Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0015951

Physical Location & Seq

Genomic Coordinates Reverse (-)

2655110 .. 2658007

Gene Structure 2898 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG035900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2898 bp

ATGGACTACGAGGAGCTCGAGATCGAGGTCCTCAACGACAAGCGCTACGGCAACAGCGGCACGGCGCGTAAGAACCACTTCCTCGGCCGGGTGAAGCTCTACGGGACTCAGTTCGCCAAGCGCGGCGACGAGGGTTTGGTGTATTTCCAGCTCGAGAAGAAGAGCGTGTTCAGTTGGATTCGAGGCGAAATCGGGCTCAGAATTTATTACTACGACGAGTTAGTGGACGAGGCGCCGCCGCAGCAGCAGCAGCAGCAACAACCGCCGCTGGAGGATCCGCCGCCGGAGAGGCCGAGGTCTCCGGCGGTTGTGGTGGTCGAGGAAGGGAGGGTGTTTGAGGTCCCTGGAGGACACGTTCAGACTACTACATTTCATGAAGGCTCGTACTCACCGCCGGTTGTGGTCACCGAGCAATCCCATCCGCAGATGGTTCATATGCACGGTCATCCTCCGCCGGGTCAGGAAATGCACGGTCAAGGACATCCGCCTCCCGGTCAGGAAATGCACGGTCATCCGCCGCCGGAGGTTCATTTTCAGTCGGAGGTGAGGAAGATGGAGACTCAGAGGGTTGCTCCGATCGGTGAGAGAGTGAGAATTCCGAGGAGGCCTAACGTCGACTTCTCTCCGAAAGTGATTCCTAGAAAGTTCGCGGCGGAGACAACGGCGGAGAGGATTCATCCCTGTGAGCTCGTCGAGCCTATGCAGTACTTGTTCATCAGAATCGTCAAGGCCCGTGGACTCGCGCCGAACGAGAGCCCCTACGTCAAGGTCCGTACAAATAGCCACCTCGTGAAGTCGAAAATGGCGGTTCACCGGCCCGGGGAGCCGACGGACTCGCCGGAGTGGAACCAGGTCTTCGCACTCGCTCACAACCGCCCTGACTCGGTGAGTTCCACATTGGAGATCTCCGTTCGCGACTCGCCGTCGGAGCAATTCTTAGGCGGCGTGTGCTTCGACCTCTCCGACGTGCCGGTCCGAGACCCACCGGACAGTCCCCTGGCTCCACAATGGTACAGACTAGAAGGAGGAGCCGGAGATCCAAACTCCGGTAAAGTATCCGGCGATATCCAGCTCTCTGTTTGGATAGGAACACAAGCCGATGACGCGTTCCCTGAAGCATGGAGCTCCGACGCACCGTACCTGTCCCACACGCGCTCCAAGGTGTACCAGTCCCCGAAGCTCTGGTATCTGAGAATGACGGTTATGGAGGTTCAGGACCTCCACATTGCATCGAATCTACCTCCGTTAACGGCTCCAGAAATCCGAGTCAAAGCTCAGCTCGGGTCTCAGTCGGCTCGAACCCGGCGCGGGTCCATGAACAACCACTGCGCCTCGTTTCACTGGAATGAGGACCTCATCTTCGTGGCGAGTGAGCCTCTCGAAGACTCGCTGATCCTGCTCGTGGAGGACCGCACCAACAAGGATCCAGTGCTCCTCGGCCACGTCGTAATTCTGGTGAACTCCATCGAGCAGAGAATCGACGAGCGCTACGTAGCGTCGAAATGGTTGCCGCTGGAAGGCAGCGGAGGCGGGCCCTACTGCGGCAGAATGCATCTCCGCCTTTGCTTGGAGGGTGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTTCGGCCCACGGCTAAGCAGCTGTGGAAGCCGGCTGTAGGCATCTTGGAGCTGGGGATTCTCGGCGCGCGCGGCTTGCTTCCGATGAAGGCTAAATCCGGTGGGAAAGGCTCCACGGACGCTTACTGTGTGGCCAAGTATGGTAAAAAATGGGTCAGGACCCGGACCGTTACGGATAGCTTCGACCCGCGCTGGAACGAACAGTACACGTGGCAAGTATATGACCCCTGCACCGTCCTCACCGTTGCTGTGTTTGACAACTGGCGCATGCTTGCTGACGTCACAGAGGAAAAGCAGGATTTCCGTATAGGGAAAATACGAATACGCATCTCCACGCTGGAGAGCAACAGGGTGTACAAGAACTCGTACCCGTTGCTGGTTTTGTCCCGGACCGGGTTAAAGAAAATGGGCGAGATAGAGCTGGCGGTCCGGTTCGCCTGCCCGTCCTTGCTACCCGAGACGTGCGCGGTTTACGGGCAGCCATTGCTGCCCAGAATGCACTACCTCCGCCCTCTCGGGGTGGCTCAGCAGGAGGCTTTACGCGGGGCAGCCACACGCATGGTGGCCGCGTGGCTCGCACGCTCCGAGCCGCCGCTGGGGCCGGAGGTGGTGCGGTACATGTTGGACGCGGACTCGCACACGTGGAGCATGAGGAAGAGCAAAGCGAATTGGTTTCGGATCGTGGCGGTGCTGGCGTGGTTGGTCGGGTTAGCCAAGTGGTTGGATGATATACGGAGGTGGAGGAACCCGGTGACGACAGTTTTGGTGCACGTGTTGTATTTGGTTCTGGTTTGGTACCCGGATTTGATAGTCCCAACCGGGTTTCTATATGTGTTTCTGATTGGTGTTTGGTACTACCGGTTCAGGCCTAAGATACCAGCTGGAATGGACCTCCGGCTCTCTCAGGCGGATACAGTCGACCCGGATGAACTTGATGAGGAGTTCGATACTTTTCCTAGCTCAAAATCTCCAGATGTGATTCGAGCCCGGTATGACCGATTAAGAATGCTGGCGGCCCGGGTCCAAACGGTTTTGGGCGACTTTGCGGCCCAGGGAGAGCGGGCCCAGGCCCTTGTGAGCTGGAGGGACCCACGTGCTACAAAGTTGTTCATAGGAGTATGCTTGCTTATCACTGTGGTGCTGTATGCTGTGCCACCCAAAATGGTTGCGGTGGCATTGGGTTTTTACTACCTGCGCCACCCGATGTTCAGAGACCCAATGCCACCGGCGAGCCTCAACTTTTTCCGGAGGCTTCCGAGTCTGTCGGACCGGTTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009506 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0030054 GO:0031224 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

965

Amino Acids

109.34

Weight (kDa)

8.29

Isoelectric Point (pI)

51.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	236 - 340	2.2e-08	C2 domain
C2	PF00168	395 - 505	4.8e-06	C2 domain
C2	PF00168	553 - 664	4.5e-19	C2 domain
PRT_C	PF08372	810 - 965	5e-72	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74720
fragaria_vesca	FvH4_5g15460
malus_domestica	MD06G1188400.v1.1
prunus_persica	Prupe.5G186600_v2.0.a1
pyrus_communis	pycom06g16700
rosa_chinensis	RchiOBHm_Chr7g0180621
rosa_laevigata	RLG00000005249
rosa_multiflora	Rmu_co8415707.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272730
rosa_rugosa	Rorug06G0434600
rosa_samantha	Rh7AG035700 Rh7BG035600 Rh7CG037300 Rh7DG035900
rosa_wichuraiana	Rw7G002940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	971
AatII	GACGTC	1 cut(s)	1899
Acc36I	ACCTGC	1 cut(s)	2817
Acc65I	GGTACC	1 cut(s)	2412
AccB1I	GGYRCC	2 cut(s)	232, 2412
AccBSI	CCGCTC	1 cut(s)	2677
AccI	GTMKAC	2 cut(s)	615, 2535
AccIII	TCCGGA	1 cut(s)	2862
AclWI	GGATC	7 cut(s)	269, 282, 1031, 1387, 1418, 1431, 2303
AcoI	YGGCCR	4 cut(s)	85, 1438, 1749, 2181
AcsI	RAATTY	2 cut(s)	201, 594
AcuI	CTGAAG	1 cut(s)	1134
AcvI	CACGTG	6 cut(s)	1585, 1606, 1827, 2259, 2389, 2711
AcyI	GRCGYC	2 cut(s)	233, 1896
AdeI	CACNNNGTG	1 cut(s)	790
AfeI	AGCGCT	2 cut(s)	44, 1487
AflIII	ACRYGT	7 cut(s)	352, 1104, 1605, 1824, 2235, 2256, 2388
AgeI	ACCGGT	2 cut(s)	2475, 2886
AhdI	GACNNNNNGTC	1 cut(s)	922
AjiI	CACGTC	3 cut(s)	967, 1444, 2079
AjnI	CCWGG	5 cut(s)	343, 849, 996, 2667, 2682
AleI	CACNNNNGTG	1 cut(s)	2753
AloI	GAACNNNNNNTCC	2 cut(s)	339, 371
Alw21I	GWGCWC	5 cut(s)	18, 690, 1127, 1434, 2388
Alw26I	GTCTC	7 cut(s)	303, 551, 650, 972, 1290, 2069, 2823
Alw44I	GTGCAC	1 cut(s)	2384
AlwI	GGATC	7 cut(s)	269, 282, 1031, 1387, 1418, 1431, 2303
Ama87I	CYCGRG	7 cut(s)	17, 152, 818, 1280, 2072, 2132, 2634
Aor13HI	TCCGGA	1 cut(s)	2862
Aor51HI	AGCGCT	2 cut(s)	44, 1487
ApaI	GGGCCC	2 cut(s)	1536, 2683
ApaLI	GTGCAC	1 cut(s)	2384
ApoI	RAATTY	2 cut(s)	201, 594
ArsI	GACNNNNNNTTYG	4 cut(s)	1343, 1375, 2362, 2394
AsiGI	ACCGGT	2 cut(s)	2475, 2886
Asp700I	GAANNNNTTC	1 cut(s)	77
Asp718I	GGTACC	1 cut(s)	2412
AvaI	CYCGRG	7 cut(s)	17, 152, 818, 1280, 2072, 2132, 2634
BaeGI	GKGCMC	3 cut(s)	1536, 2388, 2683
BalI	TGGCCA	1 cut(s)	1751
BamHI	GGATCC	2 cut(s)	274, 1423
BanI	GGYRCC	2 cut(s)	232, 2412
BanII	GRGCYC	8 cut(s)	18, 198, 690, 758, 1127, 1536, 2605, 2683
BauI	CACGAG	2 cut(s)	788, 1400
BbrPI	CACGTG	6 cut(s)	1585, 1606, 1827, 2259, 2389, 2711
BbsI	GAAGAC	2 cut(s)	847, 1389
Bbv12I	GWGCWC	5 cut(s)	18, 690, 1127, 1434, 2388
BccI	CCATC	4 cut(s)	421, 426, 547, 1472
BceAI	ACGGC	6 cut(s)	64, 78, 678, 907, 1266, 1644
BcgI	CGANNNNNNTGC	2 cut(s)	1489, 1523
BciT130I	CCWGG	5 cut(s)	345, 851, 998, 2669, 2684
BciVI	GTATCC	2 cut(s)	1066, 2521
BcoDI	GTCTC	7 cut(s)	303, 551, 650, 972, 1290, 2069, 2823
BfaI	CTAG	3 cut(s)	639, 1019, 2574
BfmI	CTRYAG	1 cut(s)	1653
BfoI	RGCGCY	3 cut(s)	46, 236, 1489
BfuAI	ACCTGC	1 cut(s)	2817
BfuI	GTATCC	2 cut(s)	1066, 2521
BglI	GCCNNNNNGGC	2 cut(s)	289, 2215
BglII	AGATCT	1 cut(s)	903
BlpI	GCTNAGC	3 cut(s)	1275, 1632, 2142
BmcAI	AGTACT	1 cut(s)	707
BmeRI	GACNNNNNGTC	1 cut(s)	922
BmeT110I	CYCGRG	7 cut(s)	17, 152, 818, 1280, 2072, 2132, 2634
BmgBI	CACGTC	3 cut(s)	967, 1444, 2079
BmsI	GCATC	4 cut(s)	1238, 1561, 1668, 1953
BpiI	GAAGAC	2 cut(s)	847, 1389
BplI	GAGNNNNNCTC	4 cut(s)	556, 588, 1360, 1392
BpmI	CTGGAG	6 cut(s)	290, 366, 1239, 1976, 2571, 2719
Bpu1102I	GCTNAGC	3 cut(s)	1275, 1632, 2142
BsaAI	YACGTR	7 cut(s)	1492, 1585, 1606, 1827, 2259, 2389, 2711
BsaHI	GRCGYC	2 cut(s)	233, 1896
BsaI	GGTCTC	4 cut(s)	303, 972, 1290, 2823
BsaWI	WCCGGW	7 cut(s)	985, 1046, 1715, 2046, 2475, 2862, 2886
BsaXI	ACNNNNNCTCC	6 cut(s)	339, 369, 1139, 1169, 1562, 1592
Bse118I	RCCGGY	7 cut(s)	394, 813, 970, 1648, 2475, 2842, 2886
Bse1I	ACTGG	4 cut(s)	1168, 1346, 1427, 1883
Bse3DI	GCAATG	2 cut(s)	1224, 2099
BseAI	TCCGGA	1 cut(s)	2862
BseBI	CCWGG	5 cut(s)	345, 851, 998, 2669, 2684
BseGI	GGATG	7 cut(s)	418, 445, 481, 511, 676, 2347, 2548
BseMI	GCAATG	2 cut(s)	1224, 2099
BseMII	CTCAG	8 cut(s)	122, 211, 575, 1181, 1289, 1301, 2156, 2534
BseNI	ACTGG	4 cut(s)	1168, 1346, 1427, 1883
BsePI	GCGCGC	2 cut(s)	1683, 1685
BseRI	GAGGAG	5 cut(s)	26, 616, 1041, 1424, 2570
BseSI	GKGCMC	3 cut(s)	1536, 2388, 2683
BseX3I	CGGCCG	1 cut(s)	85
BseYI	CCCAGC	2 cut(s)	1669, 2212
BsgI	GTGCAG	2 cut(s)	1630, 1831
Bsh1285I	CGRYCG	2 cut(s)	88, 579
BshNI	GGYRCC	2 cut(s)	232, 2412
BshTI	ACCGGT	2 cut(s)	2475, 2886
BsiEI	CGRYCG	2 cut(s)	88, 579
BsiHKAI	GWGCWC	5 cut(s)	18, 690, 1127, 1434, 2388
BsiHKCI	CYCGRG	7 cut(s)	17, 152, 818, 1280, 2072, 2132, 2634
BslFI	GGGAC	8 cut(s)	118, 326, 978, 1129, 1156, 1987, 2414, 2717
BsmAI	GTCTC	7 cut(s)	303, 551, 650, 972, 1290, 2069, 2823
BsmBI	CGTCTC	1 cut(s)	2069
BsmFI	GGGAC	8 cut(s)	118, 326, 978, 1129, 1156, 1987, 2414, 2717
BsmI	GAATGC	3 cut(s)	1554, 2118, 2628
Bso31I	GGTCTC	4 cut(s)	303, 972, 1290, 2823
BsoBI	CYCGRG	7 cut(s)	17, 152, 818, 1280, 2072, 2132, 2634
Bsp120I	GGGCCC	2 cut(s)	1532, 2679
Bsp13I	TCCGGA	1 cut(s)	2862
Bsp1407I	TGTACA	1 cut(s)	1971
Bsp143I	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
Bsp1720I	GCTNAGC	3 cut(s)	1275, 1632, 2142
Bsp68I	TCGCGA	1 cut(s)	915
BspCNI	CTCAG	8 cut(s)	121, 210, 574, 1182, 1288, 1300, 2155, 2533
BspEI	TCCGGA	1 cut(s)	2862
BspHI	TCATGA	1 cut(s)	373
BspMI	ACCTGC	1 cut(s)	2817
BspPI	GGATC	7 cut(s)	269, 282, 1031, 1387, 1418, 1431, 2303
BspQI	GCTCTTC	2 cut(s)	155, 2267
BspT107I	GGYRCC	2 cut(s)	232, 2412
BspTNI	GGTCTC	4 cut(s)	303, 972, 1290, 2823
BsrBI	CCGCTC	1 cut(s)	2677
BsrDI	GCAATG	2 cut(s)	1224, 2099
BsrFI	RCCGGY	7 cut(s)	394, 813, 970, 1648, 2475, 2842, 2886
BsrGI	TGTACA	1 cut(s)	1971
BsrI	ACTGG	4 cut(s)	1168, 1346, 1427, 1883
BssAI	RCCGGY	7 cut(s)	394, 813, 970, 1648, 2475, 2842, 2886
BssHII	GCGCGC	2 cut(s)	1683, 1685
BssMI	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
BssNI	GRCGYC	2 cut(s)	233, 1896
BssSI	CACGAG	2 cut(s)	788, 1400
BssT1I	CCWWGG	1 cut(s)	1158
Bst2BI	CACGAG	2 cut(s)	788, 1400
Bst2UI	CCWGG	5 cut(s)	345, 851, 998, 2669, 2684
Bst6I	CTCTTC	2 cut(s)	155, 2267
BstACI	GRCGYC	2 cut(s)	233, 1896
BstAPI	GCANNNNNTGC	1 cut(s)	2101
BstAUI	TGTACA	1 cut(s)	1971
BstBAI	YACGTR	7 cut(s)	1492, 1585, 1606, 1827, 2259, 2389, 2711
BstDSI	CCRYGG	3 cut(s)	733, 1626, 1731
BstEII	GGTNACC	1 cut(s)	403
BstF5I	GGATG	7 cut(s)	418, 445, 481, 511, 676, 2347, 2548
BstH2I	RGCGCY	3 cut(s)	46, 236, 1489
BstKTI	GATC	8 cut(s)	24, 277, 579, 906, 1039, 1395, 1426, 2298
BstMAI	GTCTC	7 cut(s)	303, 551, 650, 972, 1290, 2069, 2823
BstMBI	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
BstMCI	CGRYCG	2 cut(s)	88, 579
BstNI	CCWGG	5 cut(s)	345, 851, 998, 2669, 2684
BstNSI	RCATGY	2 cut(s)	1888, 2239
BstPI	GGTNACC	1 cut(s)	403
BstSFI	CTRYAG	1 cut(s)	1653
BstSLI	GKGCMC	3 cut(s)	1536, 2388, 2683
BstSNI	TACGTA	1 cut(s)	1492
BstV2I	GAAGAC	2 cut(s)	847, 1389
BstX2I	RGATCY	4 cut(s)	274, 903, 1036, 1423
BstXI	CCANNNNNNTGG	2 cut(s)	2176, 2338
BstYI	RGATCY	4 cut(s)	274, 903, 1036, 1423
BstZI	CGGCCG	1 cut(s)	85
BsuI	GTATCC	2 cut(s)	1066, 2521
BtgI	CCRYGG	3 cut(s)	733, 1626, 1731
BtrI	CACGTC	3 cut(s)	967, 1444, 2079
BtsCI	GGATG	7 cut(s)	418, 445, 481, 511, 676, 2347, 2548
BtsI	GCAGTG	1 cut(s)	1324
BtsIMutI	CAGTG	4 cut(s)	1324, 1339, 1434, 2748
BtuMI	TCGCGA	1 cut(s)	915
BveI	ACCTGC	1 cut(s)	2817
CciI	TCATGA	1 cut(s)	373
Cfr10I	RCCGGY	7 cut(s)	394, 813, 970, 1648, 2475, 2842, 2886
Cfr9I	CCCGGG	2 cut(s)	818, 2634
CpoI	CGGWCCG	5 cut(s)	973, 1782, 2007, 2044, 2884
CseI	GACGC	5 cut(s)	1112, 1139, 1485, 1745, 2252
CsiI	ACCWGGT	1 cut(s)	849
CspAI	ACCGGT	2 cut(s)	2475, 2886
CspCI	CAANNNNNGTGG	2 cut(s)	715, 750
CspI	CGGWCCG	5 cut(s)	973, 1782, 2007, 2044, 2884
CviAII	CATG	7 cut(s)	374, 1119, 1315, 1885, 2176, 2236, 2266
DinI	GGCGCC	1 cut(s)	234
DpnI	GATC	8 cut(s)	23, 276, 578, 905, 1038, 1394, 1425, 2297
DpnII	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
DraIII	CACNNNGTG	1 cut(s)	790
DrdI	GACNNNNNNGTC	1 cut(s)	971
DriI	GACNNNNNGTC	1 cut(s)	922
DseDI	GACNNNNNNGTC	1 cut(s)	971
EaeI	YGGCCR	4 cut(s)	85, 1438, 1749, 2181
EagI	CGGCCG	1 cut(s)	85
Eam1104I	CTCTTC	2 cut(s)	155, 2267
Eam1105I	GACNNNNNGTC	1 cut(s)	922
EarI	CTCTTC	2 cut(s)	155, 2267
EciI	GGCGGA	9 cut(s)	267, 441, 474, 504, 668, 680, 1547, 2114, 2540
Ecl136II	GAGCTC	3 cut(s)	16, 688, 1125
EclXI	CGGCCG	1 cut(s)	85
Eco105I	TACGTA	1 cut(s)	1492
Eco130I	CCWWGG	1 cut(s)	1158
Eco147I	AGGCCT	2 cut(s)	607, 2485
Eco24I	GRGCYC	8 cut(s)	18, 198, 690, 758, 1127, 1536, 2605, 2683
Eco31I	GGTCTC	4 cut(s)	303, 972, 1290, 2823
Eco32I	GATATC	1 cut(s)	1066
Eco47III	AGCGCT	2 cut(s)	44, 1487
Eco52I	CGGCCG	1 cut(s)	85
Eco53kI	GAGCTC	3 cut(s)	16, 688, 1125
Eco57I	CTGAAG	1 cut(s)	1134
Eco72I	CACGTG	6 cut(s)	1585, 1606, 1827, 2259, 2389, 2711
Eco88I	CYCGRG	7 cut(s)	17, 152, 818, 1280, 2072, 2132, 2634
Eco91I	GGTNACC	1 cut(s)	403
EcoICRI	GAGCTC	3 cut(s)	16, 688, 1125
EcoO109I	RGGNCCY	8 cut(s)	28, 340, 1216, 1351, 1533, 1776, 2686, 2704
EcoO65I	GGTNACC	1 cut(s)	403
EcoRI	GAATTC	1 cut(s)	594
EcoRII	CCWGG	5 cut(s)	343, 849, 996, 2667, 2682
EcoRV	GATATC	1 cut(s)	1066
EcoT14I	CCWWGG	1 cut(s)	1158
EcoT22I	ATGCAT	1 cut(s)	1554
EcoT38I	GRGCYC	8 cut(s)	18, 198, 690, 758, 1127, 1536, 2605, 2683
EgeI	GGCGCC	1 cut(s)	234
EheI	GGCGCC	1 cut(s)	234
ErhI	CCWWGG	1 cut(s)	1158
Esp3I	CGTCTC	1 cut(s)	2069
FaeI	CATG	7 cut(s)	377, 1122, 1318, 1888, 2179, 2239, 2269
FalI	AAGNNNNNCTT	2 cut(s)	62, 94
FaqI	GGGAC	8 cut(s)	118, 326, 978, 1129, 1156, 1987, 2414, 2717
FatI	CATG	7 cut(s)	373, 1118, 1314, 1884, 2175, 2235, 2265
FauI	CCCGC	5 cut(s)	1301, 1523, 1812, 2153, 2670
FauNDI	CATATG	1 cut(s)	435
FblI	GTMKAC	2 cut(s)	615, 2535
FokI	GGATG	7 cut(s)	405, 432, 468, 498, 663, 2354, 2555
FriOI	GRGCYC	8 cut(s)	18, 198, 690, 758, 1127, 1536, 2605, 2683
FspBI	CTAG	3 cut(s)	639, 1019, 2574
GsaI	CCCAGC	2 cut(s)	1673, 2216
GsuI	CTGGAG	6 cut(s)	290, 366, 1239, 1976, 2571, 2719
HaeII	RGCGCY	3 cut(s)	46, 236, 1489
HgaI	GACGC	5 cut(s)	1112, 1139, 1485, 1745, 2252
Hin1I	GRCGYC	2 cut(s)	233, 1896
Hin1II	CATG	7 cut(s)	377, 1122, 1318, 1888, 2179, 2239, 2269
HincII	GTYRAC	3 cut(s)	616, 1248, 2536
HindII	GTYRAC	3 cut(s)	616, 1248, 2536
HpaI	GTTAAC	1 cut(s)	1248
HpyAV	CCTTC	5 cut(s)	317, 371, 1016, 1511, 1699
Hsp92I	GRCGYC	2 cut(s)	233, 1896
Hsp92II	CATG	7 cut(s)	377, 1122, 1318, 1888, 2179, 2239, 2269
KasI	GGCGCC	1 cut(s)	232
KflI	GGGWCCC	1 cut(s)	2704
Kpn2I	TCCGGA	1 cut(s)	2862
KpnI	GGTACC	1 cut(s)	2416
KroI	GCCGGC	1 cut(s)	1648
KroNI	GCCGGC	1 cut(s)	1650
KspAI	GTTAAC	1 cut(s)	1248
Kzo9I	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
LguI	GCTCTTC	2 cut(s)	155, 2267
LweI	GCATC	4 cut(s)	1238, 1561, 1668, 1953
MabI	ACCWGGT	1 cut(s)	849
MaeI	CTAG	3 cut(s)	639, 1019, 2574
MaeIII	GTNAC	4 cut(s)	403, 1786, 1897, 2368
MalI	GATC	8 cut(s)	23, 276, 578, 905, 1038, 1394, 1425, 2297
MauBI	CGCGCGCG	1 cut(s)	1685
MbiI	CCGCTC	1 cut(s)	2677
MboI	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
MboII	GAAGA	7 cut(s)	169, 172, 562, 847, 1351, 1394, 2284
MflI	RGATCY	4 cut(s)	274, 903, 1036, 1423
MlsI	TGGCCA	1 cut(s)	1751
MluCI	AATT	5 cut(s)	201, 594, 932, 1449, 2284
MluI	ACGCGT	1 cut(s)	1104
MluNI	TGGCCA	1 cut(s)	1751
Mly113I	GGCGCC	1 cut(s)	233
MmeI	TCCRAC	8 cut(s)	155, 519, 906, 987, 1152, 2220, 2319, 2862
Mox20I	TGGCCA	1 cut(s)	1751
Mph1103I	ATGCAT	1 cut(s)	1554
MroI	TCCGGA	1 cut(s)	2862
MroNI	GCCGGC	1 cut(s)	1648
MroXI	GAANNNNTTC	1 cut(s)	77
MscI	TGGCCA	1 cut(s)	1751
MseI	TTAA	4 cut(s)	1247, 2015, 2618, 2891
MslI	CAYNNNNRTG	5 cut(s)	681, 1344, 1361, 2174, 2753
Msp20I	TGGCCA	1 cut(s)	1751
MspA1I	CMGCKG	7 cut(s)	57, 268, 1513, 1524, 1639, 2212, 2498
Mva1269I	GAATGC	3 cut(s)	1554, 2118, 2628
MvaI	CCWGG	5 cut(s)	345, 851, 998, 2669, 2684
NaeI	GCCGGC	1 cut(s)	1650
NarI	GGCGCC	1 cut(s)	233
NdeI	CATATG	1 cut(s)	435
NdeII	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
NgoMIV	GCCGGC	1 cut(s)	1648
NlaIII	CATG	7 cut(s)	377, 1122, 1318, 1888, 2179, 2239, 2269
NmeAIII	GCCGAG	4 cut(s)	63, 318, 1416, 1659
NmuCI	GTSAC	3 cut(s)	403, 1897, 2368
NruI	TCGCGA	1 cut(s)	915
NsiI	ATGCAT	1 cut(s)	1554
NspI	RCATGY	2 cut(s)	1888, 2239
OliI	CACNNNNGTG	1 cut(s)	2753
PaeI	GCATGC	1 cut(s)	1888
PaeR7I	CTCGAG	2 cut(s)	17, 152
PagI	TCATGA	1 cut(s)	373
PasI	CCCWGGG	1 cut(s)	2668
PauI	GCGCGC	2 cut(s)	1683, 1685
PceI	AGGCCT	2 cut(s)	607, 2485
PciI	ACATGT	1 cut(s)	2235
PciSI	GCTCTTC	2 cut(s)	155, 2267
PcsI	WCGNNNNNNNCGW	8 cut(s)	15, 747, 960, 1443, 1488, 1590, 1611, 2199
PctI	GAATGC	3 cut(s)	1554, 2118, 2628
PdiI	GCCGGC	1 cut(s)	1650
PdmI	GAANNNNTTC	1 cut(s)	77
PfeI	GAWTC	8 cut(s)	178, 634, 673, 720, 1234, 1476, 1675, 2596
PfoI	TCCNGGA	1 cut(s)	2003
PinAI	ACCGGT	2 cut(s)	2475, 2886
Ple19I	CGATCG	1 cut(s)	579
PluTI	GGCGCC	1 cut(s)	236
PmaCI	CACGTG	6 cut(s)	1585, 1606, 1827, 2259, 2389, 2711
PmlI	CACGTG	6 cut(s)	1585, 1606, 1827, 2259, 2389, 2711
Ppu21I	YACGTR	7 cut(s)	1492, 1585, 1606, 1827, 2259, 2389, 2711
PpuMI	RGGWCCY	6 cut(s)	28, 340, 1216, 1351, 1776, 2704
PscI	ACATGT	1 cut(s)	2235
Psp124BI	GAGCTC	3 cut(s)	18, 690, 1127
Psp5II	RGGWCCY	6 cut(s)	28, 340, 1216, 1351, 1776, 2704
Psp6I	CCWGG	5 cut(s)	343, 849, 996, 2667, 2682
PspCI	CACGTG	6 cut(s)	1585, 1606, 1827, 2259, 2389, 2711
PspEI	GGTNACC	1 cut(s)	403
PspFI	CCCAGC	2 cut(s)	1669, 2212
PspGI	CCWGG	5 cut(s)	343, 849, 996, 2667, 2682
PspOMI	GGGCCC	2 cut(s)	1532, 2679
PspPPI	RGGWCCY	6 cut(s)	28, 340, 1216, 1351, 1776, 2704
PsrI	GAACNNNNNNTAC	4 cut(s)	1805, 1837, 2462, 2494
PsuI	RGATCY	4 cut(s)	274, 903, 1036, 1423
PteI	GCGCGC	2 cut(s)	1683, 1685
PvuI	CGATCG	1 cut(s)	579
PvuII	CAGCTG	2 cut(s)	1639, 2498
RruI	TCGCGA	1 cut(s)	915
RseI	CAYNNNNRTG	5 cut(s)	681, 1344, 1361, 2174, 2753
Rsr2I	CGGWCCG	5 cut(s)	973, 1782, 2007, 2044, 2884
RsrII	CGGWCCG	5 cut(s)	973, 1782, 2007, 2044, 2884
SacI	GAGCTC	3 cut(s)	18, 690, 1127
SalI	GTCGAC	2 cut(s)	614, 2534
SapI	GCTCTTC	2 cut(s)	155, 2267
SaqAI	TTAA	4 cut(s)	1247, 2015, 2618, 2891
Sau3AI	GATC	8 cut(s)	21, 274, 576, 903, 1036, 1392, 1423, 2295
ScaI	AGTACT	1 cut(s)	707
SexAI	ACCWGGT	1 cut(s)	849
SfaNI	GCATC	4 cut(s)	1238, 1561, 1668, 1953
SfcI	CTRYAG	1 cut(s)	1653
SfoI	GGCGCC	1 cut(s)	234
Sfr274I	CTCGAG	2 cut(s)	17, 152
SgrAI	CRCCGGYG	1 cut(s)	2842
SlaI	CTCGAG	2 cut(s)	17, 152
SmaI	CCCGGG	2 cut(s)	820, 2636
SmiMI	CAYNNNNRTG	5 cut(s)	681, 1344, 1361, 2174, 2753
SmlI	CTYRAG	2 cut(s)	17, 152
SmoI	CTYRAG	2 cut(s)	17, 152
SnaBI	TACGTA	1 cut(s)	1492
SphI	GCATGC	1 cut(s)	1888
Sse9I	AATT	5 cut(s)	201, 594, 932, 1449, 2284
SseBI	AGGCCT	2 cut(s)	607, 2485
SspDI	GGCGCC	1 cut(s)	232
SspMI	CTAG	3 cut(s)	639, 1019, 2574
SstI	GAGCTC	3 cut(s)	18, 690, 1127
StuI	AGGCCT	2 cut(s)	607, 2485
StyI	CCWWGG	1 cut(s)	1158
TaqII	GACCGA	1 cut(s)	2628
TasI	AATT	5 cut(s)	201, 594, 932, 1449, 2284
TatI	WGTACW	3 cut(s)	705, 1821, 1971
TfiI	GAWTC	8 cut(s)	178, 634, 673, 720, 1234, 1476, 1675, 2596
Tru1I	TTAA	4 cut(s)	1247, 2015, 2618, 2891
Tru9I	TTAA	4 cut(s)	1247, 2015, 2618, 2891
TscAI	CASTG	4 cut(s)	1331, 1346, 1434, 2755
TseFI	GTSAC	3 cut(s)	403, 1897, 2368
Tsp45I	GTSAC	3 cut(s)	403, 1897, 2368
TspGWI	ACGGA	8 cut(s)	761, 845, 898, 1233, 1748, 1805, 1910, 2365
TspMI	CCCGGG	2 cut(s)	818, 2634
TspRI	CASTG	4 cut(s)	1331, 1346, 1434, 2755
VneI	GTGCAC	1 cut(s)	2384
XapI	RAATTY	2 cut(s)	201, 594
XceI	RCATGY	2 cut(s)	1888, 2239
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2176
XhoI	CTCGAG	2 cut(s)	17, 152
XmaI	CCCGGG	2 cut(s)	818, 2634
XmiI	GTMKAC	2 cut(s)	615, 2535
XmnI	GAANNNNTTC	1 cut(s)	77
XspI	CTAG	3 cut(s)	639, 1019, 2574
ZraI	GACGTC	1 cut(s)	1897
ZrmI	AGTACT	1 cut(s)	707
Zsp2I	ATGCAT	1 cut(s)	1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.