RchiOBHm_Chr7g0181041

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
2750794 .. 2752377
1584 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16147

Sequence Viewer

Length: 1512 bp
ATGGCTCTTGTTCTGTTGCCCATGTCAATGATTTTCATATTCCTTGCTTACAAACTTTATAACAAGCTGAGGTTCAAGCTTCCCCCAGGGCCATACCCATTGCCGATCATTGGAAACCTTTGCGCCATGGGTGCGGTTAAATCTCGGTGTTTTTTTGAGTGGTCACAAGTTTATGGTCCAATCATGTCTGTGTGGTTTGGTTCAAATTTGCACATAGTAGTCTCAAACCCAGAGTTGGCAAAGCAAGTGCTCAAAGACAATGATGAGCAATTAGCAAATAGGTACAAGAATTGGACACATTCTAGACTCAGCAGAAATGGCAAGGGTCTTATATGGGCTGATTATGGTCCTCACTACTCAAAGCTTAGGAAGGTTTGTGTGCTCGAGCTTTTCTCTACCAAGAGCCTTGAGACTTATAGACACATTAGGGAAGATGAAGTTAGAGCCATGGTCAAGTCAATTTTCAAAGATTGCACTAATCCTTGTGACTATGGAAGAGGTTTAGTGGTCAAAAAGTATGTGGGAGCTGTGGCATTCAACAACATCACACGGCTACTGTTCGGACAGCGGTTCGGGAATGAAGATGGTGTGCTAAACAAGCTAGGGGCGGAGTTTGTGGCAAGTCTGTCTAAAAAAGCAGAGCGTGGGGCATTTTTTGCTATTGTTCAAGAGATTTGGTGGCTTAGATGGGTTTTGTGGCCTCAACGTATAGGACTTGCTAAAATTTTGGCAGACGAAGACCAACTGAAACGAGCAATCATGGAGGAGCATATGCAAGGTAGCCAAGGTCAGGGCGAGAAGAAACATTTTCTGGCTGCATTGCTAAGTCTTCAAGAGAAACATGATCTCACCCAGGATAATATTGGAGCATTACTTTGGGGAATGGTCAGTGCTGGCATGGATACAATTGCAATATCAGCTGAATGGGCCATGGCAGAGTTGATCAAGAACCCGACGGTGCAATGGAAGGCGCAAGAGGAGCTTGACCGCGTAATAGGGCTGGACCGGACAGTGACAGAGGCGGATATTTCAAACCTTCCATACCTAAAATGTGTAGCCAAAGAGGCACTGAGGCTTCACCCTCCAACCCCATTAATGCTACCTCACAGAGCCAATGCCAATGTCAAGATTGGTGGCTACGACATTCCTAAGGGAACTGCTGTTCATGTAAACGTTTGGGCCATTGGGCGTGATCCGAAGGTGTGGCAAGACCCATACAGATTCCGACCTGAGAGATTCATCGAGACAAAGGAGCATGGTTTTGGCTTTCTGCCATTTGGTGCAGGAAGGCGTATGTGCCCAGCAGCACAAGTAGGCACCACCTTGGTCACACTAATGTTGGCTCACCTTTTGCATAGCTTTGCCTGGAGCTCGCCAGCCTCGCCTGAAGGGCTCCAGCCGAAGGAGATCGACATGTCAGAGAGCCCAGGATTGGTATGCTATATGAGGATCCCTTTGATAGCAGTCCCTCGATTGAGATTGCATCAGCACTTGTACAAGCATATGCTTTGA

Protein Analysis

503

Amino Acids

57.09

Weight (kDa)

9.33

Isoelectric Point (pI)

34.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 28 - 462 7.1e-98 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
AccB1I GGYRCC 1 cut(s) 1316
AccII CGCG 1 cut(s) 990
AciI CCGC 5 cut(s) 134, 568, 608, 988, 1022
AclI AACGTT 1 cut(s) 1173
AclWI GGATC 3 cut(s) 1187, 1444, 1457
AcsI RAATTY 2 cut(s) 205, 723
AcuI CTGAAG 1 cut(s) 1407
AfaI GTAC 2 cut(s) 284, 1496
AfiI CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1402, 1432
AflIII ACRYGT 1 cut(s) 1413
AgsI TTSAA 7 cut(s) 76, 204, 466, 538, 668, 833, 1032
AjnI CCWGG 4 cut(s) 85, 852, 1364, 1426
AloI GAACNNNNNNTCC 2 cut(s) 1146, 1178
Alw21I GWGCWC 3 cut(s) 252, 384, 1373
Alw26I GTCTC 3 cut(s) 226, 404, 1238
AlwI GGATC 3 cut(s) 1187, 1444, 1457
Ama87I CYCGRG 1 cut(s) 383
AoxI GGCC 4 cut(s) 89, 698, 927, 1179
ApeKI GCWGC 2 cut(s) 815, 1304
ApoI RAATTY 2 cut(s) 205, 723
AseI ATTAAT 1 cut(s) 1094
AspLEI GCGC 2 cut(s) 125, 973
AspS9I GGNCC 6 cut(s) 89, 176, 347, 927, 1003, 1179
AsuHPI GGTGA 3 cut(s) 841, 1070, 1337
AvaI CYCGRG 1 cut(s) 383
AvaII GGWCC 3 cut(s) 176, 347, 1003
AxyI CCTNAGG 1 cut(s) 1149
BaeGI GKGCMC 1 cut(s) 1301
BamHI GGATCC 1 cut(s) 1449
BanI GGYRCC 1 cut(s) 1316
BanII GRGCYC 3 cut(s) 1373, 1395, 1427
BbsI GAAGAC 2 cut(s) 744, 821
Bbv12I GWGCWC 3 cut(s) 252, 384, 1373
BbvCI CCTCAGC 1 cut(s) 68
BbvI GCAGC 2 cut(s) 802, 1316
BccI CCATC 2 cut(s) 578, 681
BceAI ACGGC 1 cut(s) 566
BciT130I CCWGG 4 cut(s) 87, 854, 1366, 1428
BciVI GTATCC 1 cut(s) 895
BclI TGATCA 1 cut(s) 942
BcoDI GTCTC 3 cut(s) 226, 404, 1238
BfaI CTAG 2 cut(s) 303, 602
BfuI GTATCC 1 cut(s) 895
BglI GCCNNNNNGGC 2 cut(s) 1064, 1390
BisI GCNGC 2 cut(s) 816, 1305
BlsI GCNGC 2 cut(s) 817, 1306
Bme1390I CCNGG 4 cut(s) 87, 854, 1366, 1428
Bme18I GGWCC 3 cut(s) 176, 347, 1003
BmeT110I CYCGRG 1 cut(s) 383
BmgT120I GGNCC 6 cut(s) 89, 176, 347, 927, 1003, 1179
BmiI GGNNCC 3 cut(s) 1318, 1394, 1451
BmrFI CCNGG 4 cut(s) 87, 854, 1366, 1428
BmsI GCATC 1 cut(s) 1492
BpiI GAAGAC 2 cut(s) 744, 821
BplI GAGNNNNNCTC 2 cut(s) 377, 409
BpmI CTGGAG 2 cut(s) 1379, 1387
Bpu10I CCTNAGC 2 cut(s) 68, 365
BpuEI CTTGAG 1 cut(s) 428
BsaJI CCNNGG 9 cut(s) 85, 86, 126, 447, 784, 852, 930, 1323, 1426
BsaWI WCCGGW 1 cut(s) 1005
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1402, 1432
Bse21I CCTNAGG 1 cut(s) 1149
Bse3DI GCAATG 3 cut(s) 98, 818, 968
BseBI CCWGG 4 cut(s) 87, 854, 1366, 1428
BseDI CCNNGG 9 cut(s) 85, 86, 126, 447, 784, 852, 930, 1323, 1426
BseLI CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1402, 1432
BseMI GCAATG 3 cut(s) 98, 818, 968
BseMII CTCAG 4 cut(s) 59, 322, 1061, 1221
BseRI GAGGAG 2 cut(s) 779, 992
BseSI GKGCMC 1 cut(s) 1301
BseXI GCAGC 2 cut(s) 802, 1316
BseYI CCCAGC 1 cut(s) 1300
BsgI GTGCAG 1 cut(s) 1302
Bsh1236I CGCG 1 cut(s) 990
BshFI GGCC 4 cut(s) 91, 700, 929, 1181
BshNI GGYRCC 1 cut(s) 1316
BsiHKAI GWGCWC 3 cut(s) 252, 384, 1373
BsiHKCI CYCGRG 1 cut(s) 383
BsiSI CCGG 1 cut(s) 1006
BslFI GGGAC 1 cut(s) 1451
BslI CCNNNNNNNGG 5 cut(s) 110, 235, 790, 1402, 1432
BsmAI GTCTC 3 cut(s) 226, 404, 1238
BsmFI GGGAC 1 cut(s) 1451
BsmI GAATGC 1 cut(s) 533
BsnI GGCC 4 cut(s) 91, 700, 929, 1181
BsoBI CYCGRG 1 cut(s) 383
Bsp1286I GDGCHC 6 cut(s) 252, 384, 1301, 1373, 1395, 1427
Bsp1407I TGTACA 1 cut(s) 1494
Bsp143I GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
Bsp19I CCATGG 3 cut(s) 126, 447, 930
BspACI CCGC 5 cut(s) 134, 568, 608, 988, 1022
BspANI GGCC 4 cut(s) 91, 700, 929, 1181
BspCNI CTCAG 4 cut(s) 60, 321, 1062, 1222
BspFNI CGCG 1 cut(s) 990
BspLI GGNNCC 3 cut(s) 1318, 1394, 1451
BspPI GGATC 3 cut(s) 1187, 1444, 1457
BspT107I GGYRCC 1 cut(s) 1316
BsrDI GCAATG 3 cut(s) 98, 818, 968
BsrGI TGTACA 1 cut(s) 1494
BssECI CCNNGG 9 cut(s) 85, 86, 126, 447, 784, 852, 930, 1323, 1426
BssMI GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
BssT1I CCWWGG 5 cut(s) 126, 447, 784, 930, 1323
Bst2UI CCWGG 4 cut(s) 87, 854, 1366, 1428
Bst4CI ACNGT 3 cut(s) 558, 958, 1012
Bst6I CTCTTC 1 cut(s) 490
BstAPI GCANNNNNTGC 1 cut(s) 656
BstAUI TGTACA 1 cut(s) 1494
BstC8I GCNNGC 3 cut(s) 895, 1373, 1377
BstDEI CTNAG 8 cut(s) 68, 308, 365, 683, 824, 1070, 1149, 1230
BstDSI CCRYGG 3 cut(s) 126, 447, 930
BstFNI CGCG 1 cut(s) 990
BstHHI GCGC 2 cut(s) 125, 973
BstKTI GATC 6 cut(s) 108, 847, 945, 1195, 1410, 1452
BstMAI GTCTC 3 cut(s) 226, 404, 1238
BstMBI GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
BstNI CCWGG 4 cut(s) 87, 854, 1366, 1428
BstNSI RCATGY 1 cut(s) 1417
BstSCI CCNGG 4 cut(s) 85, 852, 1364, 1426
BstSLI GKGCMC 1 cut(s) 1301
BstUI CGCG 1 cut(s) 990
BstV1I GCAGC 2 cut(s) 802, 1316
BstV2I GAAGAC 2 cut(s) 744, 821
BstX2I RGATCY 1 cut(s) 1449
BstYI RGATCY 1 cut(s) 1449
Bsu36I CCTNAGG 1 cut(s) 1149
BsuI GTATCC 1 cut(s) 895
BsuRI GGCC 4 cut(s) 91, 700, 929, 1181
BtgI CCRYGG 3 cut(s) 126, 447, 930
BtsIMutI CAGTG 3 cut(s) 895, 1017, 1067
Cac8I GCNNGC 3 cut(s) 895, 1373, 1377
CfoI GCGC 2 cut(s) 125, 973
Cfr13I GGNCC 6 cut(s) 89, 176, 347, 927, 1003, 1179
Csp6I GTAC 2 cut(s) 283, 1495
CspCI CAANNNNNGTGG 2 cut(s) 1114, 1149
CviQI GTAC 2 cut(s) 283, 1495
DdeI CTNAG 8 cut(s) 68, 308, 365, 683, 824, 1070, 1149, 1230
DpnI GATC 6 cut(s) 107, 846, 944, 1194, 1409, 1451
DpnII GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
Eam1104I CTCTTC 1 cut(s) 490
EarI CTCTTC 1 cut(s) 490
EciI GGCGGA 2 cut(s) 623, 1037
Ecl136II GAGCTC 1 cut(s) 1371
Eco130I CCWWGG 5 cut(s) 126, 447, 784, 930, 1323
Eco24I GRGCYC 3 cut(s) 1373, 1395, 1427
Eco47I GGWCC 3 cut(s) 176, 347, 1003
Eco53kI GAGCTC 1 cut(s) 1371
Eco57I CTGAAG 1 cut(s) 1407
Eco81I CCTNAGG 1 cut(s) 1149
Eco88I CYCGRG 1 cut(s) 383
EcoICRI GAGCTC 1 cut(s) 1371
EcoRII CCWGG 4 cut(s) 85, 852, 1364, 1426
EcoT14I CCWWGG 5 cut(s) 126, 447, 784, 930, 1323
EcoT38I GRGCYC 3 cut(s) 1373, 1395, 1427
ErhI CCWWGG 5 cut(s) 126, 447, 784, 930, 1323
FalI AAGNNNNNCTT 2 cut(s) 966, 998
FaqI GGGAC 1 cut(s) 1451
FauNDI CATATG 2 cut(s) 771, 1503
FbaI TGATCA 1 cut(s) 942
Fnu4HI GCNGC 2 cut(s) 816, 1305
FriOI GRGCYC 3 cut(s) 1373, 1395, 1427
Fsp4HI GCNGC 2 cut(s) 816, 1305
FspBI CTAG 2 cut(s) 303, 602
GlaI GCGC 2 cut(s) 124, 972
GluI GCNGC 2 cut(s) 816, 1305
GsaI CCCAGC 1 cut(s) 1304
GsuI CTGGAG 2 cut(s) 1379, 1387
HaeIII GGCC 4 cut(s) 91, 700, 929, 1181
HapII CCGG 1 cut(s) 1006
HhaI GCGC 2 cut(s) 125, 973
Hin6I GCGC 2 cut(s) 123, 971
HinP1I GCGC 2 cut(s) 123, 971
HindIII AAGCTT 2 cut(s) 77, 362
HinfI GANTC 3 cut(s) 306, 1221, 1236
HpaII CCGG 1 cut(s) 1006
HphI GGTGA 3 cut(s) 841, 1070, 1337
Hpy166II GTNNAC 1 cut(s) 1171
Hpy188I TCNGA 4 cut(s) 563, 1197, 1226, 1420
Hpy188III TCNNGA 7 cut(s) 303, 574, 668, 833, 946, 1126, 1243
Hpy8I GTNNAC 1 cut(s) 1171
Hpy99I CGWCG 1 cut(s) 958
HpyAV CCTTC 7 cut(s) 364, 961, 1046, 1192, 1281, 1382, 1396
HpyCH4III ACNGT 3 cut(s) 558, 958, 1012
HpyCH4IV ACGT 2 cut(s) 706, 1173
HpyCH4V TGCA 9 cut(s) 211, 474, 775, 818, 911, 961, 1283, 1354, 1483
HpyF3I CTNAG 8 cut(s) 68, 308, 365, 683, 824, 1070, 1149, 1230
HpySE526I ACGT 2 cut(s) 706, 1173
HspAI GCGC 2 cut(s) 123, 971
Ksp22I TGATCA 1 cut(s) 942
Kzo9I GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
LmnI GCTCC 7 cut(s) 524, 766, 866, 979, 1252, 1368, 1398
Lsp1109I GCAGC 2 cut(s) 802, 1316
LweI GCATC 1 cut(s) 1492
MaeI CTAG 2 cut(s) 303, 602
MaeII ACGT 2 cut(s) 706, 1173
MaeIII GTNAC 4 cut(s) 162, 485, 1012, 1327
MalI GATC 6 cut(s) 107, 846, 944, 1194, 1409, 1451
MboI GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
MboII GAAGA 6 cut(s) 443, 507, 593, 749, 811, 821
MfeI CAATTG 1 cut(s) 906
MflI RGATCY 1 cut(s) 1449
MhlI GDGCHC 6 cut(s) 252, 384, 1301, 1373, 1395, 1427
MluCI AATT 6 cut(s) 205, 269, 289, 459, 723, 906
MlyI GAGTC 1 cut(s) 300
MmeI TCCRAC 2 cut(s) 1109, 1249
MseI TTAA 2 cut(s) 138, 1094
MslI CAYNNNNRTG 3 cut(s) 26, 188, 1334
MspA1I CMGCKG 2 cut(s) 568, 920
MspI CCGG 1 cut(s) 1006
MspR9I CCNGG 4 cut(s) 87, 854, 1366, 1428
MunI CAATTG 1 cut(s) 906
Mva1269I GAATGC 1 cut(s) 533
MvaI CCWGG 4 cut(s) 87, 854, 1366, 1428
MvnI CGCG 1 cut(s) 990
NcoI CCATGG 3 cut(s) 126, 447, 930
NdeI CATATG 2 cut(s) 771, 1503
NdeII GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
NlaIV GGNNCC 3 cut(s) 1318, 1394, 1451
NmuCI GTSAC 4 cut(s) 162, 485, 1012, 1327
NspI RCATGY 1 cut(s) 1417
PaeR7I CTCGAG 1 cut(s) 383
PasI CCCWGGG 1 cut(s) 86
PciI ACATGT 1 cut(s) 1413
PctI GAATGC 1 cut(s) 533
PfeI GAWTC 2 cut(s) 1221, 1236
PkrI GCNGC 2 cut(s) 817, 1306
PleI GAGTC 1 cut(s) 300
PpsI GAGTC 1 cut(s) 300
PscI ACATGT 1 cut(s) 1413
PshBI ATTAAT 1 cut(s) 1094
PsiI TTATAA 1 cut(s) 60
Psp124BI GAGCTC 1 cut(s) 1373
Psp1406I AACGTT 1 cut(s) 1173
Psp6I CCWGG 4 cut(s) 85, 852, 1364, 1426
PspFI CCCAGC 1 cut(s) 1300
PspGI CCWGG 4 cut(s) 85, 852, 1364, 1426
PspN4I GGNNCC 3 cut(s) 1318, 1394, 1451
PspPI GGNCC 6 cut(s) 89, 176, 347, 927, 1003, 1179
PspXI VCTCGAGB 1 cut(s) 383
PsuI RGATCY 1 cut(s) 1449
PvuII CAGCTG 1 cut(s) 920
RsaI GTAC 2 cut(s) 284, 1496
RsaNI GTAC 2 cut(s) 283, 1495
RseI CAYNNNNRTG 3 cut(s) 26, 188, 1334
SacI GAGCTC 1 cut(s) 1373
SaqAI TTAA 2 cut(s) 138, 1094
SatI GCNGC 2 cut(s) 816, 1305
Sau3AI GATC 6 cut(s) 105, 844, 942, 1192, 1407, 1449
Sau96I GGNCC 6 cut(s) 89, 176, 347, 927, 1003, 1179
SchI GAGTC 1 cut(s) 300
ScrFI CCNGG 4 cut(s) 87, 854, 1366, 1428
SduI GDGCHC 6 cut(s) 252, 384, 1301, 1373, 1395, 1427
SfaNI GCATC 1 cut(s) 1492
Sfr274I CTCGAG 1 cut(s) 383
SinI GGWCC 3 cut(s) 176, 347, 1003
SlaI CTCGAG 1 cut(s) 383
SmiMI CAYNNNNRTG 3 cut(s) 26, 188, 1334
SmlI CTYRAG 2 cut(s) 383, 407
SmoI CTYRAG 2 cut(s) 383, 407
Sse9I AATT 6 cut(s) 205, 269, 289, 459, 723, 906
SsiI CCGC 5 cut(s) 134, 568, 608, 988, 1022
SspI AATATT 1 cut(s) 862
SspMI CTAG 2 cut(s) 303, 602
SstI GAGCTC 1 cut(s) 1373
StyD4I CCNGG 4 cut(s) 85, 852, 1364, 1426
StyI CCWWGG 5 cut(s) 126, 447, 784, 930, 1323
TaaI ACNGT 3 cut(s) 558, 958, 1012
TaiI ACGT 2 cut(s) 709, 1176
TaqI TCGA 4 cut(s) 384, 1242, 1410, 1471
TasI AATT 6 cut(s) 205, 269, 289, 459, 723, 906
TatI WGTACW 1 cut(s) 1494
TfiI GAWTC 2 cut(s) 1221, 1236
Tru1I TTAA 2 cut(s) 138, 1094
Tru9I TTAA 2 cut(s) 138, 1094
TscAI CASTG 3 cut(s) 895, 1017, 1074
TseFI GTSAC 4 cut(s) 162, 485, 1012, 1327
TseI GCWGC 2 cut(s) 815, 1304
Tsp45I GTSAC 4 cut(s) 162, 485, 1012, 1327
TspDTI ATGAA 5 cut(s) 25, 450, 594, 1154, 1228
TspRI CASTG 3 cut(s) 895, 1017, 1074
VpaK11BI GGWCC 3 cut(s) 176, 347, 1003
VspI ATTAAT 1 cut(s) 1094
XapI RAATTY 2 cut(s) 205, 723
XbaI TCTAGA 1 cut(s) 302
XceI RCATGY 1 cut(s) 1417
XcmI CCANNNNNNNNNTGG 1 cut(s) 860
XhoI CTCGAG 1 cut(s) 383
XspI CTAG 2 cut(s) 303, 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.