MD14G1220400.v1.1

C3HC zinc finger-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0008062
Physical Location & Seq
Forward (+)
30243785 .. 30247352
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1220400.v1.1.491

Sequence Viewer

Length: 1968 bp
ATGTCGAAAGATTCAGAGAAAAAGTTCCACTCGATCATGGACAAGCTATTTTTCGCTCCCAAATCTGCGCCTAGCTCCGATTCCAGTTCATCTGGTGTACAAACTTCGAGAGGCAAAAAGCGAGCAAATCCCTCATCCGCATTGGCACTAGTAGAACCGAAATCGAGAGGCGATAGAATGGGGGTCTCCCGGCATTTTTCAGCTCCGGCTGTGGCGGCTCATGCTCCGCTGTGTAGGCCGTGGGACCGTGGGGATCTTATGAGGAGGGTAGCTACATTCAAGTCCATGACTTGGTTTGCCAAGCCTAAGGTGGTGAGTGCTTTAAATTGTGCCAGAAGAGGCTGGATCAACGTGGATGCAGATATATTAGTGTGTGAATCGTGCGGGGCACGCCTCTTATTTTCTACTCCTTCGTCTTGGAATCAGCAGCAAGTTGAGAAGGCAGCTTTGGTGTTTAGTTTAAGGCTCGACAATGGGCATAAGATACTCTGTCCATGGATTGACAACGCATGTGATGAAACACTGGCAGAGTTTCCACCTATGCCACCTCCAGTTTTAGTTGATAAGTTTAGAGAACGCTGCTATGCTCTTTTAGAACTCTCAGTTCTCCCTGTGATTTCTTCTTCAGCCATTGAGTACATGAAGAGCCCTCAGCTAGAGCAATTTCTTGGACAGTCTTCAATGTTTTATGGCAATGGGTCTGGAGACATTTCTAGAACAGAACATTCTGTCAATGAAGACAGTGCAGATTCTGCCAAGTTATATTATCAGGCACAAAAGCTCATAAGTTTATGCGGCTGGGAACCTCGTTTACTACCTTATGTTGTTGACTCTGAGAACAGACAGAATTATTCAGCTACCAACAGACAGAATCTGGGCATCAATGTGCACTCTGCTAGTAATGATGAACTTATGAAGTCACACAATACCAGTATACAGTCTGAACACAATTCTGTTGTTTTAGACTGCAAGCTTTGTGGAGCCAGTGTTGGATTATGGGCATTCTCTACCGTTCCACGGCCTGTGGAATGTTTCAGATTAGTTGGATTTGCAGAAGTAAACTCTGAAAGTCGTTCTGGAACCCATGATTCAAACACTGAAAGTCACTGCGACAGTAGGATAGATATTTTAAATGCTGGCGTAGATGGTGCAACATTGTCAAAGGACAGATTCTCAAATTTAAATTTGACAATTGCAGGGGGTCCTCCACCTACAAATCAGAATTTCAAAGCAAAAATCTTGTTGCCTGTTATTGGTCGGAATTTAAGGGCTCGGATTTCATATGATACTGAATTGAGAGATTGTTTGTCTGTTGGCCAGGAAGGTATGCAATCTGATTCCCAGATGGAGAAAGAGGAAGATCACTACCGAGAAAATGCAGGGCATGGTGGACTGGAGAATTCAGAAGTGAGTGGCCCTGGAACCCCTGATGCGGACATCACACATTTAAATGGTGAAATCGACAAAAGTGACTCACTTGTGATGGTTTCTAGCAAGGGAGACTTGTTACATTCAGGAACCATTGTAGAGCACAGCGAAGAACATGAGTCTCCTAGTGTTCCATCTAGCTTTGAAGCCAATGCAGATCTTAGCAGCTCCAGAAATGATCCCCAACCCACCTCAAACCAGGAGGCTAGTGAAGGCATAGTGCAGATTCCTGCAAACAATGAACTTGTGGCCTGCAGTAGTGGGAAGGACCTAAAGCATGTAGTGCCTGATGGCAGGATGGAGTTTGATCCTATCAGGCAGCACAGATATTTCTGCCCTTGGATTGCATCAACGGTTAATGGGGCACCTGGATGGAAGCAAACACTATCTGCATTACAACGTCAGGAAGGTGGCTCTCCTTCATCCACATCCATAATTAAGGTTGATGACCCTATCACTTCAATTAGAAATCTCTTCATGTCTCCATCTCCGAAAAGAATGAAGCCAACTGTTTTAACAACTCGAAGTTCGGATCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC

Protein Analysis

656

Amino Acids

71.73

Weight (kDa)

5.94

Isoelectric Point (pI)

52.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC PF07967 80 - 204 3.2e-34 NuBaID N-terminal domain (aka zf-C3HC)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1792
AccB7I CCANNNNNTGG 1 cut(s) 291
AccI GTMKAC 1 cut(s) 934
AciI CCGC 6 cut(s) 138, 215, 227, 384, 795, 1433
AclWI GGATC 4 cut(s) 261, 353, 1601, 1730
AcoI YGGCCR 1 cut(s) 1315
AcsI RAATTY 5 cut(s) 1177, 1183, 1222, 1261, 1399
AcuI CTGAAG 1 cut(s) 609
AfaI GTAC 2 cut(s) 99, 638
AfiI CCNNNNNNNGG 4 cut(s) 291, 1017, 1253, 1432
AgsI TTSAA 6 cut(s) 280, 681, 1092, 1228, 1574, 1890
AhlI ACTAGT 1 cut(s) 148
AjnI CCWGG 4 cut(s) 1317, 1417, 1626, 1795
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
Alw21I GWGCWC 2 cut(s) 891, 1533
Alw26I GTCTC 5 cut(s) 190, 699, 1494, 1554, 1914
Alw44I GTGCAC 1 cut(s) 887
AlwI GGATC 4 cut(s) 261, 353, 1601, 1730
AlwNI CAGNNNCTG 2 cut(s) 752, 874
AoxI GGCC 5 cut(s) 236, 1019, 1315, 1414, 1677
ApaLI GTGCAC 1 cut(s) 887
ApeKI GCWGC 5 cut(s) 427, 443, 579, 1593, 1747
ApoI RAATTY 5 cut(s) 1177, 1183, 1222, 1261, 1399
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 4 cut(s) 244, 1202, 1415, 1696
AsuC2I CCSGG 1 cut(s) 190
AsuHPI GGTGA 2 cut(s) 325, 1466
AvaII GGWCC 3 cut(s) 244, 1202, 1696
AxyI CCTNAGG 1 cut(s) 306
BaeGI GKGCMC 3 cut(s) 391, 891, 1795
BalI TGGCCA 1 cut(s) 1317
BanI GGYRCC 1 cut(s) 1792
BanII GRGCYC 2 cut(s) 650, 1273
BbsI GAAGAC 2 cut(s) 669, 744
Bbv12I GWGCWC 2 cut(s) 891, 1533
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 5 cut(s) 439, 455, 566, 1605, 1759
BccI CCATC 8 cut(s) 1139, 1339, 1477, 1570, 1712, 1720, 1794, 1921
BceAI ACGGC 2 cut(s) 223, 1034
BciT130I CCWGG 4 cut(s) 1319, 1419, 1628, 1797
BcnI CCSGG 1 cut(s) 190
BcoDI GTCTC 5 cut(s) 190, 699, 1494, 1554, 1914
BcuI ACTAGT 1 cut(s) 148
BfaI CTAG 9 cut(s) 72, 149, 656, 714, 897, 1491, 1554, 1566, 1635
BfmI CTRYAG 1 cut(s) 1681
BglII AGATCT 1 cut(s) 1585
BisI GCNGC 7 cut(s) 216, 428, 444, 580, 796, 1594, 1748
BlsI GCNGC 7 cut(s) 217, 429, 445, 581, 797, 1595, 1749
Bme1390I CCNGG 5 cut(s) 190, 1319, 1419, 1628, 1797
Bme18I GGWCC 3 cut(s) 244, 1202, 1696
BmgT120I GGNCC 4 cut(s) 244, 1202, 1415, 1696
BmiI GGNNCC 8 cut(s) 245, 804, 982, 1081, 1203, 1423, 1519, 1794
BmrFI CCNGG 5 cut(s) 190, 1319, 1419, 1628, 1797
BmsI GCATC 4 cut(s) 346, 888, 1420, 1784
BpiI GAAGAC 2 cut(s) 669, 744
BpmI CTGGAG 4 cut(s) 534, 723, 1415, 1582
Bpu10I CCTNAGC 1 cut(s) 651
BpuMI CCSGG 1 cut(s) 190
BsaI GGTCTC 1 cut(s) 190
BsaJI CCNNGG 6 cut(s) 239, 247, 494, 1016, 1417, 1766
BsaXI ACNNNNNCTCC 2 cut(s) 972, 1002
Bsc4I CCNNNNNNNGG 4 cut(s) 291, 1017, 1253, 1432
Bse1I ACTGG 6 cut(s) 84, 528, 551, 930, 984, 1398
Bse21I CCTNAGG 1 cut(s) 306
Bse3DI GCAATG 1 cut(s) 700
BseBI CCWGG 4 cut(s) 1319, 1419, 1628, 1797
BseDI CCNNGG 6 cut(s) 239, 247, 494, 1016, 1417, 1766
BseGI GGATG 6 cut(s) 134, 361, 1731, 1805, 1850, 1856
BseLI CCNNNNNNNGG 4 cut(s) 291, 1017, 1253, 1432
BseMI GCAATG 1 cut(s) 700
BseMII CTCAG 3 cut(s) 615, 665, 825
BseNI ACTGG 6 cut(s) 84, 528, 551, 930, 984, 1398
BseRI GAGGAG 1 cut(s) 277
BseSI GKGCMC 3 cut(s) 391, 891, 1795
BseXI GCAGC 5 cut(s) 439, 455, 566, 1605, 1759
BseYI CCCAGC 1 cut(s) 798
BsgI GTGCAG 2 cut(s) 765, 1670
BshFI GGCC 5 cut(s) 238, 1021, 1317, 1416, 1679
BshNI GGYRCC 1 cut(s) 1792
BsiHKAI GWGCWC 2 cut(s) 891, 1533
BsiSI CCGG 2 cut(s) 190, 206
BslFI GGGAC 1 cut(s) 257
BslI CCNNNNNNNGG 4 cut(s) 291, 1017, 1253, 1432
BsmAI GTCTC 5 cut(s) 190, 699, 1494, 1554, 1914
BsmFI GGGAC 1 cut(s) 257
BsmI GAATGC 1 cut(s) 1001
BsnI GGCC 5 cut(s) 238, 1021, 1317, 1416, 1679
Bso31I GGTCTC 1 cut(s) 190
Bsp1286I GDGCHC 6 cut(s) 391, 650, 891, 1273, 1533, 1795
Bsp1407I TGTACA 1 cut(s) 97
Bsp143I GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
Bsp19I CCATGG 1 cut(s) 494
BspACI CCGC 6 cut(s) 138, 215, 227, 384, 795, 1433
BspANI GGCC 5 cut(s) 238, 1021, 1317, 1416, 1679
BspCNI CTCAG 3 cut(s) 614, 664, 826
BspLI GGNNCC 8 cut(s) 245, 804, 982, 1081, 1203, 1423, 1519, 1794
BspMAI CTGCAG 1 cut(s) 1685
BspPI GGATC 4 cut(s) 261, 353, 1601, 1730
BspQI GCTCTTC 1 cut(s) 638
BspT107I GGYRCC 1 cut(s) 1792
BspTNI GGTCTC 1 cut(s) 190
BsrDI GCAATG 1 cut(s) 700
BsrGI TGTACA 1 cut(s) 97
BsrI ACTGG 6 cut(s) 84, 528, 551, 930, 984, 1398
BssECI CCNNGG 6 cut(s) 239, 247, 494, 1016, 1417, 1766
BssMI GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
BssNAI GTATAC 1 cut(s) 935
BssT1I CCWWGG 2 cut(s) 494, 1766
Bst1107I GTATAC 1 cut(s) 935
Bst2UI CCWGG 4 cut(s) 1319, 1419, 1628, 1797
Bst4CI ACNGT 8 cut(s) 248, 675, 743, 939, 1012, 1115, 1783, 1939
Bst6I CTCTTC 3 cut(s) 331, 638, 1907
BstAPI GCANNNNNTGC 2 cut(s) 752, 1711
BstAUI TGTACA 1 cut(s) 97
BstC8I GCNNGC 5 cut(s) 123, 391, 971, 1138, 1681
BstDEI CTNAG 5 cut(s) 306, 601, 651, 834, 1589
BstDSI CCRYGG 4 cut(s) 239, 247, 494, 1016
BstF5I GGATG 6 cut(s) 134, 361, 1731, 1805, 1850, 1856
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 8 cut(s) 36, 256, 348, 1363, 1588, 1609, 1738, 1963
BstMAI GTCTC 5 cut(s) 190, 699, 1494, 1554, 1914
BstMBI GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
BstMWI GCNNNNNNNGC 6 cut(s) 215, 221, 235, 390, 752, 1711
BstNI CCWGG 4 cut(s) 1319, 1419, 1628, 1797
BstNSI RCATGY 2 cut(s) 513, 1709
BstSCI CCNGG 5 cut(s) 188, 1317, 1417, 1626, 1795
BstSFI CTRYAG 1 cut(s) 1681
BstSLI GKGCMC 3 cut(s) 391, 891, 1795
BstV1I GCAGC 5 cut(s) 439, 455, 566, 1605, 1759
BstV2I GAAGAC 2 cut(s) 669, 744
BstX2I RGATCY 2 cut(s) 253, 1585
BstYI RGATCY 2 cut(s) 253, 1585
BstZ17I GTATAC 1 cut(s) 935
Bsu36I CCTNAGG 1 cut(s) 306
BsuRI GGCC 5 cut(s) 238, 1021, 1317, 1416, 1679
BtgI CCRYGG 4 cut(s) 239, 247, 494, 1016
BtsCI GGATG 6 cut(s) 134, 361, 1731, 1805, 1850, 1856
BtsI GCAGTG 1 cut(s) 1105
BtsIMutI CAGTG 5 cut(s) 521, 748, 991, 1095, 1105
Cac8I GCNNGC 5 cut(s) 123, 391, 971, 1138, 1681
CaiI CAGNNNCTG 2 cut(s) 752, 874
CfoI GCGC 1 cut(s) 70
Cfr13I GGNCC 4 cut(s) 244, 1202, 1415, 1696
Csp6I GTAC 2 cut(s) 98, 637
CspCI CAANNNNNGTGG 2 cut(s) 958, 993
CviQI GTAC 2 cut(s) 98, 637
DdeI CTNAG 5 cut(s) 306, 601, 651, 834, 1589
DpnI GATC 8 cut(s) 35, 255, 347, 1362, 1587, 1608, 1737, 1962
DpnII GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
DraI TTTAAA 4 cut(s) 324, 1131, 1182, 1449
EaeI YGGCCR 1 cut(s) 1315
Eam1104I CTCTTC 3 cut(s) 331, 638, 1907
EarI CTCTTC 3 cut(s) 331, 638, 1907
Eco130I CCWWGG 2 cut(s) 494, 1766
Eco24I GRGCYC 2 cut(s) 650, 1273
Eco31I GGTCTC 1 cut(s) 190
Eco47I GGWCC 3 cut(s) 244, 1202, 1696
Eco57I CTGAAG 1 cut(s) 609
Eco81I CCTNAGG 1 cut(s) 306
EcoO109I RGGNCCY 2 cut(s) 1202, 1696
EcoRI GAATTC 1 cut(s) 1399
EcoRII CCWGG 4 cut(s) 1317, 1417, 1626, 1795
EcoT14I CCWWGG 2 cut(s) 494, 1766
EcoT38I GRGCYC 2 cut(s) 650, 1273
ErhI CCWWGG 2 cut(s) 494, 1766
FalI AAGNNNNNCTT 2 cut(s) 1487, 1519
FaqI GGGAC 1 cut(s) 257
FauI CCCGC 1 cut(s) 377
FauNDI CATATG 1 cut(s) 1282
FblI GTMKAC 1 cut(s) 934
Fnu4HI GCNGC 7 cut(s) 216, 428, 444, 580, 796, 1594, 1748
FokI GGATG 6 cut(s) 121, 368, 1738, 1812, 1837, 1843
FriOI GRGCYC 2 cut(s) 650, 1273
Fsp4HI GCNGC 7 cut(s) 216, 428, 444, 580, 796, 1594, 1748
FspBI CTAG 9 cut(s) 72, 149, 656, 714, 897, 1491, 1554, 1566, 1635
GlaI GCGC 1 cut(s) 69
GluI GCNGC 7 cut(s) 216, 428, 444, 580, 796, 1594, 1748
GsaI CCCAGC 1 cut(s) 802
GsuI CTGGAG 4 cut(s) 534, 723, 1415, 1582
HaeIII GGCC 5 cut(s) 238, 1021, 1317, 1416, 1679
HapII CCGG 2 cut(s) 190, 206
HhaI GCGC 1 cut(s) 70
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HincII GTYRAC 1 cut(s) 829
HindII GTYRAC 1 cut(s) 829
HindIII AAGCTT 1 cut(s) 971
HpaII CCGG 2 cut(s) 190, 206
HphI GGTGA 2 cut(s) 325, 1466
Hpy166II GTNNAC 7 cut(s) 98, 812, 829, 889, 935, 1060, 1391
Hpy188III TCNNGA 8 cut(s) 108, 165, 702, 714, 1077, 1515, 1599, 1832
Hpy8I GTNNAC 7 cut(s) 98, 812, 829, 889, 935, 1060, 1391
HpyAV CCTTC 7 cut(s) 420, 433, 1316, 1634, 1687, 1829, 1857
HpyCH4III ACNGT 8 cut(s) 248, 675, 743, 939, 1012, 1115, 1783, 1939
HpyCH4IV ACGT 2 cut(s) 351, 1828
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 221, 235, 390, 752, 1711
HpyF3I CTNAG 5 cut(s) 306, 601, 651, 834, 1589
HpySE526I ACGT 2 cut(s) 351, 1828
HspAI GCGC 1 cut(s) 68
Kzo9I GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
LguI GCTCTTC 1 cut(s) 638
LmnI GCTCC 6 cut(s) 61, 80, 208, 229, 980, 1601
Lsp1109I GCAGC 5 cut(s) 439, 455, 566, 1605, 1759
LweI GCATC 4 cut(s) 346, 888, 1420, 1784
MaeI CTAG 9 cut(s) 72, 149, 656, 714, 897, 1491, 1554, 1566, 1635
MaeII ACGT 2 cut(s) 351, 1828
MaeIII GTNAC 4 cut(s) 918, 1103, 1469, 1506
MalI GATC 8 cut(s) 35, 255, 347, 1362, 1587, 1608, 1737, 1962
MboI GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
MboII GAAGA 9 cut(s) 348, 612, 615, 655, 669, 749, 1370, 1550, 1894
MfeI CAATTG 1 cut(s) 1191
MflI RGATCY 2 cut(s) 253, 1585
MhlI GDGCHC 6 cut(s) 391, 650, 891, 1273, 1533, 1795
MlsI TGGCCA 1 cut(s) 1317
MluNI TGGCCA 1 cut(s) 1317
MlyI GAGTC 3 cut(s) 824, 1466, 1556
MmeI TCCRAC 3 cut(s) 970, 1024, 1238
Mox20I TGGCCA 1 cut(s) 1317
MroXI GAANNNNTTC 1 cut(s) 23
MscI TGGCCA 1 cut(s) 1317
MseI TTAA 9 cut(s) 323, 461, 1130, 1181, 1265, 1448, 1785, 1866, 1943
MslI CAYNNNNRTG 3 cut(s) 884, 1449, 1798
Msp20I TGGCCA 1 cut(s) 1317
MspA1I CMGCKG 1 cut(s) 229
MspI CCGG 2 cut(s) 190, 206
MspR9I CCNGG 5 cut(s) 190, 1319, 1419, 1628, 1797
MunI CAATTG 1 cut(s) 1191
Mva1269I GAATGC 1 cut(s) 1001
MvaI CCWGG 4 cut(s) 1319, 1419, 1628, 1797
MwoI GCNNNNNNNGC 6 cut(s) 215, 221, 235, 390, 752, 1711
NciI CCSGG 1 cut(s) 190
NcoI CCATGG 1 cut(s) 494
NdeI CATATG 1 cut(s) 1282
NdeII GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
NlaIV GGNNCC 8 cut(s) 245, 804, 982, 1081, 1203, 1423, 1519, 1794
NmuCI GTSAC 3 cut(s) 918, 1103, 1469
NspI RCATGY 2 cut(s) 513, 1709
PciSI GCTCTTC 1 cut(s) 638
PctI GAATGC 1 cut(s) 1001
PdmI GAANNNNTTC 1 cut(s) 23
PflMI CCANNNNNTGG 1 cut(s) 291
PkrI GCNGC 7 cut(s) 217, 429, 445, 581, 797, 1595, 1749
PleI GAGTC 3 cut(s) 824, 1466, 1555
PpsI GAGTC 3 cut(s) 824, 1466, 1555
PpuMI RGGWCCY 2 cut(s) 1202, 1696
Psp5II RGGWCCY 2 cut(s) 1202, 1696
Psp6I CCWGG 4 cut(s) 1317, 1417, 1626, 1795
PspFI CCCAGC 1 cut(s) 798
PspGI CCWGG 4 cut(s) 1317, 1417, 1626, 1795
PspN4I GGNNCC 8 cut(s) 245, 804, 982, 1081, 1203, 1423, 1519, 1794
PspPI GGNCC 4 cut(s) 244, 1202, 1415, 1696
PspPPI RGGWCCY 2 cut(s) 1202, 1696
PsrI GAACNNNNNNTAC 2 cut(s) 795, 827
PstI CTGCAG 1 cut(s) 1685
PstNI CAGNNNCTG 2 cut(s) 752, 874
PsuI RGATCY 2 cut(s) 253, 1585
RsaI GTAC 2 cut(s) 99, 638
RsaNI GTAC 2 cut(s) 98, 637
RseI CAYNNNNRTG 3 cut(s) 884, 1449, 1798
SapI GCTCTTC 1 cut(s) 638
SaqAI TTAA 9 cut(s) 323, 461, 1130, 1181, 1265, 1448, 1785, 1866, 1943
SatI GCNGC 7 cut(s) 216, 428, 444, 580, 796, 1594, 1748
Sau3AI GATC 8 cut(s) 33, 253, 345, 1360, 1585, 1606, 1735, 1960
Sau96I GGNCC 4 cut(s) 244, 1202, 1415, 1696
SchI GAGTC 3 cut(s) 824, 1466, 1556
ScrFI CCNGG 5 cut(s) 190, 1319, 1419, 1628, 1797
SduI GDGCHC 6 cut(s) 391, 650, 891, 1273, 1533, 1795
SfaNI GCATC 4 cut(s) 346, 888, 1420, 1784
SfcI CTRYAG 1 cut(s) 1681
SinI GGWCC 3 cut(s) 244, 1202, 1696
SmiI ATTTAAAT 2 cut(s) 1182, 1449
SmiMI CAYNNNNRTG 3 cut(s) 884, 1449, 1798
SpeI ACTAGT 1 cut(s) 148
SsiI CCGC 6 cut(s) 138, 215, 227, 384, 795, 1433
SspMI CTAG 9 cut(s) 72, 149, 656, 714, 897, 1491, 1554, 1566, 1635
StyD4I CCNGG 5 cut(s) 188, 1317, 1417, 1626, 1795
StyI CCWWGG 2 cut(s) 494, 1766
SwaI ATTTAAAT 2 cut(s) 1182, 1449
TaaI ACNGT 8 cut(s) 248, 675, 743, 939, 1012, 1115, 1783, 1939
TaiI ACGT 2 cut(s) 354, 1831
TaqI TCGA 7 cut(s) 5, 32, 107, 164, 468, 1461, 1951
TatI WGTACW 2 cut(s) 97, 636
TauI GCSGC 2 cut(s) 218, 798
Tru1I TTAA 9 cut(s) 323, 461, 1130, 1181, 1265, 1448, 1785, 1866, 1943
Tru9I TTAA 9 cut(s) 323, 461, 1130, 1181, 1265, 1448, 1785, 1866, 1943
TscAI CASTG 5 cut(s) 528, 748, 991, 1102, 1112
TseFI GTSAC 3 cut(s) 918, 1103, 1469
TseI GCWGC 5 cut(s) 427, 443, 579, 1593, 1747
Tsp45I GTSAC 3 cut(s) 918, 1103, 1469
TspRI CASTG 5 cut(s) 528, 748, 991, 1102, 1112
Van91I CCANNNNNTGG 1 cut(s) 291
VneI GTGCAC 1 cut(s) 887
VpaK11BI GGWCC 3 cut(s) 244, 1202, 1696
XapI RAATTY 5 cut(s) 1177, 1183, 1222, 1261, 1399
XbaI TCTAGA 1 cut(s) 713
XceI RCATGY 2 cut(s) 513, 1709
XcmI CCANNNNNNNNNTGG 1 cut(s) 307
XmiI GTMKAC 1 cut(s) 934
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 9 cut(s) 72, 149, 656, 714, 897, 1491, 1554, 1566, 1635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.