Rh7BG066800

C3HC zinc finger-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0008062
Physical Location & Seq
Forward (+)
4428784 .. 4432585
3802 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG066800.1

Sequence Viewer

Length: 1995 bp
ATGGCGAAAGATTCCGAGAAGAGGTTCAATTCCGTCATGGACAAGCTCTTCTACGCTCCCAAACCTTCGCCGACCTCCACTTCCAGTGTAGAAGCATCGAGAGGTAAAAAGCGAGCGCATCCGTCTTCTGCATTGGCGCTGGTGGAGCCGAAATGGAGAGGTGTTAGACAGCAGGGGTTTCGGCATTGCTCAGCTCCGGCTTCACCGTCTCAGCCTCCGGTGTGTAGGCCGTGGGACCGGGGGGATCTTATGAGGAGAGTAGCTACATTCAAGTCCATGACTTGGTTTGCGAAGCCCAAGGTGGTAAGTGCTTTAAATTGTGCCAGGAGAGGTTGGGTCAACATAGATGTGGATACAATAGCCTGTGAATCATGTGGGGCACGCGTCCTGTTTTCTACTCCATCATCTTGGAATCAGCAGCAAGTTGAGAAGGCAGCTTTGGTATTTGGTTTAAAGCTAGACAATGGACATAAAATGCTTTGTCCATGGATTGACAATGCCTGTGATGAAATGCTGGCAGAGTTCCCGCCTACACCACCTCCAGTTTTAGTGGATAAATTTAGAGAGCGCTGCTCTGCGATTTTACAACTTCCAGTTCTTCCTGTGATATCTTCTTCAGCCATTGAGTACATGAAAAGCCCTCAGCTTGATCAATTTCTTGGACAGTCTTCGATATTTTTTGGCAATGGGTCTACTGAAATTTCTAGAATAGAACACTCTGATGATGAAGGCAGTGCAGAGTCTGCTAAGTTGTATTATCAGGCACAGAAGCTTATAAGCTTATGCGGTTGGGAACCTCGCTCACTACCTTATATTGTCGACTCTGAGAAGAGGTTGAATCAGTCTACACTTAAGGCAAATGTTTTGAGTTCATCTCATTTAACTGCTAGCGGCCAATATCCTATCATCAGTGTGCAATATGCCAGTAATCATGACCTAATTGAGGCAAATGAAACTTTCAGCAGTTCTAGTGCTCTACAGTCTGAATCCAATTCTGTGGTTTTAGATTGCAAGCTTTGTGGAGCTAGTGTAGGATTATGGGCTTTCACTACCGTTCCACGGCCTGTTGAATTATTCCAATTAGTTGGATATGCAGAAGAAAATTCTGAAACTCATCTTGGAACCCATGATTCAAGCACTGAAAGTCATCTTGGCAATAGGACAGATGTGGTAAGTGCTGGCTCAGATGGTGCAACAGCGTCGAAGGATAGATTTTCAAATTTAAATTTGACAATTGCAGGGGGTCCCACACCAACAAAACAGAACTTCAAAGCAAAGATTTCCTTACCTGTTATTGGCCAGAATTTAAGAGCTCAGTTTTCATATAATTCTGAATTCAGAGAATGTTTATCTGTTAGCCAAGAAGACATGCAATCTGGATCCCAAAAAGAGAATTTGCTTCAGGGGGGAGAATGTTACCTAGAAAATGTTGGATTGGAGAATTCAGAAGTTAGTGACCCTGGTCATTCTACAGCCCCTGATGCCAATAACACGTATAAAGGCGGTGAAGACAACAATAACTTGCTGGTGATGGCTTCTAGCAATGGAAATTTGTTAGATTCAGGAACAGTTGTGGAACATAGGCAGACTCAAGAGTCTCCATGTGCTCCATCTAGCTTGGAAGCCAGTGCAGTTGCCCATTGCACCTCAAACCATGAAGTTAGTCAAGAGAAACTGCAGATTCCTGCAAACAATGAACTTGTGGCCTGCAATACTGGGAAAGATCTAAGGCATGCATCCCCAGGTGGCACGATGGAGTTTGATTCTATTAAGCAGCATAGACATTTCTGCCCCTGGATTGCATCAACAGGTAATGGAGCACCTGGATGGAAACAAACACTCTCAGCTTTACAACGTCAAGATGGGTGTTCTCCTTCATCTGCATCCATAATCAAGGTTGATGACCCCATTACTTCAATCAGAAATCTTTTCATGTCTCCATCTCCGAAAAGAATGAAGCCCACAGTTTTAACAACTCGGAGTCCTCAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC

Protein Analysis

664

Amino Acids

72.29

Weight (kDa)

6.27

Isoelectric Point (pI)

58.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC PF07967 77 - 201 1.5e-33 NuBaID N-terminal domain (aka zf-C3HC)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 776
AasI GACNNNNNNGTC 1 cut(s) 1594
AccB7I CCANNNNNTGG 1 cut(s) 282
AccI GTMKAC 3 cut(s) 692, 819, 845
AccII CGCG 1 cut(s) 384
AciI CCGC 4 cut(s) 527, 786, 891, 1503
AclWI GGATC 3 cut(s) 252, 1374, 1387
AcoI YGGCCR 2 cut(s) 892, 1297
AcuI CTGAAG 2 cut(s) 600, 1385
AfaI GTAC 1 cut(s) 629
AfeI AGCGCT 1 cut(s) 569
AfiI CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
AflII CTTAAG 1 cut(s) 851
AflIII ACRYGT 2 cut(s) 382, 1491
AgsI TTSAA 8 cut(s) 28, 271, 838, 1070, 1134, 1218, 1270, 1917
AjnI CCWGG 5 cut(s) 323, 1459, 1741, 1793, 1822
AjuI GAANNNNNNNTTGG 6 cut(s) 422, 454, 1101, 1133, 1134, 1166
Alw21I GWGCWC 4 cut(s) 976, 1315, 1609, 1822
Alw26I GTCTC 3 cut(s) 213, 1602, 1941
AlwI GGATC 3 cut(s) 252, 1374, 1387
AlwNI CAGNNNCTG 2 cut(s) 743, 1478
Aor51HI AGCGCT 1 cut(s) 569
AoxI GGCC 5 cut(s) 227, 892, 1061, 1297, 1704
ApeKI GCWGC 4 cut(s) 418, 434, 570, 1774
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 3 cut(s) 118, 139, 570
AspS9I GGNCC 2 cut(s) 235, 1244
AsuC2I CCSGG 1 cut(s) 239
AsuHPI GGTGA 3 cut(s) 195, 1517, 1540
AsuNHI GCTAGC 1 cut(s) 887
AvaII GGWCC 2 cut(s) 235, 1244
BaeGI GKGCMC 1 cut(s) 382
BalI TGGCCA 1 cut(s) 1299
BamHI GGATCC 1 cut(s) 1379
BanII GRGCYC 1 cut(s) 1315
BbsI GAAGAC 4 cut(s) 117, 660, 1371, 1515
Bbv12I GWGCWC 4 cut(s) 976, 1315, 1609, 1822
BbvCI CCTCAGC 1 cut(s) 642
BbvI GCAGC 4 cut(s) 430, 446, 557, 1786
BccI CCATC 8 cut(s) 409, 1181, 1525, 1618, 1747, 1821, 1856, 1948
BceAI ACGGC 2 cut(s) 214, 1076
BcgI CGANNNNNNTGC 4 cut(s) 161, 195, 1182, 1216
BciT130I CCWGG 5 cut(s) 325, 1461, 1743, 1795, 1824
BciVI GTATCC 1 cut(s) 346
BclI TGATCA 1 cut(s) 649
BcnI CCSGG 1 cut(s) 239
BcoDI GTCTC 3 cut(s) 213, 1602, 1941
BfaI CTAG 8 cut(s) 458, 705, 888, 969, 1026, 1421, 1539, 1614
BfmI CTRYAG 3 cut(s) 977, 1470, 1676
BfoI RGCGCY 2 cut(s) 140, 571
BfrI CTTAAG 1 cut(s) 851
BfuI GTATCC 1 cut(s) 346
BglII AGATCT 1 cut(s) 1723
BisI GCNGC 5 cut(s) 419, 435, 571, 892, 1775
BlpI GCTNAGC 1 cut(s) 190
BlsI GCNGC 5 cut(s) 420, 436, 572, 893, 1776
Bme1390I CCNGG 6 cut(s) 239, 325, 1461, 1743, 1795, 1824
Bme18I GGWCC 2 cut(s) 235, 1244
BmgT120I GGNCC 2 cut(s) 235, 1244
BmiI GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
BmrFI CCNGG 6 cut(s) 239, 325, 1461, 1743, 1795, 1824
BmrI ACTGGG 1 cut(s) 1725
BmsI GCATC 6 cut(s) 104, 127, 1471, 1745, 1811, 1892
BmtI GCTAGC 1 cut(s) 891
BmuI ACTGGG 1 cut(s) 1725
BoxI GACNNNNGTC 1 cut(s) 1461
BpiI GAAGAC 4 cut(s) 117, 660, 1371, 1515
BplI GAGNNNNNCTC 4 cut(s) 557, 589, 859, 891
BpmI CTGGAG 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 642
Bpu1102I GCTNAGC 1 cut(s) 190
BpuEI CTTGAG 1 cut(s) 1575
BpuMI CCSGG 1 cut(s) 239
BsaAI YACGTR 1 cut(s) 1494
BsaJI CCNNGG 8 cut(s) 230, 238, 297, 485, 1058, 1459, 1741, 1793
BsaWI WCCGGW 1 cut(s) 217
BsaXI ACNNNNNCTCC 4 cut(s) 523, 553, 1014, 1044
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
Bse1I ACTGG 6 cut(s) 84, 542, 593, 924, 1626, 1720
Bse3DI GCAATG 4 cut(s) 184, 691, 1549, 1639
BseBI CCWGG 5 cut(s) 325, 1461, 1743, 1795, 1824
BseDI CCNNGG 8 cut(s) 230, 238, 297, 485, 1058, 1459, 1741, 1793
BseGI GGATG 4 cut(s) 118, 1736, 1832, 1883
BseLI CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
BseMI GCAATG 4 cut(s) 184, 691, 1549, 1639
BseMII CTCAG 7 cut(s) 204, 224, 656, 816, 1197, 1328, 1857
BseNI ACTGG 6 cut(s) 84, 542, 593, 924, 1626, 1720
BseRI GAGGAG 1 cut(s) 268
BseSI GKGCMC 1 cut(s) 382
BseXI GCAGC 4 cut(s) 430, 446, 557, 1786
BsgI GTGCAG 2 cut(s) 756, 1650
Bsh1236I CGCG 1 cut(s) 384
BshFI GGCC 5 cut(s) 229, 894, 1063, 1299, 1706
BsiHKAI GWGCWC 4 cut(s) 976, 1315, 1609, 1822
BsiSI CCGG 3 cut(s) 197, 218, 238
BslFI GGGAC 2 cut(s) 248, 1230
BslI CCNNNNNNNGG 5 cut(s) 21, 282, 943, 1059, 1295
BsmAI GTCTC 3 cut(s) 213, 1602, 1941
BsmBI CGTCTC 1 cut(s) 213
BsmFI GGGAC 2 cut(s) 248, 1230
BsnI GGCC 5 cut(s) 229, 894, 1063, 1299, 1706
Bsp1286I GDGCHC 5 cut(s) 382, 976, 1315, 1609, 1822
Bsp143I GATC 4 cut(s) 244, 649, 1379, 1723
Bsp1720I GCTNAGC 1 cut(s) 190
Bsp19I CCATGG 1 cut(s) 485
BspACI CCGC 4 cut(s) 527, 786, 891, 1503
BspANI GGCC 5 cut(s) 229, 894, 1063, 1299, 1706
BspCNI CTCAG 7 cut(s) 203, 223, 655, 817, 1196, 1327, 1856
BspFNI CGCG 1 cut(s) 384
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
BspMAI CTGCAG 1 cut(s) 1680
BspOI GCTAGC 1 cut(s) 891
BspPI GGATC 3 cut(s) 252, 1374, 1387
BspQI GCTCTTC 1 cut(s) 53
BspTI CTTAAG 1 cut(s) 851
BsrDI GCAATG 4 cut(s) 184, 691, 1549, 1639
BsrI ACTGG 6 cut(s) 84, 542, 593, 924, 1626, 1720
BssECI CCNNGG 8 cut(s) 230, 238, 297, 485, 1058, 1459, 1741, 1793
BssMI GATC 4 cut(s) 244, 649, 1379, 1723
BssT1I CCWWGG 2 cut(s) 297, 485
Bst2UI CCWGG 5 cut(s) 325, 1461, 1743, 1795, 1824
Bst4CI ACNGT 6 cut(s) 207, 666, 981, 1054, 1570, 1966
Bst6I CTCTTC 3 cut(s) 14, 53, 824
BstAFI CTTAAG 1 cut(s) 851
BstAPI GCANNNNNTGC 1 cut(s) 743
BstBAI YACGTR 1 cut(s) 1494
BstC8I GCNNGC 8 cut(s) 114, 382, 516, 889, 1013, 1180, 1708, 1734
BstDEI CTNAG 9 cut(s) 190, 210, 642, 747, 825, 1183, 1314, 1727, 1843
BstDSI CCRYGG 3 cut(s) 230, 485, 1058
BstENI CCTNNNNNAGG 1 cut(s) 941
BstF5I GGATG 4 cut(s) 118, 1736, 1832, 1883
BstFNI CGCG 1 cut(s) 384
BstH2I RGCGCY 2 cut(s) 140, 571
BstHHI GCGC 3 cut(s) 118, 139, 570
BstKTI GATC 4 cut(s) 247, 652, 1382, 1726
BstMAI GTCTC 3 cut(s) 213, 1602, 1941
BstMBI GATC 4 cut(s) 244, 649, 1379, 1723
BstMWI GCNNNNNNNGC 3 cut(s) 145, 743, 1481
BstNI CCWGG 5 cut(s) 325, 1461, 1743, 1795, 1824
BstNSI RCATGY 2 cut(s) 1372, 1736
BstPAI GACNNNNGTC 1 cut(s) 1461
BstSCI CCNGG 6 cut(s) 237, 323, 1459, 1741, 1793, 1822
BstSFI CTRYAG 3 cut(s) 977, 1470, 1676
BstSLI GKGCMC 1 cut(s) 382
BstUI CGCG 1 cut(s) 384
BstV1I GCAGC 4 cut(s) 430, 446, 557, 1786
BstV2I GAAGAC 4 cut(s) 117, 660, 1371, 1515
BstX2I RGATCY 3 cut(s) 244, 1379, 1723
BstXI CCANNNNNNTGG 3 cut(s) 408, 997, 1085
BstYI RGATCY 3 cut(s) 244, 1379, 1723
BsuI GTATCC 1 cut(s) 346
BsuRI GGCC 5 cut(s) 229, 894, 1063, 1299, 1706
BtgI CCRYGG 3 cut(s) 230, 485, 1058
BtsCI GGATG 4 cut(s) 118, 1736, 1832, 1883
BtsI GCAGTG 1 cut(s) 739
BtsIMutI CAGTG 5 cut(s) 91, 739, 916, 1137, 1633
Cac8I GCNNGC 8 cut(s) 114, 382, 516, 889, 1013, 1180, 1708, 1734
CaiI CAGNNNCTG 2 cut(s) 743, 1478
CciI TCATGA 1 cut(s) 931
CfoI GCGC 3 cut(s) 118, 139, 570
Cfr13I GGNCC 2 cut(s) 235, 1244
CseI GACGC 2 cut(s) 373, 1188
Csp6I GTAC 1 cut(s) 628
CspCI CAANNNNNGTGG 2 cut(s) 1000, 1035
CviQI GTAC 1 cut(s) 628
DdeI CTNAG 9 cut(s) 190, 210, 642, 747, 825, 1183, 1314, 1727, 1843
DpnI GATC 4 cut(s) 246, 651, 1381, 1725
DpnII GATC 4 cut(s) 244, 649, 1379, 1723
DraI TTTAAA 3 cut(s) 315, 453, 1224
DrdI GACNNNNNNGTC 1 cut(s) 1594
DseDI GACNNNNNNGTC 1 cut(s) 1594
EaeI YGGCCR 2 cut(s) 892, 1297
Eam1104I CTCTTC 3 cut(s) 14, 53, 824
EarI CTCTTC 3 cut(s) 14, 53, 824
Ecl136II GAGCTC 1 cut(s) 1313
Eco130I CCWWGG 2 cut(s) 297, 485
Eco24I GRGCYC 1 cut(s) 1315
Eco32I GATATC 1 cut(s) 609
Eco47I GGWCC 2 cut(s) 235, 1244
Eco47III AGCGCT 1 cut(s) 569
Eco53kI GAGCTC 1 cut(s) 1313
Eco57I CTGAAG 2 cut(s) 600, 1385
EcoICRI GAGCTC 1 cut(s) 1313
EcoNI CCTNNNNNAGG 1 cut(s) 941
EcoO109I RGGNCCY 1 cut(s) 1244
EcoRI GAATTC 2 cut(s) 1334, 1441
EcoRII CCWGG 5 cut(s) 323, 1459, 1741, 1793, 1822
EcoRV GATATC 1 cut(s) 609
EcoT14I CCWWGG 2 cut(s) 297, 485
EcoT22I ATGCAT 1 cut(s) 1738
EcoT38I GRGCYC 1 cut(s) 1315
ErhI CCWWGG 2 cut(s) 297, 485
Esp3I CGTCTC 1 cut(s) 213
FalI AAGNNNNNCTT 2 cut(s) 1268, 1300
FaqI GGGAC 2 cut(s) 248, 1230
FauI CCCGC 1 cut(s) 534
FbaI TGATCA 1 cut(s) 649
FblI GTMKAC 3 cut(s) 692, 819, 845
Fnu4HI GCNGC 5 cut(s) 419, 435, 571, 892, 1775
FokI GGATG 4 cut(s) 105, 1723, 1839, 1870
FriOI GRGCYC 1 cut(s) 1315
Fsp4HI GCNGC 5 cut(s) 419, 435, 571, 892, 1775
FspBI CTAG 8 cut(s) 458, 705, 888, 969, 1026, 1421, 1539, 1614
GlaI GCGC 3 cut(s) 117, 138, 569
GluI GCNGC 5 cut(s) 419, 435, 571, 892, 1775
GsuI CTGGAG 1 cut(s) 525
HaeII RGCGCY 2 cut(s) 140, 571
HaeIII GGCC 5 cut(s) 229, 894, 1063, 1299, 1706
HapII CCGG 3 cut(s) 197, 218, 238
HgaI GACGC 2 cut(s) 373, 1188
HhaI GCGC 3 cut(s) 118, 139, 570
Hin6I GCGC 3 cut(s) 116, 137, 568
HinP1I GCGC 3 cut(s) 116, 137, 568
HincII GTYRAC 2 cut(s) 340, 820
HindII GTYRAC 2 cut(s) 340, 820
HindIII AAGCTT 3 cut(s) 770, 778, 1013
HpaII CCGG 3 cut(s) 197, 218, 238
HphI GGTGA 3 cut(s) 195, 1517, 1540
Hpy166II GTNNAC 4 cut(s) 340, 693, 820, 846
Hpy188III TCNNGA 8 cut(s) 99, 705, 932, 1377, 1563, 1592, 1667, 1859
Hpy8I GTNNAC 4 cut(s) 340, 693, 820, 846
Hpy99I CGWCG 1 cut(s) 1204
HpyAV CCTTC 5 cut(s) 75, 424, 722, 1198, 1884
HpyCH4III ACNGT 6 cut(s) 207, 666, 981, 1054, 1570, 1966
HpyCH4IV ACGT 2 cut(s) 1493, 1855
HpyF10VI GCNNNNNNNGC 3 cut(s) 145, 743, 1481
HpyF3I CTNAG 9 cut(s) 190, 210, 642, 747, 825, 1183, 1314, 1727, 1843
HpySE526I ACGT 2 cut(s) 1493, 1855
HspAI GCGC 3 cut(s) 116, 137, 568
KflI GGGWCCC 1 cut(s) 1244
Ksp22I TGATCA 1 cut(s) 649
Kzo9I GATC 4 cut(s) 244, 649, 1379, 1723
LguI GCTCTTC 1 cut(s) 53
LmnI GCTCC 6 cut(s) 61, 145, 199, 1022, 1612, 1817
Lsp1109I GCAGC 4 cut(s) 430, 446, 557, 1786
LweI GCATC 6 cut(s) 104, 127, 1471, 1745, 1811, 1892
MaeI CTAG 8 cut(s) 458, 705, 888, 969, 1026, 1421, 1539, 1614
MaeII ACGT 2 cut(s) 1493, 1855
MaeIII GTNAC 2 cut(s) 1415, 1454
MalI GATC 4 cut(s) 246, 651, 1381, 1725
MboI GATC 4 cut(s) 244, 649, 1379, 1723
MfeI CAATTG 1 cut(s) 1233
MflI RGATCY 3 cut(s) 244, 1379, 1723
MhlI GDGCHC 5 cut(s) 382, 976, 1315, 1609, 1822
MlsI TGGCCA 1 cut(s) 1299
MluI ACGCGT 1 cut(s) 382
MluNI TGGCCA 1 cut(s) 1299
MlyI GAGTC 5 cut(s) 749, 815, 1582, 1604, 1990
MmeI TCCRAC 2 cut(s) 1066, 1411
Mox20I TGGCCA 1 cut(s) 1299
Mph1103I ATGCAT 1 cut(s) 1738
MroXI GAANNNNTTC 1 cut(s) 23
MscI TGGCCA 1 cut(s) 1299
MseI TTAA 8 cut(s) 314, 452, 852, 881, 1223, 1307, 1770, 1970
MslI CAYNNNNRTG 4 cut(s) 347, 720, 911, 1825
Msp20I TGGCCA 1 cut(s) 1299
MspCI CTTAAG 1 cut(s) 851
MspI CCGG 3 cut(s) 197, 218, 238
MspR9I CCNGG 6 cut(s) 239, 325, 1461, 1743, 1795, 1824
MunI CAATTG 1 cut(s) 1233
MvaI CCWGG 5 cut(s) 325, 1461, 1743, 1795, 1824
MvnI CGCG 1 cut(s) 384
MwoI GCNNNNNNNGC 3 cut(s) 145, 743, 1481
NciI CCSGG 1 cut(s) 239
NcoI CCATGG 1 cut(s) 485
NdeII GATC 4 cut(s) 244, 649, 1379, 1723
NheI GCTAGC 1 cut(s) 887
NlaIV GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
NmuCI GTSAC 1 cut(s) 1454
NsiI ATGCAT 1 cut(s) 1738
NspI RCATGY 2 cut(s) 1372, 1736
PaeI GCATGC 1 cut(s) 1736
PagI TCATGA 1 cut(s) 931
PciSI GCTCTTC 1 cut(s) 53
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 9 cut(s) 11, 368, 412, 838, 986, 1130, 1559, 1681, 1763
PflMI CCANNNNNTGG 1 cut(s) 282
PkrI GCNGC 5 cut(s) 420, 436, 572, 893, 1776
PleI GAGTC 5 cut(s) 748, 815, 1582, 1603, 1989
PpsI GAGTC 5 cut(s) 748, 815, 1582, 1603, 1989
Ppu21I YACGTR 1 cut(s) 1494
PpuMI RGGWCCY 1 cut(s) 1244
PshAI GACNNNNGTC 1 cut(s) 1461
PsiI TTATAA 1 cut(s) 776
Psp124BI GAGCTC 1 cut(s) 1315
Psp5II RGGWCCY 1 cut(s) 1244
Psp6I CCWGG 5 cut(s) 323, 1459, 1741, 1793, 1822
PspGI CCWGG 5 cut(s) 323, 1459, 1741, 1793, 1822
PspN4I GGNNCC 7 cut(s) 147, 236, 795, 1123, 1245, 1246, 1381
PspPI GGNCC 2 cut(s) 235, 1244
PspPPI RGGWCCY 1 cut(s) 1244
PstI CTGCAG 1 cut(s) 1680
PstNI CAGNNNCTG 2 cut(s) 743, 1478
PsuI RGATCY 3 cut(s) 244, 1379, 1723
RsaI GTAC 1 cut(s) 629
RsaNI GTAC 1 cut(s) 628
RseI CAYNNNNRTG 4 cut(s) 347, 720, 911, 1825
SacI GAGCTC 1 cut(s) 1315
SalI GTCGAC 1 cut(s) 818
SapI GCTCTTC 1 cut(s) 53
SaqAI TTAA 8 cut(s) 314, 452, 852, 881, 1223, 1307, 1770, 1970
SatI GCNGC 5 cut(s) 419, 435, 571, 892, 1775
Sau3AI GATC 4 cut(s) 244, 649, 1379, 1723
Sau96I GGNCC 2 cut(s) 235, 1244
SchI GAGTC 5 cut(s) 749, 815, 1582, 1604, 1990
ScrFI CCNGG 6 cut(s) 239, 325, 1461, 1743, 1795, 1824
SduI GDGCHC 5 cut(s) 382, 976, 1315, 1609, 1822
SfaNI GCATC 6 cut(s) 104, 127, 1471, 1745, 1811, 1892
SfcI CTRYAG 3 cut(s) 977, 1470, 1676
SinI GGWCC 2 cut(s) 235, 1244
SmiI ATTTAAAT 1 cut(s) 1224
SmiMI CAYNNNNRTG 4 cut(s) 347, 720, 911, 1825
SmlI CTYRAG 2 cut(s) 851, 1590
SmoI CTYRAG 2 cut(s) 851, 1590
SphI GCATGC 1 cut(s) 1736
SsiI CCGC 4 cut(s) 527, 786, 891, 1503
SspMI CTAG 8 cut(s) 458, 705, 888, 969, 1026, 1421, 1539, 1614
SstI GAGCTC 1 cut(s) 1315
StyD4I CCNGG 6 cut(s) 237, 323, 1459, 1741, 1793, 1822
StyI CCWWGG 2 cut(s) 297, 485
SwaI ATTTAAAT 1 cut(s) 1224
TaaI ACNGT 6 cut(s) 207, 666, 981, 1054, 1570, 1966
TaiI ACGT 2 cut(s) 1496, 1858
TaqI TCGA 4 cut(s) 98, 671, 819, 1202
TatI WGTACW 1 cut(s) 627
TauI GCSGC 1 cut(s) 894
TfiI GAWTC 9 cut(s) 11, 368, 412, 838, 986, 1130, 1559, 1681, 1763
Tru1I TTAA 8 cut(s) 314, 452, 852, 881, 1223, 1307, 1770, 1970
Tru9I TTAA 8 cut(s) 314, 452, 852, 881, 1223, 1307, 1770, 1970
TscAI CASTG 5 cut(s) 91, 739, 916, 1144, 1633
TseFI GTSAC 1 cut(s) 1454
TseI GCWGC 4 cut(s) 418, 434, 570, 1774
Tsp45I GTSAC 1 cut(s) 1454
TspGWI ACGGA 2 cut(s) 22, 111
TspRI CASTG 5 cut(s) 91, 739, 916, 1144, 1633
Van91I CCANNNNNTGG 1 cut(s) 282
Vha464I CTTAAG 1 cut(s) 851
VpaK11BI GGWCC 2 cut(s) 235, 1244
XagI CCTNNNNNAGG 1 cut(s) 941
XbaI TCTAGA 1 cut(s) 704
XceI RCATGY 2 cut(s) 1372, 1736
XmiI GTMKAC 3 cut(s) 692, 819, 845
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 8 cut(s) 458, 705, 888, 969, 1026, 1421, 1539, 1614
Zsp2I ATGCAT 1 cut(s) 1738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.