Rh7BG039400

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
2519309 .. 2520808
1500 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG039400.1

Sequence Viewer

Length: 1500 bp
ATGGCTCTTGTTCTGTTGCCCATGTCAATGATTTTCATATTCCTTGCTTACAAACTTTATAACAAGCTGAGGTTCAAGCTTCCCCCAGGGCCATACCCATTGCCGATCATTGGAAACCTTTGCGCCATGGGTGCGGTTAAATCTCGGTGTTTTTTTGAGTGGTCACAAGTTTATGGTCCAATCATGTCTGTGTGGTTTGGTTCAAATTTGCACATAGTAGTCTCAAACCCAGAGTTGGCAAAGCAAGTGCTCAAAGACAATGATGAGCAATTAGCAAATAGGCACAAGAATTGGACACATTCTAGACTCAGCAGAAATGGCAAGGGTCTTATATGGGCTGATTATGGTCCTCACTACTCAAAGCTTAGGAAAGTTTGTGTGCTCGAGCTTTTCTCTACCAAGAGCCTTGAGACTTATAGACACATTAGGGAAGATGAAGTTAGAGCCATGGTCAAGTCAATTTTCAAAGATTGCACTAGTCCTTGTGACTATGGAAGAGGTTTAGTGGTCAAAAAGTATGTGGGAGCTGTGGCATTCAACAACATCACACGGCTACTGTTCGGACAGCGGTTCGGGAATGAAGATGGTGTGCTAAACAAGCTAGGGGCGGAGTTTGTGGCATGTCTGTCTAAAAAAGCAGAGCGTGGGGCATTTTTTGCTATTGTTCAAGAGATTTGGTGGCTTAGATGGGTTTTGTGGCCTCAACGTATAGGACTTGCTAAAATTTTGGCAGACGAAGACCAACTCAAACGAGCAATCATGGAGGAGCATATGCAAGGTAGCCAAGGTCAGGGCGAGAAGAAACATTTTCTGGGTGCATTGCTAAGTCTGGAGAAATATGATCTCACCCAGGATAATATTGGAGCATTACTTTGGGGAATGGTCAGTGCTGGCATGGATACAATTGCAATATCAGCTGAATGGGCCATGGCAGAGTTGATCAAGAACCCGACGGTGCAATGGAAGGCGCAAGAGGAGCTTGACCGCGTAATAGGGCTGGACCAGCCAGTGACAGAGGCGGATATTTCAAACCTTCCATACCTAAAATGTGTAGCCAAGGAGGCACTGAGGCTTCACCCTCCAACCCCATTAATGCTACCTCACAGAGCCAATGCCAATGTCAAGATTGGTGGCTACGACATTCCTAAGGGAACTGCTGTTCATGTAAACGTTTGGGCCATTGGGCGTGATCCGAAGGTGTGGCAAGACCCATACAGATTCCGACCTGAGAGATTCATCGAGACAAAGGAGCATGGTTTTGGGTTTCTGCCATTTGGTGCAGGAAGGCGTATGTGCCCAGCAGCACAAGTAGGCACCACCTTGGTCACACTAATGTTGGCTCACCTTTTGCATAGCTTTGCTTGGAGCTCGCCTGAAGGGCTCCAGCCGAAGGAGATCGACATGTCAGAGAGCCCGGGATTGGTATGCTATATGAAGACCCCTTTGATAGCAGTCCCTCGATTGAGATTGCCTGAGCACTTGTACAAGCATATGCTTTGA

Protein Analysis

499

Amino Acids

56.57

Weight (kDa)

9.19

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 28 - 475 6.9e-98 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
AccB1I GGYRCC 1 cut(s) 1313
AccII CGCG 1 cut(s) 987
AciI CCGC 5 cut(s) 134, 568, 608, 985, 1019
AclI AACGTT 1 cut(s) 1170
AclWI GGATC 1 cut(s) 1184
AcsI RAATTY 2 cut(s) 205, 723
AcuI CTGAAG 1 cut(s) 1395
AfaI GTAC 1 cut(s) 1484
AfiI CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1390, 1420
AflIII ACRYGT 1 cut(s) 1401
AgsI TTSAA 6 cut(s) 76, 204, 466, 538, 668, 1029
AhlI ACTAGT 1 cut(s) 476
AjnI CCWGG 2 cut(s) 85, 849
AloI GAACNNNNNNTCC 2 cut(s) 1143, 1175
Alw21I GWGCWC 4 cut(s) 252, 384, 1370, 1479
Alw26I GTCTC 3 cut(s) 226, 404, 1235
AlwI GGATC 1 cut(s) 1184
Ama87I CYCGRG 2 cut(s) 383, 1414
AoxI GGCC 4 cut(s) 89, 698, 924, 1176
ApeKI GCWGC 1 cut(s) 1301
ApoI RAATTY 2 cut(s) 205, 723
AseI ATTAAT 1 cut(s) 1091
AspLEI GCGC 2 cut(s) 125, 970
AspS9I GGNCC 6 cut(s) 89, 176, 347, 924, 1000, 1176
AsuC2I CCSGG 2 cut(s) 1415, 1416
AsuHPI GGTGA 3 cut(s) 838, 1067, 1334
AvaI CYCGRG 2 cut(s) 383, 1414
AvaII GGWCC 3 cut(s) 176, 347, 1000
AxyI CCTNAGG 1 cut(s) 1146
BaeGI GKGCMC 1 cut(s) 1298
BanI GGYRCC 1 cut(s) 1313
BanII GRGCYC 3 cut(s) 1370, 1383, 1415
BbsI GAAGAC 2 cut(s) 744, 1442
Bbv12I GWGCWC 4 cut(s) 252, 384, 1370, 1479
BbvCI CCTCAGC 1 cut(s) 68
BbvI GCAGC 1 cut(s) 1313
BccI CCATC 2 cut(s) 578, 681
BceAI ACGGC 1 cut(s) 566
BciT130I CCWGG 2 cut(s) 87, 851
BciVI GTATCC 1 cut(s) 892
BclI TGATCA 1 cut(s) 939
BcnI CCSGG 2 cut(s) 1415, 1416
BcoDI GTCTC 3 cut(s) 226, 404, 1235
BcuI ACTAGT 1 cut(s) 476
BfaI CTAG 3 cut(s) 303, 477, 602
BfuI GTATCC 1 cut(s) 892
BglI GCCNNNNNGGC 2 cut(s) 1061, 1378
BisI GCNGC 1 cut(s) 1302
BlsI GCNGC 1 cut(s) 1303
Bme1390I CCNGG 4 cut(s) 87, 851, 1415, 1416
Bme18I GGWCC 3 cut(s) 176, 347, 1000
BmeT110I CYCGRG 2 cut(s) 383, 1414
BmgT120I GGNCC 6 cut(s) 89, 176, 347, 924, 1000, 1176
BmiI GGNNCC 2 cut(s) 1315, 1382
BmrFI CCNGG 4 cut(s) 87, 851, 1415, 1416
BpiI GAAGAC 2 cut(s) 744, 1442
BplI GAGNNNNNCTC 2 cut(s) 377, 409
BpmI CTGGAG 2 cut(s) 851, 1367
Bpu10I CCTNAGC 3 cut(s) 68, 365, 1473
BpuEI CTTGAG 1 cut(s) 428
BpuMI CCSGG 2 cut(s) 1415, 1416
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1390, 1420
Bse1I ACTGG 1 cut(s) 1007
Bse21I CCTNAGG 1 cut(s) 1146
Bse3DI GCAATG 3 cut(s) 98, 818, 965
BseBI CCWGG 2 cut(s) 87, 851
BseLI CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1390, 1420
BseMI GCAATG 3 cut(s) 98, 818, 965
BseMII CTCAG 5 cut(s) 59, 322, 1058, 1218, 1464
BseNI ACTGG 1 cut(s) 1007
BseRI GAGGAG 2 cut(s) 779, 989
BseSI GKGCMC 1 cut(s) 1298
BseXI GCAGC 1 cut(s) 1313
BseYI CCCAGC 1 cut(s) 1297
BsgI GTGCAG 1 cut(s) 1299
Bsh1236I CGCG 1 cut(s) 987
BshFI GGCC 4 cut(s) 91, 700, 926, 1178
BshNI GGYRCC 1 cut(s) 1313
BsiHKAI GWGCWC 4 cut(s) 252, 384, 1370, 1479
BsiHKCI CYCGRG 2 cut(s) 383, 1414
BsiSI CCGG 1 cut(s) 1415
BslFI GGGAC 1 cut(s) 1439
BslI CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1390, 1420
BsmAI GTCTC 3 cut(s) 226, 404, 1235
BsmFI GGGAC 1 cut(s) 1439
BsmI GAATGC 1 cut(s) 533
BsnI GGCC 4 cut(s) 91, 700, 926, 1178
BsoBI CYCGRG 2 cut(s) 383, 1414
Bsp1286I GDGCHC 7 cut(s) 252, 384, 1298, 1370, 1383, 1415, 1479
Bsp1407I TGTACA 1 cut(s) 1482
Bsp143I GATC 5 cut(s) 105, 841, 939, 1189, 1395
Bsp19I CCATGG 3 cut(s) 126, 447, 927
BspACI CCGC 5 cut(s) 134, 568, 608, 985, 1019
BspANI GGCC 4 cut(s) 91, 700, 926, 1178
BspCNI CTCAG 5 cut(s) 60, 321, 1059, 1219, 1465
BspFNI CGCG 1 cut(s) 987
BspLI GGNNCC 2 cut(s) 1315, 1382
BspPI GGATC 1 cut(s) 1184
BspT107I GGYRCC 1 cut(s) 1313
BsrDI GCAATG 3 cut(s) 98, 818, 965
BsrGI TGTACA 1 cut(s) 1482
BsrI ACTGG 1 cut(s) 1007
BssMI GATC 5 cut(s) 105, 841, 939, 1189, 1395
BssT1I CCWWGG 6 cut(s) 126, 447, 784, 927, 1056, 1320
Bst2UI CCWGG 2 cut(s) 87, 851
Bst4CI ACNGT 2 cut(s) 558, 955
Bst6I CTCTTC 1 cut(s) 490
BstAPI GCANNNNNTGC 1 cut(s) 656
BstAUI TGTACA 1 cut(s) 1482
BstC8I GCNNGC 2 cut(s) 892, 1370
BstDEI CTNAG 9 cut(s) 68, 308, 365, 683, 824, 1067, 1146, 1227, 1473
BstDSI CCRYGG 3 cut(s) 126, 447, 927
BstFNI CGCG 1 cut(s) 987
BstHHI GCGC 2 cut(s) 125, 970
BstKTI GATC 5 cut(s) 108, 844, 942, 1192, 1398
BstMAI GTCTC 3 cut(s) 226, 404, 1235
BstMBI GATC 5 cut(s) 105, 841, 939, 1189, 1395
BstNI CCWGG 2 cut(s) 87, 851
BstNSI RCATGY 2 cut(s) 624, 1405
BstSCI CCNGG 4 cut(s) 85, 849, 1413, 1414
BstSLI GKGCMC 1 cut(s) 1298
BstUI CGCG 1 cut(s) 987
BstV1I GCAGC 1 cut(s) 1313
BstV2I GAAGAC 2 cut(s) 744, 1442
Bsu36I CCTNAGG 1 cut(s) 1146
BsuI GTATCC 1 cut(s) 892
BsuRI GGCC 4 cut(s) 91, 700, 926, 1178
BtgI CCRYGG 3 cut(s) 126, 447, 927
BtsIMutI CAGTG 3 cut(s) 892, 1014, 1064
Cac8I GCNNGC 2 cut(s) 892, 1370
CfoI GCGC 2 cut(s) 125, 970
Cfr13I GGNCC 6 cut(s) 89, 176, 347, 924, 1000, 1176
Cfr9I CCCGGG 1 cut(s) 1414
Csp6I GTAC 1 cut(s) 1483
CspCI CAANNNNNGTGG 2 cut(s) 1111, 1146
CviQI GTAC 1 cut(s) 1483
DdeI CTNAG 9 cut(s) 68, 308, 365, 683, 824, 1067, 1146, 1227, 1473
DpnI GATC 5 cut(s) 107, 843, 941, 1191, 1397
DpnII GATC 5 cut(s) 105, 841, 939, 1189, 1395
Eam1104I CTCTTC 1 cut(s) 490
EarI CTCTTC 1 cut(s) 490
EciI GGCGGA 2 cut(s) 623, 1034
Ecl136II GAGCTC 1 cut(s) 1368
Eco130I CCWWGG 6 cut(s) 126, 447, 784, 927, 1056, 1320
Eco24I GRGCYC 3 cut(s) 1370, 1383, 1415
Eco47I GGWCC 3 cut(s) 176, 347, 1000
Eco53kI GAGCTC 1 cut(s) 1368
Eco57I CTGAAG 1 cut(s) 1395
Eco81I CCTNAGG 1 cut(s) 1146
Eco88I CYCGRG 2 cut(s) 383, 1414
EcoICRI GAGCTC 1 cut(s) 1368
EcoRII CCWGG 2 cut(s) 85, 849
EcoT14I CCWWGG 6 cut(s) 126, 447, 784, 927, 1056, 1320
EcoT38I GRGCYC 3 cut(s) 1370, 1383, 1415
ErhI CCWWGG 6 cut(s) 126, 447, 784, 927, 1056, 1320
FalI AAGNNNNNCTT 2 cut(s) 963, 995
FaqI GGGAC 1 cut(s) 1439
FauNDI CATATG 2 cut(s) 771, 1491
FbaI TGATCA 1 cut(s) 939
Fnu4HI GCNGC 1 cut(s) 1302
FriOI GRGCYC 3 cut(s) 1370, 1383, 1415
Fsp4HI GCNGC 1 cut(s) 1302
FspBI CTAG 3 cut(s) 303, 477, 602
GlaI GCGC 2 cut(s) 124, 969
GluI GCNGC 1 cut(s) 1302
GsaI CCCAGC 1 cut(s) 1301
GsuI CTGGAG 2 cut(s) 851, 1367
HaeIII GGCC 4 cut(s) 91, 700, 926, 1178
HapII CCGG 1 cut(s) 1415
HhaI GCGC 2 cut(s) 125, 970
Hin6I GCGC 2 cut(s) 123, 968
HinP1I GCGC 2 cut(s) 123, 968
HindIII AAGCTT 2 cut(s) 77, 362
HinfI GANTC 3 cut(s) 306, 1218, 1233
HpaII CCGG 1 cut(s) 1415
HphI GGTGA 3 cut(s) 838, 1067, 1334
Hpy166II GTNNAC 1 cut(s) 1168
Hpy188I TCNGA 4 cut(s) 563, 1194, 1223, 1408
Hpy188III TCNNGA 7 cut(s) 303, 574, 668, 830, 943, 1123, 1240
Hpy8I GTNNAC 1 cut(s) 1168
Hpy99I CGWCG 1 cut(s) 955
HpyAV CCTTC 6 cut(s) 958, 1043, 1189, 1278, 1370, 1384
HpyCH4III ACNGT 2 cut(s) 558, 955
HpyCH4IV ACGT 2 cut(s) 706, 1170
HpyCH4V TGCA 8 cut(s) 211, 474, 775, 818, 908, 958, 1280, 1351
HpyF3I CTNAG 9 cut(s) 68, 308, 365, 683, 824, 1067, 1146, 1227, 1473
HpySE526I ACGT 2 cut(s) 706, 1170
HspAI GCGC 2 cut(s) 123, 968
Ksp22I TGATCA 1 cut(s) 939
Kzo9I GATC 5 cut(s) 105, 841, 939, 1189, 1395
LmnI GCTCC 7 cut(s) 524, 766, 863, 976, 1249, 1365, 1386
Lsp1109I GCAGC 1 cut(s) 1313
MaeI CTAG 3 cut(s) 303, 477, 602
MaeII ACGT 2 cut(s) 706, 1170
MaeIII GTNAC 4 cut(s) 162, 485, 1009, 1324
MalI GATC 5 cut(s) 107, 843, 941, 1191, 1397
MboI GATC 5 cut(s) 105, 841, 939, 1189, 1395
MboII GAAGA 6 cut(s) 443, 507, 593, 749, 811, 1447
MfeI CAATTG 1 cut(s) 903
MhlI GDGCHC 7 cut(s) 252, 384, 1298, 1370, 1383, 1415, 1479
MluCI AATT 6 cut(s) 205, 269, 289, 459, 723, 903
MlyI GAGTC 1 cut(s) 300
MmeI TCCRAC 2 cut(s) 1106, 1246
MseI TTAA 2 cut(s) 138, 1091
MslI CAYNNNNRTG 3 cut(s) 26, 188, 1331
MspA1I CMGCKG 2 cut(s) 568, 917
MspI CCGG 1 cut(s) 1415
MspR9I CCNGG 4 cut(s) 87, 851, 1415, 1416
MunI CAATTG 1 cut(s) 903
Mva1269I GAATGC 1 cut(s) 533
MvaI CCWGG 2 cut(s) 87, 851
MvnI CGCG 1 cut(s) 987
NciI CCSGG 2 cut(s) 1415, 1416
NcoI CCATGG 3 cut(s) 126, 447, 927
NdeI CATATG 2 cut(s) 771, 1491
NdeII GATC 5 cut(s) 105, 841, 939, 1189, 1395
NlaIV GGNNCC 2 cut(s) 1315, 1382
NmuCI GTSAC 4 cut(s) 162, 485, 1009, 1324
NspI RCATGY 2 cut(s) 624, 1405
PaeR7I CTCGAG 1 cut(s) 383
PasI CCCWGGG 1 cut(s) 86
PciI ACATGT 1 cut(s) 1401
PctI GAATGC 1 cut(s) 533
PfeI GAWTC 2 cut(s) 1218, 1233
PkrI GCNGC 1 cut(s) 1303
PleI GAGTC 1 cut(s) 300
PpsI GAGTC 1 cut(s) 300
PscI ACATGT 1 cut(s) 1401
PshBI ATTAAT 1 cut(s) 1091
PsiI TTATAA 1 cut(s) 60
Psp124BI GAGCTC 1 cut(s) 1370
Psp1406I AACGTT 1 cut(s) 1170
Psp6I CCWGG 2 cut(s) 85, 849
PspFI CCCAGC 1 cut(s) 1297
PspGI CCWGG 2 cut(s) 85, 849
PspN4I GGNNCC 2 cut(s) 1315, 1382
PspPI GGNCC 6 cut(s) 89, 176, 347, 924, 1000, 1176
PspXI VCTCGAGB 1 cut(s) 383
PvuII CAGCTG 1 cut(s) 917
RsaI GTAC 1 cut(s) 1484
RsaNI GTAC 1 cut(s) 1483
RseI CAYNNNNRTG 3 cut(s) 26, 188, 1331
SacI GAGCTC 1 cut(s) 1370
SaqAI TTAA 2 cut(s) 138, 1091
SatI GCNGC 1 cut(s) 1302
Sau3AI GATC 5 cut(s) 105, 841, 939, 1189, 1395
Sau96I GGNCC 6 cut(s) 89, 176, 347, 924, 1000, 1176
SchI GAGTC 1 cut(s) 300
ScrFI CCNGG 4 cut(s) 87, 851, 1415, 1416
SduI GDGCHC 7 cut(s) 252, 384, 1298, 1370, 1383, 1415, 1479
Sfr274I CTCGAG 1 cut(s) 383
SinI GGWCC 3 cut(s) 176, 347, 1000
SlaI CTCGAG 1 cut(s) 383
SmaI CCCGGG 1 cut(s) 1416
SmiMI CAYNNNNRTG 3 cut(s) 26, 188, 1331
SmlI CTYRAG 2 cut(s) 383, 407
SmoI CTYRAG 2 cut(s) 383, 407
SpeI ACTAGT 1 cut(s) 476
Sse9I AATT 6 cut(s) 205, 269, 289, 459, 723, 903
SsiI CCGC 5 cut(s) 134, 568, 608, 985, 1019
SspI AATATT 1 cut(s) 859
SspMI CTAG 3 cut(s) 303, 477, 602
SstI GAGCTC 1 cut(s) 1370
StyD4I CCNGG 4 cut(s) 85, 849, 1413, 1414
StyI CCWWGG 6 cut(s) 126, 447, 784, 927, 1056, 1320
TaaI ACNGT 2 cut(s) 558, 955
TaiI ACGT 2 cut(s) 709, 1173
TaqI TCGA 4 cut(s) 384, 1239, 1398, 1459
TasI AATT 6 cut(s) 205, 269, 289, 459, 723, 903
TatI WGTACW 1 cut(s) 1482
TfiI GAWTC 2 cut(s) 1218, 1233
Tru1I TTAA 2 cut(s) 138, 1091
Tru9I TTAA 2 cut(s) 138, 1091
TscAI CASTG 3 cut(s) 892, 1014, 1071
TseFI GTSAC 4 cut(s) 162, 485, 1009, 1324
TseI GCWGC 1 cut(s) 1301
Tsp45I GTSAC 4 cut(s) 162, 485, 1009, 1324
TspDTI ATGAA 6 cut(s) 25, 450, 594, 1151, 1225, 1448
TspMI CCCGGG 1 cut(s) 1414
TspRI CASTG 3 cut(s) 892, 1014, 1071
VpaK11BI GGWCC 3 cut(s) 176, 347, 1000
VspI ATTAAT 1 cut(s) 1091
XapI RAATTY 2 cut(s) 205, 723
XbaI TCTAGA 1 cut(s) 302
XceI RCATGY 2 cut(s) 624, 1405
XcmI CCANNNNNNNNNTGG 1 cut(s) 857
XhoI CTCGAG 1 cut(s) 383
XmaI CCCGGG 1 cut(s) 1414
XspI CTAG 3 cut(s) 303, 477, 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.