FvH4_5g15460

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
8741159 .. 8744400
3242 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15460.t1

Sequence Viewer

Length: 3168 bp
ATGACTGTGTCGTTTCAGCAACCCCCACCTCCCCAATCCCAATCCCAATCCCAATCCCAACCCCAACCACAACCCCAGCCCCAACCAGAGCAGCCACCGCAACCGCAACAGCCACATCAGCCGCAGAGGACGATCAGGAAGCTCATTGTGGAAGTGATCGACGCACGTGACCTTCTACCTAAAGATGGCCAGGGCAGCTCCAGCGCTTACGTGGTGGCGGACTTCGACGGGCAGCGGAAGCGGACGGCGACCAAGTGCAAGGACCTCAACCCGGTCTGGAACGAGCCGCTCGAGTTCGTCGTCTCCGACCCGGACAACATGGACTACGAGGAGCTCGAGATCGAGGTCCTCAACGACAAGCGCTACGGCAACAGCGGCACCGCGCGTAAGAACCACTTCCTCGGGCGCGTCAAGCTCTACGGCACTCAGTTCTCCAAGCGCGGCGACGAGGGCTTGGTCTATTTCCAGCTCGAGAAGAAGAGCGTCTTCAGCTGGATCAGAGGCGAAATCGGCCTAAGAATTTACTACTACGACGAGCTAGTCGACGAGGCTCCGCCGCCGCCGCAGCAACCCCCGCCGCAGGAGGATCCTCCGCCGGAGCAGCCGGCGGTGATGGTGGTCGAGGAAGGGAGGGTGTTTGAGGTCCCCGGAGGACACGTGGAGTGTACTAGAATCCACGACGGCTCGTACTCGCCGCCGGTTGTTGTGATGGAGCAACCGCCGCCGCAGATGGTGCATATGCACTCCGAGCCGCCGGGACAGGAAATGCACGGTCATCCGCCGCCGCAGGAGGTTCGTTTTCAACCGGAGGTGAGGAAAATGGAGACTCACCGAGTTGCTCCGATGGGGGAGAGAGTGAGAATTCCCAGGAGGCCGAACTGCGACTACTCTCCGAAAGTGATTTCCGGAAAGTTTGGGGCGGAGAACACCGCGGAGAGGATTCACCCCTGTGAGCTCGTCGAGCCTATGCAGTACTTGTTCACCAGAATCGTCAAGGCGCGTGGCCTCGCGCCGAACGAGAGCCCCTACGTAAAACTCCGTACATCCAGCCACCTCGTCAAGTCGAAAACCGCGGTTCACCGCCCCGGAGAGCCGACCGACTCGCCGGAGTGGAACCAGGTCTTCGCACTCGCTCACAACCGGCCTGACTCAGTGAGTTCGACATTGGAGATCTCCGTGCGTGACTCGCCGTCGGAGCAGTTCTTAGGCGGCATTATCTTCGACCTCTCCGACGTGCCGGTTCGAGACCCGCCGGACAGTCCTCTTGCTCCGCAGTGGTACAGACTAGAAGGCGGCGCCGGTGATCAAAATTCCGGTAAAGTCTCCGGCGATATCCAGCTCTCTGTTTGGATTGGGACACAAGCCGATGACGCTTTCCCTGAAGCGTGGAGCTCCGAGGCCCCTAACGTGTCCCACACGCGCTCCAAGGTGTACCAGTCCCCGAAGCTCTGGTATCTGAGAACGACGGTTATGGAGGTTCAAGACCTCCACATTGCATCGAATCTACCTCCCTTAACGACCCCTGAGATTCGAGTCAAGGCTCAGCTGGGGACTCAGTCGGCTCGGACCAGGCGCGGGTGCATGAACAACCACTGCGCCTCGTTTCACTGGAACGAGGACCTCATCTTCGTGGCGGGTGAACCACTAGAGGACTCACTGATTCTCTTGGTGGAGGACCGCACCAACAAGGATCCGGTACTCCTCGGCCACATCGTTATTCCGGTGAGCTCCATCGAGCAGCGAATCGACGAGCGCTACGTGGCGTCGAAATGGCTCCCTCTTGAAGGCAGAGGAGGAGGCGGGCCCTACAGCGGCAGAATCCATCTACGGCTTTGCTTGGAGGGAGGGTATCACGTGCTGGATGAAGCGGCGCACGTGTGCAGCGACTTCCGACCCACGGCAAAGCAGCTGTGGAAGCCGGCCGTGGGAATTTTGGAACTTGGGATTCTCGGCGCGCGCGGCTTGCTTCCGATGAAGGCGAAATCCGGTGGGAAGGGGTCCACGGATGCTTACTGTGTGGCCAAGTATGGGAAGAAATGGGTCAGGACCCGGACCATTACGGACGGCTTCGACCCGCGCTGGAACGAGCAGTACACGTGGCAAGTATACGACCCCTGCACGGTGCTCACCATCGGCGTGTTTGACAACTGGCGCATGTTTGCTGACGCTTCAGAGGAAAAGCAAGACTTCCGTATTGGAAAAATACGAATACGTATCTCTACGCTGGAGAGCAACAAGGTGTACAAGAATTCATACCCGTTAATGGTGTTGTCCCGGACCGGGTTAAAGAAAATGGGGGAGATAGAGCTAGCGGTCAGGTTCGCCTGCCCGTCGTTGCTGCCCGAGACATGCGCGGTTTACGGGCAGCCATTGCTTCCGAGAATGCACTACCTCCGCCCTCTCGGGGTGGCCCAGCAGGAAGCGCTGCGAGGGGCAGCCACGCGCATGGTGGCCGCGTGGCTTGCACGCTCCGAGCCGCCTTTGGGGACGGAGGTGGTGCGGTACATGCTGGATGCTGACTCGCACACGTGGAGCATGAGGAAGAGCAAAGCGAATTGGTTCCGGATCGTGGCGGTGCTGGCATGGGCGGTCGGGTTAGCTAAATGGTTGGATGATATAAGGAGGTGGAGGAATCCGGTGACGACGGTTTTGGTGCACGTGTTGTATTTGGTTCTGGTTTGGTACCCGGATTTGATAGTCCCGACCGGGTTTCTATACGTGTTTCTTATTGGGGTTTGGTACTACCGGTTCAGGCCCAAGATACCAGCCGGAATGGACCTCCGTCTCTCCCAGGCGGATACGGTCGACCCGGATGAGCTAGATGAAGAATTCGACACTTTTCCGAGCTCAAAGTCGCCGGATGTCATTCGGGTCCGGTATGACCGGTTGAGAATGCTGGCGGCCCGGGTCCAAACAGTTTTGGGCGATTTTGCGACCCAAGGAGAACGGGCCCAGGCCCTTGTGAGCTGGAGGGACCCACGTGCTACAAAGTTGTTCATTGGAGTGTGCTTGCTTATCACTGTGGTGCTATATACTGTGCCACCCAAAATGGTGGCTGTGGCATTGGGGTTTTACTACCTGCGCCACCCTATGTTCCGAGAGCCAATGCCGCCGGCGAGCCTCAACTTTTTCCGGAGGCTTCCGAGCCTGTCGGACCGGTTAATGTAG

Protein Analysis

1056

Amino Acids

119.39

Weight (kDa)

7.61

Isoelectric Point (pI)

55.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 47 - 140 2.2e-17 C2 domain
C2 PF00168 325 - 429 4.6e-08 C2 domain
C2 PF00168 485 - 594 1.9e-06 C2 domain
C2 PF00168 643 - 754 7.8e-19 C2 domain
PRT_C PF08372 900 - 1055 2.2e-72 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015951)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74720
fragaria_vesca FvH4_5g15460
malus_domestica MD06G1188400.v1.1
prunus_persica Prupe.5G186600_v2.0.a1
pyrus_communis pycom06g16700
rosa_chinensis RchiOBHm_Chr7g0180621
rosa_laevigata RLG00000005249
rosa_multiflora Rmu_co8415707.1_g000001
rosa_roxburghii Rroxscaffold_3G00272730
rosa_rugosa Rorug06G0434600
rosa_samantha Rh7AG035700 Rh7BG035600 Rh7CG037300 Rh7DG035900
rosa_wichuraiana Rw7G002940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 539
Acc36I ACCTGC 1 cut(s) 3087
Acc65I GGTACC 1 cut(s) 2682
AccB1I GGYRCC 3 cut(s) 377, 1295, 2682
AccBSI CCGCTC 1 cut(s) 289
AccI GTMKAC 3 cut(s) 543, 2106, 2805
AccIII TCCGGA 3 cut(s) 905, 2562, 3132
AclWI GGATC 6 cut(s) 503, 581, 594, 1685, 1698, 2573
AcoI YGGCCR 5 cut(s) 187, 1705, 1920, 2019, 2451
AcsI RAATTY 6 cut(s) 519, 861, 1309, 1929, 2248, 2828
AcuI CTGAAG 3 cut(s) 472, 1401, 2154
AcvI CACGTG 8 cut(s) 167, 658, 1855, 1876, 2097, 2529, 2659, 2981
AcyI GRCGYC 2 cut(s) 1296, 1763
AfeI AGCGCT 4 cut(s) 205, 362, 1754, 2424
AflIII ACRYGT 7 cut(s) 655, 1407, 1875, 2094, 2526, 2658, 2718
AgeI ACCGGT 3 cut(s) 2745, 2883, 3156
AgsI TTSAA 3 cut(s) 803, 1481, 1784
AhdI GACNNNNNGTC 1 cut(s) 1189
AjiI CACGTC 1 cut(s) 1234
AjnI CCWGG 6 cut(s) 189, 866, 1116, 1568, 2790, 2952
AleI CACNNNNGTG 2 cut(s) 948, 3023
Alw21I GWGCWC 7 cut(s) 336, 957, 1394, 1730, 2127, 2658, 2849
Alw26I GTCTC 6 cut(s) 307, 818, 1239, 1327, 2339, 2789
Alw44I GTGCAC 1 cut(s) 2654
AlwI GGATC 6 cut(s) 503, 581, 594, 1685, 1698, 2573
Ama87I CYCGRG 7 cut(s) 290, 335, 401, 470, 2342, 2402, 2904
Aor13HI TCCGGA 3 cut(s) 905, 2562, 3132
Aor51HI AGCGCT 4 cut(s) 205, 362, 1754, 2424
ApaI GGGCCC 2 cut(s) 1806, 2953
ApaLI GTGCAC 1 cut(s) 2654
ApoI RAATTY 6 cut(s) 519, 861, 1309, 1929, 2248, 2828
ArsI GACNNNNNNTTYG 4 cut(s) 1610, 1642, 2632, 2664
AsiGI ACCGGT 3 cut(s) 2745, 2883, 3156
Asp700I GAANNNNTTC 2 cut(s) 395, 2558
Asp718I GGTACC 1 cut(s) 2682
AsuNHI GCTAGC 1 cut(s) 2308
AvaI CYCGRG 7 cut(s) 290, 335, 401, 470, 2342, 2402, 2904
BaeGI GKGCMC 3 cut(s) 1806, 2658, 2953
BalI TGGCCA 2 cut(s) 189, 2021
BamHI GGATCC 2 cut(s) 586, 1690
BanI GGYRCC 3 cut(s) 377, 1295, 2682
BanII GRGCYC 8 cut(s) 336, 957, 1025, 1394, 1730, 1806, 2849, 2953
BbrPI CACGTG 8 cut(s) 167, 658, 1855, 1876, 2097, 2529, 2659, 2981
BbsI GAAGAC 2 cut(s) 478, 1114
Bbv12I GWGCWC 7 cut(s) 336, 957, 1394, 1730, 2127, 2658, 2849
BccI CCATC 8 cut(s) 179, 607, 703, 724, 838, 1739, 1830, 2138
BceAI ACGGC 9 cut(s) 261, 382, 436, 697, 1174, 1844, 1907, 1914, 2080
BcgI CGANNNNNNTGC 4 cut(s) 776, 810, 1201, 1235
BciT130I CCWGG 6 cut(s) 191, 868, 1118, 1570, 2792, 2954
BciVI GTATCC 1 cut(s) 2791
BclI TGATCA 1 cut(s) 1303
BcoDI GTCTC 6 cut(s) 307, 818, 1239, 1327, 2339, 2789
BfaI CTAG 6 cut(s) 539, 669, 1286, 1646, 2309, 2819
BfmI CTRYAG 1 cut(s) 1807
BfoI RGCGCY 5 cut(s) 207, 364, 1299, 1756, 2426
BfuAI ACCTGC 1 cut(s) 3087
BfuI GTATCC 1 cut(s) 2791
BglII AGATCT 1 cut(s) 1170
BlpI GCTNAGC 1 cut(s) 1542
BmcAI AGTACT 1 cut(s) 974
BmeRI GACNNNNNGTC 1 cut(s) 1189
BmeT110I CYCGRG 7 cut(s) 290, 335, 401, 470, 2342, 2402, 2904
BmgBI CACGTC 1 cut(s) 1234
BmsI GCATC 3 cut(s) 1505, 1996, 2503
BmtI GCTAGC 1 cut(s) 2312
BoxI GACNNNNGTC 1 cut(s) 2781
BpiI GAAGAC 2 cut(s) 478, 1114
BpmI CTGGAG 3 cut(s) 184, 2246, 2989
Bpu1102I GCTNAGC 1 cut(s) 1542
BsaHI GRCGYC 2 cut(s) 1296, 1763
BsaI GGTCTC 1 cut(s) 1239
BsaXI ACNNNNNCTCC 6 cut(s) 642, 672, 1406, 1436, 1832, 1862
Bse1I ACTGG 3 cut(s) 1435, 1613, 2153
Bse3DI GCAATG 2 cut(s) 1491, 2369
BseAI TCCGGA 3 cut(s) 905, 2562, 3132
BseBI CCWGG 6 cut(s) 191, 868, 1118, 1570, 2792, 2954
BseGI GGATG 8 cut(s) 775, 1043, 1867, 2011, 2518, 2617, 2818, 2866
BseMI GCAATG 2 cut(s) 1491, 2369
BseMII CTCAG 6 cut(s) 440, 1164, 1448, 1515, 1556, 1568
BseNI ACTGG 3 cut(s) 1435, 1613, 2153
BsePI GCGCGC 2 cut(s) 1953, 1955
BseRI GAGGAG 4 cut(s) 344, 1691, 1806, 1809
BseSI GKGCMC 3 cut(s) 1806, 2658, 2953
BseX3I CGGCCG 1 cut(s) 1920
BseYI CCCAGC 3 cut(s) 75, 1546, 2412
BsgI GTGCAG 2 cut(s) 1900, 2101
Bsh1285I CGRYCG 5 cut(s) 1098, 1923, 2592, 2706, 2805
BshNI GGYRCC 3 cut(s) 377, 1295, 2682
BshTI ACCGGT 3 cut(s) 2745, 2883, 3156
BsiEI CGRYCG 5 cut(s) 1098, 1923, 2592, 2706, 2805
BsiHKAI GWGCWC 7 cut(s) 336, 957, 1394, 1730, 2127, 2658, 2849
BsiHKCI CYCGRG 7 cut(s) 290, 335, 401, 470, 2342, 2402, 2904
BsmAI GTCTC 6 cut(s) 307, 818, 1239, 1327, 2339, 2789
BsmBI CGTCTC 2 cut(s) 307, 2789
BsmI GAATGC 2 cut(s) 2388, 2898
Bso31I GGTCTC 1 cut(s) 1239
BsoBI CYCGRG 7 cut(s) 290, 335, 401, 470, 2342, 2402, 2904
Bsp120I GGGCCC 2 cut(s) 1802, 2949
Bsp13I TCCGGA 3 cut(s) 905, 2562, 3132
Bsp1407I TGTACA 1 cut(s) 2241
Bsp143I GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
Bsp1720I GCTNAGC 1 cut(s) 1542
BspCNI CTCAG 6 cut(s) 439, 1163, 1449, 1516, 1555, 1567
BspEI TCCGGA 3 cut(s) 905, 2562, 3132
BspMI ACCTGC 1 cut(s) 3087
BspOI GCTAGC 1 cut(s) 2312
BspPI GGATC 6 cut(s) 503, 581, 594, 1685, 1698, 2573
BspQI GCTCTTC 2 cut(s) 473, 2537
BspT107I GGYRCC 3 cut(s) 377, 1295, 2682
BspTNI GGTCTC 1 cut(s) 1239
BsrBI CCGCTC 1 cut(s) 289
BsrDI GCAATG 2 cut(s) 1491, 2369
BsrGI TGTACA 1 cut(s) 2241
BsrI ACTGG 3 cut(s) 1435, 1613, 2153
BssHII GCGCGC 2 cut(s) 1953, 1955
BssMI GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
BssNAI GTATAC 1 cut(s) 2107
BssNI GRCGYC 2 cut(s) 1296, 1763
BssT1I CCWWGG 2 cut(s) 1425, 2938
Bst1107I GTATAC 1 cut(s) 2107
Bst2UI CCWGG 6 cut(s) 191, 868, 1118, 1570, 2792, 2954
Bst6I CTCTTC 2 cut(s) 473, 2537
BstACI GRCGYC 2 cut(s) 1296, 1763
BstAPI GCANNNNNTGC 2 cut(s) 733, 2371
BstAUI TGTACA 1 cut(s) 2241
BstDEI CTNAG 8 cut(s) 426, 515, 1150, 1204, 1457, 1524, 1542, 1554
BstDSI CCRYGG 5 cut(s) 930, 1071, 1896, 1923, 2001
BstENI CCTNNNNNAGG 1 cut(s) 1782
BstF5I GGATG 8 cut(s) 775, 1043, 1867, 2011, 2518, 2617, 2818, 2866
BstH2I RGCGCY 5 cut(s) 207, 364, 1299, 1756, 2426
BstKTI GATC 9 cut(s) 135, 159, 342, 498, 589, 1173, 1306, 1693, 2568
BstMAI GTCTC 6 cut(s) 307, 818, 1239, 1327, 2339, 2789
BstMBI GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
BstMCI CGRYCG 5 cut(s) 1098, 1923, 2592, 2706, 2805
BstNI CCWGG 6 cut(s) 191, 868, 1118, 1570, 2792, 2954
BstNSI RCATGY 3 cut(s) 2158, 2352, 2509
BstPAI GACNNNNGTC 1 cut(s) 2781
BstSFI CTRYAG 1 cut(s) 1807
BstSLI GKGCMC 3 cut(s) 1806, 2658, 2953
BstSNI TACGTA 2 cut(s) 1030, 2213
BstV2I GAAGAC 2 cut(s) 478, 1114
BstX2I RGATCY 3 cut(s) 586, 1170, 1690
BstXI CCANNNNNNTGG 2 cut(s) 2446, 3052
BstYI RGATCY 3 cut(s) 586, 1170, 1690
BstZ17I GTATAC 1 cut(s) 2107
BstZI CGGCCG 1 cut(s) 1920
BsuI GTATCC 1 cut(s) 2791
BtgI CCRYGG 5 cut(s) 930, 1071, 1896, 1923, 2001
BtrI CACGTC 1 cut(s) 1234
BtsCI GGATG 8 cut(s) 775, 1043, 1867, 2011, 2518, 2617, 2818, 2866
BtsI GCAGTG 2 cut(s) 1280, 1591
BtsIMutI CAGTG 6 cut(s) 1158, 1280, 1591, 1606, 1655, 3018
BveI ACCTGC 1 cut(s) 3087
Cfr42I CCGCGG 2 cut(s) 933, 1074
Cfr9I CCCGGG 1 cut(s) 2904
CpoI CGGWCCG 2 cut(s) 2277, 3154
CseI GACGC 6 cut(s) 170, 397, 472, 1379, 1752, 2174
CsiI ACCWGGT 1 cut(s) 1116
CspAI ACCGGT 3 cut(s) 2745, 2883, 3156
CspCI CAANNNNNGTGG 2 cut(s) 982, 1017
CspI CGGWCCG 2 cut(s) 2277, 3154
CviAII CATG 8 cut(s) 319, 1582, 2155, 2349, 2446, 2506, 2536, 2583
DdeI CTNAG 8 cut(s) 426, 515, 1150, 1204, 1457, 1524, 1542, 1554
DinI GGCGCC 1 cut(s) 1297
DpnI GATC 9 cut(s) 134, 158, 341, 497, 588, 1172, 1305, 1692, 2567
DpnII GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
DrdI GACNNNNNNGTC 1 cut(s) 539
DriI GACNNNNNGTC 1 cut(s) 1189
DseDI GACNNNNNNGTC 1 cut(s) 539
EaeI YGGCCR 5 cut(s) 187, 1705, 1920, 2019, 2451
EagI CGGCCG 1 cut(s) 1920
Eam1104I CTCTTC 2 cut(s) 473, 2537
Eam1105I GACNNNNNGTC 1 cut(s) 1189
EarI CTCTTC 2 cut(s) 473, 2537
EciI GGCGGA 7 cut(s) 233, 543, 582, 768, 935, 2384, 2810
Ecl136II GAGCTC 5 cut(s) 334, 955, 1392, 1728, 2847
EclXI CGGCCG 1 cut(s) 1920
Eco105I TACGTA 2 cut(s) 1030, 2213
Eco130I CCWWGG 2 cut(s) 1425, 2938
Eco24I GRGCYC 8 cut(s) 336, 957, 1025, 1394, 1730, 1806, 2849, 2953
Eco31I GGTCTC 1 cut(s) 1239
Eco32I GATATC 1 cut(s) 1333
Eco47III AGCGCT 4 cut(s) 205, 362, 1754, 2424
Eco52I CGGCCG 1 cut(s) 1920
Eco53kI GAGCTC 5 cut(s) 334, 955, 1392, 1728, 2847
Eco57I CTGAAG 3 cut(s) 472, 1401, 2154
Eco72I CACGTG 8 cut(s) 167, 658, 1855, 1876, 2097, 2529, 2659, 2981
Eco88I CYCGRG 7 cut(s) 290, 335, 401, 470, 2342, 2402, 2904
EcoICRI GAGCTC 5 cut(s) 334, 955, 1392, 1728, 2847
EcoNI CCTNNNNNAGG 1 cut(s) 1782
EcoO109I RGGNCCY 9 cut(s) 262, 346, 643, 1399, 1618, 1803, 2046, 2956, 2974
EcoRI GAATTC 3 cut(s) 861, 2248, 2828
EcoRII CCWGG 6 cut(s) 189, 866, 1116, 1568, 2790, 2952
EcoRV GATATC 1 cut(s) 1333
EcoT14I CCWWGG 2 cut(s) 1425, 2938
EcoT38I GRGCYC 8 cut(s) 336, 957, 1025, 1394, 1730, 1806, 2849, 2953
EgeI GGCGCC 1 cut(s) 1297
EheI GGCGCC 1 cut(s) 1297
ErhI CCWWGG 2 cut(s) 1425, 2938
Esp3I CGTCTC 2 cut(s) 307, 2789
FaeI CATG 8 cut(s) 322, 1585, 2158, 2352, 2449, 2509, 2539, 2586
FalI AAGNNNNNCTT 6 cut(s) 380, 412, 470, 502, 2171, 2203
FatI CATG 8 cut(s) 318, 1581, 2154, 2348, 2445, 2505, 2535, 2582
FauI CCCGC 6 cut(s) 582, 1257, 1568, 1627, 1793, 2082
FauNDI CATATG 1 cut(s) 738
FbaI TGATCA 1 cut(s) 1303
FblI GTMKAC 3 cut(s) 543, 2106, 2805
FokI GGATG 8 cut(s) 762, 1030, 1874, 2018, 2525, 2624, 2825, 2873
FriOI GRGCYC 8 cut(s) 336, 957, 1025, 1394, 1730, 1806, 2849, 2953
FspBI CTAG 6 cut(s) 539, 669, 1286, 1646, 2309, 2819
GsaI CCCAGC 3 cut(s) 79, 1550, 2416
GsuI CTGGAG 3 cut(s) 184, 2246, 2989
HaeII RGCGCY 5 cut(s) 207, 364, 1299, 1756, 2426
HgaI GACGC 6 cut(s) 170, 397, 472, 1379, 1752, 2174
Hin1I GRCGYC 2 cut(s) 1296, 1763
Hin1II CATG 8 cut(s) 322, 1585, 2158, 2352, 2449, 2509, 2539, 2586
HincII GTYRAC 2 cut(s) 544, 2806
HindII GTYRAC 2 cut(s) 544, 2806
HpyAV CCTTC 6 cut(s) 182, 620, 1283, 1778, 1969, 1987
HpyF3I CTNAG 8 cut(s) 426, 515, 1150, 1204, 1457, 1524, 1542, 1554
Hsp92I GRCGYC 2 cut(s) 1296, 1763
Hsp92II CATG 8 cut(s) 322, 1585, 2158, 2352, 2449, 2509, 2539, 2586
KasI GGCGCC 1 cut(s) 1295
KflI GGGWCCC 1 cut(s) 2974
Kpn2I TCCGGA 3 cut(s) 905, 2562, 3132
KpnI GGTACC 1 cut(s) 2686
KroI GCCGGC 3 cut(s) 604, 1918, 3112
KroNI GCCGGC 3 cut(s) 606, 1920, 3114
Ksp22I TGATCA 1 cut(s) 1303
KspI CCGCGG 2 cut(s) 933, 1074
Kzo9I GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
LguI GCTCTTC 2 cut(s) 473, 2537
LweI GCATC 3 cut(s) 1505, 1996, 2503
MabI ACCWGGT 1 cut(s) 1116
MaeI CTAG 6 cut(s) 539, 669, 1286, 1646, 2309, 2819
MaeIII GTNAC 3 cut(s) 167, 1181, 2638
MalI GATC 9 cut(s) 134, 158, 341, 497, 588, 1172, 1305, 1692, 2567
MauBI CGCGCGCG 1 cut(s) 1955
MbiI CCGCTC 1 cut(s) 289
MboI GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
MboII GAAGA 9 cut(s) 478, 487, 490, 1114, 1210, 1618, 2044, 2554, 2837
MflI RGATCY 3 cut(s) 586, 1170, 1690
MlsI TGGCCA 2 cut(s) 189, 2021
MluCI AATT 7 cut(s) 519, 861, 1309, 1929, 2248, 2554, 2828
MluNI TGGCCA 2 cut(s) 189, 2021
Mly113I GGCGCC 1 cut(s) 1296
MlyI GAGTC 8 cut(s) 820, 1094, 1142, 1178, 1542, 1546, 1646, 2513
MmeI TCCRAC 6 cut(s) 330, 1173, 1254, 1915, 2589, 3132
Mox20I TGGCCA 2 cut(s) 189, 2021
MreI CGCCGGCG 1 cut(s) 3112
MroI TCCGGA 3 cut(s) 905, 2562, 3132
MroNI GCCGGC 3 cut(s) 604, 1918, 3112
MroXI GAANNNNTTC 2 cut(s) 395, 2558
MscI TGGCCA 2 cut(s) 189, 2021
MseI TTAA 4 cut(s) 1514, 2261, 2285, 3161
MslI CAYNNNNRTG 6 cut(s) 948, 1628, 2135, 2444, 3002, 3023
Msp20I TGGCCA 2 cut(s) 189, 2021
MspA1I CMGCKG 8 cut(s) 235, 375, 492, 932, 1073, 1546, 1812, 1909
Mva1269I GAATGC 2 cut(s) 2388, 2898
MvaI CCWGG 6 cut(s) 191, 868, 1118, 1570, 2792, 2954
NaeI GCCGGC 3 cut(s) 606, 1920, 3114
NarI GGCGCC 1 cut(s) 1296
NdeI CATATG 1 cut(s) 738
NdeII GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
NgoMIV GCCGGC 3 cut(s) 604, 1918, 3112
NheI GCTAGC 1 cut(s) 2308
NlaIII CATG 8 cut(s) 322, 1585, 2158, 2352, 2449, 2509, 2539, 2586
NmeAIII GCCGAG 2 cut(s) 1683, 1929
NmuCI GTSAC 3 cut(s) 167, 1181, 2638
NspI RCATGY 3 cut(s) 2158, 2352, 2509
OliI CACNNNNGTG 2 cut(s) 948, 3023
PaeR7I CTCGAG 3 cut(s) 290, 335, 470
PauI GCGCGC 2 cut(s) 1953, 1955
PciSI GCTCTTC 2 cut(s) 473, 2537
PctI GAATGC 2 cut(s) 2388, 2898
PdiI GCCGGC 3 cut(s) 606, 1920, 3114
PdmI GAANNNNTTC 2 cut(s) 395, 2558
PflFI GACNNNGTC 2 cut(s) 7, 1555
PfoI TCCNGGA 1 cut(s) 2273
PinAI ACCGGT 3 cut(s) 2745, 2883, 3156
PleI GAGTC 8 cut(s) 820, 1094, 1142, 1178, 1541, 1546, 1646, 2513
PluTI GGCGCC 1 cut(s) 1299
PmaCI CACGTG 8 cut(s) 167, 658, 1855, 1876, 2097, 2529, 2659, 2981
PmlI CACGTG 8 cut(s) 167, 658, 1855, 1876, 2097, 2529, 2659, 2981
PpsI GAGTC 8 cut(s) 820, 1094, 1142, 1178, 1541, 1546, 1646, 2513
PpuMI RGGWCCY 6 cut(s) 262, 346, 643, 1618, 2046, 2974
PshAI GACNNNNGTC 1 cut(s) 2781
Psp124BI GAGCTC 5 cut(s) 336, 957, 1394, 1730, 2849
Psp5II RGGWCCY 6 cut(s) 262, 346, 643, 1618, 2046, 2974
Psp6I CCWGG 6 cut(s) 189, 866, 1116, 1568, 2790, 2952
PspCI CACGTG 8 cut(s) 167, 658, 1855, 1876, 2097, 2529, 2659, 2981
PspFI CCCAGC 3 cut(s) 75, 1546, 2412
PspGI CCWGG 6 cut(s) 189, 866, 1116, 1568, 2790, 2952
PspOMI GGGCCC 2 cut(s) 1802, 2949
PspPPI RGGWCCY 6 cut(s) 262, 346, 643, 1618, 2046, 2974
PspXI VCTCGAGB 1 cut(s) 290
PsrI GAACNNNNNNTAC 6 cut(s) 869, 901, 2075, 2107, 2732, 2764
PsuI RGATCY 3 cut(s) 586, 1170, 1690
PsyI GACNNNGTC 2 cut(s) 7, 1555
PteI GCGCGC 2 cut(s) 1953, 1955
PvuII CAGCTG 3 cut(s) 492, 1546, 1909
RseI CAYNNNNRTG 6 cut(s) 948, 1628, 2135, 2444, 3002, 3023
Rsr2I CGGWCCG 2 cut(s) 2277, 3154
RsrII CGGWCCG 2 cut(s) 2277, 3154
SacI GAGCTC 5 cut(s) 336, 957, 1394, 1730, 2849
SacII CCGCGG 2 cut(s) 933, 1074
SalI GTCGAC 2 cut(s) 542, 2804
SapI GCTCTTC 2 cut(s) 473, 2537
SaqAI TTAA 4 cut(s) 1514, 2261, 2285, 3161
Sau3AI GATC 9 cut(s) 132, 156, 339, 495, 586, 1170, 1303, 1690, 2565
ScaI AGTACT 1 cut(s) 974
SchI GAGTC 8 cut(s) 820, 1094, 1142, 1178, 1542, 1546, 1646, 2513
SexAI ACCWGGT 1 cut(s) 1116
SfaNI GCATC 3 cut(s) 1505, 1996, 2503
SfcI CTRYAG 1 cut(s) 1807
SfoI GGCGCC 1 cut(s) 1297
Sfr274I CTCGAG 3 cut(s) 290, 335, 470
Sfr303I CCGCGG 2 cut(s) 933, 1074
SgrAI CRCCGGYG 2 cut(s) 1298, 3112
SgrBI CCGCGG 2 cut(s) 933, 1074
SlaI CTCGAG 3 cut(s) 290, 335, 470
SmaI CCCGGG 1 cut(s) 2906
SmiMI CAYNNNNRTG 6 cut(s) 948, 1628, 2135, 2444, 3002, 3023
SmlI CTYRAG 3 cut(s) 290, 335, 470
SmoI CTYRAG 3 cut(s) 290, 335, 470
SnaBI TACGTA 2 cut(s) 1030, 2213
Sse9I AATT 7 cut(s) 519, 861, 1309, 1929, 2248, 2554, 2828
SspDI GGCGCC 1 cut(s) 1295
SspMI CTAG 6 cut(s) 539, 669, 1286, 1646, 2309, 2819
SstI GAGCTC 5 cut(s) 336, 957, 1394, 1730, 2849
StyI CCWWGG 2 cut(s) 1425, 2938
TaqII GACCGA 1 cut(s) 1112
TasI AATT 7 cut(s) 519, 861, 1309, 1929, 2248, 2554, 2828
TatI WGTACW 4 cut(s) 665, 972, 2091, 2241
Tru1I TTAA 4 cut(s) 1514, 2261, 2285, 3161
Tru9I TTAA 4 cut(s) 1514, 2261, 2285, 3161
TscAI CASTG 6 cut(s) 1158, 1280, 1598, 1613, 1662, 3025
TseFI GTSAC 3 cut(s) 167, 1181, 2638
Tsp45I GTSAC 3 cut(s) 167, 1181, 2638
TspDTI ATGAA 6 cut(s) 1598, 1878, 1988, 2241, 2838, 2986
TspGWI ACGGA 7 cut(s) 1028, 1165, 2018, 2075, 2180, 2504, 2771
TspMI CCCGGG 1 cut(s) 2904
TspRI CASTG 6 cut(s) 1158, 1280, 1598, 1613, 1662, 3025
Tth111I GACNNNGTC 2 cut(s) 7, 1555
VneI GTGCAC 1 cut(s) 2654
XagI CCTNNNNNAGG 1 cut(s) 1782
XapI RAATTY 6 cut(s) 519, 861, 1309, 1929, 2248, 2828
XceI RCATGY 3 cut(s) 2158, 2352, 2509
XcmI CCANNNNNNNNNTGG 2 cut(s) 208, 2446
XhoI CTCGAG 3 cut(s) 290, 335, 470
XmaI CCCGGG 1 cut(s) 2904
XmiI GTMKAC 3 cut(s) 543, 2106, 2805
XmnI GAANNNNTTC 2 cut(s) 395, 2558
XspI CTAG 6 cut(s) 539, 669, 1286, 1646, 2309, 2819
ZrmI AGTACT 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.