Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0015951

Physical Location & Seq

Genomic Coordinates Reverse (-)

32545972 .. 32549208

Gene Structure 3237 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1188400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3237 bp

ATGACGGTGTCGTTTCAAGTCGTCCAAAACCATCCACCGCCGCAACCATCCCAACAACCCCCACACCAAACCCAACAACCACCGCCACAACAGCAGCAGCAGCAACAACCACCGCCACAACAGCAACCACCATCGGAACCGCCGCAGCCGCCGAGTGTCGTCAGGAAGCTAATCGTCGAAGTCGTCGACGCACGTGACCTGCTCCCCAAGGATGGCCAGGGCAGCTCCAGCCCCTACGTCGTCGCCGACTTCGACGGCCAGCGGAAGCGGACCTCCACCAAGTTCAAGTCCCTCAACCCTGTCTGGAACGAGCCTCTCGAGTTCATCGTCTCCGACCCTGACCACATGGAATACGAAGAGCTCGAGATCGAGGTGCTCAACGACAAGCGTTTTGGGACTTCCAGTGGCAGCGCCCGTAAAAACCACTTCCTCGGGAGGGTAAAGCTGTACGGCACCCAGTTTTCGAAGCGTGGAGATGAGGGACTGGTGTATTTCCAGCTGGAGAAGAAGAGCGTGTTCAGCTGGATTAGAGGCGAGATTGGGCTGAGGATTTATTACTACGACGAGATGGTTGAGGAATCGCCTCCGCCGCCGCCTCCAGATGACCCTCCGCAGGAGAAGCCTAGATCTCAGCCTCCGGGGGTTGTGGTGGTCGAGGAGGGAAGGGTGTCTGGAGCCCATGGAATGCCGGTTGAGAGCACAATCCACCACGAAGGCTCGTACTCGCCGCCGGTTGTGGTGATCGAGGAGTCGCCGCCGCCGATGGTTTATGTGCATTCTGAACCGCTGGTTCAGGAGATGTCGAATCACCAGCATCATCAGCATGAGGAGGTTCAATTTCAACCAGAGGTGAGGAAAATGGAGATGAACAGAGTCTGTTTGACAGGTGAAAGAGTGAGAATCCAACGAAGGCCAAATGGAGACTACGCTCCGAAAGTGATTTCTGGAAAGTTCGGGGCGAAGGGTGCGGCGGAGAGGATTCACCCCTGCGGTCTCGTGGAGCCGATGCAGTACTTGTTCATCAGAATCGTCAAGGCTCGAGGACTCGCTCCCAACGAGAATCCATACGTCAAGGTCCGTACGTCGGCCCACGTCGTGAGGTCGAAGGTGGCGGTTCACAGGCCGTGTGAGCCGACCGACTCGCCCGAGTGGAACCAGGTGTTCGCGCTCGCACACAACCGGCCTGAATCAGCGGGTTCCGAGTTGCAGATCTCCGTTCACGACTCGCCGTCCGAGCAGTTCTTAGGCGGCATTTGCTTTGACATGAGTGAGGTGCCGGTTCGTGACCCGCCCGATAGTCCTCTGGCTCCGCAGTGGTGGCGTCTAGACAGTAGCGCCGGAGATCAGCACCCCGGTCGAGTCTCCGGCGATATCCAGCTATCGGTTTGGTTCGGGACCCAAGCAGATGACGCGTTCCAGGATGCGTGGAGCTCCGACGCTCCATTCGTGGCTCACACGCGCTCCAAAGTTTACCAATCGCCGAAGCTCTGGTATCTGAGGACGACGGTTATGGAAGTTCAGGATCTTCACATACCGTCAAATTTGCCTCCATTGACGACTCCAGAGATTCGCGTCAAAGCTCAGCTCGGATCCCAATCGGCGCGAACCCGGCGCGGCTCCATGAACAACCACTGCGCGTCGTTTCACTGGAACGAGGACCTCATCTTCGTCGCCGGCGAGCCGCTTGAGGACTCGCTGATTCTACTCGTGGAGGACCGCACAAACAAGGACGCCGCGCTCCTCGGCCACGTCCAAATTCCGGTGAGCTCGATCGAACAACGAATCGACGATCGCTACGTGGCGTCCAAGTGGCTCCCACTGGAATGCGGGGGCGGCGGAGCTGCGCCCCACTGTGTGAGCGGCGGAGATGGGTCCTACTGCGGGAGAATCCATCTGCGCCTTTGCCTGGAGGGTGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTCAGGCCGACGGCTAAGCAGCTTTGGAAGCCGGCTGTCGGCATTTTGGAGCTGGGGATTCTCGGCGCGCGCGGCTTGCTTCCGATGAAGGCGAAATCCTTCGGGAAAGGCTCCACGGATGCTTACTGTGTGGCCAAGTACGGGAAAAAGTGGGTCCGGACCCGAACCGTCATGGACAGCTTTGACCCGAGGTGGAACGAGCAGTACACGTGGCAGGTTTATGACCCTTGCACTGTCCTCACCATCGGAGTGTTCGACAACTGGCGTATGTTTGCTGCCGCGGGGGAGGACCGGCCAGACTACAGTATAGGAAAAGTACGAATACGTATATCTACGATGGAGAGCAACAAGGTGTATACGAATTCGTACCCGTTGCTGGTGCTGCTGAGAACCGGGTTGAAGAAAATGGGCGAGATTGAGCTGGCCGTCCGGTTCGCCTGCCCGTCGTTGCTGCCCGAGACGTGCGCGGTGTACGGCCAGCCGTTGCTTCCCAGAATGCACTACCTCCGCCCGCTCGGGGTCACCCAACAAGAGGCGCTACGTGGCGCCGCAACTCGCATGGTGGCTGCGTGGCTGGCGAGGTCCGAGCCGCCGTTGGGGCAGGAGGTGGTTCGGTACATGTTGGATGCGGATTCGCATGCGTGGAGCATGAGGAAGAGCAAGGCCAATTGGTTTCGGATCGTGGCGGTTCTTGCGTGGGTGGTCGGGTTAGCGAAATGGTTGGATAATATCCGGAGATGGAGAAACCCGGTTACGACGGTTTTGGTCCACGTGTTGTATTTGGTTCTTGTTTGGTACCCGGATCTGATTGTCCCAACCGGGTTTTTATACGTTTTCTTGATCGGAGTTTGGTATTACCGATTCAGGCCCAAGTCACCAGCTGGTATGGATATCCGGCTTTCGCAAGCGGATTCGGTCGACCCAGATGAGCTCGATGAGGAATTTGACACCATCCCAAGCTCAAGACCGCCCGATATCATCCGGGTCAGGTACGACCGGTTGCGAATGCTGGCGGCCCGGGTCCAAACCGTTTTGGGCGATTTTGCAACCCAAGGAGAGAGGGCCCAAGCATTGGTGAGTTGGAGGGACCCTAGAGCCACAAAATTGTTCATCGGTGTGTGCCTAGCAATCACTGTGGTTTTGTACGCGGTGCCACCAAAAATGGTTGCTGTGGCCTTGGGATTTTACTACCTGCGCCACCCCATGTTCCGCGAGCCGATGCCTCCGGCGAGCCTGAACTTCTTCCGACGGCTTCCGAGCTTGTCGGACCGGCTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009506 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0030054 GO:0031224 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1079

Amino Acids

121.61

Weight (kDa)

7.39

Isoelectric Point (pI)

54.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	56 - 149	9.9e-19	C2 domain
C2	PF00168	338 - 426	3.2e-08	C2 domain
C2	PF00168	497 - 607	2.8e-07	C2 domain
C2	PF00168	666 - 777	1.3e-18	C2 domain
PRT_C	PF08372	923 - 1078	4.6e-72	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74720
fragaria_vesca	FvH4_5g15460
malus_domestica	MD06G1188400.v1.1
prunus_persica	Prupe.5G186600_v2.0.a1
pyrus_communis	pycom06g16700
rosa_chinensis	RchiOBHm_Chr7g0180621
rosa_laevigata	RLG00000005249
rosa_multiflora	Rmu_co8415707.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272730
rosa_rugosa	Rorug06G0434600
rosa_samantha	Rh7AG035700 Rh7BG035600 Rh7CG037300 Rh7DG035900
rosa_wichuraiana	Rw7G002940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	207, 2161, 3156
Acc65I	GGTACC	1 cut(s)	2751
AccB1I	GGYRCC	5 cut(s)	452, 1273, 2501, 2751, 3106
AccB7I	CCANNNNNTGG	1 cut(s)	3028
AccBSI	CCGCTC	2 cut(s)	1860, 2470
AccI	GTMKAC	3 cut(s)	186, 2312, 2874
AccIII	TCCGGA	2 cut(s)	2112, 2688
AclWI	GGATC	5 cut(s)	1530, 1584, 1597, 2642, 2766
AcoI	YGGCCR	7 cut(s)	214, 256, 1744, 2088, 2249, 2379, 2431
AcsI	RAATTY	4 cut(s)	1540, 1755, 2317, 2897
AcuI	CTGAAG	1 cut(s)	1942
AcvI	CACGTG	5 cut(s)	194, 1924, 1945, 2166, 2728
AcyI	GRCGYC	4 cut(s)	1321, 1731, 1802, 2502
AdeI	CACNNNGTG	2 cut(s)	1096, 1855
AflIII	ACRYGT	5 cut(s)	1410, 1944, 2163, 2574, 2727
AgeI	ACCGGT	1 cut(s)	2952
AgsI	TTSAA	5 cut(s)	17, 286, 836, 842, 2356
AhdI	GACNNNNNGTC	1 cut(s)	1228
AjiI	CACGTC	3 cut(s)	1093, 1750, 2418
AjnI	CCWGG	4 cut(s)	216, 1155, 1416, 1905
Alw21I	GWGCWC	6 cut(s)	363, 378, 701, 1433, 1769, 2889
Alw26I	GTCTC	5 cut(s)	334, 915, 998, 1366, 2408
AlwI	GGATC	5 cut(s)	1530, 1584, 1597, 2642, 2766
AlwNI	CAGNNNCTG	1 cut(s)	876
Ama87I	CYCGRG	9 cut(s)	317, 362, 431, 1038, 1145, 2143, 2411, 2471, 2973
Aor13HI	TCCGGA	2 cut(s)	2112, 2688
ApaI	GGGCCC	1 cut(s)	3022
ApoI	RAATTY	4 cut(s)	1540, 1755, 2317, 2897
ArsI	GACNNNNNNTTYG	6 cut(s)	374, 406, 1427, 1459, 1649, 1681
AsiGI	ACCGGT	1 cut(s)	2952
Asp700I	GAANNNNTTC	2 cut(s)	2054, 3197
Asp718I	GGTACC	1 cut(s)	2751
AsuII	TTCGAA	1 cut(s)	464
AvaI	CYCGRG	9 cut(s)	317, 362, 431, 1038, 1145, 2143, 2411, 2471, 2973
BaeGI	GKGCMC	1 cut(s)	3022
BalI	TGGCCA	2 cut(s)	216, 2090
BamHI	GGATCC	1 cut(s)	1589
BanI	GGYRCC	5 cut(s)	452, 1273, 2501, 2751, 3106
BanII	GRGCYC	6 cut(s)	363, 679, 1433, 1769, 2889, 3022
BauI	CACGAG	2 cut(s)	995, 1706
BbrPI	CACGTG	5 cut(s)	194, 1924, 1945, 2166, 2728
Bbv12I	GWGCWC	6 cut(s)	363, 378, 701, 1433, 1769, 2889
BbvCI	CCTCAGC	1 cut(s)	545
BcgI	CGANNNNNNTGC	2 cut(s)	1337, 1371
BciT130I	CCWGG	4 cut(s)	218, 1157, 1418, 1907
BcoDI	GTCTC	5 cut(s)	334, 915, 998, 1366, 2408
BfaI	CTAG	4 cut(s)	624, 1325, 3048, 3080
BfmI	CTRYAG	1 cut(s)	2257
BfoI	RGCGCY	4 cut(s)	414, 1338, 2495, 2505
BfuAI	ACCTGC	3 cut(s)	207, 2161, 3156
BglI	GCCNNNNNGGC	1 cut(s)	2554
BglII	AGATCT	2 cut(s)	626, 1209
BlpI	GCTNAGC	2 cut(s)	1581, 1971
BmcAI	AGTACT	1 cut(s)	1013
BmeRI	GACNNNNNGTC	1 cut(s)	1228
BmeT110I	CYCGRG	9 cut(s)	317, 362, 431, 1038, 1145, 2143, 2411, 2471, 2973
BmgBI	CACGTC	3 cut(s)	1093, 1750, 2418
BmrI	ACTGGG	1 cut(s)	451
BmsI	GCATC	6 cut(s)	823, 996, 1411, 2065, 2572, 3165
BmuI	ACTGGG	1 cut(s)	451
BpmI	CTGGAG	6 cut(s)	211, 521, 582, 693, 1545, 1928
Bpu10I	CCTNAGC	1 cut(s)	545
Bpu1102I	GCTNAGC	2 cut(s)	1581, 1971
Bpu14I	TTCGAA	1 cut(s)	464
BpuEI	CTTGAG	2 cut(s)	1706, 2902
BsaAI	YACGTR	8 cut(s)	194, 1798, 1924, 1945, 2166, 2282, 2498, 2728
BsaBI	GATNNNNATC	1 cut(s)	1594
BsaHI	GRCGYC	4 cut(s)	1321, 1731, 1802, 2502
BsaI	GGTCTC	1 cut(s)	998
BsaWI	WCCGGW	5 cut(s)	1759, 2112, 2385, 2688, 2952
BsaXI	ACNNNNNCTCC	4 cut(s)	1445, 1475, 1901, 1931
Bse118I	RCCGGY	9 cut(s)	688, 730, 1179, 1276, 1673, 1987, 2247, 2952, 3225
Bse1I	ACTGG	6 cut(s)	402, 457, 489, 1652, 1824, 2222
Bse8I	GATNNNNATC	1 cut(s)	1594
BseAI	TCCGGA	2 cut(s)	2112, 2688
BseBI	CCWGG	4 cut(s)	218, 1157, 1418, 1907
BseGI	GGATG	8 cut(s)	31, 47, 217, 1426, 2080, 2587, 2907, 2934
BseJI	GATNNNNATC	1 cut(s)	1594
BseMII	CTCAG	5 cut(s)	536, 644, 1487, 1595, 2333
BseNI	ACTGG	6 cut(s)	402, 457, 489, 1652, 1824, 2222
BsePI	GCGCGC	2 cut(s)	2022, 2024
BseRI	GAGGAG	4 cut(s)	671, 761, 842, 1730
BseSI	GKGCMC	1 cut(s)	3022
BseYI	CCCAGC	1 cut(s)	2008
BsgI	GTGCAG	1 cut(s)	1969
Bsh1285I	CGRYCG	6 cut(s)	1137, 1357, 1773, 1792, 2874, 2953
BshNI	GGYRCC	5 cut(s)	452, 1273, 2501, 2751, 3106
BshTI	ACCGGT	1 cut(s)	2952
BsiEI	CGRYCG	6 cut(s)	1137, 1357, 1773, 1792, 2874, 2953
BsiHKAI	GWGCWC	6 cut(s)	363, 378, 701, 1433, 1769, 2889
BsiHKCI	CYCGRG	9 cut(s)	317, 362, 431, 1038, 1145, 2143, 2411, 2471, 2973
BsiWI	CGTACG	1 cut(s)	1079
BslFI	GGGAC	6 cut(s)	274, 409, 495, 1408, 2753, 3056
BsmAI	GTCTC	5 cut(s)	334, 915, 998, 1366, 2408
BsmBI	CGTCTC	2 cut(s)	334, 2408
BsmFI	GGGAC	6 cut(s)	274, 409, 495, 1408, 2753, 3056
BsmI	GAATGC	5 cut(s)	690, 775, 1829, 2457, 2967
Bso31I	GGTCTC	1 cut(s)	998
BsoBI	CYCGRG	9 cut(s)	317, 362, 431, 1038, 1145, 2143, 2411, 2471, 2973
Bsp119I	TTCGAA	1 cut(s)	464
Bsp120I	GGGCCC	1 cut(s)	3018
Bsp1286I	GDGCHC	8 cut(s)	363, 378, 679, 701, 1433, 1769, 2889, 3022
Bsp13I	TCCGGA	2 cut(s)	2112, 2688
Bsp1720I	GCTNAGC	2 cut(s)	1581, 1971
Bsp19I	CCATGG	1 cut(s)	679
BspCNI	CTCAG	5 cut(s)	537, 643, 1488, 1594, 2334
BspEI	TCCGGA	2 cut(s)	2112, 2688
BspMI	ACCTGC	3 cut(s)	207, 2161, 3156
BspPI	GGATC	5 cut(s)	1530, 1584, 1597, 2642, 2766
BspQI	GCTCTTC	3 cut(s)	351, 503, 2606
BspT104I	TTCGAA	1 cut(s)	464
BspT107I	GGYRCC	5 cut(s)	452, 1273, 2501, 2751, 3106
BspTNI	GGTCTC	1 cut(s)	998
BsrBI	CCGCTC	2 cut(s)	1860, 2470
BsrFI	RCCGGY	9 cut(s)	688, 730, 1179, 1276, 1673, 1987, 2247, 2952, 3225
BsrI	ACTGG	6 cut(s)	402, 457, 489, 1652, 1824, 2222
BssAI	RCCGGY	9 cut(s)	688, 730, 1179, 1276, 1673, 1987, 2247, 2952, 3225
BssHII	GCGCGC	2 cut(s)	2022, 2024
BssNAI	GTATAC	1 cut(s)	2313
BssNI	GRCGYC	4 cut(s)	1321, 1731, 1802, 2502
BssSI	CACGAG	2 cut(s)	995, 1706
BssT1I	CCWWGG	4 cut(s)	207, 679, 3007, 3132
Bst1107I	GTATAC	1 cut(s)	2313
Bst2BI	CACGAG	2 cut(s)	995, 1706
Bst2UI	CCWGG	4 cut(s)	218, 1157, 1418, 1907
Bst6I	CTCTTC	3 cut(s)	351, 503, 2606
BstACI	GRCGYC	4 cut(s)	1321, 1731, 1802, 2502
BstBAI	YACGTR	8 cut(s)	194, 1798, 1924, 1945, 2166, 2282, 2498, 2728
BstBI	TTCGAA	1 cut(s)	464
BstDEI	CTNAG	7 cut(s)	545, 630, 1243, 1496, 1581, 1971, 2342
BstDSI	CCRYGG	3 cut(s)	679, 2070, 2235
BstEII	GGTNACC	1 cut(s)	2476
BstF5I	GGATG	8 cut(s)	31, 47, 217, 1426, 2080, 2587, 2907, 2934
BstH2I	RGCGCY	4 cut(s)	414, 1338, 2495, 2505
BstMAI	GTCTC	5 cut(s)	334, 915, 998, 1366, 2408
BstMCI	CGRYCG	6 cut(s)	1137, 1357, 1773, 1792, 2874, 2953
BstNI	CCWGG	4 cut(s)	218, 1157, 1418, 1907
BstNSI	RCATGY	2 cut(s)	2578, 2597
BstPI	GGTNACC	1 cut(s)	2476
BstSFI	CTRYAG	1 cut(s)	2257
BstSLI	GKGCMC	1 cut(s)	3022
BstSNI	TACGTA	1 cut(s)	2282
BstX2I	RGATCY	5 cut(s)	626, 1209, 1522, 1589, 2758
BstYI	RGATCY	5 cut(s)	626, 1209, 1522, 1589, 2758
BstZ17I	GTATAC	1 cut(s)	2313
BtgI	CCRYGG	3 cut(s)	679, 2070, 2235
BtrI	CACGTC	3 cut(s)	1093, 1750, 2418
BtsCI	GGATG	8 cut(s)	31, 47, 217, 1426, 2080, 2587, 2907, 2934
BtsI	GCAGTG	2 cut(s)	1319, 1630
BtsIMutI	CAGTG	8 cut(s)	409, 1319, 1630, 1645, 1817, 1849, 2187, 3087
BveI	ACCTGC	3 cut(s)	207, 2161, 3156
CaiI	CAGNNNCTG	1 cut(s)	876
Cfr10I	RCCGGY	9 cut(s)	688, 730, 1179, 1276, 1673, 1987, 2247, 2952, 3225
Cfr42I	CCGCGG	1 cut(s)	2238
Cfr9I	CCCGGG	1 cut(s)	2973
CpoI	CGGWCCG	1 cut(s)	3223
CseI	GACGC	8 cut(s)	197, 1310, 1418, 1445, 1561, 1626, 1739, 1791
CsiI	ACCWGGT	1 cut(s)	1155
CspAI	ACCGGT	1 cut(s)	2952
CspCI	CAANNNNNGTGG	2 cut(s)	3072, 3107
CspI	CGGWCCG	1 cut(s)	3223
DdeI	CTNAG	7 cut(s)	545, 630, 1243, 1496, 1581, 1971, 2342
DinI	GGCGCC	1 cut(s)	2503
DraIII	CACNNNGTG	2 cut(s)	1096, 1855
DriI	GACNNNNNGTC	1 cut(s)	1228
EaeI	YGGCCR	7 cut(s)	214, 256, 1744, 2088, 2249, 2379, 2431
Eam1104I	CTCTTC	3 cut(s)	351, 503, 2606
Eam1105I	GACNNNNNGTC	1 cut(s)	1228
EarI	CTCTTC	3 cut(s)	351, 503, 2606
EciI	GGCGGA	5 cut(s)	576, 986, 1851, 1878, 2453
Ecl136II	GAGCTC	4 cut(s)	361, 1431, 1767, 2887
Eco105I	TACGTA	1 cut(s)	2282
Eco130I	CCWWGG	4 cut(s)	207, 679, 3007, 3132
Eco24I	GRGCYC	6 cut(s)	363, 679, 1433, 1769, 2889, 3022
Eco31I	GGTCTC	1 cut(s)	998
Eco32I	GATATC	3 cut(s)	1372, 2848, 2932
Eco53kI	GAGCTC	4 cut(s)	361, 1431, 1767, 2887
Eco57I	CTGAAG	1 cut(s)	1942
Eco72I	CACGTG	5 cut(s)	194, 1924, 1945, 2166, 2728
Eco88I	CYCGRG	9 cut(s)	317, 362, 431, 1038, 1145, 2143, 2411, 2471, 2973
Eco91I	GGTNACC	1 cut(s)	2476
EcoICRI	GAGCTC	4 cut(s)	361, 1431, 1767, 2887
EcoO109I	RGGNCCY	5 cut(s)	1395, 1657, 1872, 3018, 3043
EcoO65I	GGTNACC	1 cut(s)	2476
EcoRI	GAATTC	1 cut(s)	2317
EcoRII	CCWGG	4 cut(s)	216, 1155, 1416, 1905
EcoRV	GATATC	3 cut(s)	1372, 2848, 2932
EcoT14I	CCWWGG	4 cut(s)	207, 679, 3007, 3132
EcoT38I	GRGCYC	6 cut(s)	363, 679, 1433, 1769, 2889, 3022
EgeI	GGCGCC	1 cut(s)	2503
EheI	GGCGCC	1 cut(s)	2503
ErhI	CCWWGG	4 cut(s)	207, 679, 3007, 3132
Esp3I	CGTCTC	2 cut(s)	334, 2408
FaqI	GGGAC	6 cut(s)	274, 409, 495, 1408, 2753, 3056
FauI	CCCGC	6 cut(s)	1186, 1296, 1820, 1874, 2230, 2475
FblI	GTMKAC	3 cut(s)	186, 2312, 2874
FokI	GGATG	8 cut(s)	18, 34, 224, 1433, 2087, 2594, 2894, 2921
FriOI	GRGCYC	6 cut(s)	363, 679, 1433, 1769, 2889, 3022
FspBI	CTAG	4 cut(s)	624, 1325, 3048, 3080
GsaI	CCCAGC	1 cut(s)	2012
GsuI	CTGGAG	6 cut(s)	211, 521, 582, 693, 1545, 1928
HaeII	RGCGCY	4 cut(s)	414, 1338, 2495, 2505
HgaI	GACGC	8 cut(s)	197, 1310, 1418, 1445, 1561, 1626, 1739, 1791
Hin1I	GRCGYC	4 cut(s)	1321, 1731, 1802, 2502
HincII	GTYRAC	2 cut(s)	187, 2875
HindII	GTYRAC	2 cut(s)	187, 2875
Hpy166II	GTNNAC	9 cut(s)	187, 1117, 1219, 1471, 2163, 2313, 2428, 2725, 2875
Hpy8I	GTNNAC	9 cut(s)	187, 1117, 1219, 1471, 2163, 2313, 2428, 2725, 2875
HpyAV	CCTTC	7 cut(s)	657, 707, 903, 955, 1099, 2038, 2065
HpyCH4V	TGCA	7 cut(s)	775, 1009, 1207, 1950, 2187, 2455, 3002
HpyF3I	CTNAG	7 cut(s)	545, 630, 1243, 1496, 1581, 1971, 2342
Hsp92I	GRCGYC	4 cut(s)	1321, 1731, 1802, 2502
KasI	GGCGCC	1 cut(s)	2501
KflI	GGGWCCC	2 cut(s)	1395, 3043
Kpn2I	TCCGGA	2 cut(s)	2112, 2688
KpnI	GGTACC	1 cut(s)	2755
KroI	GCCGGC	2 cut(s)	1673, 1987
KroNI	GCCGGC	2 cut(s)	1675, 1989
KspI	CCGCGG	1 cut(s)	2238
LguI	GCTCTTC	3 cut(s)	351, 503, 2606
LweI	GCATC	6 cut(s)	823, 996, 1411, 2065, 2572, 3165
MabI	ACCWGGT	1 cut(s)	1155
MaeI	CTAG	4 cut(s)	624, 1325, 3048, 3080
MaeIII	GTNAC	5 cut(s)	194, 1283, 2476, 2707, 2829
MauBI	CGCGCGCG	1 cut(s)	2024
MbiI	CCGCTC	2 cut(s)	1860, 2470
MboII	GAAGA	8 cut(s)	368, 517, 520, 1517, 1657, 2368, 2623, 3190
MfeI	CAATTG	1 cut(s)	2623
MflI	RGATCY	5 cut(s)	626, 1209, 1522, 1589, 2758
MhlI	GDGCHC	8 cut(s)	363, 378, 679, 701, 1433, 1769, 2889, 3022
MlsI	TGGCCA	2 cut(s)	216, 2090
MluCI	AATT	7 cut(s)	836, 1540, 1755, 2317, 2623, 2897, 3059
MluI	ACGCGT	1 cut(s)	1410
MluNI	TGGCCA	2 cut(s)	216, 2090
Mly113I	GGCGCC	1 cut(s)	2502
MlyI	GAGTC	8 cut(s)	758, 882, 1038, 1133, 1217, 1368, 1552, 1685
MmeI	TCCRAC	8 cut(s)	357, 928, 1458, 2559, 2658, 3017, 3201, 3226
Mox20I	TGGCCA	2 cut(s)	216, 2090
MreI	CGCCGGCG	1 cut(s)	1673
MroI	TCCGGA	2 cut(s)	2112, 2688
MroNI	GCCGGC	2 cut(s)	1673, 1987
MroXI	GAANNNNTTC	2 cut(s)	2054, 3197
MscI	TGGCCA	2 cut(s)	216, 2090
MslI	CAYNNNNRTG	4 cut(s)	822, 1822, 2204, 3071
Msp20I	TGGCCA	2 cut(s)	216, 2090
MspA1I	CMGCKG	7 cut(s)	262, 499, 522, 787, 1193, 2237, 2837
MunI	CAATTG	1 cut(s)	2623
Mva1269I	GAATGC	5 cut(s)	690, 775, 1829, 2457, 2967
MvaI	CCWGG	4 cut(s)	218, 1157, 1418, 1907
NaeI	GCCGGC	2 cut(s)	1675, 1989
NarI	GGCGCC	1 cut(s)	2502
NcoI	CCATGG	1 cut(s)	679
NgoMIV	GCCGGC	2 cut(s)	1673, 1987
NmeAIII	GCCGAG	3 cut(s)	177, 1722, 1998
NmuCI	GTSAC	4 cut(s)	194, 1283, 2476, 2829
NspI	RCATGY	2 cut(s)	2578, 2597
NspV	TTCGAA	1 cut(s)	464
PaeI	GCATGC	1 cut(s)	2597
PaeR7I	CTCGAG	3 cut(s)	317, 362, 1038
PauI	GCGCGC	2 cut(s)	2022, 2024
PciI	ACATGT	1 cut(s)	2574
PciSI	GCTCTTC	3 cut(s)	351, 503, 2606
PctI	GAATGC	5 cut(s)	690, 775, 1829, 2457, 2967
PdiI	GCCGGC	2 cut(s)	1675, 1989
PdmI	GAANNNNTTC	2 cut(s)	2054, 3197
Pfl23II	CGTACG	1 cut(s)	1079
PflFI	GACNNNGTC	1 cut(s)	7
PflMI	CCANNNNNTGG	1 cut(s)	3028
PfoI	TCCNGGA	1 cut(s)	1416
PinAI	ACCGGT	1 cut(s)	2952
Ple19I	CGATCG	2 cut(s)	1773, 1792
PleI	GAGTC	8 cut(s)	757, 881, 1038, 1133, 1217, 1367, 1552, 1685
PluTI	GGCGCC	1 cut(s)	2505
PmaCI	CACGTG	5 cut(s)	194, 1924, 1945, 2166, 2728
PmlI	CACGTG	5 cut(s)	194, 1924, 1945, 2166, 2728
PpsI	GAGTC	8 cut(s)	757, 881, 1038, 1133, 1217, 1367, 1552, 1685
Ppu21I	YACGTR	8 cut(s)	194, 1798, 1924, 1945, 2166, 2282, 2498, 2728
PpuMI	RGGWCCY	4 cut(s)	1395, 1657, 1872, 3043
PscI	ACATGT	1 cut(s)	2574
Psp124BI	GAGCTC	4 cut(s)	363, 1433, 1769, 2889
Psp5II	RGGWCCY	4 cut(s)	1395, 1657, 1872, 3043
Psp6I	CCWGG	4 cut(s)	216, 1155, 1416, 1905
PspCI	CACGTG	5 cut(s)	194, 1924, 1945, 2166, 2728
PspEI	GGTNACC	1 cut(s)	2476
PspFI	CCCAGC	1 cut(s)	2008
PspGI	CCWGG	4 cut(s)	216, 1155, 1416, 1905
PspLI	CGTACG	1 cut(s)	1079
PspOMI	GGGCCC	1 cut(s)	3018
PspPPI	RGGWCCY	4 cut(s)	1395, 1657, 1872, 3043
PspXI	VCTCGAGB	1 cut(s)	1038
PsrI	GAACNNNNNNTAC	2 cut(s)	2144, 2176
PstNI	CAGNNNCTG	1 cut(s)	876
PsuI	RGATCY	5 cut(s)	626, 1209, 1522, 1589, 2758
PsyI	GACNNNGTC	1 cut(s)	7
PteI	GCGCGC	2 cut(s)	2022, 2024
PvuI	CGATCG	2 cut(s)	1773, 1792
PvuII	CAGCTG	3 cut(s)	499, 522, 2837
RseI	CAYNNNNRTG	4 cut(s)	822, 1822, 2204, 3071
Rsr2I	CGGWCCG	1 cut(s)	3223
RsrII	CGGWCCG	1 cut(s)	3223
SacI	GAGCTC	4 cut(s)	363, 1433, 1769, 2889
SacII	CCGCGG	1 cut(s)	2238
SalI	GTCGAC	2 cut(s)	185, 2873
SapI	GCTCTTC	3 cut(s)	351, 503, 2606
ScaI	AGTACT	1 cut(s)	1013
SchI	GAGTC	8 cut(s)	758, 882, 1038, 1133, 1217, 1368, 1552, 1685
SduI	GDGCHC	8 cut(s)	363, 378, 679, 701, 1433, 1769, 2889, 3022
SexAI	ACCWGGT	1 cut(s)	1155
SfaNI	GCATC	6 cut(s)	823, 996, 1411, 2065, 2572, 3165
SfcI	CTRYAG	1 cut(s)	2257
SfoI	GGCGCC	1 cut(s)	2503
Sfr274I	CTCGAG	3 cut(s)	317, 362, 1038
Sfr303I	CCGCGG	1 cut(s)	2238
SfuI	TTCGAA	1 cut(s)	464
SgrAI	CRCCGGYG	1 cut(s)	1673
SgrBI	CCGCGG	1 cut(s)	2238
SgrDI	CGTCGACG	1 cut(s)	185
SlaI	CTCGAG	3 cut(s)	317, 362, 1038
SmaI	CCCGGG	1 cut(s)	2975
SmiMI	CAYNNNNRTG	4 cut(s)	822, 1822, 2204, 3071
SmlI	CTYRAG	5 cut(s)	317, 362, 1038, 1685, 2917
SmoI	CTYRAG	5 cut(s)	317, 362, 1038, 1685, 2917
SnaBI	TACGTA	1 cut(s)	2282
SphI	GCATGC	1 cut(s)	2597
Sse9I	AATT	7 cut(s)	836, 1540, 1755, 2317, 2623, 2897, 3059
SspDI	GGCGCC	1 cut(s)	2501
SspMI	CTAG	4 cut(s)	624, 1325, 3048, 3080
SstI	GAGCTC	4 cut(s)	363, 1433, 1769, 2889
StyI	CCWWGG	4 cut(s)	207, 679, 3007, 3132
TaqII	GACCGA	2 cut(s)	1151, 2860
TasI	AATT	7 cut(s)	836, 1540, 1755, 2317, 2623, 2897, 3059
TatI	WGTACW	2 cut(s)	1011, 2160
TscAI	CASTG	8 cut(s)	409, 1319, 1637, 1652, 1824, 1856, 2194, 3094
TseFI	GTSAC	4 cut(s)	194, 1283, 2476, 2829
Tsp45I	GTSAC	4 cut(s)	194, 1283, 2476, 2829
TspDTI	ATGAA	6 cut(s)	313, 881, 1009, 1637, 2057, 3055
TspGWI	ACGGA	3 cut(s)	1067, 1204, 2087
TspMI	CCCGGG	1 cut(s)	2973
TspRI	CASTG	8 cut(s)	409, 1319, 1637, 1652, 1824, 1856, 2194, 3094
Tth111I	GACNNNGTC	1 cut(s)	7
Van91I	CCANNNNNTGG	1 cut(s)	3028
XapI	RAATTY	4 cut(s)	1540, 1755, 2317, 2897
XbaI	TCTAGA	1 cut(s)	1324
XceI	RCATGY	2 cut(s)	2578, 2597
XhoI	CTCGAG	3 cut(s)	317, 362, 1038
XmaI	CCCGGG	1 cut(s)	2973
XmiI	GTMKAC	3 cut(s)	186, 2312, 2874
XmnI	GAANNNNTTC	2 cut(s)	2054, 3197
XspI	CTAG	4 cut(s)	624, 1325, 3048, 3080
ZrmI	AGTACT	1 cut(s)	1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.