FvH4_5g15140

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
8552357 .. 8553847
1491 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15140.t1

Sequence Viewer

Length: 1491 bp
ATGGCTCTTGTTATGTTGCCCATGTCAATAATTCTGTTATTCCTTGCTTACAAACTCTATAACAAGCTAAGGTTCAAGCTTCCTCCTGGGCCTTACCCATTGCCGGTAATCGGAAACCTTTTCGCCATGGGTGCCGTTAAATTTCGGTGTTTTTCCGAGTGGTCACAAGTTTATGGTCCAATCATGTCTGTGTGGTTTGGTTCACATTTGCATGTAGTAGTGTCAAACCCAGAGTTGGCAAAGCAAGTGCTCAAAGACAATGATGAGCAGTTAGCAAATAGGCACAGGAATTGGACATATTCTAGACTCAGCAGAAATGGCGAGGGTCTTATATGGGCTGATTATAGTCCTCACTACACAAAGCTTAGAAATGTTTGTGTGCTTGAGCTTTTCTCTACCAAGAGCCTTGAGACTTATAGACACATTAGGGAAGATGAAGTTAGAGTCATGGTCAAGTCACTTTTCAAAGATTGCACTAGTGCTTGTGACTCTGGAAGAGGCTTAGTGATCAGAAGGTATTTGGTAGCTGTGGCATTCAACAACATCACACGGCTACTGTTCGGAAAGCGGTTCGAGAATGAAGAGGGTGTGCTAAACGAGCAAGGGAAGGAGTTCGTGGGAAATCTGACTAAAAAATCAGAGGGTGGGACATTTCTTGCTGTTGTTCAAGAGATTTGGTGGCTTACTTGGGTTTTGTGGCCTCAACGTATAGCACTTACTAAAATGAGGGCAGAGGAAGACGATCTAAAACGAGCAATCATGGAGGATCACATAGGGAAGGGGGAAGAGAAACATTTTTTGGGCGCATTGCTAAGTATTCAAGAGAAATATGATCTCACCCAGGATGATATTGGAGGATTACTTTGGGGACAGGTCAGTGCTGGCTTGGATACAGTTGCAATATCAGCAGAATGGGCCATGGCAGAGATGATCAAGAACCCGAGGGTGCTGCGAAAGGCGCAAGAGGAGCTTGACCGTGTAATAGGGCTGGAACGGCCAATGACGGAGGCTGATATTTCAAACCTTCCATACCTGAAATGTGTTGCCAAAGAGGCACTGAGGCTTCACCCTCCAACCCCATTGATGCTGCCTCACAGAGCCAGTGCCAATGTTAAGATTGGTGGCTATGACATTCCTAAGGGAACTGCTGTTCATGTAAACGTCTGGGCCATCGGGCGGGACTCAAATGTGTGGGAAGACCCACAGAGTTTCCGACCTGAGAGGTTCATCGAGACAAAGGAGCATGGTTTTGGGTATCTGCCATTTGGTGCAGGAAAGCGTACGTGCCCAGCAGCACAAGTAGCCACCAACTTGGTCATACTGATGTTGGGAAACCTTTTGCATAGCTTTGCTTGGAGCTTGCCCGAAGGCGTCCCGTCAAAGGAGATTGACATGTCAGAGAGCCCAGGATTGGTCTGCTATATGAAGACTCCTCTGATAGCAGTCCCTCAATTGAGATTGCCAGAGCACTCTTACAAGCATATGCTTTGA

Protein Analysis

497

Amino Acids

56.3

Weight (kDa)

8.5

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 28 - 472 1e-93 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 131
AciI CCGC 2 cut(s) 568, 1177
AclWI GGATC 1 cut(s) 774
AcoI YGGCCR 1 cut(s) 995
AcsI RAATTY 1 cut(s) 140
AcyI GRCGYC 1 cut(s) 1371
AfaI GTAC 1 cut(s) 1282
AfiI CCNNNNNNNGG 6 cut(s) 103, 110, 235, 1176, 1381, 1411
AflIII ACRYGT 1 cut(s) 1392
AgsI TTSAA 6 cut(s) 76, 466, 538, 668, 821, 1020
AhlI ACTAGT 1 cut(s) 476
AjnI CCWGG 3 cut(s) 85, 840, 1405
AjuI GAANNNNNNNTTGG 2 cut(s) 782, 814
AloI GAACNNNNNNTCC 2 cut(s) 1134, 1166
AluBI AGCT 8 cut(s) 67, 79, 364, 388, 527, 970, 1347, 1359
AluI AGCT 8 cut(s) 67, 79, 364, 388, 527, 970, 1347, 1359
Alw21I GWGCWC 2 cut(s) 252, 1470
Alw26I GTCTC 2 cut(s) 404, 1226
AlwI GGATC 1 cut(s) 774
Ama87I CYCGRG 1 cut(s) 940
AoxI GGCC 5 cut(s) 89, 698, 915, 995, 1167
ApeKI GCWGC 3 cut(s) 949, 1087, 1292
ApoI RAATTY 1 cut(s) 140
Asp700I GAANNNNTTC 1 cut(s) 611
AspLEI GCGC 2 cut(s) 806, 961
AspS9I GGNCC 4 cut(s) 89, 176, 915, 1167
AsuHPI GGTGA 2 cut(s) 829, 1058
AvaI CYCGRG 1 cut(s) 940
AvaII GGWCC 1 cut(s) 176
AxyI CCTNAGG 1 cut(s) 1137
BaeGI GKGCMC 1 cut(s) 1289
BanI GGYRCC 1 cut(s) 131
BanII GRGCYC 1 cut(s) 1406
BbsI GAAGAC 3 cut(s) 744, 1203, 1433
Bbv12I GWGCWC 2 cut(s) 252, 1470
BbvI GCAGC 3 cut(s) 936, 1074, 1304
BccI CCATC 1 cut(s) 1178
BceAI ACGGC 3 cut(s) 119, 566, 1010
BcgI CGANNNNNNTGC 2 cut(s) 931, 965
BciT130I CCWGG 3 cut(s) 87, 842, 1407
BciVI GTATCC 1 cut(s) 883
BclI TGATCA 2 cut(s) 507, 930
BcoDI GTCTC 2 cut(s) 404, 1226
BcuI ACTAGT 1 cut(s) 476
BfaI CTAG 2 cut(s) 303, 477
BfuI GTATCC 1 cut(s) 883
BglI GCCNNNNNGGC 1 cut(s) 1052
BisI GCNGC 3 cut(s) 950, 1088, 1293
BlsI GCNGC 3 cut(s) 951, 1089, 1294
Bme1390I CCNGG 3 cut(s) 87, 842, 1407
Bme18I GGWCC 1 cut(s) 176
BmeT110I CYCGRG 1 cut(s) 940
BmgT120I GGNCC 4 cut(s) 89, 176, 915, 1167
BmiI GGNNCC 1 cut(s) 133
BmrFI CCNGG 3 cut(s) 87, 842, 1407
BmsI GCATC 1 cut(s) 1074
BpiI GAAGAC 3 cut(s) 744, 1203, 1433
BplI GAGNNNNNCTC 2 cut(s) 377, 409
Bpu10I CCTNAGC 1 cut(s) 68
BpuEI CTTGAG 2 cut(s) 404, 428
BsaAI YACGTR 1 cut(s) 1284
BsaHI GRCGYC 1 cut(s) 1371
BsaJI CCNNGG 6 cut(s) 86, 126, 840, 918, 941, 1405
Bsc4I CCNNNNNNNGG 6 cut(s) 103, 110, 235, 1176, 1381, 1411
Bse118I RCCGGY 1 cut(s) 103
Bse1I ACTGG 1 cut(s) 1101
Bse21I CCTNAGG 1 cut(s) 1137
Bse3DI GCAATG 2 cut(s) 98, 806
BseBI CCWGG 3 cut(s) 87, 842, 1407
BseDI CCNNGG 6 cut(s) 86, 126, 840, 918, 941, 1405
BseGI GGATG 1 cut(s) 850
BseLI CCNNNNNNNGG 6 cut(s) 103, 110, 235, 1176, 1381, 1411
BseMI GCAATG 2 cut(s) 98, 806
BseMII CTCAG 3 cut(s) 322, 1049, 1209
BseNI ACTGG 1 cut(s) 1101
BseRI GAGGAG 2 cut(s) 980, 1422
BseSI GKGCMC 1 cut(s) 1289
BseXI GCAGC 3 cut(s) 936, 1074, 1304
BseYI CCCAGC 1 cut(s) 1288
BsgI GTGCAG 1 cut(s) 1290
BshFI GGCC 5 cut(s) 91, 700, 917, 997, 1169
BshNI GGYRCC 1 cut(s) 131
BsiHKAI GWGCWC 2 cut(s) 252, 1470
BsiHKCI CYCGRG 1 cut(s) 940
BsiSI CCGG 1 cut(s) 104
BsiWI CGTACG 1 cut(s) 1280
BslFI GGGAC 5 cut(s) 661, 882, 1193, 1358, 1430
BslI CCNNNNNNNGG 6 cut(s) 103, 110, 235, 1176, 1381, 1411
BsmAI GTCTC 2 cut(s) 404, 1226
BsmFI GGGAC 5 cut(s) 661, 882, 1193, 1358, 1430
BsmI GAATGC 1 cut(s) 533
BsnI GGCC 5 cut(s) 91, 700, 917, 997, 1169
BsoBI CYCGRG 1 cut(s) 940
Bsp1286I GDGCHC 4 cut(s) 252, 1289, 1406, 1470
Bsp143I GATC 5 cut(s) 507, 742, 766, 832, 930
Bsp19I CCATGG 2 cut(s) 126, 918
BspACI CCGC 2 cut(s) 568, 1177
BspANI GGCC 5 cut(s) 91, 700, 917, 997, 1169
BspCNI CTCAG 3 cut(s) 321, 1050, 1210
BspLI GGNNCC 1 cut(s) 133
BspPI GGATC 1 cut(s) 774
BspT107I GGYRCC 1 cut(s) 131
BsrDI GCAATG 2 cut(s) 98, 806
BsrFI RCCGGY 1 cut(s) 103
BsrI ACTGG 1 cut(s) 1101
BssAI RCCGGY 1 cut(s) 103
BssECI CCNNGG 6 cut(s) 86, 126, 840, 918, 941, 1405
BssMI GATC 5 cut(s) 507, 742, 766, 832, 930
BssNI GRCGYC 1 cut(s) 1371
BssT1I CCWWGG 2 cut(s) 126, 918
Bst2UI CCWGG 3 cut(s) 87, 842, 1407
Bst4CI ACNGT 3 cut(s) 558, 895, 977
Bst6I CTCTTC 3 cut(s) 490, 576, 780
BstACI GRCGYC 1 cut(s) 1371
BstBAI YACGTR 1 cut(s) 1284
BstC8I GCNNGC 2 cut(s) 883, 1361
BstDEI CTNAG 8 cut(s) 68, 308, 365, 502, 812, 1058, 1137, 1218
BstDSI CCRYGG 2 cut(s) 126, 918
BstF5I GGATG 1 cut(s) 850
BstHHI GCGC 2 cut(s) 806, 961
BstKTI GATC 5 cut(s) 510, 745, 769, 835, 933
BstMAI GTCTC 2 cut(s) 404, 1226
BstMBI GATC 5 cut(s) 507, 742, 766, 832, 930
BstNI CCWGG 3 cut(s) 87, 842, 1407
BstNSI RCATGY 2 cut(s) 215, 1396
BstSCI CCNGG 3 cut(s) 85, 840, 1405
BstSLI GKGCMC 1 cut(s) 1289
BstV1I GCAGC 3 cut(s) 936, 1074, 1304
BstV2I GAAGAC 3 cut(s) 744, 1203, 1433
BstXI CCANNNNNNTGG 1 cut(s) 1312
Bsu36I CCTNAGG 1 cut(s) 1137
BsuI GTATCC 1 cut(s) 883
BsuRI GGCC 5 cut(s) 91, 700, 917, 997, 1169
BtgI CCRYGG 2 cut(s) 126, 918
BtsCI GGATG 1 cut(s) 850
BtsIMutI CAGTG 3 cut(s) 883, 1055, 1108
Cac8I GCNNGC 2 cut(s) 883, 1361
CfoI GCGC 2 cut(s) 806, 961
Cfr10I RCCGGY 1 cut(s) 103
Cfr13I GGNCC 4 cut(s) 89, 176, 915, 1167
CseI GACGC 1 cut(s) 1360
Csp6I GTAC 1 cut(s) 1281
CviQI GTAC 1 cut(s) 1281
DdeI CTNAG 8 cut(s) 68, 308, 365, 502, 812, 1058, 1137, 1218
DpnI GATC 5 cut(s) 509, 744, 768, 834, 932
DpnII GATC 5 cut(s) 507, 742, 766, 832, 930
EaeI YGGCCR 1 cut(s) 995
Eam1104I CTCTTC 3 cut(s) 490, 576, 780
EarI CTCTTC 3 cut(s) 490, 576, 780
Eco130I CCWWGG 2 cut(s) 126, 918
Eco24I GRGCYC 1 cut(s) 1406
Eco47I GGWCC 1 cut(s) 176
Eco81I CCTNAGG 1 cut(s) 1137
Eco88I CYCGRG 1 cut(s) 940
EcoRII CCWGG 3 cut(s) 85, 840, 1405
EcoT14I CCWWGG 2 cut(s) 126, 918
EcoT38I GRGCYC 1 cut(s) 1406
ErhI CCWWGG 2 cut(s) 126, 918
FalI AAGNNNNNCTT 2 cut(s) 954, 986
FaqI GGGAC 5 cut(s) 661, 882, 1193, 1358, 1430
FauI CCCGC 1 cut(s) 1170
FauNDI CATATG 1 cut(s) 1482
FbaI TGATCA 2 cut(s) 507, 930
Fnu4HI GCNGC 3 cut(s) 950, 1088, 1293
FokI GGATG 1 cut(s) 857
FriOI GRGCYC 1 cut(s) 1406
Fsp4HI GCNGC 3 cut(s) 950, 1088, 1293
FspBI CTAG 2 cut(s) 303, 477
GlaI GCGC 2 cut(s) 805, 960
GluI GCNGC 3 cut(s) 950, 1088, 1293
GsaI CCCAGC 1 cut(s) 1292
HaeIII GGCC 5 cut(s) 91, 700, 917, 997, 1169
HapII CCGG 1 cut(s) 104
HgaI GACGC 1 cut(s) 1360
HhaI GCGC 2 cut(s) 806, 961
Hin1I GRCGYC 1 cut(s) 1371
Hin6I GCGC 2 cut(s) 804, 959
HinP1I GCGC 2 cut(s) 804, 959
HindIII AAGCTT 2 cut(s) 77, 362
HinfI GANTC 5 cut(s) 306, 444, 488, 1181, 1429
HpaII CCGG 1 cut(s) 104
HphI GGTGA 2 cut(s) 829, 1058
Hpy166II GTNNAC 2 cut(s) 203, 1159
Hpy188I TCNGA 9 cut(s) 113, 157, 512, 563, 627, 640, 1214, 1399, 1437
Hpy188III TCNNGA 7 cut(s) 303, 492, 574, 668, 821, 934, 1231
Hpy8I GTNNAC 2 cut(s) 203, 1159
HpyAV CCTTC 5 cut(s) 507, 601, 772, 1034, 1361
HpyCH4III ACNGT 3 cut(s) 558, 895, 977
HpyCH4IV ACGT 3 cut(s) 706, 1161, 1283
HpyCH4V TGCA 5 cut(s) 211, 474, 899, 1271, 1342
HpyF3I CTNAG 8 cut(s) 68, 308, 365, 502, 812, 1058, 1137, 1218
HpySE526I ACGT 3 cut(s) 706, 1161, 1283
Hsp92I GRCGYC 1 cut(s) 1371
HspAI GCGC 2 cut(s) 804, 959
Ksp22I TGATCA 2 cut(s) 507, 930
Kzo9I GATC 5 cut(s) 507, 742, 766, 832, 930
LmnI GCTCC 3 cut(s) 967, 1240, 1356
Lsp1109I GCAGC 3 cut(s) 936, 1074, 1304
LweI GCATC 1 cut(s) 1074
MaeI CTAG 2 cut(s) 303, 477
MaeII ACGT 3 cut(s) 706, 1161, 1283
MaeIII GTNAC 3 cut(s) 162, 456, 485
MalI GATC 5 cut(s) 509, 744, 768, 834, 932
MboI GATC 5 cut(s) 507, 742, 766, 832, 930
MboII GAAGA 7 cut(s) 443, 507, 593, 749, 797, 1208, 1438
MfeI CAATTG 1 cut(s) 1451
MhlI GDGCHC 4 cut(s) 252, 1289, 1406, 1470
MluCI AATT 4 cut(s) 30, 140, 289, 1451
MlyI GAGTC 5 cut(s) 300, 453, 482, 1175, 1423
MmeI TCCRAC 2 cut(s) 1097, 1237
MroXI GAANNNNTTC 1 cut(s) 611
MseI TTAA 2 cut(s) 138, 1113
MslI CAYNNNNRTG 3 cut(s) 188, 210, 1322
MspI CCGG 1 cut(s) 104
MspR9I CCNGG 3 cut(s) 87, 842, 1407
MunI CAATTG 1 cut(s) 1451
Mva1269I GAATGC 1 cut(s) 533
MvaI CCWGG 3 cut(s) 87, 842, 1407
NcoI CCATGG 2 cut(s) 126, 918
NdeI CATATG 1 cut(s) 1482
NdeII GATC 5 cut(s) 507, 742, 766, 832, 930
NlaIV GGNNCC 1 cut(s) 133
NmuCI GTSAC 3 cut(s) 162, 456, 485
NspI RCATGY 2 cut(s) 215, 1396
PciI ACATGT 1 cut(s) 1392
PctI GAATGC 1 cut(s) 533
PdmI GAANNNNTTC 1 cut(s) 611
Pfl23II CGTACG 1 cut(s) 1280
PkrI GCNGC 3 cut(s) 951, 1089, 1294
PleI GAGTC 5 cut(s) 300, 452, 482, 1175, 1423
PpsI GAGTC 5 cut(s) 300, 452, 482, 1175, 1423
Ppu21I YACGTR 1 cut(s) 1284
PscI ACATGT 1 cut(s) 1392
Psp6I CCWGG 3 cut(s) 85, 840, 1405
PspFI CCCAGC 1 cut(s) 1288
PspGI CCWGG 3 cut(s) 85, 840, 1405
PspLI CGTACG 1 cut(s) 1280
PspN4I GGNNCC 1 cut(s) 133
PspPI GGNCC 4 cut(s) 89, 176, 915, 1167
RsaI GTAC 1 cut(s) 1282
RsaNI GTAC 1 cut(s) 1281
RseI CAYNNNNRTG 3 cut(s) 188, 210, 1322
SaqAI TTAA 2 cut(s) 138, 1113
SatI GCNGC 3 cut(s) 950, 1088, 1293
Sau3AI GATC 5 cut(s) 507, 742, 766, 832, 930
Sau96I GGNCC 4 cut(s) 89, 176, 915, 1167
SchI GAGTC 5 cut(s) 300, 453, 482, 1175, 1423
ScrFI CCNGG 3 cut(s) 87, 842, 1407
SduI GDGCHC 4 cut(s) 252, 1289, 1406, 1470
SfaNI GCATC 1 cut(s) 1074
SinI GGWCC 1 cut(s) 176
SmiMI CAYNNNNRTG 3 cut(s) 188, 210, 1322
SmlI CTYRAG 2 cut(s) 383, 407
SmoI CTYRAG 2 cut(s) 383, 407
SpeI ACTAGT 1 cut(s) 476
Sse9I AATT 4 cut(s) 30, 140, 289, 1451
SsiI CCGC 2 cut(s) 568, 1177
SspMI CTAG 2 cut(s) 303, 477
StyD4I CCNGG 3 cut(s) 85, 840, 1405
StyI CCWWGG 2 cut(s) 126, 918
TaaI ACNGT 3 cut(s) 558, 895, 977
TaiI ACGT 3 cut(s) 709, 1164, 1286
TaqI TCGA 2 cut(s) 573, 1230
TasI AATT 4 cut(s) 30, 140, 289, 1451
Tru1I TTAA 2 cut(s) 138, 1113
Tru9I TTAA 2 cut(s) 138, 1113
TscAI CASTG 3 cut(s) 883, 1062, 1108
TseFI GTSAC 3 cut(s) 162, 456, 485
TseI GCWGC 3 cut(s) 949, 1087, 1292
Tsp45I GTSAC 3 cut(s) 162, 456, 485
TspDTI ATGAA 5 cut(s) 450, 594, 1142, 1216, 1439
TspGWI ACGGA 1 cut(s) 1019
TspRI CASTG 3 cut(s) 883, 1062, 1108
VpaK11BI GGWCC 1 cut(s) 176
XapI RAATTY 1 cut(s) 140
XbaI TCTAGA 1 cut(s) 302
XceI RCATGY 2 cut(s) 215, 1396
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XmnI GAANNNNTTC 1 cut(s) 611
XspI CTAG 2 cut(s) 303, 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.