Rroxscaffold_3G00269670

C3HC zinc finger-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0008062
Physical Location & Seq
Reverse (-)
62469945 .. 62473827
3883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00269670.1

Sequence Viewer

Length: 2004 bp
ATGGCGAGAGATTCCGAGAAGAGGTTCAATTCCGTCATGGACAAGCTCTTCTACGCTCCCAAACCTTCGCCGACCTCCACTTCCAGTGTAGAAGCATCGAGAGGTAAAAAGCGAGCGCGTCCGTCTTCTGCGTTGGCGCTGGTGGAGCCGAAGTGGAGAGGTGTTAGAGAGCAGGGGTTTCGGCATTGCTCAGCTCCGGCTTCACCGTCTCAGCCTCCGGTGTGTAGGCCGTGGGACCGAGGGGATCTTATGAGGAGAGTAGCTACGTTCAAGTCCATGACTTGGTTTGCGAAGCCCAAGGTGGTAAGTGCTTTAAATTGTGCCAGGAGAGGTTGGGTCAACATAGATGTGGATACAATAGCCTGTGAGTCATGCGGGGCGCGCCTTCTGTTTTCTACTCCATCATCTTGGAATCAGCAGCAAGTTGAGAAGGCAGCTTTGGTATTTAGTTTAAAGCTAGACAATGGACATAAAATGCTTTGTCCATGGATTGACAATGCCTGTGATGAAATGCTGGCAGAGTTCCCGCCTACACCACCTCCAGTTTTAGTGGATAAATTTAGAGAGCGCTGCTCTGCGATTTTACAACTTCCAGTTCTTCCTGTGATATCTTCTTCAGCCATTAAGTACATGAAAAGCCCTCAGCTTGATCAATTTCTTGGACAGTCTTCGATATTTTTCGGCAATGGGTCTACTGAAATTTCTAGAATAGAGCACTCTGATGATGAAGGCAGTGCAGAGTCTGCTAAGTTGTATTATCAGGCACAGAAGCTTATAAGCTTATGCGGTTGGGAACCTCGCTCACTACCTTATATTGTCGACTCTGAGAAGAGGTTGAATCAGTCTACACTTAAGGCAAATGTTTTGAGTTCATCTCATTTAACTGCTAACAGCCAATATCCTATCATCAGTGTGCAATATGCCAGTAATCATGACCTAATTGAGGCAAATGAAACTTTCAGCAGTTCTAGTGCTCTACAGTCTGAATCCAATTCTGTGGTTTTAGATTGCAAGCTTTGTGGAGCTAGTGTAGGATTATGGGCTTTCACTACCGTTCCACGGCCTGTTGAATTATTCCAGTTAGTTGGATATGCAGAAGAAAATTCTGAAACTCATCTTGGAACCCATGATTCAAGCACTGAAAGTCATCTTGGCAATTGGACTGATGTGGTAAGTGCTGGCTCAGATGGTGCAACAGCGTCAAAGGATAGATTTTCAAATTTAAATTTGACAATTGCAGGGGGTCCCACACCAACAAAACAGAACTTCAAAGCAAAGATTTCCTTACCTGTTATTGGCCAGAATTTAAGAGCTCAGTTTTCATATAATTCTGAATTCAGAGAATGTTTATCTGTTAGCCGAGAAGACATGCAATCTGGATCCCAAAAAGAGAATTTGCTTCAGGGGGGAGAATGTTACCTAGAAAATGCAGAAAATGTTGGATTGGAGAATTCAGAAGTCAGTGACCCTGGTCATTCTACAGCCCCTGATGCCAATAACACATATAAAGGCGGTGAAGACAACAATAACTTGCTGGTGATGGCTTCTAGCAATGGAAATTTGTTAGATTCAGGAACAGTTGTGGAACACAGGCAGACTCAAGAGTCTCCATGTGCTCCATCTAGCTTGGAAGCCAGTGCAGTTGCCCATTGCACCTCAAACCATGAAGTTAGTCAAGAGAAACTGCAGATTCCTGTAAACAATGAACTTGTGGCCTGCAATACTGGGAAAGATCTAAGGCATGCATCCCCAGGTGGCACGATGGAGTTTGATTCTATTAAGCAGCATAGACATTTCTGCCCCTGGATTGCATCAACAGGTAATGGAGCACCTGGATGGAAACAAACACTCTCAGCTTTACAACGTCAAGATGGGTGTTCTCCTTCATCTGCATCCATAATCAAGGTTGATGACCCCATTACTTCAATAAGAAATCTTTTCATGTCTCCATCTCCGAAAAGAATGAAGCCCACAGTTTTAACAACTCGGAGTCCTCAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC

Protein Analysis

667

Amino Acids

72.84

Weight (kDa)

6.34

Isoelectric Point (pI)

57.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC PF07967 77 - 201 1.9e-34 NuBaID N-terminal domain (aka zf-C3HC)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 776
AasI GACNNNNNNGTC 1 cut(s) 1603
AccB7I CCANNNNNTGG 1 cut(s) 282
AccI GTMKAC 3 cut(s) 692, 819, 845
AccII CGCG 2 cut(s) 118, 382
AciI CCGC 4 cut(s) 375, 527, 786, 1512
AclWI GGATC 3 cut(s) 252, 1374, 1387
AcoI YGGCCR 1 cut(s) 1297
AcuI CTGAAG 2 cut(s) 600, 1385
AfaI GTAC 1 cut(s) 629
AfeI AGCGCT 1 cut(s) 569
AfiI CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
AflII CTTAAG 1 cut(s) 851
AgsI TTSAA 8 cut(s) 28, 271, 838, 1070, 1134, 1218, 1270, 1926
AjnI CCWGG 5 cut(s) 323, 1468, 1750, 1802, 1831
AjuI GAANNNNNNNTTGG 6 cut(s) 422, 454, 1101, 1133, 1134, 1166
Alw21I GWGCWC 5 cut(s) 717, 976, 1315, 1618, 1831
Alw26I GTCTC 3 cut(s) 213, 1611, 1950
AlwI GGATC 3 cut(s) 252, 1374, 1387
AlwNI CAGNNNCTG 2 cut(s) 743, 1487
Aor51HI AGCGCT 1 cut(s) 569
AoxI GGCC 4 cut(s) 227, 1061, 1297, 1713
ApeKI GCWGC 4 cut(s) 418, 434, 570, 1783
AscI GGCGCGCC 1 cut(s) 380
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 5 cut(s) 118, 139, 382, 384, 570
AspS9I GGNCC 2 cut(s) 235, 1244
AsuHPI GGTGA 3 cut(s) 195, 1526, 1549
AvaII GGWCC 2 cut(s) 235, 1244
BalI TGGCCA 1 cut(s) 1299
BamHI GGATCC 1 cut(s) 1379
BanII GRGCYC 1 cut(s) 1315
BbsI GAAGAC 4 cut(s) 117, 660, 1371, 1524
Bbv12I GWGCWC 5 cut(s) 717, 976, 1315, 1618, 1831
BbvCI CCTCAGC 1 cut(s) 642
BbvI GCAGC 4 cut(s) 430, 446, 557, 1795
BccI CCATC 8 cut(s) 409, 1181, 1534, 1627, 1756, 1830, 1865, 1957
BceAI ACGGC 2 cut(s) 214, 1076
BcgI CGANNNNNNTGC 2 cut(s) 161, 195
BciT130I CCWGG 5 cut(s) 325, 1470, 1752, 1804, 1833
BciVI GTATCC 1 cut(s) 346
BclI TGATCA 1 cut(s) 649
BcoDI GTCTC 3 cut(s) 213, 1611, 1950
BfaI CTAG 7 cut(s) 458, 705, 969, 1026, 1421, 1548, 1623
BfmI CTRYAG 3 cut(s) 977, 1479, 1685
BfoI RGCGCY 2 cut(s) 140, 571
BfrI CTTAAG 1 cut(s) 851
BfuI GTATCC 1 cut(s) 346
BglII AGATCT 1 cut(s) 1732
BisI GCNGC 4 cut(s) 419, 435, 571, 1784
BlpI GCTNAGC 1 cut(s) 190
BlsI GCNGC 4 cut(s) 420, 436, 572, 1785
Bme1390I CCNGG 5 cut(s) 325, 1470, 1752, 1804, 1833
Bme18I GGWCC 2 cut(s) 235, 1244
BmgT120I GGNCC 2 cut(s) 235, 1244
BmiI GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
BmrFI CCNGG 5 cut(s) 325, 1470, 1752, 1804, 1833
BmrI ACTGGG 1 cut(s) 1734
BmsI GCATC 5 cut(s) 104, 1480, 1754, 1820, 1901
BmuI ACTGGG 1 cut(s) 1734
BoxI GACNNNNGTC 1 cut(s) 1470
BpiI GAAGAC 4 cut(s) 117, 660, 1371, 1524
BplI GAGNNNNNCTC 4 cut(s) 557, 589, 859, 891
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 642
Bpu1102I GCTNAGC 1 cut(s) 190
BpuEI CTTGAG 1 cut(s) 1584
BsaJI CCNNGG 8 cut(s) 230, 238, 297, 485, 1058, 1468, 1750, 1802
BsaWI WCCGGW 1 cut(s) 217
BsaXI ACNNNNNCTCC 6 cut(s) 137, 167, 523, 553, 1014, 1044
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
Bse1I ACTGG 7 cut(s) 84, 542, 593, 924, 1078, 1635, 1729
Bse3DI GCAATG 4 cut(s) 184, 691, 1558, 1648
BseBI CCWGG 5 cut(s) 325, 1470, 1752, 1804, 1833
BseDI CCNNGG 8 cut(s) 230, 238, 297, 485, 1058, 1468, 1750, 1802
BseGI GGATG 3 cut(s) 1745, 1841, 1892
BseLI CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
BseMI GCAATG 4 cut(s) 184, 691, 1558, 1648
BseMII CTCAG 7 cut(s) 204, 224, 656, 816, 1197, 1328, 1866
BseNI ACTGG 7 cut(s) 84, 542, 593, 924, 1078, 1635, 1729
BsePI GCGCGC 1 cut(s) 380
BseRI GAGGAG 1 cut(s) 268
BseXI GCAGC 4 cut(s) 430, 446, 557, 1795
BsgI GTGCAG 2 cut(s) 756, 1659
Bsh1236I CGCG 2 cut(s) 118, 382
BshFI GGCC 4 cut(s) 229, 1063, 1299, 1715
BsiHKAI GWGCWC 5 cut(s) 717, 976, 1315, 1618, 1831
BsiSI CCGG 2 cut(s) 197, 218
BslFI GGGAC 2 cut(s) 248, 1230
BslI CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
BsmAI GTCTC 3 cut(s) 213, 1611, 1950
BsmBI CGTCTC 1 cut(s) 213
BsmFI GGGAC 2 cut(s) 248, 1230
BsnI GGCC 4 cut(s) 229, 1063, 1299, 1715
Bsp1286I GDGCHC 5 cut(s) 717, 976, 1315, 1618, 1831
Bsp143I GATC 4 cut(s) 244, 649, 1379, 1732
Bsp1720I GCTNAGC 1 cut(s) 190
Bsp19I CCATGG 1 cut(s) 485
BspACI CCGC 4 cut(s) 375, 527, 786, 1512
BspANI GGCC 4 cut(s) 229, 1063, 1299, 1715
BspCNI CTCAG 7 cut(s) 203, 223, 655, 817, 1196, 1327, 1865
BspFNI CGCG 2 cut(s) 118, 382
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
BspMAI CTGCAG 1 cut(s) 1689
BspPI GGATC 3 cut(s) 252, 1374, 1387
BspQI GCTCTTC 1 cut(s) 53
BspTI CTTAAG 1 cut(s) 851
BsrDI GCAATG 4 cut(s) 184, 691, 1558, 1648
BsrI ACTGG 7 cut(s) 84, 542, 593, 924, 1078, 1635, 1729
BssECI CCNNGG 8 cut(s) 230, 238, 297, 485, 1058, 1468, 1750, 1802
BssHII GCGCGC 1 cut(s) 380
BssMI GATC 4 cut(s) 244, 649, 1379, 1732
BssT1I CCWWGG 2 cut(s) 297, 485
Bst2UI CCWGG 5 cut(s) 325, 1470, 1752, 1804, 1833
Bst4CI ACNGT 6 cut(s) 207, 666, 981, 1054, 1579, 1975
Bst6I CTCTTC 3 cut(s) 14, 53, 824
BstAFI CTTAAG 1 cut(s) 851
BstAPI GCANNNNNTGC 1 cut(s) 743
BstC8I GCNNGC 7 cut(s) 114, 382, 516, 1013, 1180, 1717, 1743
BstDEI CTNAG 9 cut(s) 190, 210, 642, 747, 825, 1183, 1314, 1736, 1852
BstDSI CCRYGG 3 cut(s) 230, 485, 1058
BstENI CCTNNNNNAGG 1 cut(s) 941
BstF5I GGATG 3 cut(s) 1745, 1841, 1892
BstFNI CGCG 2 cut(s) 118, 382
BstH2I RGCGCY 2 cut(s) 140, 571
BstHHI GCGC 5 cut(s) 118, 139, 382, 384, 570
BstKTI GATC 4 cut(s) 247, 652, 1382, 1735
BstMAI GTCTC 3 cut(s) 213, 1611, 1950
BstMBI GATC 4 cut(s) 244, 649, 1379, 1732
BstMWI GCNNNNNNNGC 4 cut(s) 145, 381, 743, 1490
BstNI CCWGG 5 cut(s) 325, 1470, 1752, 1804, 1833
BstNSI RCATGY 2 cut(s) 1372, 1745
BstPAI GACNNNNGTC 1 cut(s) 1470
BstSCI CCNGG 5 cut(s) 323, 1468, 1750, 1802, 1831
BstSFI CTRYAG 3 cut(s) 977, 1479, 1685
BstUI CGCG 2 cut(s) 118, 382
BstV1I GCAGC 4 cut(s) 430, 446, 557, 1795
BstV2I GAAGAC 4 cut(s) 117, 660, 1371, 1524
BstX2I RGATCY 3 cut(s) 244, 1379, 1732
BstXI CCANNNNNNTGG 3 cut(s) 408, 997, 1085
BstYI RGATCY 3 cut(s) 244, 1379, 1732
BsuI GTATCC 1 cut(s) 346
BsuRI GGCC 4 cut(s) 229, 1063, 1299, 1715
BtgI CCRYGG 3 cut(s) 230, 485, 1058
BtsCI GGATG 3 cut(s) 1745, 1841, 1892
BtsI GCAGTG 1 cut(s) 739
BtsIMutI CAGTG 6 cut(s) 91, 739, 916, 1137, 1468, 1642
Cac8I GCNNGC 7 cut(s) 114, 382, 516, 1013, 1180, 1717, 1743
CaiI CAGNNNCTG 2 cut(s) 743, 1487
CciI TCATGA 1 cut(s) 931
CfoI GCGC 5 cut(s) 118, 139, 382, 384, 570
Cfr13I GGNCC 2 cut(s) 235, 1244
CseI GACGC 2 cut(s) 107, 1188
Csp6I GTAC 1 cut(s) 628
CspCI CAANNNNNGTGG 2 cut(s) 1000, 1035
CviQI GTAC 1 cut(s) 628
DdeI CTNAG 9 cut(s) 190, 210, 642, 747, 825, 1183, 1314, 1736, 1852
DpnI GATC 4 cut(s) 246, 651, 1381, 1734
DpnII GATC 4 cut(s) 244, 649, 1379, 1732
DraI TTTAAA 3 cut(s) 315, 453, 1224
DrdI GACNNNNNNGTC 1 cut(s) 1603
DseDI GACNNNNNNGTC 1 cut(s) 1603
EaeI YGGCCR 1 cut(s) 1297
Eam1104I CTCTTC 3 cut(s) 14, 53, 824
EarI CTCTTC 3 cut(s) 14, 53, 824
Ecl136II GAGCTC 1 cut(s) 1313
Eco130I CCWWGG 2 cut(s) 297, 485
Eco24I GRGCYC 1 cut(s) 1315
Eco32I GATATC 1 cut(s) 609
Eco47I GGWCC 2 cut(s) 235, 1244
Eco47III AGCGCT 1 cut(s) 569
Eco53kI GAGCTC 1 cut(s) 1313
Eco57I CTGAAG 2 cut(s) 600, 1385
EcoICRI GAGCTC 1 cut(s) 1313
EcoNI CCTNNNNNAGG 1 cut(s) 941
EcoO109I RGGNCCY 1 cut(s) 1244
EcoRI GAATTC 2 cut(s) 1334, 1450
EcoRII CCWGG 5 cut(s) 323, 1468, 1750, 1802, 1831
EcoRV GATATC 1 cut(s) 609
EcoT14I CCWWGG 2 cut(s) 297, 485
EcoT22I ATGCAT 1 cut(s) 1747
EcoT38I GRGCYC 1 cut(s) 1315
ErhI CCWWGG 2 cut(s) 297, 485
Esp3I CGTCTC 1 cut(s) 213
FalI AAGNNNNNCTT 2 cut(s) 1268, 1300
FaqI GGGAC 2 cut(s) 248, 1230
FauI CCCGC 2 cut(s) 368, 534
FbaI TGATCA 1 cut(s) 649
FblI GTMKAC 3 cut(s) 692, 819, 845
Fnu4HI GCNGC 4 cut(s) 419, 435, 571, 1784
FokI GGATG 3 cut(s) 1732, 1848, 1879
FriOI GRGCYC 1 cut(s) 1315
Fsp4HI GCNGC 4 cut(s) 419, 435, 571, 1784
FspBI CTAG 7 cut(s) 458, 705, 969, 1026, 1421, 1548, 1623
GlaI GCGC 5 cut(s) 117, 138, 381, 383, 569
GluI GCNGC 4 cut(s) 419, 435, 571, 1784
GsuI CTGGAG 1 cut(s) 525
HaeII RGCGCY 2 cut(s) 140, 571
HaeIII GGCC 4 cut(s) 229, 1063, 1299, 1715
HapII CCGG 2 cut(s) 197, 218
HgaI GACGC 2 cut(s) 107, 1188
HhaI GCGC 5 cut(s) 118, 139, 382, 384, 570
Hin6I GCGC 5 cut(s) 116, 137, 380, 382, 568
HinP1I GCGC 5 cut(s) 116, 137, 380, 382, 568
HincII GTYRAC 2 cut(s) 340, 820
HindII GTYRAC 2 cut(s) 340, 820
HindIII AAGCTT 3 cut(s) 770, 778, 1013
HpaII CCGG 2 cut(s) 197, 218
HphI GGTGA 3 cut(s) 195, 1526, 1549
Hpy166II GTNNAC 5 cut(s) 340, 693, 820, 846, 1699
Hpy188III TCNNGA 8 cut(s) 99, 705, 932, 1377, 1572, 1601, 1676, 1868
Hpy8I GTNNAC 5 cut(s) 340, 693, 820, 846, 1699
HpyAV CCTTC 5 cut(s) 75, 395, 424, 722, 1893
HpyCH4III ACNGT 6 cut(s) 207, 666, 981, 1054, 1579, 1975
HpyCH4IV ACGT 2 cut(s) 266, 1864
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 381, 743, 1490
HpyF3I CTNAG 9 cut(s) 190, 210, 642, 747, 825, 1183, 1314, 1736, 1852
HpySE526I ACGT 2 cut(s) 266, 1864
HspAI GCGC 5 cut(s) 116, 137, 380, 382, 568
KflI GGGWCCC 1 cut(s) 1244
Ksp22I TGATCA 1 cut(s) 649
Kzo9I GATC 4 cut(s) 244, 649, 1379, 1732
LguI GCTCTTC 1 cut(s) 53
LmnI GCTCC 6 cut(s) 61, 145, 199, 1022, 1621, 1826
Lsp1109I GCAGC 4 cut(s) 430, 446, 557, 1795
LweI GCATC 5 cut(s) 104, 1480, 1754, 1820, 1901
MaeI CTAG 7 cut(s) 458, 705, 969, 1026, 1421, 1548, 1623
MaeII ACGT 2 cut(s) 266, 1864
MaeIII GTNAC 2 cut(s) 1415, 1463
MalI GATC 4 cut(s) 246, 651, 1381, 1734
MboI GATC 4 cut(s) 244, 649, 1379, 1732
MfeI CAATTG 2 cut(s) 1156, 1233
MflI RGATCY 3 cut(s) 244, 1379, 1732
MhlI GDGCHC 5 cut(s) 717, 976, 1315, 1618, 1831
MlsI TGGCCA 1 cut(s) 1299
MluNI TGGCCA 1 cut(s) 1299
MlyI GAGTC 6 cut(s) 377, 749, 815, 1591, 1613, 1999
MmeI TCCRAC 2 cut(s) 1066, 1420
Mox20I TGGCCA 1 cut(s) 1299
Mph1103I ATGCAT 1 cut(s) 1747
MroXI GAANNNNTTC 1 cut(s) 23
MscI TGGCCA 1 cut(s) 1299
MseI TTAA 9 cut(s) 314, 452, 624, 852, 881, 1223, 1307, 1779, 1979
MslI CAYNNNNRTG 4 cut(s) 347, 720, 911, 1834
Msp20I TGGCCA 1 cut(s) 1299
MspCI CTTAAG 1 cut(s) 851
MspI CCGG 2 cut(s) 197, 218
MspR9I CCNGG 5 cut(s) 325, 1470, 1752, 1804, 1833
MunI CAATTG 2 cut(s) 1156, 1233
MvaI CCWGG 5 cut(s) 325, 1470, 1752, 1804, 1833
MvnI CGCG 2 cut(s) 118, 382
MwoI GCNNNNNNNGC 4 cut(s) 145, 381, 743, 1490
NcoI CCATGG 1 cut(s) 485
NdeII GATC 4 cut(s) 244, 649, 1379, 1732
NlaIV GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
NmeAIII GCCGAG 1 cut(s) 1385
NmuCI GTSAC 1 cut(s) 1463
NsiI ATGCAT 1 cut(s) 1747
NspI RCATGY 2 cut(s) 1372, 1745
PaeI GCATGC 1 cut(s) 1745
PagI TCATGA 1 cut(s) 931
PalAI GGCGCGCC 1 cut(s) 380
PauI GCGCGC 1 cut(s) 380
PciSI GCTCTTC 1 cut(s) 53
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 8 cut(s) 11, 412, 838, 986, 1130, 1568, 1690, 1772
PflMI CCANNNNNTGG 1 cut(s) 282
PkrI GCNGC 4 cut(s) 420, 436, 572, 1785
PleI GAGTC 6 cut(s) 376, 748, 815, 1591, 1612, 1998
PpsI GAGTC 6 cut(s) 376, 748, 815, 1591, 1612, 1998
PpuMI RGGWCCY 1 cut(s) 1244
PshAI GACNNNNGTC 1 cut(s) 1470
PsiI TTATAA 1 cut(s) 776
Psp124BI GAGCTC 1 cut(s) 1315
Psp5II RGGWCCY 1 cut(s) 1244
Psp6I CCWGG 5 cut(s) 323, 1468, 1750, 1802, 1831
PspGI CCWGG 5 cut(s) 323, 1468, 1750, 1802, 1831
PspN4I GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
PspPI GGNCC 2 cut(s) 235, 1244
PspPPI RGGWCCY 1 cut(s) 1244
PstI CTGCAG 1 cut(s) 1689
PstNI CAGNNNCTG 2 cut(s) 743, 1487
PsuI RGATCY 3 cut(s) 244, 1379, 1732
PteI GCGCGC 1 cut(s) 380
RsaI GTAC 1 cut(s) 629
RsaNI GTAC 1 cut(s) 628
RseI CAYNNNNRTG 4 cut(s) 347, 720, 911, 1834
SacI GAGCTC 1 cut(s) 1315
SalI GTCGAC 1 cut(s) 818
SapI GCTCTTC 1 cut(s) 53
SaqAI TTAA 9 cut(s) 314, 452, 624, 852, 881, 1223, 1307, 1779, 1979
SatI GCNGC 4 cut(s) 419, 435, 571, 1784
Sau3AI GATC 4 cut(s) 244, 649, 1379, 1732
Sau96I GGNCC 2 cut(s) 235, 1244
SchI GAGTC 6 cut(s) 377, 749, 815, 1591, 1613, 1999
ScrFI CCNGG 5 cut(s) 325, 1470, 1752, 1804, 1833
SduI GDGCHC 5 cut(s) 717, 976, 1315, 1618, 1831
SfaNI GCATC 5 cut(s) 104, 1480, 1754, 1820, 1901
SfcI CTRYAG 3 cut(s) 977, 1479, 1685
SgsI GGCGCGCC 1 cut(s) 380
SinI GGWCC 2 cut(s) 235, 1244
SmiI ATTTAAAT 1 cut(s) 1224
SmiMI CAYNNNNRTG 4 cut(s) 347, 720, 911, 1834
SmlI CTYRAG 2 cut(s) 851, 1599
SmoI CTYRAG 2 cut(s) 851, 1599
SphI GCATGC 1 cut(s) 1745
SsiI CCGC 4 cut(s) 375, 527, 786, 1512
SspMI CTAG 7 cut(s) 458, 705, 969, 1026, 1421, 1548, 1623
SstI GAGCTC 1 cut(s) 1315
StyD4I CCNGG 5 cut(s) 323, 1468, 1750, 1802, 1831
StyI CCWWGG 2 cut(s) 297, 485
SwaI ATTTAAAT 1 cut(s) 1224
TaaI ACNGT 6 cut(s) 207, 666, 981, 1054, 1579, 1975
TaiI ACGT 2 cut(s) 269, 1867
TaqI TCGA 3 cut(s) 98, 671, 819
TaqII GACCGA 1 cut(s) 252
TatI WGTACW 1 cut(s) 627
TfiI GAWTC 8 cut(s) 11, 412, 838, 986, 1130, 1568, 1690, 1772
Tru1I TTAA 9 cut(s) 314, 452, 624, 852, 881, 1223, 1307, 1779, 1979
Tru9I TTAA 9 cut(s) 314, 452, 624, 852, 881, 1223, 1307, 1779, 1979
TscAI CASTG 6 cut(s) 91, 739, 916, 1144, 1468, 1642
TseFI GTSAC 1 cut(s) 1463
TseI GCWGC 4 cut(s) 418, 434, 570, 1783
Tsp45I GTSAC 1 cut(s) 1463
TspGWI ACGGA 2 cut(s) 22, 111
TspRI CASTG 6 cut(s) 91, 739, 916, 1144, 1468, 1642
Van91I CCANNNNNTGG 1 cut(s) 282
Vha464I CTTAAG 1 cut(s) 851
VpaK11BI GGWCC 2 cut(s) 235, 1244
XagI CCTNNNNNAGG 1 cut(s) 941
XbaI TCTAGA 1 cut(s) 704
XceI RCATGY 2 cut(s) 1372, 1745
XmiI GTMKAC 3 cut(s) 692, 819, 845
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 7 cut(s) 458, 705, 969, 1026, 1421, 1548, 1623
Zsp2I ATGCAT 1 cut(s) 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.