(s) 226
BsiHKAI GWGCWC 6 cut(s) 77, 127, 985, 1300, 1575, 1603
BsiSI CCGG 4 cut(s) 206, 227, 602, 1969
BslFI GGGAC 3 cut(s) 257, 1215, 1463
BslI CCNNNNNNNGG 5 cut(s) 21, 952, 1068, 1280, 1387
BsmAI GTCTC 3 cut(s) 222, 1320, 1932
BsmBI CGTCTC 1 cut(s) 222
BsmFI GGGAC 3 cut(s) 257, 1215, 1463
BsmI GAATGC 1 cut(s) 1403
BsnI GGCC 3 cut(s) 238, 1072, 1284
Bsp1286I GDGCHC 7 cut(s) 77, 127, 391, 985, 1300, 1575, 1603
Bsp143I GATC 5 cut(s) 253, 345, 658, 1263, 1714
Bsp1720I GCTNAGC 1 cut(s) 199
Bsp19I CCATGG 1 cut(s) 494
BspACI CCGC 1 cut(s) 795
BspANI GGCC 3 cut(s) 238, 1072, 1284
BspCNI CTCAG 6 cut(s) 212, 232, 664, 985, 1181, 1312
BspHI TCATGA 1 cut(s) 940
BspMI ACCTGC 1 cut(s) 1389
BspPI GGATC 2 cut(s) 261, 353
BspQI GCTCTTC 1 cut(s) 53
BspT107I GGYRCC 1 cut(s) 1475
BspTI CTTAAG 1 cut(s) 1718
BsrDI GCAATG 4 cut(s) 193, 700, 1543, 1633
BsrFI RCCGGY 1 cut(s) 226
BsrI ACTGG 2 cut(s) 84, 1620
BssAI RCCGGY 1 cut(s) 226
BssECI CCNNGG 6 cut(s) 239, 247, 494, 1067, 1453, 1784
BssMI GATC 5 cut(s) 253, 345, 658, 1263, 1714
BssT1I CCWWGG 1 cut(s) 494
Bst2UI CCWGG 7 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815
Bst4CI ACNGT 6 cut(s) 216, 990, 1063, 1331, 1564, 1833
Bst6I CTCTTC 3 cut(s) 14, 53, 833
BstAFI CTTAAG 1 cut(s) 1718
BstAPI GCANNNNNTGC 2 cut(s) 752, 1424
BstC8I GCNNGC 8 cut(s) 123, 391, 525, 1022, 1165, 1613, 1702, 1725
BstDEI CTNAG 7 cut(s) 199, 219, 651, 756, 993, 1168, 1299
BstDSI CCRYGG 3 cut(s) 239, 494, 1067
BstENI CCTNNNNNAGG 2 cut(s) 950, 1385
BstF5I GGATG 5 cut(s) 127, 1123, 1459, 1823, 1874
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 1 cut(s) 148
BstKTI GATC 5 cut(s) 256, 348, 661, 1266, 1717
BstMAI GTCTC 3 cut(s) 222, 1320, 1932
BstMBI GATC 5 cut(s) 253, 345, 658, 1263, 1714
BstMWI GCNNNNNNNGC 5 cut(s) 154, 752, 795, 1424, 1484
BstNI CCWGG 7 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815
BstNSI RCATGY 3 cut(s) 1357, 1704, 1727
BstPAI GACNNNNGTC 1 cut(s) 1455
BstSCI CCNGG 8 cut(s) 332, 1126, 1453, 1471, 1732, 1784, 1813, 1967
BstSFI CTRYAG 2 cut(s) 855, 986
BstSLI GKGCMC 1 cut(s) 391
BstV1I GCAGC 4 cut(s) 455, 880, 1427, 1777
BstV2I GAAGAC 2 cut(s) 1356, 1509
BstX2I RGATCY 3 cut(s) 253, 1263, 1714
BstXI CCANNNNNNTGG 2 cut(s) 417, 1006
BstYI RGATCY 3 cut(s) 253, 1263, 1714
BsuRI GGCC 3 cut(s) 238, 1072, 1284
BtgI CCRYGG 3 cut(s) 239, 494, 1067
BtgZI GCGATG 1 cut(s) 592
BtsCI GGATG 5 cut(s) 127, 1123, 1459, 1823, 1874
BtsI GCAGTG 3 cut(s) 748, 1504, 1711
BtsIMutI CAGTG 7 cut(s) 748, 925, 1146, 1504, 1627, 1711, 1829
BveI ACCTGC 1 cut(s) 1389
Cac8I GCNNGC 8 cut(s) 123, 391, 525, 1022, 1165, 1613, 1702, 1725
CaiI CAGNNNCTG 2 cut(s) 752, 1329
CciI TCATGA 1 cut(s) 940
CfoI GCGC 1 cut(s) 148
Cfr10I RCCGGY 1 cut(s) 226
Cfr13I GGNCC 4 cut(s) 244, 1229, 1364, 1450
CsiI ACCWGGT 2 cut(s) 1471, 1732
Csp6I GTAC 2 cut(s) 637, 1811
CspAI ACCGGT 1 cut(s) 226
CspCI CAANNNNNGTGG 4 cut(s) 540, 575, 1009, 1044
CviQI GTAC 2 cut(s) 637, 1811
DdeI CTNAG 7 cut(s) 199, 219, 651, 756, 993, 1168, 1299
DpnI GATC 5 cut(s) 255, 347, 660, 1265, 1716
DpnII GATC 5 cut(s) 253, 345, 658, 1263, 1714
DraI TTTAAA 5 cut(s) 324, 462, 571, 1209, 1255
DraIII CACNNNGTG 2 cut(s) 1475, 1736
EaeI YGGCCR 1 cut(s) 1282
Eam1104I CTCTTC 3 cut(s) 14, 53, 833
EarI CTCTTC 3 cut(s) 14, 53, 833
Ecl136II GAGCTC 2 cut(s) 75, 1298
Eco130I CCWWGG 1 cut(s) 494
Eco24I GRGCYC 2 cut(s) 77, 1300
Eco47I GGWCC 4 cut(s) 244, 1229, 1364, 1450
Eco53kI GAGCTC 2 cut(s) 75, 1298
Eco57I CTGAAG 1 cut(s) 1370
EcoICRI GAGCTC 2 cut(s) 75, 1298
EcoNI CCTNNNNNAGG 2 cut(s) 950, 1385
EcoO109I RGGNCCY 2 cut(s) 1229, 1450
EcoRI GAATTC 2 cut(s) 1319, 1435
EcoRII CCWGG 7 cut(s) 332, 1126, 1453, 1471, 1732, 1784, 1813
EcoT14I CCWWGG 1 cut(s) 494
EcoT22I ATGCAT 1 cut(s) 1729
EcoT38I GRGCYC 2 cut(s) 77, 1300
ErhI CCWWGG 1 cut(s) 494
Esp3I CGTCTC 1 cut(s) 222
FalI AAGNNNNNCTT 2 cut(s) 1253, 1285
FaqI GGGAC 3 cut(s) 257, 1215, 1463
FauNDI CATATG 1 cut(s) 1489
FbaI TGATCA 1 cut(s) 658
FblI GTMKAC 2 cut(s) 828, 854
Fnu4HI GCNGC 5 cut(s) 444, 796, 894, 1416, 1766
FokI GGATG 5 cut(s) 114, 1110, 1446, 1830, 1861
FriOI GRGCYC 2 cut(s) 77, 1300
Fsp4HI GCNGC 5 cut(s) 444, 796, 894, 1416, 1766
FspBI CTAG 8 cut(s) 98, 714, 933, 978, 1035, 1406, 1533, 1608
GlaI GCGC 1 cut(s) 147
GluI GCNGC 5 cut(s) 444, 796, 894, 1416, 1766
GsaI CCCAGC 2 cut(s) 802, 1227
GsuI CTGGAG 1 cut(s) 67
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 3 cut(s) 238, 1072, 1284
HapII CCGG 4 cut(s) 206, 227, 602, 1969
HhaI GCGC 1 cut(s) 148
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HincII GTYRAC 1 cut(s) 829
HindII GTYRAC 1 cut(s) 829
HindIII AAGCTT 2 cut(s) 787, 1022
HpaII CCGG 4 cut(s) 206, 227, 602, 1969
HphI GGTGA 4 cut(s) 204, 1461, 1534, 1722
Hpy166II GTNNAC 5 cut(s) 829, 855, 1056, 1684, 1976
Hpy188I TCNGA 8 cut(s) 16, 730, 994, 1171, 1318, 1325, 1441, 1938
Hpy8I GTNNAC 5 cut(s) 829, 855, 1056, 1684, 1976
Hpy99I CGWCG 1 cut(s) 136
HpyAV CCTTC 7 cut(s) 75, 301, 731, 1487, 1646, 1847, 1875
HpyCH4III ACNGT 6 cut(s) 216, 990, 1063, 1331, 1564, 1833
HpyCH4IV ACGT 1 cut(s) 1846
HpyF10VI GCNNNNNNNGC 5 cut(s) 154, 752, 795, 1424, 1484
HpyF3I CTNAG 7 cut(s) 199, 219, 651, 756, 993, 1168, 1299
HpySE526I ACGT 1 cut(s) 1846
HspAI GCGC 1 cut(s) 146
KflI GGGWCCC 2 cut(s) 1229, 1450
Ksp22I TGATCA 1 cut(s) 658
Kzo9I GATC 5 cut(s) 253, 345, 658, 1263, 1714
LguI GCTCTTC 1 cut(s) 53
LmnI GCTCC 7 cut(s) 61, 80, 154, 208, 1031, 1570, 1606
Lsp1109I GCAGC 4 cut(s) 455, 880, 1427, 1777
LweI GCATC 5 cut(s) 113, 569, 1736, 1802, 1883
MabI ACCWGGT 2 cut(s) 1471, 1732
MaeI CTAG 8 cut(s) 98, 714, 933, 978, 1035, 1406, 1533, 1608
MaeII ACGT 1 cut(s) 1846
MalI GATC 5 cut(s) 255, 347, 660, 1265, 1716
MboI GATC 5 cut(s) 253, 345, 658, 1263, 1714
MfeI CAATTG 1 cut(s) 1218
MflI RGATCY 3 cut(s) 253, 1263, 1714
MhlI GDGCHC 7 cut(s) 77, 127, 391, 985, 1300, 1575, 1603
MlsI TGGCCA 1 cut(s) 1284
MluNI TGGCCA 1 cut(s) 1284
MlyI GAGTC 5 cut(s) 103, 758, 824, 1004, 1981
MmeI TCCRAC 2 cut(s) 323, 1075
Mox20I TGGCCA 1 cut(s) 1284
Mph1103I ATGCAT 1 cut(s) 1729
MroXI GAANNNNTTC 1 cut(s) 23
MscI TGGCCA 1 cut(s) 1284
MslI CAYNNNNRTG 4 cut(s) 229, 356, 729, 920
Msp20I TGGCCA 1 cut(s) 1284
MspCI CTTAAG 1 cut(s) 1718
MspI CCGG 4 cut(s) 206, 227, 602, 1969
MspR9I CCNGG 8 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815, 1969
MunI CAATTG 1 cut(s) 1218
Mva1269I GAATGC 1 cut(s) 1403
MvaI CCWGG 7 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815
MwoI GCNNNNNNNGC 5 cut(s) 154, 752, 795, 1424, 1484
NciI CCSGG 1 cut(s) 1969
NcoI CCATGG 1 cut(s) 494
NdeI CATATG 1 cut(s) 1489
NdeII GATC 5 cut(s) 253, 345, 658, 1263, 1714
NmeAIII GCCGAG 1 cut(s) 96
NsiI ATGCAT 1 cut(s) 1729
NspI RCATGY 3 cut(s) 1357, 1704, 1727
OliI CACNNNNGTG 1 cut(s) 229
PaeI GCATGC 2 cut(s) 1704, 1727
PagI TCATGA 1 cut(s) 940
PciSI GCTCTTC 1 cut(s) 53
PctI GAATGC 1 cut(s) 1403
PdmI GAANNNNTTC 1 cut(s) 23
PfoI TCCNGGA 1 cut(s) 1126
PinAI ACCGGT 1 cut(s) 226
PkrI GCNGC 5 cut(s) 445, 797, 895, 1417, 1767
PleI GAGTC 5 cut(s) 102, 757, 824, 1003, 1980
PpsI GAGTC 5 cut(s) 102, 757, 824, 1003, 1980
PpuMI RGGWCCY 2 cut(s) 1229, 1450
PshAI GACNNNNGTC 1 cut(s) 1455
PsiI TTATAA 1 cut(s) 785
Psp124BI GAGCTC 2 cut(s) 77, 1300
Psp5II RGGWCCY 2 cut(s) 1229, 1450
Psp6I CCWGG 7 cut(s) 332, 1126, 1453, 1471, 1732, 1784, 1813
PspFI CCCAGC 2 cut(s) 798, 1223
PspGI CCWGG 7 cut(s) 332, 1126, 1453, 1471, 1732, 1784, 1813
PspPI GGNCC 4 cut(s) 244, 1229, 1364, 1450
PspPPI RGGWCCY 2 cut(s) 1229, 1450
PstNI CAGNNNCTG 2 cut(s) 752, 1329
PsuI RGATCY 3 cut(s) 253, 1263, 1714
RsaI GTAC 2 cut(s) 638, 1812
RsaNI GTAC 2 cut(s) 637, 1811
RseI CAYNNNNRTG 4 cut(s) 229, 356, 729, 920
SacI GAGCTC 2 cut(s) 77, 1300
SalI GTCGAC 1 cut(s) 827
SapI GCTCTTC 1 cut(s) 53
SatI GCNGC 5 cut(s) 444, 796, 894, 1416, 1766
Sau3AI GATC 5 cut(s) 253, 345, 658, 1263, 1714
Sau96I GGNCC 4 cut(s) 244, 1229, 1364, 1450
SchI GAGTC 5 cut(s) 103, 758, 824, 1004, 1981
ScrFI CCNGG 8 cut(s) 334, 1128, 1455, 1473, 1734, 1786, 1815, 1969
SduI GDGCHC 7 cut(s) 77, 127, 391, 985, 1300, 1575, 1603
SexAI ACCWGGT 2 cut(s) 1471, 1732
SfaNI GCATC 5 cut(s) 113, 569, 1736, 1802, 1883
SfcI CTRYAG 2 cut(s) 855, 986
SgrAI CRCCGGYG 1 cut(s) 226
SinI GGWCC 4 cut(s) 244, 1229, 1364, 1450
SmiI ATTTAAAT 1 cut(s) 1209
SmiMI CAYNNNNRTG 4 cut(s) 229, 356, 729, 920
SmlI CTYRAG 1 cut(s) 1718
SmoI CTYRAG 1 cut(s) 1718
SphI GCATGC 2 cut(s) 1704, 1727
SsiI CCGC 1 cut(s) 795
SspMI CTAG 8 cut(s) 98, 714, 933, 978, 1035, 1406, 1533, 1608
SstI GAGCTC 2 cut(s) 77, 1300
StyD4I CCNGG 8 cut(s) 332, 1126, 1453, 1471, 1732, 1784, 1813, 1967
StyI CCWWGG 1 cut(s) 494
SwaI ATTTAAAT 1 cut(s) 1209
TaaI ACNGT 6 cut(s) 216, 990, 1063, 1331, 1564, 1833
TaiI ACGT 1 cut(s) 1849
TaqI TCGA 7 cut(s) 92, 107, 164, 680, 828, 1890, 1907
TaqII GACCGA 1 cut(s) 261
TatI WGTACW 1 cut(s) 636
TauI GCSGC 1 cut(s) 798
TscAI CASTG 7 cut(s) 748, 925, 1153, 1504, 1627, 1711, 1836
TseI GCWGC 4 cut(s) 443, 893, 1415, 1765
TspGWI ACGGA 3 cut(s) 22, 120, 1593
TspRI CASTG 7 cut(s) 748, 925, 1153, 1504, 1627, 1711, 1836
Vha464I CTTAAG 1 cut(s) 1718
VpaK11BI GGWCC 4 cut(s) 244, 1229, 1364, 1450
XagI CCTNNNNNAGG 2 cut(s) 950, 1385
XapI RAATTY 8 cut(s) 708, 1111, 1204, 1210, 1288, 1319, 1435, 1543
XbaI TCTAGA 2 cut(s) 97, 713
XceI RCATGY 3 cut(s) 1357, 1704, 1727
XcmI CCANNNNNNNNNTGG 1 cut(s) 1655
XmiI GTMKAC 2 cut(s) 828, 854
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 8 cut(s) 98, 714, 933, 978, 1035, 1406, 1533, 1608
Zsp2I ATGCAT 1 cut(s) 1729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.