RchiOBHm_Chr7g0180621

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
2478214 .. 2481965
3752 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16108

Sequence Viewer

Length: 3219 bp
ATGACCGGAACGGTGTCGTTTCAGCAAACCCCACCCCAGCACTCCCACTCCCAACCCCAACCCCAACCCCAGCCCCAGCCCCAGCCACAGCCAGAACCACCGCAACCGCAACAGCCACCTCAGCCGCAGAGGGCGATCAGGAAGCTCGTCGTGGAAGTGGTGGACGCACTTAACCTTTTACCTAAAGATGGCCAGGGGAGCTCCAGCGCTTACGTGGTGGCGGACTTCGACGGCCAGCGGAAGCGGACGGCCACCAAATGCAAGGACCTCAACCCCGTCTGGAACGAGCCGCTCGAGTTCGTCGTCTCCGACCCTGACAACATGGACTACGAGGAGCTCGAGATCGAGGTCCTCAACGACAAGCGCTACGGCAACAGCGGCACGGCGCGTAAGAACCACTTCCTCGGCCGGGTGAAGCTCTACGGGACTCAGTTCGCCAAGCGCGGCGACGAGGGTTTGGTGTATTTCCAGCTCGAGAAGAAGAGCGTGTTCAGTTGGATTCGAGGCGAAATCGGGCTCAGAATTTATTACTACGACGAGTTAGTGGACGAGGCGCCGCCGCAGCAGCAGCAGCAGCAACAACCGCCGCTGGAGGATCCGCCGCCGGAGAGGCCGAGGTCTCCGGCGGTTGTGGTGGTCGAGGAAGGGAGGGTGTTTGAGGTCCCTGGAGGACACGTTCAGACTACTACATTTCATGAAGGCTCGTACTCACCGCCGGTTGTGGTCACCGAGCAATCCCATCCGCAGATGGTTCATATGCACGGTCATCCTCCGCCGGGTCAGGAAATGCACGGTCAAGGACATCCGCCTCCCGGTCAGGAAATGCACGGTCATCCGCCGCCGGAGGTTCATTTTCAGTCGGAGGTGAGGAAGATGGAGACTCAGAGGGTTGCTCCGATCGGTGAGAGAGTGAGAATTCCGAGGAGGCCTAACGTCGACTTCTCTCCGAAAGTGATTCCTAGAAAGTTCGCGGCGGAGACAACGGCGGAGAGGATTCATCCCTGTGAGCTCGTCGAGCCTATGCAGTACTTGTTCATCAGAATCGTCAAGGCCCGTGGACTCGCGCCGAACGAGAGCCCCTACGTCAAGGTCCGTACAAATAGCCACCTCGTGAAGTCGAAAATGGCGGTTCACCGGCCCGGGGAGCCGACGGACTCGCCGGAGTGGAACCAGGTCTTCGCACTCGCTCACAACCGCCCTGACTCGGTGAGTTCCACATTGGAGATCTCCGTTCGCGACTCGCCGTCGGAGCAATTCTTAGGCGGCGTGTGCTTCGACCTCTCCGACGTGCCGGTCCGAGACCCACCGGACAGTCCCCTGGCTCCACAATGGTACAGACTAGAAGGAGGAGCCGGAGATCCAAACTCCGGTAAAGTATCCGGCGATATCCAGCTCTCTGTTTGGATAGGAACACAAGCCGATGACGCGTTCCCTGAAGCATGGAGCTCCGACGCACCGTACCTGTCCCACACGCGCTCCAAGGTGTACCAGTCCCCGAAGCTCTGGTATCTGAGAATGACGGTTATGGAGGTTCAGGACCTCCACATTGCATCGAATCTACCTCCGTTAACGGCTCCAGAAATCCGAGTCAAAGCTCAGCTCGGGTCTCAGTCGGCTCGAACCCGGCGCGGGTCCATGAACAACCACTGCGCCTCGTTTCACTGGAATGAGGACCTCATCTTCGTGGCGAGTGAGCCTCTCGAAGACTCGCTGATCCTGCTCGTGGAGGACCGCACCAACAAGGATCCAGTGCTCCTCGGCCACGTCGTAATTCTGGTGAACTCCATCGAGCAGAGAATCGACGAGCGCTACGTAGCGTCGAAATGGTTGCCGCTGGAAGGCAGCGGAGGCGGGCCCTACTGCGGCAGAATGCATCTCCGCCTTTGCTTGGAGGGTGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTTCGGCCCACGGCTAAGCAGCTGTGGAAGCCGGCTGTAGGCATCTTGGAGCTGGGGATTCTCGGCGCGCGCGGCTTGCTTCCGATGAAGGCTAAATCCGGTGGGAAAGGCTCCACGGACGCTTACTGTGTGGCCAAGTATGGTAAAAAATGGGTCAGGACCCGGACCGTTACGGATAGCTTCGACCCGCGCTGGAACGAACAGTACACGTGGCAAGTATATGACCCCTGCACCGTCCTCACCGTTGCTGTGTTTGACAACTGGCGCATGCTTGCTGACGTCACAGAGGAAAAGCAGGATTTCCGTATAGGGAAAATACGAATACGCATCTCCACGCTGGAGAGCAACAGGGTGTACAAGAACTCGTACCCGTTGCTGGTTTTGTCCCGGACCGGGTTAAAGAAAATGGGCGAGATAGAGCTGGCGGTCCGGTTCGCCTGCCCGTCCTTGCTACCCGAGACGTGCGCGGTTTACGGGCAGCCATTGCTGCCCAGAATGCACTACCTCCGCCCTCTCGGGGTGGCTCAGCAGGAGGCTTTACGCGGGGCAGCCACACGCATGGTGGCCGCGTGGCTCGCACGCTCCGAGCCGCCGCTGGGGCCGGAGGTGGTGCGGTACATGTTGGACGCGGACTCGCACACGTGGAGCATGAGGAAGAGCAAAGCGAATTGGTTTCGGATCGTGGCGGTGCTGGCGTGGTTGGTCGGGTTAGCCAAGTGGTTGGATGATATACGGAGGTGGAGGAACCCGGTGACGACAGTTTTGGTGCACGTGTTGTATTTGGTTCTGGTTTGGTACCCGGATTTGATAGTCCCAACCGGGTTTCTATATGTGTTTCTGATTGGTGTTTGGTACTACCGGTTCAGGCCTAAGATACCAGCTGGAATGGACCTCCGGCTCTCTCAGGCGGATACAGTCGACCCGGATGAACTTGATGAGGAGTTCGATACTTTTCCTAGCTCAAAATCTCCAGATGTGATTCGAGCCCGGTATGACCGATTAAGAATGCTGGCGGCCCGGGTCCAAACGGTTTTGGGCGACTTTGCGGCCCAGGGAGAGCGGGCCCAGGCCCTTGTGAGCTGGAGGGACCCACGTGCTACAAAGTTGTTCATAGGAGTATGCTTGCTTATCACTGTGGTGCTGTATGCTGTGCCACCCAAAATGGTTGCGGTGGCATTGGGTTTTTACTACCTGCGCCACCCGATGTTCAGAGACCCAATGCCACCGGCGAGCCTCAACTTTTTCCGGAGGCTTCCGAGTCTGTCGGACCGGTTAATGTAG

Protein Analysis

1072

Amino Acids

121.19

Weight (kDa)

7.9

Isoelectric Point (pI)

53.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 48 - 141 1.8e-16 C2 domain
C2 PF00168 343 - 447 2.5e-08 C2 domain
C2 PF00168 502 - 612 5.6e-06 C2 domain
C2 PF00168 660 - 771 5.2e-19 C2 domain
PRT_C PF08372 917 - 1072 5.8e-72 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015951)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74720
fragaria_vesca FvH4_5g15460
malus_domestica MD06G1188400.v1.1
prunus_persica Prupe.5G186600_v2.0.a1
pyrus_communis pycom06g16700
rosa_chinensis RchiOBHm_Chr7g0180621
rosa_laevigata RLG00000005249
rosa_multiflora Rmu_co8415707.1_g000001
rosa_roxburghii Rroxscaffold_3G00272730
rosa_rugosa Rorug06G0434600
rosa_samantha Rh7AG035700 Rh7BG035600 Rh7CG037300 Rh7DG035900
rosa_wichuraiana Rw7G002940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1292
AatII GACGTC 1 cut(s) 2220
Acc36I ACCTGC 1 cut(s) 3138
Acc65I GGTACC 1 cut(s) 2733
AccB1I GGYRCC 2 cut(s) 553, 2733
AccBSI CCGCTC 2 cut(s) 292, 2998
AccI GTMKAC 2 cut(s) 936, 2856
AccIII TCCGGA 1 cut(s) 3183
AclWI GGATC 7 cut(s) 590, 603, 1352, 1708, 1739, 1752, 2624
AcoI YGGCCR 7 cut(s) 190, 232, 249, 406, 1759, 2070, 2502
AcsI RAATTY 2 cut(s) 522, 915
AcuI CTGAAG 1 cut(s) 1455
AcvI CACGTG 6 cut(s) 1906, 1927, 2148, 2580, 2710, 3032
AcyI GRCGYC 2 cut(s) 554, 2217
AdeI CACNNNGTG 1 cut(s) 1111
AfeI AGCGCT 3 cut(s) 208, 365, 1808
AflIII ACRYGT 7 cut(s) 673, 1425, 1926, 2145, 2556, 2577, 2709
AgeI ACCGGT 2 cut(s) 2796, 3207
AhdI GACNNNNNGTC 1 cut(s) 1243
AjiI CACGTC 3 cut(s) 1288, 1765, 2400
AjnI CCWGG 6 cut(s) 192, 664, 1170, 1317, 2988, 3003
AleI CACNNNNGTG 1 cut(s) 3074
AloI GAACNNNNNNTCC 2 cut(s) 660, 692
Alw21I GWGCWC 6 cut(s) 203, 339, 1011, 1448, 1755, 2709
Alw26I GTCTC 8 cut(s) 310, 624, 872, 971, 1293, 1611, 2390, 3144
Alw44I GTGCAC 1 cut(s) 2705
AlwI GGATC 7 cut(s) 590, 603, 1352, 1708, 1739, 1752, 2624
Ama87I CYCGRG 8 cut(s) 293, 338, 473, 1139, 1601, 2393, 2453, 2955
Aor13HI TCCGGA 1 cut(s) 3183
Aor51HI AGCGCT 3 cut(s) 208, 365, 1808
ApaI GGGCCC 2 cut(s) 1857, 3004
ApaLI GTGCAC 1 cut(s) 2705
ApoI RAATTY 2 cut(s) 522, 915
ArsI GACNNNNNNTTYG 4 cut(s) 1664, 1696, 2683, 2715
AsiGI ACCGGT 2 cut(s) 2796, 3207
Asp700I GAANNNNTTC 1 cut(s) 398
Asp718I GGTACC 1 cut(s) 2733
AvaI CYCGRG 8 cut(s) 293, 338, 473, 1139, 1601, 2393, 2453, 2955
BaeGI GKGCMC 3 cut(s) 1857, 2709, 3004
BalI TGGCCA 2 cut(s) 192, 2072
BamHI GGATCC 2 cut(s) 595, 1744
BanI GGYRCC 2 cut(s) 553, 2733
BanII GRGCYC 9 cut(s) 203, 339, 519, 1011, 1079, 1448, 1857, 2926, 3004
BauI CACGAG 2 cut(s) 1109, 1721
BbrPI CACGTG 6 cut(s) 1906, 1927, 2148, 2580, 2710, 3032
BbsI GAAGAC 2 cut(s) 1168, 1710
Bbv12I GWGCWC 6 cut(s) 203, 339, 1011, 1448, 1755, 2709
BbvCI CCTCAGC 1 cut(s) 120
BccI CCATC 5 cut(s) 182, 742, 747, 868, 1793
BceAI ACGGC 8 cut(s) 247, 264, 385, 399, 999, 1228, 1587, 1965
BcgI CGANNNNNNTGC 2 cut(s) 1810, 1844
BciT130I CCWGG 6 cut(s) 194, 666, 1172, 1319, 2990, 3005
BciVI GTATCC 2 cut(s) 1387, 2842
BcoDI GTCTC 8 cut(s) 310, 624, 872, 971, 1293, 1611, 2390, 3144
BfaI CTAG 3 cut(s) 960, 1340, 2895
BfmI CTRYAG 1 cut(s) 1974
BfoI RGCGCY 4 cut(s) 210, 367, 557, 1810
BfuAI ACCTGC 1 cut(s) 3138
BfuI GTATCC 2 cut(s) 1387, 2842
BglI GCCNNNNNGGC 2 cut(s) 610, 2536
BglII AGATCT 1 cut(s) 1224
BlpI GCTNAGC 3 cut(s) 1596, 1953, 2463
BmcAI AGTACT 1 cut(s) 1028
BmeRI GACNNNNNGTC 1 cut(s) 1243
BmeT110I CYCGRG 8 cut(s) 293, 338, 473, 1139, 1601, 2393, 2453, 2955
BmgBI CACGTC 3 cut(s) 1288, 1765, 2400
BmsI GCATC 4 cut(s) 1559, 1882, 1989, 2274
BpiI GAAGAC 2 cut(s) 1168, 1710
BplI GAGNNNNNCTC 4 cut(s) 877, 909, 1681, 1713
BpmI CTGGAG 7 cut(s) 187, 611, 687, 1560, 2297, 2892, 3040
Bpu10I CCTNAGC 1 cut(s) 120
Bpu1102I GCTNAGC 3 cut(s) 1596, 1953, 2463
BsaAI YACGTR 8 cut(s) 214, 1813, 1906, 1927, 2148, 2580, 2710, 3032
BsaHI GRCGYC 2 cut(s) 554, 2217
BsaI GGTCTC 4 cut(s) 624, 1293, 1611, 3144
BsaWI WCCGGW 8 cut(s) 5, 1306, 1367, 2036, 2367, 2796, 3183, 3207
BsaXI ACNNNNNCTCC 8 cut(s) 32, 62, 660, 690, 1460, 1490, 1883, 1913
Bse118I RCCGGY 7 cut(s) 715, 1134, 1291, 1969, 2796, 3163, 3207
Bse1I ACTGG 4 cut(s) 1489, 1667, 1748, 2204
Bse3DI GCAATG 2 cut(s) 1545, 2420
BseAI TCCGGA 1 cut(s) 3183
BseBI CCWGG 6 cut(s) 194, 666, 1172, 1319, 2990, 3005
BseGI GGATG 7 cut(s) 739, 766, 802, 832, 997, 2668, 2869
BseMI GCAATG 2 cut(s) 1545, 2420
BseMII CTCAG 9 cut(s) 134, 443, 532, 896, 1502, 1610, 1622, 2477, 2855
BseNI ACTGG 4 cut(s) 1489, 1667, 1748, 2204
BsePI GCGCGC 2 cut(s) 2004, 2006
BseRI GAGGAG 5 cut(s) 347, 937, 1362, 1745, 2891
BseSI GKGCMC 3 cut(s) 1857, 2709, 3004
BseX3I CGGCCG 1 cut(s) 406
BseYI CCCAGC 6 cut(s) 36, 69, 75, 81, 1990, 2533
BsgI GTGCAG 2 cut(s) 1951, 2152
Bsh1285I CGRYCG 2 cut(s) 409, 900
BshNI GGYRCC 2 cut(s) 553, 2733
BshTI ACCGGT 2 cut(s) 2796, 3207
BsiEI CGRYCG 2 cut(s) 409, 900
BsiHKAI GWGCWC 6 cut(s) 203, 339, 1011, 1448, 1755, 2709
BsiHKCI CYCGRG 8 cut(s) 293, 338, 473, 1139, 1601, 2393, 2453, 2955
BslFI GGGAC 8 cut(s) 439, 647, 1299, 1450, 1477, 2308, 2735, 3038
BsmAI GTCTC 8 cut(s) 310, 624, 872, 971, 1293, 1611, 2390, 3144
BsmBI CGTCTC 2 cut(s) 310, 2390
BsmFI GGGAC 8 cut(s) 439, 647, 1299, 1450, 1477, 2308, 2735, 3038
BsmI GAATGC 3 cut(s) 1875, 2439, 2949
Bso31I GGTCTC 4 cut(s) 624, 1293, 1611, 3144
BsoBI CYCGRG 8 cut(s) 293, 338, 473, 1139, 1601, 2393, 2453, 2955
Bsp120I GGGCCC 2 cut(s) 1853, 3000
Bsp13I TCCGGA 1 cut(s) 3183
Bsp1407I TGTACA 1 cut(s) 2292
Bsp143I GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
Bsp1720I GCTNAGC 3 cut(s) 1596, 1953, 2463
Bsp68I TCGCGA 1 cut(s) 1236
BspCNI CTCAG 9 cut(s) 133, 442, 531, 895, 1503, 1609, 1621, 2476, 2854
BspEI TCCGGA 1 cut(s) 3183
BspHI TCATGA 1 cut(s) 694
BspMI ACCTGC 1 cut(s) 3138
BspPI GGATC 7 cut(s) 590, 603, 1352, 1708, 1739, 1752, 2624
BspQI GCTCTTC 2 cut(s) 476, 2588
BspT107I GGYRCC 2 cut(s) 553, 2733
BspTNI GGTCTC 4 cut(s) 624, 1293, 1611, 3144
BsrBI CCGCTC 2 cut(s) 292, 2998
BsrDI GCAATG 2 cut(s) 1545, 2420
BsrFI RCCGGY 7 cut(s) 715, 1134, 1291, 1969, 2796, 3163, 3207
BsrGI TGTACA 1 cut(s) 2292
BsrI ACTGG 4 cut(s) 1489, 1667, 1748, 2204
BssAI RCCGGY 7 cut(s) 715, 1134, 1291, 1969, 2796, 3163, 3207
BssHII GCGCGC 2 cut(s) 2004, 2006
BssMI GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
BssNI GRCGYC 2 cut(s) 554, 2217
BssSI CACGAG 2 cut(s) 1109, 1721
BssT1I CCWWGG 1 cut(s) 1479
Bst2BI CACGAG 2 cut(s) 1109, 1721
Bst2UI CCWGG 6 cut(s) 194, 666, 1172, 1319, 2990, 3005
Bst6I CTCTTC 2 cut(s) 476, 2588
BstACI GRCGYC 2 cut(s) 554, 2217
BstAPI GCANNNNNTGC 1 cut(s) 2422
BstAUI TGTACA 1 cut(s) 2292
BstBAI YACGTR 8 cut(s) 214, 1813, 1906, 1927, 2148, 2580, 2710, 3032
BstDSI CCRYGG 3 cut(s) 1054, 1947, 2052
BstEII GGTNACC 1 cut(s) 724
BstF5I GGATG 7 cut(s) 739, 766, 802, 832, 997, 2668, 2869
BstH2I RGCGCY 4 cut(s) 210, 367, 557, 1810
BstKTI GATC 9 cut(s) 138, 345, 598, 900, 1227, 1360, 1716, 1747, 2619
BstMAI GTCTC 8 cut(s) 310, 624, 872, 971, 1293, 1611, 2390, 3144
BstMBI GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
BstMCI CGRYCG 2 cut(s) 409, 900
BstNI CCWGG 6 cut(s) 194, 666, 1172, 1319, 2990, 3005
BstNSI RCATGY 2 cut(s) 2209, 2560
BstPI GGTNACC 1 cut(s) 724
BstSFI CTRYAG 1 cut(s) 1974
BstSLI GKGCMC 3 cut(s) 1857, 2709, 3004
BstSNI TACGTA 1 cut(s) 1813
BstV2I GAAGAC 2 cut(s) 1168, 1710
BstX2I RGATCY 4 cut(s) 595, 1224, 1357, 1744
BstXI CCANNNNNNTGG 2 cut(s) 2497, 2659
BstYI RGATCY 4 cut(s) 595, 1224, 1357, 1744
BstZI CGGCCG 1 cut(s) 406
BsuI GTATCC 2 cut(s) 1387, 2842
BtgI CCRYGG 3 cut(s) 1054, 1947, 2052
BtrI CACGTC 3 cut(s) 1288, 1765, 2400
BtsCI GGATG 7 cut(s) 739, 766, 802, 832, 997, 2668, 2869
BtsI GCAGTG 1 cut(s) 1645
BtsIMutI CAGTG 4 cut(s) 1645, 1660, 1755, 3069
BtuMI TCGCGA 1 cut(s) 1236
BveI ACCTGC 1 cut(s) 3138
CciI TCATGA 1 cut(s) 694
Cfr10I RCCGGY 7 cut(s) 715, 1134, 1291, 1969, 2796, 3163, 3207
Cfr9I CCCGGG 2 cut(s) 1139, 2955
CpoI CGGWCCG 5 cut(s) 1294, 2103, 2328, 2365, 3205
CseI GACGC 6 cut(s) 173, 1433, 1460, 1806, 2066, 2573
CsiI ACCWGGT 1 cut(s) 1170
CspAI ACCGGT 2 cut(s) 2796, 3207
CspCI CAANNNNNGTGG 2 cut(s) 1036, 1071
CspI CGGWCCG 5 cut(s) 1294, 2103, 2328, 2365, 3205
CviAII CATG 8 cut(s) 322, 695, 1440, 1636, 2206, 2497, 2557, 2587
DinI GGCGCC 1 cut(s) 555
DpnI GATC 9 cut(s) 137, 344, 597, 899, 1226, 1359, 1715, 1746, 2618
DpnII GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
DraIII CACNNNGTG 1 cut(s) 1111
DrdI GACNNNNNNGTC 1 cut(s) 1292
DriI GACNNNNNGTC 1 cut(s) 1243
DseDI GACNNNNNNGTC 1 cut(s) 1292
EaeI YGGCCR 7 cut(s) 190, 232, 249, 406, 1759, 2070, 2502
EagI CGGCCG 1 cut(s) 406
Eam1104I CTCTTC 2 cut(s) 476, 2588
Eam1105I GACNNNNNGTC 1 cut(s) 1243
EarI CTCTTC 2 cut(s) 476, 2588
Ecl136II GAGCTC 4 cut(s) 201, 337, 1009, 1446
EclXI CGGCCG 1 cut(s) 406
Eco105I TACGTA 1 cut(s) 1813
Eco130I CCWWGG 1 cut(s) 1479
Eco147I AGGCCT 2 cut(s) 928, 2806
Eco24I GRGCYC 9 cut(s) 203, 339, 519, 1011, 1079, 1448, 1857, 2926, 3004
Eco31I GGTCTC 4 cut(s) 624, 1293, 1611, 3144
Eco32I GATATC 1 cut(s) 1387
Eco47III AGCGCT 3 cut(s) 208, 365, 1808
Eco52I CGGCCG 1 cut(s) 406
Eco53kI GAGCTC 4 cut(s) 201, 337, 1009, 1446
Eco57I CTGAAG 1 cut(s) 1455
Eco72I CACGTG 6 cut(s) 1906, 1927, 2148, 2580, 2710, 3032
Eco88I CYCGRG 8 cut(s) 293, 338, 473, 1139, 1601, 2393, 2453, 2955
Eco91I GGTNACC 1 cut(s) 724
EcoICRI GAGCTC 4 cut(s) 201, 337, 1009, 1446
EcoO109I RGGNCCY 9 cut(s) 265, 349, 661, 1537, 1672, 1854, 2097, 3007, 3025
EcoO65I GGTNACC 1 cut(s) 724
EcoRI GAATTC 1 cut(s) 915
EcoRII CCWGG 6 cut(s) 192, 664, 1170, 1317, 2988, 3003
EcoRV GATATC 1 cut(s) 1387
EcoT14I CCWWGG 1 cut(s) 1479
EcoT22I ATGCAT 1 cut(s) 1875
EcoT38I GRGCYC 9 cut(s) 203, 339, 519, 1011, 1079, 1448, 1857, 2926, 3004
EgeI GGCGCC 1 cut(s) 555
EheI GGCGCC 1 cut(s) 555
ErhI CCWWGG 1 cut(s) 1479
Esp3I CGTCTC 2 cut(s) 310, 2390
FaeI CATG 8 cut(s) 325, 698, 1443, 1639, 2209, 2500, 2560, 2590
FalI AAGNNNNNCTT 2 cut(s) 383, 415
FaqI GGGAC 8 cut(s) 439, 647, 1299, 1450, 1477, 2308, 2735, 3038
FatI CATG 8 cut(s) 321, 694, 1439, 1635, 2205, 2496, 2556, 2586
FauI CCCGC 5 cut(s) 1622, 1844, 2133, 2474, 2991
FauNDI CATATG 1 cut(s) 756
FblI GTMKAC 2 cut(s) 936, 2856
FokI GGATG 7 cut(s) 726, 753, 789, 819, 984, 2675, 2876
FriOI GRGCYC 9 cut(s) 203, 339, 519, 1011, 1079, 1448, 1857, 2926, 3004
FspBI CTAG 3 cut(s) 960, 1340, 2895
GsaI CCCAGC 6 cut(s) 40, 73, 79, 85, 1994, 2537
GsuI CTGGAG 7 cut(s) 187, 611, 687, 1560, 2297, 2892, 3040
HaeII RGCGCY 4 cut(s) 210, 367, 557, 1810
HgaI GACGC 6 cut(s) 173, 1433, 1460, 1806, 2066, 2573
Hin1I GRCGYC 2 cut(s) 554, 2217
Hin1II CATG 8 cut(s) 325, 698, 1443, 1639, 2209, 2500, 2560, 2590
HincII GTYRAC 3 cut(s) 937, 1569, 2857
HindII GTYRAC 3 cut(s) 937, 1569, 2857
HpaI GTTAAC 1 cut(s) 1569
HpyAV CCTTC 5 cut(s) 638, 692, 1337, 1832, 2020
Hsp92I GRCGYC 2 cut(s) 554, 2217
Hsp92II CATG 8 cut(s) 325, 698, 1443, 1639, 2209, 2500, 2560, 2590
KasI GGCGCC 1 cut(s) 553
KflI GGGWCCC 1 cut(s) 3025
Kpn2I TCCGGA 1 cut(s) 3183
KpnI GGTACC 1 cut(s) 2737
KroI GCCGGC 1 cut(s) 1969
KroNI GCCGGC 1 cut(s) 1971
KspAI GTTAAC 1 cut(s) 1569
Kzo9I GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
LguI GCTCTTC 2 cut(s) 476, 2588
LweI GCATC 4 cut(s) 1559, 1882, 1989, 2274
MabI ACCWGGT 1 cut(s) 1170
MaeI CTAG 3 cut(s) 960, 1340, 2895
MaeIII GTNAC 4 cut(s) 724, 2107, 2218, 2689
MalI GATC 9 cut(s) 137, 344, 597, 899, 1226, 1359, 1715, 1746, 2618
MauBI CGCGCGCG 1 cut(s) 2006
MbiI CCGCTC 2 cut(s) 292, 2998
MboI GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
MboII GAAGA 7 cut(s) 490, 493, 883, 1168, 1672, 1715, 2605
MflI RGATCY 4 cut(s) 595, 1224, 1357, 1744
MlsI TGGCCA 2 cut(s) 192, 2072
MluCI AATT 5 cut(s) 522, 915, 1253, 1770, 2605
MluI ACGCGT 1 cut(s) 1425
MluNI TGGCCA 2 cut(s) 192, 2072
Mly113I GGCGCC 1 cut(s) 554
MmeI TCCRAC 9 cut(s) 333, 476, 840, 1227, 1308, 1473, 2541, 2640, 3183
Mox20I TGGCCA 2 cut(s) 192, 2072
Mph1103I ATGCAT 1 cut(s) 1875
MroI TCCGGA 1 cut(s) 3183
MroNI GCCGGC 1 cut(s) 1969
MroXI GAANNNNTTC 1 cut(s) 398
MscI TGGCCA 2 cut(s) 192, 2072
MseI TTAA 5 cut(s) 171, 1568, 2336, 2939, 3212
MslI CAYNNNNRTG 5 cut(s) 1002, 1665, 1682, 2495, 3074
Msp20I TGGCCA 2 cut(s) 192, 2072
MspA1I CMGCKG 8 cut(s) 238, 378, 589, 1834, 1845, 1960, 2533, 2819
Mva1269I GAATGC 3 cut(s) 1875, 2439, 2949
MvaI CCWGG 6 cut(s) 194, 666, 1172, 1319, 2990, 3005
NaeI GCCGGC 1 cut(s) 1971
NarI GGCGCC 1 cut(s) 554
NdeI CATATG 1 cut(s) 756
NdeII GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
NgoMIV GCCGGC 1 cut(s) 1969
NlaIII CATG 8 cut(s) 325, 698, 1443, 1639, 2209, 2500, 2560, 2590
NmeAIII GCCGAG 4 cut(s) 384, 639, 1737, 1980
NmuCI GTSAC 3 cut(s) 724, 2218, 2689
NruI TCGCGA 1 cut(s) 1236
NsiI ATGCAT 1 cut(s) 1875
NspI RCATGY 2 cut(s) 2209, 2560
OliI CACNNNNGTG 1 cut(s) 3074
PaeI GCATGC 1 cut(s) 2209
PaeR7I CTCGAG 3 cut(s) 293, 338, 473
PagI TCATGA 1 cut(s) 694
PasI CCCWGGG 1 cut(s) 2989
PauI GCGCGC 2 cut(s) 2004, 2006
PceI AGGCCT 2 cut(s) 928, 2806
PciI ACATGT 1 cut(s) 2556
PciSI GCTCTTC 2 cut(s) 476, 2588
PctI GAATGC 3 cut(s) 1875, 2439, 2949
PdiI GCCGGC 1 cut(s) 1971
PdmI GAANNNNTTC 1 cut(s) 398
PfeI GAWTC 8 cut(s) 499, 955, 994, 1041, 1555, 1797, 1996, 2917
PfoI TCCNGGA 1 cut(s) 2324
PinAI ACCGGT 2 cut(s) 2796, 3207
Ple19I CGATCG 1 cut(s) 900
PluTI GGCGCC 1 cut(s) 557
PmaCI CACGTG 6 cut(s) 1906, 1927, 2148, 2580, 2710, 3032
PmlI CACGTG 6 cut(s) 1906, 1927, 2148, 2580, 2710, 3032
Ppu21I YACGTR 8 cut(s) 214, 1813, 1906, 1927, 2148, 2580, 2710, 3032
PpuMI RGGWCCY 7 cut(s) 265, 349, 661, 1537, 1672, 2097, 3025
PscI ACATGT 1 cut(s) 2556
Psp124BI GAGCTC 4 cut(s) 203, 339, 1011, 1448
Psp5II RGGWCCY 7 cut(s) 265, 349, 661, 1537, 1672, 2097, 3025
Psp6I CCWGG 6 cut(s) 192, 664, 1170, 1317, 2988, 3003
PspCI CACGTG 6 cut(s) 1906, 1927, 2148, 2580, 2710, 3032
PspEI GGTNACC 1 cut(s) 724
PspFI CCCAGC 6 cut(s) 36, 69, 75, 81, 1990, 2533
PspGI CCWGG 6 cut(s) 192, 664, 1170, 1317, 2988, 3003
PspOMI GGGCCC 2 cut(s) 1853, 3000
PspPPI RGGWCCY 7 cut(s) 265, 349, 661, 1537, 1672, 2097, 3025
PspXI VCTCGAGB 1 cut(s) 293
PsrI GAACNNNNNNTAC 4 cut(s) 2126, 2158, 2783, 2815
PsuI RGATCY 4 cut(s) 595, 1224, 1357, 1744
PteI GCGCGC 2 cut(s) 2004, 2006
PvuI CGATCG 1 cut(s) 900
PvuII CAGCTG 2 cut(s) 1960, 2819
RruI TCGCGA 1 cut(s) 1236
RseI CAYNNNNRTG 5 cut(s) 1002, 1665, 1682, 2495, 3074
Rsr2I CGGWCCG 5 cut(s) 1294, 2103, 2328, 2365, 3205
RsrII CGGWCCG 5 cut(s) 1294, 2103, 2328, 2365, 3205
SacI GAGCTC 4 cut(s) 203, 339, 1011, 1448
SalI GTCGAC 2 cut(s) 935, 2855
SapI GCTCTTC 2 cut(s) 476, 2588
SaqAI TTAA 5 cut(s) 171, 1568, 2336, 2939, 3212
Sau3AI GATC 9 cut(s) 135, 342, 595, 897, 1224, 1357, 1713, 1744, 2616
ScaI AGTACT 1 cut(s) 1028
SexAI ACCWGGT 1 cut(s) 1170
SfaNI GCATC 4 cut(s) 1559, 1882, 1989, 2274
SfcI CTRYAG 1 cut(s) 1974
SfoI GGCGCC 1 cut(s) 555
Sfr274I CTCGAG 3 cut(s) 293, 338, 473
SgrAI CRCCGGYG 1 cut(s) 3163
SlaI CTCGAG 3 cut(s) 293, 338, 473
SmaI CCCGGG 2 cut(s) 1141, 2957
SmiMI CAYNNNNRTG 5 cut(s) 1002, 1665, 1682, 2495, 3074
SmlI CTYRAG 3 cut(s) 293, 338, 473
SmoI CTYRAG 3 cut(s) 293, 338, 473
SnaBI TACGTA 1 cut(s) 1813
SphI GCATGC 1 cut(s) 2209
Sse9I AATT 5 cut(s) 522, 915, 1253, 1770, 2605
SseBI AGGCCT 2 cut(s) 928, 2806
SspDI GGCGCC 1 cut(s) 553
SspMI CTAG 3 cut(s) 960, 1340, 2895
SstI GAGCTC 4 cut(s) 203, 339, 1011, 1448
StuI AGGCCT 2 cut(s) 928, 2806
StyI CCWWGG 1 cut(s) 1479
TaqII GACCGA 1 cut(s) 2949
TasI AATT 5 cut(s) 522, 915, 1253, 1770, 2605
TatI WGTACW 3 cut(s) 1026, 2142, 2292
TfiI GAWTC 8 cut(s) 499, 955, 994, 1041, 1555, 1797, 1996, 2917
Tru1I TTAA 5 cut(s) 171, 1568, 2336, 2939, 3212
Tru9I TTAA 5 cut(s) 171, 1568, 2336, 2939, 3212
TscAI CASTG 4 cut(s) 1652, 1667, 1755, 3076
TseFI GTSAC 3 cut(s) 724, 2218, 2689
Tsp45I GTSAC 3 cut(s) 724, 2218, 2689
TspGWI ACGGA 8 cut(s) 1082, 1166, 1219, 1554, 2069, 2126, 2231, 2686
TspMI CCCGGG 2 cut(s) 1139, 2955
TspRI CASTG 4 cut(s) 1652, 1667, 1755, 3076
VneI GTGCAC 1 cut(s) 2705
XapI RAATTY 2 cut(s) 522, 915
XceI RCATGY 2 cut(s) 2209, 2560
XcmI CCANNNNNNNNNTGG 2 cut(s) 211, 2497
XhoI CTCGAG 3 cut(s) 293, 338, 473
XmaI CCCGGG 2 cut(s) 1139, 2955
XmiI GTMKAC 2 cut(s) 936, 2856
XmnI GAANNNNTTC 1 cut(s) 398
XspI CTAG 3 cut(s) 960, 1340, 2895
ZraI GACGTC 1 cut(s) 2218
ZrmI AGTACT 1 cut(s) 1028
Zsp2I ATGCAT 1 cut(s) 1875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.