Rh7CG067100

C3HC zinc finger-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
4809651 .. 4814233
4583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG067100.1

Sequence Viewer

Length: 1494 bp
ATGCTGGCAGAGTTCCCGCCTACACCACCTCCAGTTTTAGTGGATAAATTTAGAGAGCGCTGCTCTGCGATTTTACAACTTCCGGTTCTTCCTGTGATATCTTCTTCAGCCATTGAGTACATGAAAAGCCCTCAGCTTGATCAATTTCTTGGACAGTCTTCGATATTTTTTGGCAATGGGTCTACTGAAATTCCTAGAATAGAACACTCTGATGATGAAGGCAGTGCAGAGTCTGCTAAGTTGTATTATCAGGCACAGAAGCTTATAAGCTTATGTGGTTGGGAACCTCGCTCACTACCTTATATTGTCGACTCTGAGAAGAGGTTGAATCAGTCTACACCTAAGGCAAATGTTTTGAGTTCATCTCATTTTACTGCTAACAGCCAATATCCTATCATCAGTGTGCAATATGCCAGTAATCATGACCTAATTGAGGCAAATGAAACTTTCAGCAGTTCTAGTGCTCTACAGTCTGAATCCAATTCTGTGGTTTTAGATTGCAAGCTTTGTGGAGCTAGTGTTGGATTATGGGCTTTCACTACCGTTCCACGGCCTGTTGAATTATTTCAATTAGTTGGATATGCAGAAGAAAATTCTGAAACTCATCTTGGAACCCATGATTCAAGCACTGAAAGTCATCTTGGCAATAGGACAGATGTGGTAAGTGCTGGCTCAGATGGTGCAACAGCGTCAAAGAATAGATTTTCAAATTTAAATTTGACAATTGCAGGGGGTCCCACACCAACAAAACAGAACTTTAAAGCAAAGATTTCCTTACCTGTTATTGGCCAGAATTTAAGAGCTCAGTTTTCATATAATTCTGAATTCAGAGAATGTTTATCTGTTGGCCAAGAAGACATGCAATCTGGATCCCAAAAAGAGAATTTGCTTCAGGGGGGAGAATGTTACCTAGAAAATGCAGAAAATGTTGGATTGGAGAATTCAGAAGTCAGTGACCCTGGTCATTCCACAGCCCCTGATGCCAATAACACGTATAAAGGCGGCGAAGACAACAATAACTTGCTGGTGATGGCTTCTAGCAATGGAGATTTGTTAGATTCAGGAACAGTTGTGGAACACAGGCAGTCTCAAGAGTCTCCATGTGCTCCATCTAGCTTGGAAGCCAGTGCAGTTACCCATTGCACCTCAAACCATGAAGTTAGTCAAGAGAAACTGCAGATTCCTGTAAACAATGAACTTGTGGCCTGCAATACTGGGAAAGATCTAAGGCATGCATCCCCAGGTGGCACGATGGAGTTTGATTCTATTAAGCAGCATAGACATTTCTGCCCCTGGATTGCATCAACAGGTAATGGAGCACCTGGATGGAGACAAACACTCTCAGCTTTACAACGTCAAGATGGGTGTTCTCCTTCATCTGCATCCATAATCAAGGTTGATGACCCCATTACTTCAATAAGAAATCTTTTCATGTCTCCATCTCCGAAAAGAATGAAGCCCACAGTTTTAACAACTCGGAGTCCTCAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

497

Amino Acids

53.81

Weight (kDa)

5.18

Isoelectric Point (pI)

58.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 266
AccI GTMKAC 3 cut(s) 182, 309, 335
AciI CCGC 2 cut(s) 17, 1002
AclWI GGATC 2 cut(s) 864, 877
AcoI YGGCCR 2 cut(s) 787, 847
AcsI RAATTY 9 cut(s) 47, 189, 592, 709, 715, 793, 824, 883, 940
AcuI CTGAAG 2 cut(s) 90, 875
AfaI GTAC 1 cut(s) 119
AfeI AGCGCT 1 cut(s) 59
AfiI CCNNNNNNNGG 3 cut(s) 433, 549, 785
AflIII ACRYGT 1 cut(s) 990
AgsI TTSAA 6 cut(s) 328, 560, 569, 624, 708, 1416
AjnI CCWGG 4 cut(s) 958, 1240, 1292, 1321
AjuI GAANNNNNNNTTGG 4 cut(s) 591, 623, 624, 656
AluBI AGCT 8 cut(s) 136, 262, 270, 505, 515, 803, 1116, 1346
AluI AGCT 8 cut(s) 136, 262, 270, 505, 515, 803, 1116, 1346
Alw21I GWGCWC 4 cut(s) 466, 805, 1108, 1321
Alw26I GTCTC 4 cut(s) 1092, 1101, 1324, 1440
AlwI GGATC 2 cut(s) 864, 877
AlwNI CAGNNNCTG 2 cut(s) 233, 977
Aor51HI AGCGCT 1 cut(s) 59
AoxI GGCC 4 cut(s) 551, 787, 847, 1203
ApeKI GCWGC 2 cut(s) 60, 1273
ApoI RAATTY 9 cut(s) 47, 189, 592, 709, 715, 793, 824, 883, 940
Asp700I GAANNNNTTC 1 cut(s) 564
AspLEI GCGC 1 cut(s) 60
AspS9I GGNCC 1 cut(s) 734
AsuHPI GGTGA 1 cut(s) 1039
AvaII GGWCC 1 cut(s) 734
AxyI CCTNAGG 1 cut(s) 342
BalI TGGCCA 2 cut(s) 789, 849
BamHI GGATCC 1 cut(s) 869
BanII GRGCYC 1 cut(s) 805
BbsI GAAGAC 3 cut(s) 150, 861, 1014
Bbv12I GWGCWC 4 cut(s) 466, 805, 1108, 1321
BbvCI CCTCAGC 1 cut(s) 132
BbvI GCAGC 2 cut(s) 47, 1285
BccI CCATC 7 cut(s) 671, 1024, 1117, 1246, 1320, 1355, 1447
BceAI ACGGC 1 cut(s) 566
BciT130I CCWGG 4 cut(s) 960, 1242, 1294, 1323
BclI TGATCA 1 cut(s) 139
BcoDI GTCTC 4 cut(s) 1092, 1101, 1324, 1440
BfaI CTAG 6 cut(s) 195, 459, 516, 911, 1038, 1113
BfmI CTRYAG 2 cut(s) 467, 1175
BfoI RGCGCY 1 cut(s) 61
BglII AGATCT 1 cut(s) 1222
BisI GCNGC 3 cut(s) 61, 1003, 1274
BlsI GCNGC 3 cut(s) 62, 1004, 1275
Bme1390I CCNGG 4 cut(s) 960, 1242, 1294, 1323
Bme18I GGWCC 1 cut(s) 734
BmgT120I GGNCC 1 cut(s) 734
BmiI GGNNCC 5 cut(s) 285, 613, 735, 736, 871
BmrFI CCNGG 4 cut(s) 960, 1242, 1294, 1323
BmrI ACTGGG 1 cut(s) 1224
BmsI GCATC 4 cut(s) 970, 1244, 1310, 1391
BmuI ACTGGG 1 cut(s) 1224
BoxI GACNNNNGTC 1 cut(s) 960
BpiI GAAGAC 3 cut(s) 150, 861, 1014
BplI GAGNNNNNCTC 4 cut(s) 47, 79, 349, 381
BpmI CTGGAG 1 cut(s) 15
Bpu10I CCTNAGC 1 cut(s) 132
BpuEI CTTGAG 1 cut(s) 1074
BsaAI YACGTR 1 cut(s) 993
BsaJI CCNNGG 4 cut(s) 548, 958, 1240, 1292
BsaWI WCCGGW 1 cut(s) 82
BsaXI ACNNNNNCTCC 4 cut(s) 13, 43, 504, 534
Bsc4I CCNNNNNNNGG 3 cut(s) 433, 549, 785
Bse1I ACTGG 4 cut(s) 32, 414, 1125, 1219
Bse21I CCTNAGG 1 cut(s) 342
Bse3DI GCAATG 3 cut(s) 181, 1048, 1138
BseBI CCWGG 4 cut(s) 960, 1242, 1294, 1323
BseDI CCNNGG 4 cut(s) 548, 958, 1240, 1292
BseGI GGATG 3 cut(s) 1235, 1331, 1382
BseLI CCNNNNNNNGG 3 cut(s) 433, 549, 785
BseMI GCAATG 3 cut(s) 181, 1048, 1138
BseMII CTCAG 5 cut(s) 146, 306, 687, 818, 1356
BseNI ACTGG 4 cut(s) 32, 414, 1125, 1219
BseXI GCAGC 2 cut(s) 47, 1285
BsgI GTGCAG 2 cut(s) 246, 1149
BshFI GGCC 4 cut(s) 553, 789, 849, 1205
BsiHKAI GWGCWC 4 cut(s) 466, 805, 1108, 1321
BsiSI CCGG 1 cut(s) 83
BslFI GGGAC 1 cut(s) 720
BslI CCNNNNNNNGG 3 cut(s) 433, 549, 785
BsmAI GTCTC 4 cut(s) 1092, 1101, 1324, 1440
BsmFI GGGAC 1 cut(s) 720
BsnI GGCC 4 cut(s) 553, 789, 849, 1205
Bsp1286I GDGCHC 4 cut(s) 466, 805, 1108, 1321
Bsp143I GATC 3 cut(s) 139, 869, 1222
BspACI CCGC 2 cut(s) 17, 1002
BspANI GGCC 4 cut(s) 553, 789, 849, 1205
BspCNI CTCAG 5 cut(s) 145, 307, 686, 817, 1355
BspHI TCATGA 1 cut(s) 421
BspLI GGNNCC 5 cut(s) 285, 613, 735, 736, 871
BspMAI CTGCAG 1 cut(s) 1179
BspPI GGATC 2 cut(s) 864, 877
BsrDI GCAATG 3 cut(s) 181, 1048, 1138
BsrI ACTGG 4 cut(s) 32, 414, 1125, 1219
BssECI CCNNGG 4 cut(s) 548, 958, 1240, 1292
BssMI GATC 3 cut(s) 139, 869, 1222
Bst2UI CCWGG 4 cut(s) 960, 1242, 1294, 1323
Bst4CI ACNGT 5 cut(s) 156, 471, 544, 1069, 1465
Bst6I CTCTTC 1 cut(s) 314
BstAPI GCANNNNNTGC 1 cut(s) 233
BstBAI YACGTR 1 cut(s) 993
BstC8I GCNNGC 5 cut(s) 6, 503, 670, 1207, 1233
BstDEI CTNAG 8 cut(s) 132, 237, 315, 342, 673, 804, 1226, 1342
BstDSI CCRYGG 1 cut(s) 548
BstENI CCTNNNNNAGG 1 cut(s) 431
BstF5I GGATG 3 cut(s) 1235, 1331, 1382
BstH2I RGCGCY 1 cut(s) 61
BstHHI GCGC 1 cut(s) 60
BstKTI GATC 3 cut(s) 142, 872, 1225
BstMAI GTCTC 4 cut(s) 1092, 1101, 1324, 1440
BstMBI GATC 3 cut(s) 139, 869, 1222
BstMWI GCNNNNNNNGC 2 cut(s) 233, 980
BstNI CCWGG 4 cut(s) 960, 1242, 1294, 1323
BstNSI RCATGY 2 cut(s) 862, 1235
BstPAI GACNNNNGTC 1 cut(s) 960
BstSCI CCNGG 4 cut(s) 958, 1240, 1292, 1321
BstSFI CTRYAG 2 cut(s) 467, 1175
BstV1I GCAGC 2 cut(s) 47, 1285
BstV2I GAAGAC 3 cut(s) 150, 861, 1014
BstX2I RGATCY 2 cut(s) 869, 1222
BstXI CCANNNNNNTGG 1 cut(s) 487
BstYI RGATCY 2 cut(s) 869, 1222
Bsu36I CCTNAGG 1 cut(s) 342
BsuRI GGCC 4 cut(s) 553, 789, 849, 1205
BtgI CCRYGG 1 cut(s) 548
BtsCI GGATG 3 cut(s) 1235, 1331, 1382
BtsI GCAGTG 1 cut(s) 229
BtsIMutI CAGTG 5 cut(s) 229, 406, 627, 958, 1132
Cac8I GCNNGC 5 cut(s) 6, 503, 670, 1207, 1233
CaiI CAGNNNCTG 2 cut(s) 233, 977
CciI TCATGA 1 cut(s) 421
CfoI GCGC 1 cut(s) 60
Cfr13I GGNCC 1 cut(s) 734
CseI GACGC 1 cut(s) 678
Csp6I GTAC 1 cut(s) 118
CspCI CAANNNNNGTGG 2 cut(s) 490, 525
CviAII CATG 8 cut(s) 121, 422, 617, 859, 1101, 1154, 1232, 1432
CviQI GTAC 1 cut(s) 118
DdeI CTNAG 8 cut(s) 132, 237, 315, 342, 673, 804, 1226, 1342
DpnI GATC 3 cut(s) 141, 871, 1224
DpnII GATC 3 cut(s) 139, 869, 1222
DraI TTTAAA 2 cut(s) 714, 760
EaeI YGGCCR 2 cut(s) 787, 847
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
Ecl136II GAGCTC 1 cut(s) 803
Eco24I GRGCYC 1 cut(s) 805
Eco32I GATATC 1 cut(s) 99
Eco47I GGWCC 1 cut(s) 734
Eco47III AGCGCT 1 cut(s) 59
Eco53kI GAGCTC 1 cut(s) 803
Eco57I CTGAAG 2 cut(s) 90, 875
Eco81I CCTNAGG 1 cut(s) 342
EcoICRI GAGCTC 1 cut(s) 803
EcoNI CCTNNNNNAGG 1 cut(s) 431
EcoO109I RGGNCCY 1 cut(s) 734
EcoRI GAATTC 2 cut(s) 824, 940
EcoRII CCWGG 4 cut(s) 958, 1240, 1292, 1321
EcoRV GATATC 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 1237
EcoT38I GRGCYC 1 cut(s) 805
FaeI CATG 8 cut(s) 124, 425, 620, 862, 1104, 1157, 1235, 1435
FalI AAGNNNNNCTT 2 cut(s) 758, 790
FaqI GGGAC 1 cut(s) 720
FatI CATG 8 cut(s) 120, 421, 616, 858, 1100, 1153, 1231, 1431
FauI CCCGC 1 cut(s) 24
FbaI TGATCA 1 cut(s) 139
FblI GTMKAC 3 cut(s) 182, 309, 335
Fnu4HI GCNGC 3 cut(s) 61, 1003, 1274
FokI GGATG 3 cut(s) 1222, 1338, 1369
FriOI GRGCYC 1 cut(s) 805
Fsp4HI GCNGC 3 cut(s) 61, 1003, 1274
FspBI CTAG 6 cut(s) 195, 459, 516, 911, 1038, 1113
GlaI GCGC 1 cut(s) 59
GluI GCNGC 3 cut(s) 61, 1003, 1274
GsuI CTGGAG 1 cut(s) 15
HaeII RGCGCY 1 cut(s) 61
HaeIII GGCC 4 cut(s) 553, 789, 849, 1205
HapII CCGG 1 cut(s) 83
HgaI GACGC 1 cut(s) 678
HhaI GCGC 1 cut(s) 60
Hin1II CATG 8 cut(s) 124, 425, 620, 862, 1104, 1157, 1235, 1435
Hin6I GCGC 1 cut(s) 58
HinP1I GCGC 1 cut(s) 58
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HindIII AAGCTT 3 cut(s) 260, 268, 503
HpaII CCGG 1 cut(s) 83
HphI GGTGA 1 cut(s) 1039
Hpy166II GTNNAC 4 cut(s) 183, 310, 336, 1189
Hpy188III TCNNGA 6 cut(s) 422, 867, 1062, 1091, 1166, 1358
Hpy8I GTNNAC 4 cut(s) 183, 310, 336, 1189
HpyAV CCTTC 2 cut(s) 212, 1383
HpyCH4III ACNGT 5 cut(s) 156, 471, 544, 1069, 1465
HpyCH4IV ACGT 2 cut(s) 992, 1354
HpyF10VI GCNNNNNNNGC 2 cut(s) 233, 980
HpyF3I CTNAG 8 cut(s) 132, 237, 315, 342, 673, 804, 1226, 1342
HpySE526I ACGT 2 cut(s) 992, 1354
Hsp92II CATG 8 cut(s) 124, 425, 620, 862, 1104, 1157, 1235, 1435
HspAI GCGC 1 cut(s) 58
KflI GGGWCCC 1 cut(s) 734
Ksp22I TGATCA 1 cut(s) 139
Kzo9I GATC 3 cut(s) 139, 869, 1222
LmnI GCTCC 3 cut(s) 512, 1111, 1316
Lsp1109I GCAGC 2 cut(s) 47, 1285
LweI GCATC 4 cut(s) 970, 1244, 1310, 1391
MaeI CTAG 6 cut(s) 195, 459, 516, 911, 1038, 1113
MaeII ACGT 2 cut(s) 992, 1354
MaeIII GTNAC 3 cut(s) 905, 953, 1132
MalI GATC 3 cut(s) 141, 871, 1224
MboI GATC 3 cut(s) 139, 869, 1222
MboII GAAGA 8 cut(s) 80, 93, 96, 150, 331, 599, 866, 1019
MfeI CAATTG 1 cut(s) 723
MflI RGATCY 2 cut(s) 869, 1222
MhlI GDGCHC 4 cut(s) 466, 805, 1108, 1321
MlsI TGGCCA 2 cut(s) 789, 849
MluNI TGGCCA 2 cut(s) 789, 849
MlyI GAGTC 4 cut(s) 239, 305, 1103, 1489
MmeI TCCRAC 3 cut(s) 502, 556, 910
MnlI CCTC 7 cut(s) 39, 141, 297, 315, 427, 1156, 1494
Mox20I TGGCCA 2 cut(s) 789, 849
Mph1103I ATGCAT 1 cut(s) 1237
MroXI GAANNNNTTC 1 cut(s) 564
MscI TGGCCA 2 cut(s) 789, 849
MseI TTAA 5 cut(s) 713, 759, 797, 1269, 1469
MslI CAYNNNNRTG 3 cut(s) 210, 401, 1324
Msp20I TGGCCA 2 cut(s) 789, 849
MspI CCGG 1 cut(s) 83
MspR9I CCNGG 4 cut(s) 960, 1242, 1294, 1323
MunI CAATTG 1 cut(s) 723
MvaI CCWGG 4 cut(s) 960, 1242, 1294, 1323
MwoI GCNNNNNNNGC 2 cut(s) 233, 980
NdeII GATC 3 cut(s) 139, 869, 1222
NlaIII CATG 8 cut(s) 124, 425, 620, 862, 1104, 1157, 1235, 1435
NlaIV GGNNCC 5 cut(s) 285, 613, 735, 736, 871
NmuCI GTSAC 1 cut(s) 953
NsiI ATGCAT 1 cut(s) 1237
NspI RCATGY 2 cut(s) 862, 1235
PaeI GCATGC 1 cut(s) 1235
PagI TCATGA 1 cut(s) 421
PdmI GAANNNNTTC 1 cut(s) 564
PfeI GAWTC 6 cut(s) 328, 476, 620, 1058, 1180, 1262
PkrI GCNGC 3 cut(s) 62, 1004, 1275
PleI GAGTC 4 cut(s) 238, 305, 1102, 1488
PpsI GAGTC 4 cut(s) 238, 305, 1102, 1488
Ppu21I YACGTR 1 cut(s) 993
PpuMI RGGWCCY 1 cut(s) 734
PshAI GACNNNNGTC 1 cut(s) 960
PsiI TTATAA 1 cut(s) 266
Psp124BI GAGCTC 1 cut(s) 805
Psp5II RGGWCCY 1 cut(s) 734
Psp6I CCWGG 4 cut(s) 958, 1240, 1292, 1321
PspGI CCWGG 4 cut(s) 958, 1240, 1292, 1321
PspN4I GGNNCC 5 cut(s) 285, 613, 735, 736, 871
PspPI GGNCC 1 cut(s) 734
PspPPI RGGWCCY 1 cut(s) 734
PstI CTGCAG 1 cut(s) 1179
PstNI CAGNNNCTG 2 cut(s) 233, 977
PsuI RGATCY 2 cut(s) 869, 1222
RsaI GTAC 1 cut(s) 119
RsaNI GTAC 1 cut(s) 118
RseI CAYNNNNRTG 3 cut(s) 210, 401, 1324
SacI GAGCTC 1 cut(s) 805
SalI GTCGAC 1 cut(s) 308
SaqAI TTAA 5 cut(s) 713, 759, 797, 1269, 1469
SatI GCNGC 3 cut(s) 61, 1003, 1274
Sau3AI GATC 3 cut(s) 139, 869, 1222
Sau96I GGNCC 1 cut(s) 734
SchI GAGTC 4 cut(s) 239, 305, 1103, 1489
ScrFI CCNGG 4 cut(s) 960, 1242, 1294, 1323
SduI GDGCHC 4 cut(s) 466, 805, 1108, 1321
SfaNI GCATC 4 cut(s) 970, 1244, 1310, 1391
SfcI CTRYAG 2 cut(s) 467, 1175
SinI GGWCC 1 cut(s) 734
SmiI ATTTAAAT 1 cut(s) 714
SmiMI CAYNNNNRTG 3 cut(s) 210, 401, 1324
SmlI CTYRAG 1 cut(s) 1089
SmoI CTYRAG 1 cut(s) 1089
SphI GCATGC 1 cut(s) 1235
SsiI CCGC 2 cut(s) 17, 1002
SspMI CTAG 6 cut(s) 195, 459, 516, 911, 1038, 1113
SstI GAGCTC 1 cut(s) 805
StyD4I CCNGG 4 cut(s) 958, 1240, 1292, 1321
SwaI ATTTAAAT 1 cut(s) 714
TaaI ACNGT 5 cut(s) 156, 471, 544, 1069, 1465
TaiI ACGT 2 cut(s) 995, 1357
TaqI TCGA 2 cut(s) 161, 309
TatI WGTACW 1 cut(s) 117
TauI GCSGC 1 cut(s) 1005
TfiI GAWTC 6 cut(s) 328, 476, 620, 1058, 1180, 1262
Tru1I TTAA 5 cut(s) 713, 759, 797, 1269, 1469
Tru9I TTAA 5 cut(s) 713, 759, 797, 1269, 1469
TscAI CASTG 5 cut(s) 229, 406, 634, 958, 1132
TseFI GTSAC 1 cut(s) 953
TseI GCWGC 2 cut(s) 60, 1273
Tsp45I GTSAC 1 cut(s) 953
TspRI CASTG 5 cut(s) 229, 406, 634, 958, 1132
VpaK11BI GGWCC 1 cut(s) 734
XagI CCTNNNNNAGG 1 cut(s) 431
XapI RAATTY 9 cut(s) 47, 189, 592, 709, 715, 793, 824, 883, 940
XceI RCATGY 2 cut(s) 862, 1235
XmiI GTMKAC 3 cut(s) 182, 309, 335
XmnI GAANNNNTTC 1 cut(s) 564
XspI CTAG 6 cut(s) 195, 459, 516, 911, 1038, 1113
Zsp2I ATGCAT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.