Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0003581

Physical Location & Seq

Genomic Coordinates Reverse (-)

6778449 .. 6782201

Gene Structure 3753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00390880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGACAGACAGACCACAGACACAGTTCTCACCAACCTTTGATTCCTTGCAATACACTCGCTGGCTCCTTCCGGCCTTTGCCAATTTCGAATATGACAATGGCTCTTCCTCCTCTCCCAGTTTCCATCTCATTCTCTGTTGTGATCCTGATAGTTGCATACAAGCTGTACCAGCGGCTCAGATTCAAGCTCCCCCAGGTCCACGTCCATGGCCGGTCGTCGGCAACCTCTACCACATTAAGCCGGTTCGGTTCCGGTGCTACGCAGAGTGGGCTCAGTCCTACGGACCCATCATATCGGTCTGGACCGGATCCACGCTGAACGTGGTCGTTTCCAACACAGAACTGGCAAGACAAGTGCTCAAAGACCAAGACCAGAAATTGGCCGACCGGCATCGCAACCGATCAGCCGCAAAGTTCAGCAAGGACGGTCAAGACCTCATCTGGGCCGACTATGGGCCCCACTATGTCAAGGTCAGGAAGGTCTGCACTCTTGAGCTTTTCTCTCCCAAGAGGATTGAGGCTCTCAGACCTATTCGGGAAGACGAGGTCACCGCCATGGTCGAGTCCATTTACAAATACTGTACCGATGCTGAAAACTCTGGAAAGGCCTTGTCAGTGAGGAAGTATGCGGGAGCAGTGGCTTTCAACAACATAACAAGGTTAGCATTTGGGAAACGATTTGTAAACTCAGAGGGTGTGATAGATGAACAAGGGCTAGAATTCAAGGCCGTTGTCGCCAATGGGCTCAAGCTCGGTGCATCGCTTGCCATGGCCGAGCATATTCCATGGCTGCGTTGGATGTTCCCACTGGAGGAGGAGGCATTTGCTCAGCATGGGGCACGGCGAGACCGACTCACTAGGGAAATCATGGAAGAGCACACACAGGCACGCAACAAAAGCGGTGGTGTTGCCAAGCAGCATTTTGTGGATGCCTTGCTTACCTTGCAGGACAAGTACGACCTTTCTGAGGATACTATTATTGGACTTCTTTGGGATATGATTACTGCAGGCATGGACACCACGGCGATTTCTCTTGAATGGGCCATGGCAGAGTTGATTAAGAACCCAAGGGTGCAACAAAAAGCCCAAGAGGAGCTAGACCGGGTCGTAGGGTTCGAACGTGTCATGACAGAAACCGATTTCTCGAGCCTCCCCTATCTACAATGTGTAGCCAAGGAAGCGCTCCGGATGCACCCTCCAACCCCACTGATGCTCCCCCACCGAGCCAATGCCAATGTCAAGATCGGCGGCTACGACATCCCCAAGGGTTCAAACGTACATGTGAACGTTTGGGCCGTTGCCCGTGACCCAGCAGTATGGAAGGATCCCCATGAGTTCCGACCCGAAAGGTTCCTAGAGGAGGATGTGGACATGAAGGGCCATGATTTTAGACTGCTTCCATTTGGAGCGGGACGACGGGTATGTCCCGGAGCCCAACTTGGTATCCAATTGGTGGAGTCCATGTTGGGCCATCTATTGCACCATTTCTGTTGGGCTCCTGCTGAAGGGGTGAATCCACAAGAGATTGACATGTCAGAAAGTCCAGGGCTTGTGACTTACATGAGAACCCCATTGCATGCTGTGCCTACGCCAAGGCTGCCATCGCACTTATACAAACGTCTGGCAGCTGAAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005783 GO:0005886 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009804 GO:0009805 GO:0009808 GO:0009809 GO:0009812 GO:0009813 GO:0009987 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0018130 GO:0019438 GO:0019748 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046409 GO:0046483 GO:0055114 GO:0071704 GO:0071944 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

545

Amino Acids

61.51

Weight (kDa)

6.43

Isoelectric Point (pI)

49.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	64 - 518	4.5e-104	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003581)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40890
fragaria_vesca	FvH4_1g29330 FvH4_5g15140
malus_domestica	MD08G1242900.v1.1 MD08G1243000.v1.1 MD14G1198300.v1.1 MD15G1436500.v1.1
prunus_persica	Prupe.1G580200_v2.0.a1 Prupe.1G580300_v2.0.a1 Prupe.1G580400_v2.0.a1 Prupe.1G580500_v2.0.a1 Prupe.5G191300_v2.0.a1
pyrus_communis	pycom08g21050 pycom08g21070 pycom15g38520 pycom15g38530
rosa_chinensis	RchiOBHm_Chr3g0494961 RchiOBHm_Chr7g0181041
rosa_laevigata	RLG00000005217 RLG00000022658
rosa_multiflora	Rmu_sc0003482.1_g000016 Rmu_sc0007079.1_g000002
rosa_roxburghii	Rroxscaffold_3G00272320 Rroxscaffold_6G00390880
rosa_rugosa	Rorug03G0268400 Rorug06G0438600
rosa_samantha	Rh3AG318000 Rh3BG352800 Rh3DG352100 Rh7AG040000 Rh7BG039400 Rh7CG041100 Rh7DG039600
rosa_wichuraiana	Rw3G027700 Rw7G003290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1422
AccB7I	CCANNNNNTGG	2 cut(s)	379, 1453
AccBSI	CCGCTC	1 cut(s)	1409
AccIII	TCCGGA	1 cut(s)	1185
AciI	CCGC	7 cut(s)	173, 408, 552, 629, 900, 1248, 1409
AclI	AACGTT	1 cut(s)	1287
AclWI	GGATC	5 cut(s)	137, 303, 316, 1319, 1332
AcoI	YGGCCR	3 cut(s)	209, 381, 771
AcsI	RAATTY	1 cut(s)	719
AcuI	CTGAAG	1 cut(s)	1524
AfaI	GTAC	4 cut(s)	168, 583, 956, 1278
AfeI	AGCGCT	1 cut(s)	1182
AfiI	CCNNNNNNNGG	9 cut(s)	218, 379, 442, 453, 811, 967, 1360, 1453, 1505
AflIII	ACRYGT	3 cut(s)	1120, 1279, 1530
AgsI	TTSAA	5 cut(s)	185, 646, 724, 1037, 1272
AjiI	CACGTC	1 cut(s)	203
AjnI	CCWGG	2 cut(s)	193, 1543
AjuI	GAANNNNNNNTTGG	2 cut(s)	25, 57
AluBI	AGCT	6 cut(s)	164, 188, 496, 751, 1096, 1628
AluI	AGCT	6 cut(s)	164, 188, 496, 751, 1096, 1628
Alw21I	GWGCWC	2 cut(s)	360, 879
Alw26I	GTCTC	1 cut(s)	840
AlwI	GGATC	5 cut(s)	137, 303, 316, 1319, 1332
Ama87I	CYCGRG	1 cut(s)	1144
Aor13HI	TCCGGA	1 cut(s)	1185
Aor51HI	AGCGCT	1 cut(s)	1182
ApaI	GGGCCC	1 cut(s)	459
ApeKI	GCWGC	4 cut(s)	790, 916, 1597, 1625
ApoI	RAATTY	1 cut(s)	719
AspLEI	GCGC	1 cut(s)	1183
AsuC2I	CCSGG	2 cut(s)	1103, 1428
AsuHPI	GGTGA	3 cut(s)	21, 541, 1522
AsuII	TTCGAA	2 cut(s)	87, 1116
AvaI	CYCGRG	1 cut(s)	1144
AvaII	GGWCC	3 cut(s)	197, 284, 303
BaeGI	GKGCMC	2 cut(s)	459, 841
BamHI	GGATCC	2 cut(s)	308, 1324
BanII	GRGCYC	5 cut(s)	274, 459, 747, 1435, 1498
BbsI	GAAGAC	1 cut(s)	546
Bbv12I	GWGCWC	2 cut(s)	360, 879
BbvI	GCAGC	3 cut(s)	777, 928, 1584
BccI	CCATC	4 cut(s)	132, 296, 1479, 1609
BceAI	ACGGC	4 cut(s)	713, 857, 1038, 1280
BcgI	CGANNNNNNTGC	2 cut(s)	38, 72
BciT130I	CCWGG	2 cut(s)	195, 1545
BciVI	GTATCC	2 cut(s)	964, 1454
BcnI	CCSGG	2 cut(s)	1103, 1428
BcoDI	GTCTC	1 cut(s)	840
BfaI	CTAG	4 cut(s)	716, 858, 1097, 1355
BfmI	CTRYAG	1 cut(s)	1005
BfoI	RGCGCY	1 cut(s)	1184
BfuI	GTATCC	2 cut(s)	964, 1454
BisI	GCNGC	7 cut(s)	174, 408, 791, 917, 1249, 1598, 1626
BlpI	GCTNAGC	1 cut(s)	828
BlsI	GCNGC	7 cut(s)	175, 409, 792, 918, 1250, 1599, 1627
Bme1390I	CCNGG	4 cut(s)	195, 1103, 1428, 1545
Bme18I	GGWCC	3 cut(s)	197, 284, 303
BmeT110I	CYCGRG	1 cut(s)	1144
BmgBI	CACGTC	1 cut(s)	203
BmrFI	CCNGG	4 cut(s)	195, 1103, 1428, 1545
BmrI	ACTGGG	1 cut(s)	111
BmsI	GCATC	6 cut(s)	400, 577, 767, 919, 1179, 1200
BmuI	ACTGGG	1 cut(s)	111
BpiI	GAAGAC	1 cut(s)	546
BplI	GAGNNNNNCTC	4 cut(s)	485, 517, 837, 869
BpmI	CTGGAG	1 cut(s)	830
Bpu1102I	GCTNAGC	1 cut(s)	828
Bpu14I	TTCGAA	2 cut(s)	87, 1116
BpuEI	CTTGAG	2 cut(s)	512, 731
BpuMI	CCSGG	2 cut(s)	1103, 1428
BsaI	GGTCTC	1 cut(s)	840
BsaWI	WCCGGW	3 cut(s)	252, 305, 1185
BsaXI	ACNNNNNCTCC	4 cut(s)	1197, 1227, 1448, 1478
Bsc4I	CCNNNNNNNGG	9 cut(s)	218, 379, 442, 453, 811, 967, 1360, 1453, 1505
Bse118I	RCCGGY	3 cut(s)	211, 241, 387
Bse1I	ACTGG	3 cut(s)	117, 348, 813
Bse3DI	GCAATG	1 cut(s)	1571
BseAI	TCCGGA	1 cut(s)	1185
BseBI	CCWGG	2 cut(s)	195, 1545
BseGI	GGATG	5 cut(s)	804, 934, 1194, 1257, 1369
BseLI	CCNNNNNNNGG	9 cut(s)	218, 379, 442, 453, 811, 967, 1360, 1453, 1505
BseMI	GCAATG	1 cut(s)	1571
BseMII	CTCAG	6 cut(s)	191, 287, 538, 702, 842, 957
BseNI	ACTGG	3 cut(s)	117, 348, 813
BseRI	GAGGAG	5 cut(s)	100, 827, 830, 1106, 1373
BseSI	GKGCMC	2 cut(s)	459, 841
BseXI	GCAGC	3 cut(s)	777, 928, 1584
BseYI	CCCAGC	1 cut(s)	1309
BsgI	GTGCAG	1 cut(s)	469
Bsh1285I	CGRYCG	2 cut(s)	216, 388
BsiEI	CGRYCG	2 cut(s)	216, 388
BsiHKAI	GWGCWC	2 cut(s)	360, 879
BsiHKCI	CYCGRG	1 cut(s)	1144
BsiSI	CCGG	9 cut(s)	71, 212, 242, 253, 306, 388, 1102, 1186, 1428
BslFI	GGGAC	2 cut(s)	1410, 1425
BslI	CCNNNNNNNGG	9 cut(s)	218, 379, 442, 453, 811, 967, 1360, 1453, 1505
BsmAI	GTCTC	1 cut(s)	840
BsmFI	GGGAC	2 cut(s)	1410, 1425
Bso31I	GGTCTC	1 cut(s)	840
BsoBI	CYCGRG	1 cut(s)	1144
Bsp119I	TTCGAA	2 cut(s)	87, 1116
Bsp120I	GGGCCC	1 cut(s)	455
Bsp1286I	GDGCHC	8 cut(s)	274, 360, 459, 747, 841, 879, 1435, 1498
Bsp13I	TCCGGA	1 cut(s)	1185
Bsp143I	GATC	5 cut(s)	142, 308, 401, 1242, 1324
Bsp1720I	GCTNAGC	1 cut(s)	828
Bsp19I	CCATGG	5 cut(s)	206, 555, 768, 785, 1044
BspACI	CCGC	7 cut(s)	173, 408, 552, 629, 900, 1248, 1409
BspCNI	CTCAG	6 cut(s)	190, 286, 537, 701, 841, 958
BspEI	TCCGGA	1 cut(s)	1185
BspHI	TCATGA	1 cut(s)	1125
BspMAI	CTGCAG	1 cut(s)	1009
BspPI	GGATC	5 cut(s)	137, 303, 316, 1319, 1332
BspQI	GCTCTTC	2 cut(s)	109, 867
BspT104I	TTCGAA	2 cut(s)	87, 1116
BspTNI	GGTCTC	1 cut(s)	840
BsrBI	CCGCTC	1 cut(s)	1409
BsrDI	GCAATG	1 cut(s)	1571
BsrFI	RCCGGY	3 cut(s)	211, 241, 387
BsrI	ACTGG	3 cut(s)	117, 348, 813
BssAI	RCCGGY	3 cut(s)	211, 241, 387
BssMI	GATC	5 cut(s)	142, 308, 401, 1242, 1324
BssT1I	CCWWGG	9 cut(s)	206, 555, 768, 785, 1044, 1067, 1173, 1263, 1592
Bst2UI	CCWGG	2 cut(s)	195, 1545
Bst4CI	ACNGT	3 cut(s)	24, 428, 581
Bst6I	CTCTTC	2 cut(s)	109, 867
BstAPI	GCANNNNNTGC	2 cut(s)	764, 1582
BstBI	TTCGAA	2 cut(s)	87, 1116
BstC8I	GCNNGC	5 cut(s)	62, 765, 889, 1009, 1578
BstDEI	CTNAG	6 cut(s)	177, 273, 524, 688, 828, 966
BstDSI	CCRYGG	6 cut(s)	206, 555, 768, 785, 1020, 1044
BstEII	GGTNACC	1 cut(s)	547
BstENI	CCTNNNNNAGG	3 cut(s)	965, 1358, 1503
BstF5I	GGATG	5 cut(s)	804, 934, 1194, 1257, 1369
BstH2I	RGCGCY	1 cut(s)	1184
BstHHI	GCGC	1 cut(s)	1183
BstKTI	GATC	5 cut(s)	145, 311, 404, 1245, 1327
BstMAI	GTCTC	1 cut(s)	840
BstMBI	GATC	5 cut(s)	142, 308, 401, 1242, 1324
BstMCI	CGRYCG	2 cut(s)	216, 388
BstNI	CCWGG	2 cut(s)	195, 1545
BstNSI	RCATGY	3 cut(s)	1283, 1534, 1580
BstPI	GGTNACC	1 cut(s)	547
BstSCI	CCNGG	4 cut(s)	193, 1101, 1426, 1543
BstSFI	CTRYAG	1 cut(s)	1005
BstSLI	GKGCMC	2 cut(s)	459, 841
BstV1I	GCAGC	3 cut(s)	777, 928, 1584
BstV2I	GAAGAC	1 cut(s)	546
BstX2I	RGATCY	2 cut(s)	308, 1324
BstXI	CCANNNNNNTGG	2 cut(s)	207, 1317
BstYI	RGATCY	2 cut(s)	308, 1324
BsuI	GTATCC	2 cut(s)	964, 1454
BtgI	CCRYGG	6 cut(s)	206, 555, 768, 785, 1020, 1044
BtgZI	GCGATG	3 cut(s)	377, 744, 1587
BtrI	CACGTC	1 cut(s)	203
BtsCI	GGATG	5 cut(s)	804, 934, 1194, 1257, 1369
BtsI	GCAGTG	1 cut(s)	642
BtsIMutI	CAGTG	4 cut(s)	621, 642, 806, 1205
Cac8I	GCNNGC	5 cut(s)	62, 765, 889, 1009, 1578
CciI	TCATGA	1 cut(s)	1125
CfoI	GCGC	1 cut(s)	1183
Cfr10I	RCCGGY	3 cut(s)	211, 241, 387
Csp6I	GTAC	4 cut(s)	167, 582, 955, 1277
CspCI	CAANNNNNGTGG	2 cut(s)	883, 918
CviQI	GTAC	4 cut(s)	167, 582, 955, 1277
DdeI	CTNAG	6 cut(s)	177, 273, 524, 688, 828, 966
DpnI	GATC	5 cut(s)	144, 310, 403, 1244, 1326
DpnII	GATC	5 cut(s)	142, 308, 401, 1242, 1324
DrdI	GACNNNNNNGTC	1 cut(s)	1422
DseDI	GACNNNNNNGTC	1 cut(s)	1422
EaeI	YGGCCR	3 cut(s)	209, 381, 771
Eam1104I	CTCTTC	2 cut(s)	109, 867
EarI	CTCTTC	2 cut(s)	109, 867
Eco130I	CCWWGG	9 cut(s)	206, 555, 768, 785, 1044, 1067, 1173, 1263, 1592
Eco147I	AGGCCT	1 cut(s)	608
Eco24I	GRGCYC	5 cut(s)	274, 459, 747, 1435, 1498
Eco31I	GGTCTC	1 cut(s)	840
Eco47I	GGWCC	3 cut(s)	197, 284, 303
Eco47III	AGCGCT	1 cut(s)	1182
Eco57I	CTGAAG	1 cut(s)	1524
Eco88I	CYCGRG	1 cut(s)	1144
Eco91I	GGTNACC	1 cut(s)	547
EcoNI	CCTNNNNNAGG	3 cut(s)	965, 1358, 1503
EcoO109I	RGGNCCY	1 cut(s)	456
EcoO65I	GGTNACC	1 cut(s)	547
EcoRI	GAATTC	1 cut(s)	719
EcoRII	CCWGG	2 cut(s)	193, 1543
EcoT14I	CCWWGG	9 cut(s)	206, 555, 768, 785, 1044, 1067, 1173, 1263, 1592
EcoT38I	GRGCYC	5 cut(s)	274, 459, 747, 1435, 1498
ErhI	CCWWGG	9 cut(s)	206, 555, 768, 785, 1044, 1067, 1173, 1263, 1592
FaqI	GGGAC	2 cut(s)	1410, 1425
FauI	CCCGC	2 cut(s)	622, 1402
Fnu4HI	GCNGC	7 cut(s)	174, 408, 791, 917, 1249, 1598, 1626
FokI	GGATG	5 cut(s)	811, 941, 1201, 1244, 1376
FriOI	GRGCYC	5 cut(s)	274, 459, 747, 1435, 1498
Fsp4HI	GCNGC	7 cut(s)	174, 408, 791, 917, 1249, 1598, 1626
FspBI	CTAG	4 cut(s)	716, 858, 1097, 1355
GlaI	GCGC	1 cut(s)	1182
GluI	GCNGC	7 cut(s)	174, 408, 791, 917, 1249, 1598, 1626
GsaI	CCCAGC	1 cut(s)	1313
GsuI	CTGGAG	1 cut(s)	830
HaeII	RGCGCY	1 cut(s)	1184
HapII	CCGG	9 cut(s)	71, 212, 242, 253, 306, 388, 1102, 1186, 1428
HhaI	GCGC	1 cut(s)	1183
Hin6I	GCGC	1 cut(s)	1181
HinP1I	GCGC	1 cut(s)	1181
HinfI	GANTC	6 cut(s)	41, 181, 563, 852, 1457, 1513
HpaII	CCGG	9 cut(s)	71, 212, 242, 253, 306, 388, 1102, 1186, 1428
HphI	GGTGA	3 cut(s)	21, 541, 1522
Hpy166II	GTNNAC	4 cut(s)	200, 685, 1285, 1369
Hpy188I	TCNGA	6 cut(s)	180, 527, 691, 967, 1340, 1537
Hpy8I	GTNNAC	4 cut(s)	200, 685, 1285, 1369
Hpy99I	CGWCG	2 cut(s)	221, 1419
HpyAV	CCTTC	5 cut(s)	77, 472, 1315, 1369, 1499
HpyCH4III	ACNGT	3 cut(s)	24, 428, 581
HpyCH4IV	ACGT	6 cut(s)	202, 321, 1120, 1275, 1287, 1618
HpyF3I	CTNAG	6 cut(s)	177, 273, 524, 688, 828, 966
HpySE526I	ACGT	6 cut(s)	202, 321, 1120, 1275, 1287, 1618
HspAI	GCGC	1 cut(s)	1181
Kpn2I	TCCGGA	1 cut(s)	1185
Kzo9I	GATC	5 cut(s)	142, 308, 401, 1242, 1324
LguI	GCTCTTC	2 cut(s)	109, 867
LmnI	GCTCC	9 cut(s)	69, 193, 632, 1093, 1188, 1218, 1406, 1430, 1501
Lsp1109I	GCAGC	3 cut(s)	777, 928, 1584
LweI	GCATC	6 cut(s)	400, 577, 767, 919, 1179, 1200
MaeI	CTAG	4 cut(s)	716, 858, 1097, 1355
MaeII	ACGT	6 cut(s)	202, 321, 1120, 1275, 1287, 1618
MaeIII	GTNAC	3 cut(s)	547, 1304, 1552
MalI	GATC	5 cut(s)	144, 310, 403, 1244, 1326
MbiI	CCGCTC	1 cut(s)	1409
MboI	GATC	5 cut(s)	142, 308, 401, 1242, 1324
MboII	GAAGA	3 cut(s)	96, 551, 884
MfeI	CAATTG	1 cut(s)	1448
MflI	RGATCY	2 cut(s)	308, 1324
MhlI	GDGCHC	8 cut(s)	274, 360, 459, 747, 841, 879, 1435, 1498
MluCI	AATT	4 cut(s)	82, 377, 719, 1448
MlyI	GAGTC	3 cut(s)	572, 846, 1466
MmeI	TCCRAC	4 cut(s)	357, 776, 1223, 1363
MroI	TCCGGA	1 cut(s)	1185
MseI	TTAA	2 cut(s)	237, 1059
MslI	CAYNNNNRTG	2 cut(s)	205, 554
MspA1I	CMGCKG	2 cut(s)	173, 1628
MspI	CCGG	9 cut(s)	71, 212, 242, 253, 306, 388, 1102, 1186, 1428
MspR9I	CCNGG	4 cut(s)	195, 1103, 1428, 1545
MunI	CAATTG	1 cut(s)	1448
MvaI	CCWGG	2 cut(s)	195, 1545
NciI	CCSGG	2 cut(s)	1103, 1428
NcoI	CCATGG	5 cut(s)	206, 555, 768, 785, 1044
NdeII	GATC	5 cut(s)	142, 308, 401, 1242, 1324
NmeAIII	GCCGAG	1 cut(s)	799
NmuCI	GTSAC	3 cut(s)	547, 1304, 1552
NspI	RCATGY	3 cut(s)	1283, 1534, 1580
NspV	TTCGAA	2 cut(s)	87, 1116
PaeI	GCATGC	1 cut(s)	1580
PaeR7I	CTCGAG	1 cut(s)	1144
PagI	TCATGA	1 cut(s)	1125
PceI	AGGCCT	1 cut(s)	608
PciI	ACATGT	2 cut(s)	1279, 1530
PciSI	GCTCTTC	2 cut(s)	109, 867
PcsI	WCGNNNNNNNCGW	4 cut(s)	847, 1113, 1251, 1293
PfeI	GAWTC	3 cut(s)	41, 181, 1513
PflFI	GACNNNGTC	2 cut(s)	545, 1103
PflMI	CCANNNNNTGG	2 cut(s)	379, 1453
PfoI	TCCNGGA	1 cut(s)	1426
PkrI	GCNGC	7 cut(s)	175, 409, 792, 918, 1250, 1599, 1627
PleI	GAGTC	3 cut(s)	571, 846, 1465
PpsI	GAGTC	3 cut(s)	571, 846, 1465
PscI	ACATGT	2 cut(s)	1279, 1530
Psp1406I	AACGTT	1 cut(s)	1287
Psp6I	CCWGG	2 cut(s)	193, 1543
PspEI	GGTNACC	1 cut(s)	547
PspFI	CCCAGC	1 cut(s)	1309
PspGI	CCWGG	2 cut(s)	193, 1543
PspOMI	GGGCCC	1 cut(s)	455
PstI	CTGCAG	1 cut(s)	1009
PsuI	RGATCY	2 cut(s)	308, 1324
PsyI	GACNNNGTC	2 cut(s)	545, 1103
PvuII	CAGCTG	1 cut(s)	1628
RsaI	GTAC	4 cut(s)	168, 583, 956, 1278
RsaNI	GTAC	4 cut(s)	167, 582, 955, 1277
RseI	CAYNNNNRTG	2 cut(s)	205, 554
SapI	GCTCTTC	2 cut(s)	109, 867
SaqAI	TTAA	2 cut(s)	237, 1059
SatI	GCNGC	7 cut(s)	174, 408, 791, 917, 1249, 1598, 1626
Sau3AI	GATC	5 cut(s)	142, 308, 401, 1242, 1324
SchI	GAGTC	3 cut(s)	572, 846, 1466
ScrFI	CCNGG	4 cut(s)	195, 1103, 1428, 1545
SduI	GDGCHC	8 cut(s)	274, 360, 459, 747, 841, 879, 1435, 1498
SfaNI	GCATC	6 cut(s)	400, 577, 767, 919, 1179, 1200
SfcI	CTRYAG	1 cut(s)	1005
Sfr274I	CTCGAG	1 cut(s)	1144
SfuI	TTCGAA	2 cut(s)	87, 1116
SinI	GGWCC	3 cut(s)	197, 284, 303
SlaI	CTCGAG	1 cut(s)	1144
SmiMI	CAYNNNNRTG	2 cut(s)	205, 554
SmlI	CTYRAG	3 cut(s)	491, 746, 1144
SmoI	CTYRAG	3 cut(s)	491, 746, 1144
SphI	GCATGC	1 cut(s)	1580
Sse9I	AATT	4 cut(s)	82, 377, 719, 1448
SseBI	AGGCCT	1 cut(s)	608
SsiI	CCGC	7 cut(s)	173, 408, 552, 629, 900, 1248, 1409
SspMI	CTAG	4 cut(s)	716, 858, 1097, 1355
StuI	AGGCCT	1 cut(s)	608
StyD4I	CCNGG	4 cut(s)	193, 1101, 1426, 1543
StyI	CCWWGG	9 cut(s)	206, 555, 768, 785, 1044, 1067, 1173, 1263, 1592
TaaI	ACNGT	3 cut(s)	24, 428, 581
TaiI	ACGT	6 cut(s)	205, 324, 1123, 1278, 1290, 1621
TaqI	TCGA	4 cut(s)	87, 561, 1116, 1145
TaqII	GACCGA	2 cut(s)	286, 864
TasI	AATT	4 cut(s)	82, 377, 719, 1448
TauI	GCSGC	3 cut(s)	176, 410, 1251
TfiI	GAWTC	3 cut(s)	41, 181, 1513
Tru1I	TTAA	2 cut(s)	237, 1059
Tru9I	TTAA	2 cut(s)	237, 1059
TscAI	CASTG	4 cut(s)	621, 642, 813, 1212
TseFI	GTSAC	3 cut(s)	547, 1304, 1552
TseI	GCWGC	4 cut(s)	790, 916, 1597, 1625
Tsp45I	GTSAC	3 cut(s)	547, 1304, 1552
TspDTI	ATGAA	2 cut(s)	720, 1388
TspGWI	ACGGA	1 cut(s)	297
TspRI	CASTG	4 cut(s)	621, 642, 813, 1212
Tth111I	GACNNNGTC	2 cut(s)	545, 1103
Van91I	CCANNNNNTGG	2 cut(s)	379, 1453
VpaK11BI	GGWCC	3 cut(s)	197, 284, 303
XagI	CCTNNNNNAGG	3 cut(s)	965, 1358, 1503
XapI	RAATTY	1 cut(s)	719
XceI	RCATGY	3 cut(s)	1283, 1534, 1580
XcmI	CCANNNNNNNNNTGG	3 cut(s)	319, 340, 792
XhoI	CTCGAG	1 cut(s)	1144
XspI	CTAG	4 cut(s)	716, 858, 1097, 1355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.