Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0015951

Physical Location & Seq

Genomic Coordinates Reverse (-)

2412746 .. 2416103

Gene Structure 3358 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G002940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3177 bp

ATGACCGGAACGGTGTCGTTTCAGCAAACCCCACCCCAGCACTCCCACTCCCAACCCCAACCACAGCCACAGCCACAGCCACAGCCACAACCAGAACCACCGCAACCGCAACAGCCACCTCAGCCGCAGAGGGCGATCAGGAAGCTCGTCGTGGAAGTGGTGGACGCACTTAACCTTTTACCTAAAGATGGCCAGGGGAGCTCCAGCGCTTACGTGGTGGCGGACTTCGACGGCCAGCGGAAGCGGACGGCCACCAAATACAAGGACCTCAACCCCGTCTGGAACGAGCCGCTCGAGTTCGTCGTCTCCGACCCTGACAACATGGACTACGAGGAGCTCGAGATCGAGGTCCTCAACGACAAGCGCTACGGCAACAGCGGCACGGCGCGTAAGAACCACTTCCTCGGCCGGGTGAAGCTCTACGGGACTCAGTTCGCCAAGCGCGGCGACGAGGGTTTGGTGTATTTCCAGCTCGAGAAGAAGAGCGTGTTCAGTTGGATTCGAGGAGAAATCGGGCTCAGAATTTATTACTACGACGAGTTAGTGGACGAGGCGCCGCCGCAGCAGCAGCAGCAGCAACAACCGCCGCTGGAGGATCCGCCGCCGGAGAGGCCGAGGTCTCCGGCGGTTGTGGTGGTCGAGGAAGGGAGGGTGTTTGAGGTCCCTGGAGGACACGTTCAGACTACTACATTTCATGAAGGCTCGTACTCGCCTCCGGTTGTGGTCACCGAGCAATCGCATCCGCAGATGGTTCATATGCACGGTCATCCTCCGCCGGGTCAGGAAATGCACGGTCAAGGACATCCGCCGCCCGGTCAGGAAATGCACGGTCATCCGCCGCCGGAGGTTCATTTTCAGTCGGAGGTGAGGAAGATGGAGACTCAGAGGGTTGCTCCGATCGGTGAGAGAGTGAGAATTCCGAGGAGGCCTAACGTCGACTTCTCTCCGAAAGTGATTCCTAGAAAGTTCGCGGCGGAGACAACGGCGGAGAGGATTCATCCCTGTGAGCTCGTCGAGCCTATGCAGTACTTGTTCATCAGAATCGTCAAGGCCCGTGGACTCGCGCCGAACGAGAGCCCCTACGTCAAGGTCCGTACAAATAGCCACCTCGTGAAGTCGAAAATGGCGGTTCACCGGCCCGGGGAGCCGACGGACTCGCCGGAGTGGAACCAGGTCTTCGCACTCGCTCACAACCGCCCTGACTCGGTGAGTTCCACATTGGAGATCTCCGTTCGCGACTCGCCGTCGGAGCAATTCTTAGGCGGCGTGTGCTTCGACCTCTCCGACGTGCCGGTCCGAGACCCACCGGACAGTCCCCTGGCTCCACAATGGTACAGACTAGAAGGAGGAGCCGGAGATCCAAACTCCGGTAAAGTATCCGGCGACATCCAGCTCTCTGTTTGGATAGGAACACAAGCCGATGACGCGTTCCCTGAAGCATGGAGCTCCGACGCACCGTACCTGTCCCACACGCGCTCCAAGGTGTACCAGTCCCCGAAGCTCTGGTATCTGAGAATGACGGTTATGGAGGTTCAGGACCTCCACATTGCATCGAATCTACCTCCGTTAACGGCTCCAGAAATCCGAGTCAAAGCTCAGCTCGGGTCTCAGTCGGCTCGAACCCGGCGCGGGTCCATGAACAACCACTGCGCCTCGTTTCACTGGAATGAGGACCTCATCTTCGTGGCGAGTGAGCCTCTCGAAGACTCGCTGATCCTGCTCGTGGAGGACCGCACCAACAAGGATCCAGTGCTCCTCGGCCACGTCGTAATTCTGGTGAACTCCATCGAGCAGAGAATCGACGAGCGCTACGTGGCGTCGAAATGGTTGCCGCTGGAAGGCAGCGGAGGCGGGCCCTACTGCGGCAGAATGCATCTCCGCCTTTGCTTGGAGGGTGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTTCGGCCCACGGCTAAGCAGCTGTGGAAGCCGGCTGTAGGCATCTTGGAGCTGGGGATTCTCGGCGCGCGCGGCTTGCTTCCGATGAAAGCTAAATCCGGTGGGAAAGGCTCCACGGACGCTTACTGTGTGGCCAAGTATGGTAAAAAATGGGTCAGGACCCGGACCGTTACGGATAGCTTCGACCCGCGCTGGAACGAACAGTACACGTGGCAAGTATATGACCCCTGCACCGTCCTCACCGTTGAAAAGCAGGATTTCCGTATAGGGAAAATACGAATACGCATCTCCACGCTGGAGAGCAACAGGGTGTACAAGAACTCCTACCCGTTGCTGGTTTTGTCCCGGACCGGGTTAAAGAAAATGGGCGAGATAGAGCTGGCGGTCCGGTTCGCCTGCCCGTCCTTGCTACCCGAGACCTGCGCGGTTTACGGGCAGCCATTGCTGCCCAGAATGCACTACCTCCGCCCTCTCGGGGTGGCTCAGCAGGAGGCTTTACGCGGGGCAGCCACACGCATGGTGGCCGCGTGGCTCGCACGCTCCGAACCGCCGCTGGGGCCGGAGGTGGTGCGGTACATGTTGGACGCGGACTCGCACACGTGGAGCATGAGGAAGAGCAAAGCGAATTGGTTTCGGATCGTGGCGGTGCTGGCGTGGTTGGTCGGGTTAGCCAAGTGGTTGGATGATATACGGAGGTGGAGGAACCCGGTGACGACAGTTTTGGTGCACGTGTTGTATTTGGTTCTGGTTTGGTACCCGGATTTGATAGTCCCAACCGGGTTTCTATATGTGTTTCTGATTGGGGTTTGGTACTACCGGTTCAGGCCTAAGATACCAGCTGGAATGGACCTCCGGCTCTCTCAGGCGGATACAGTCGACCCGGATGAACTTGATGAGGAGTTCGATACTTTTCCTAGCTCAAAATCTCCGGATGTGATTCGAGCCCGGTATGACCGATTAAGAATGCTGGCGGCCCGGGTCCAAACGGTTTTGGGCGACTTTGCGGCCCAAGGAGAGCGGGCCCAGGCCCTTGTGAGCTGGAGGGACCCACGTGCTACAAAGTTGTTCATAGGAGTATGCTTGCTTATCACTGTAGTGCTGTATGCTGTGCCACCCAAAATGGTTGCGGTGGCATTGGGTTTTTACTACCTGCGCCACCCGATGTTCAGAGACCCAATGCCACCGGCGAGCCTCAACTTTTTCCGGAGGCTTCCGAGTCTGTCGGACCGGTTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009506 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0030054 GO:0031224 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1058

Amino Acids

119.6

Weight (kDa)

8.27

Isoelectric Point (pI)

53.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	48 - 141	6.4e-17	C2 domain
C2	PF00168	343 - 447	2.5e-08	C2 domain
C2	PF00168	502 - 612	5.5e-06	C2 domain
C2	PF00168	660 - 757	1.5e-14	C2 domain
PRT_C	PF08372	903 - 1058	5.7e-72	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74720
fragaria_vesca	FvH4_5g15460
malus_domestica	MD06G1188400.v1.1
prunus_persica	Prupe.5G186600_v2.0.a1
pyrus_communis	pycom06g16700
rosa_chinensis	RchiOBHm_Chr7g0180621
rosa_laevigata	RLG00000005249
rosa_multiflora	Rmu_co8415707.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272730
rosa_rugosa	Rorug06G0434600
rosa_samantha	Rh7AG035700 Rh7BG035600 Rh7CG037300 Rh7DG035900
rosa_wichuraiana	Rw7G002940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1292
Acc36I	ACCTGC	2 cut(s)	2366, 3096
Acc65I	GGTACC	1 cut(s)	2691
AccB1I	GGYRCC	2 cut(s)	553, 2691
AccBSI	CCGCTC	2 cut(s)	292, 2956
AccI	GTMKAC	2 cut(s)	936, 2814
AccIII	TCCGGA	2 cut(s)	2866, 3141
AclWI	GGATC	7 cut(s)	590, 603, 1352, 1708, 1739, 1752, 2582
AcoI	YGGCCR	7 cut(s)	190, 232, 249, 406, 1759, 2070, 2460
AcsI	RAATTY	2 cut(s)	522, 915
AcuI	CTGAAG	1 cut(s)	1455
AcvI	CACGTG	6 cut(s)	1906, 1927, 2148, 2538, 2668, 2990
AcyI	GRCGYC	2 cut(s)	554, 1817
AdeI	CACNNNGTG	1 cut(s)	1111
AfeI	AGCGCT	3 cut(s)	208, 365, 1808
AflIII	ACRYGT	7 cut(s)	673, 1425, 1926, 2145, 2514, 2535, 2667
AgeI	ACCGGT	2 cut(s)	2754, 3165
AgsI	TTSAA	1 cut(s)	2186
AhdI	GACNNNNNGTC	1 cut(s)	1243
AjiI	CACGTC	2 cut(s)	1288, 1765
AjnI	CCWGG	5 cut(s)	192, 664, 1170, 1317, 2961
AleI	CACNNNNGTG	1 cut(s)	3032
AloI	GAACNNNNNNTCC	2 cut(s)	660, 692
Alw21I	GWGCWC	6 cut(s)	203, 339, 1011, 1448, 1755, 2667
Alw26I	GTCTC	8 cut(s)	310, 624, 872, 971, 1293, 1611, 2348, 3102
Alw44I	GTGCAC	1 cut(s)	2663
AlwI	GGATC	7 cut(s)	590, 603, 1352, 1708, 1739, 1752, 2582
Ama87I	CYCGRG	8 cut(s)	293, 338, 473, 1139, 1601, 2351, 2411, 2913
Aor13HI	TCCGGA	2 cut(s)	2866, 3141
Aor51HI	AGCGCT	3 cut(s)	208, 365, 1808
ApaI	GGGCCC	2 cut(s)	1857, 2962
ApaLI	GTGCAC	1 cut(s)	2663
ApoI	RAATTY	2 cut(s)	522, 915
ArsI	GACNNNNNNTTYG	4 cut(s)	1664, 1696, 2641, 2673
AsiGI	ACCGGT	2 cut(s)	2754, 3165
Asp700I	GAANNNNTTC	1 cut(s)	398
Asp718I	GGTACC	1 cut(s)	2691
AsuHPI	GGTGA	9 cut(s)	424, 718, 877, 914, 1124, 1219, 1789, 2170, 2659
AvaI	CYCGRG	8 cut(s)	293, 338, 473, 1139, 1601, 2351, 2411, 2913
BaeGI	GKGCMC	3 cut(s)	1857, 2667, 2962
BalI	TGGCCA	2 cut(s)	192, 2072
BamHI	GGATCC	2 cut(s)	595, 1744
BanI	GGYRCC	2 cut(s)	553, 2691
BanII	GRGCYC	9 cut(s)	203, 339, 519, 1011, 1079, 1448, 1857, 2884, 2962
BauI	CACGAG	2 cut(s)	1109, 1721
BbrPI	CACGTG	6 cut(s)	1906, 1927, 2148, 2538, 2668, 2990
BbsI	GAAGAC	2 cut(s)	1168, 1710
Bbv12I	GWGCWC	6 cut(s)	203, 339, 1011, 1448, 1755, 2667
BbvCI	CCTCAGC	1 cut(s)	120
BccI	CCATC	4 cut(s)	182, 742, 868, 1793
BceAI	ACGGC	8 cut(s)	247, 264, 385, 399, 999, 1228, 1587, 1965
BcgI	CGANNNNNNTGC	2 cut(s)	1810, 1844
BciT130I	CCWGG	5 cut(s)	194, 666, 1172, 1319, 2963
BciVI	GTATCC	2 cut(s)	1387, 2800
BcoDI	GTCTC	8 cut(s)	310, 624, 872, 971, 1293, 1611, 2348, 3102
BfaI	CTAG	3 cut(s)	960, 1340, 2853
BfmI	CTRYAG	2 cut(s)	1974, 3030
BfoI	RGCGCY	4 cut(s)	210, 367, 557, 1810
BfuAI	ACCTGC	2 cut(s)	2366, 3096
BfuI	GTATCC	2 cut(s)	1387, 2800
BglI	GCCNNNNNGGC	2 cut(s)	610, 2494
BglII	AGATCT	1 cut(s)	1224
BlpI	GCTNAGC	3 cut(s)	1596, 1953, 2421
BmcAI	AGTACT	1 cut(s)	1028
BmeRI	GACNNNNNGTC	1 cut(s)	1243
BmeT110I	CYCGRG	8 cut(s)	293, 338, 473, 1139, 1601, 2351, 2411, 2913
BmgBI	CACGTC	2 cut(s)	1288, 1765
BmsI	GCATC	5 cut(s)	748, 1559, 1882, 1989, 2232
BpiI	GAAGAC	2 cut(s)	1168, 1710
BplI	GAGNNNNNCTC	4 cut(s)	877, 909, 1681, 1713
BpmI	CTGGAG	6 cut(s)	187, 611, 687, 1560, 2255, 2998
Bpu10I	CCTNAGC	1 cut(s)	120
Bpu1102I	GCTNAGC	3 cut(s)	1596, 1953, 2421
BsaAI	YACGTR	8 cut(s)	214, 1813, 1906, 1927, 2148, 2538, 2668, 2990
BsaHI	GRCGYC	2 cut(s)	554, 1817
BsaI	GGTCTC	5 cut(s)	624, 1293, 1611, 2348, 3102
Bse118I	RCCGGY	6 cut(s)	1134, 1291, 1969, 2754, 3121, 3165
Bse1I	ACTGG	3 cut(s)	1489, 1667, 1748
Bse3DI	GCAATG	2 cut(s)	1545, 2378
BseAI	TCCGGA	2 cut(s)	2866, 3141
BseBI	CCWGG	5 cut(s)	194, 666, 1172, 1319, 2963
BseGI	GGATG	9 cut(s)	739, 766, 802, 832, 997, 1386, 2626, 2827, 2875
BseMI	GCAATG	2 cut(s)	1545, 2378
BseMII	CTCAG	9 cut(s)	134, 443, 532, 896, 1502, 1610, 1622, 2435, 2813
BseNI	ACTGG	3 cut(s)	1489, 1667, 1748
BsePI	GCGCGC	2 cut(s)	2004, 2006
BseRI	GAGGAG	6 cut(s)	347, 519, 937, 1362, 1745, 2849
BseSI	GKGCMC	3 cut(s)	1857, 2667, 2962
BseX3I	CGGCCG	1 cut(s)	406
BseYI	CCCAGC	3 cut(s)	36, 1990, 2491
BsgI	GTGCAG	2 cut(s)	1951, 2152
Bsh1285I	CGRYCG	2 cut(s)	409, 900
BshNI	GGYRCC	2 cut(s)	553, 2691
BshTI	ACCGGT	2 cut(s)	2754, 3165
BsiEI	CGRYCG	2 cut(s)	409, 900
BsiHKAI	GWGCWC	6 cut(s)	203, 339, 1011, 1448, 1755, 2667
BsiHKCI	CYCGRG	8 cut(s)	293, 338, 473, 1139, 1601, 2351, 2411, 2913
BslFI	GGGAC	8 cut(s)	439, 647, 1299, 1450, 1477, 2266, 2693, 2996
BsmAI	GTCTC	8 cut(s)	310, 624, 872, 971, 1293, 1611, 2348, 3102
BsmBI	CGTCTC	1 cut(s)	310
BsmFI	GGGAC	8 cut(s)	439, 647, 1299, 1450, 1477, 2266, 2693, 2996
BsmI	GAATGC	3 cut(s)	1875, 2397, 2907
Bso31I	GGTCTC	5 cut(s)	624, 1293, 1611, 2348, 3102
BsoBI	CYCGRG	8 cut(s)	293, 338, 473, 1139, 1601, 2351, 2411, 2913
Bsp120I	GGGCCC	2 cut(s)	1853, 2958
Bsp13I	TCCGGA	2 cut(s)	2866, 3141
Bsp1407I	TGTACA	1 cut(s)	2250
Bsp143I	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
Bsp1720I	GCTNAGC	3 cut(s)	1596, 1953, 2421
Bsp68I	TCGCGA	1 cut(s)	1236
BspCNI	CTCAG	9 cut(s)	133, 442, 531, 895, 1503, 1609, 1621, 2434, 2812
BspEI	TCCGGA	2 cut(s)	2866, 3141
BspHI	TCATGA	1 cut(s)	694
BspMI	ACCTGC	2 cut(s)	2366, 3096
BspPI	GGATC	7 cut(s)	590, 603, 1352, 1708, 1739, 1752, 2582
BspQI	GCTCTTC	2 cut(s)	476, 2546
BspT107I	GGYRCC	2 cut(s)	553, 2691
BspTNI	GGTCTC	5 cut(s)	624, 1293, 1611, 2348, 3102
BsrBI	CCGCTC	2 cut(s)	292, 2956
BsrDI	GCAATG	2 cut(s)	1545, 2378
BsrFI	RCCGGY	6 cut(s)	1134, 1291, 1969, 2754, 3121, 3165
BsrGI	TGTACA	1 cut(s)	2250
BsrI	ACTGG	3 cut(s)	1489, 1667, 1748
BssAI	RCCGGY	6 cut(s)	1134, 1291, 1969, 2754, 3121, 3165
BssHII	GCGCGC	2 cut(s)	2004, 2006
BssMI	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
BssNI	GRCGYC	2 cut(s)	554, 1817
BssSI	CACGAG	2 cut(s)	1109, 1721
BssT1I	CCWWGG	2 cut(s)	1479, 2947
Bst2BI	CACGAG	2 cut(s)	1109, 1721
Bst2UI	CCWGG	5 cut(s)	194, 666, 1172, 1319, 2963
Bst6I	CTCTTC	2 cut(s)	476, 2546
BstACI	GRCGYC	2 cut(s)	554, 1817
BstAPI	GCANNNNNTGC	1 cut(s)	2380
BstAUI	TGTACA	1 cut(s)	2250
BstBAI	YACGTR	8 cut(s)	214, 1813, 1906, 1927, 2148, 2538, 2668, 2990
BstDSI	CCRYGG	3 cut(s)	1054, 1947, 2052
BstEII	GGTNACC	1 cut(s)	724
BstF5I	GGATG	9 cut(s)	739, 766, 802, 832, 997, 1386, 2626, 2827, 2875
BstH2I	RGCGCY	4 cut(s)	210, 367, 557, 1810
BstKTI	GATC	9 cut(s)	138, 345, 598, 900, 1227, 1360, 1716, 1747, 2577
BstMAI	GTCTC	8 cut(s)	310, 624, 872, 971, 1293, 1611, 2348, 3102
BstMBI	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
BstMCI	CGRYCG	2 cut(s)	409, 900
BstNI	CCWGG	5 cut(s)	194, 666, 1172, 1319, 2963
BstNSI	RCATGY	1 cut(s)	2518
BstPI	GGTNACC	1 cut(s)	724
BstSFI	CTRYAG	2 cut(s)	1974, 3030
BstSLI	GKGCMC	3 cut(s)	1857, 2667, 2962
BstV2I	GAAGAC	2 cut(s)	1168, 1710
BstX2I	RGATCY	4 cut(s)	595, 1224, 1357, 1744
BstXI	CCANNNNNNTGG	2 cut(s)	2455, 2617
BstYI	RGATCY	4 cut(s)	595, 1224, 1357, 1744
BstZI	CGGCCG	1 cut(s)	406
BsuI	GTATCC	2 cut(s)	1387, 2800
BtgI	CCRYGG	3 cut(s)	1054, 1947, 2052
BtrI	CACGTC	2 cut(s)	1288, 1765
BtsCI	GGATG	9 cut(s)	739, 766, 802, 832, 997, 1386, 2626, 2827, 2875
BtsI	GCAGTG	1 cut(s)	1645
BtsIMutI	CAGTG	4 cut(s)	1645, 1660, 1755, 3027
BtuMI	TCGCGA	1 cut(s)	1236
BveI	ACCTGC	2 cut(s)	2366, 3096
CciI	TCATGA	1 cut(s)	694
Cfr10I	RCCGGY	6 cut(s)	1134, 1291, 1969, 2754, 3121, 3165
Cfr9I	CCCGGG	2 cut(s)	1139, 2913
CpoI	CGGWCCG	5 cut(s)	1294, 2103, 2286, 2323, 3163
CseI	GACGC	6 cut(s)	173, 1433, 1460, 1806, 2066, 2531
CsiI	ACCWGGT	1 cut(s)	1170
CspAI	ACCGGT	2 cut(s)	2754, 3165
CspCI	CAANNNNNGTGG	2 cut(s)	1036, 1071
CspI	CGGWCCG	5 cut(s)	1294, 2103, 2286, 2323, 3163
CviAII	CATG	7 cut(s)	322, 695, 1440, 1636, 2455, 2515, 2545
DinI	GGCGCC	1 cut(s)	555
DpnI	GATC	9 cut(s)	137, 344, 597, 899, 1226, 1359, 1715, 1746, 2576
DpnII	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
DraIII	CACNNNGTG	1 cut(s)	1111
DrdI	GACNNNNNNGTC	1 cut(s)	1292
DriI	GACNNNNNGTC	1 cut(s)	1243
DseDI	GACNNNNNNGTC	1 cut(s)	1292
EaeI	YGGCCR	7 cut(s)	190, 232, 249, 406, 1759, 2070, 2460
EagI	CGGCCG	1 cut(s)	406
Eam1104I	CTCTTC	2 cut(s)	476, 2546
Eam1105I	GACNNNNNGTC	1 cut(s)	1243
EarI	CTCTTC	2 cut(s)	476, 2546
Ecl136II	GAGCTC	4 cut(s)	201, 337, 1009, 1446
EclXI	CGGCCG	1 cut(s)	406
Eco130I	CCWWGG	2 cut(s)	1479, 2947
Eco147I	AGGCCT	2 cut(s)	928, 2764
Eco24I	GRGCYC	9 cut(s)	203, 339, 519, 1011, 1079, 1448, 1857, 2884, 2962
Eco31I	GGTCTC	5 cut(s)	624, 1293, 1611, 2348, 3102
Eco47III	AGCGCT	3 cut(s)	208, 365, 1808
Eco52I	CGGCCG	1 cut(s)	406
Eco53kI	GAGCTC	4 cut(s)	201, 337, 1009, 1446
Eco57I	CTGAAG	1 cut(s)	1455
Eco72I	CACGTG	6 cut(s)	1906, 1927, 2148, 2538, 2668, 2990
Eco88I	CYCGRG	8 cut(s)	293, 338, 473, 1139, 1601, 2351, 2411, 2913
Eco91I	GGTNACC	1 cut(s)	724
EcoICRI	GAGCTC	4 cut(s)	201, 337, 1009, 1446
EcoO109I	RGGNCCY	9 cut(s)	265, 349, 661, 1537, 1672, 1854, 2097, 2965, 2983
EcoO65I	GGTNACC	1 cut(s)	724
EcoRI	GAATTC	1 cut(s)	915
EcoRII	CCWGG	5 cut(s)	192, 664, 1170, 1317, 2961
EcoT14I	CCWWGG	2 cut(s)	1479, 2947
EcoT22I	ATGCAT	1 cut(s)	1875
EcoT38I	GRGCYC	9 cut(s)	203, 339, 519, 1011, 1079, 1448, 1857, 2884, 2962
EgeI	GGCGCC	1 cut(s)	555
EheI	GGCGCC	1 cut(s)	555
ErhI	CCWWGG	2 cut(s)	1479, 2947
Esp3I	CGTCTC	1 cut(s)	310
FaeI	CATG	7 cut(s)	325, 698, 1443, 1639, 2458, 2518, 2548
FalI	AAGNNNNNCTT	2 cut(s)	383, 415
FaqI	GGGAC	8 cut(s)	439, 647, 1299, 1450, 1477, 2266, 2693, 2996
FatI	CATG	7 cut(s)	321, 694, 1439, 1635, 2454, 2514, 2544
FauI	CCCGC	5 cut(s)	1622, 1844, 2133, 2432, 2949
FauNDI	CATATG	1 cut(s)	756
FblI	GTMKAC	2 cut(s)	936, 2814
FokI	GGATG	9 cut(s)	726, 753, 789, 819, 984, 1373, 2633, 2834, 2882
FriOI	GRGCYC	9 cut(s)	203, 339, 519, 1011, 1079, 1448, 1857, 2884, 2962
FspBI	CTAG	3 cut(s)	960, 1340, 2853
GsaI	CCCAGC	3 cut(s)	40, 1994, 2495
GsuI	CTGGAG	6 cut(s)	187, 611, 687, 1560, 2255, 2998
HaeII	RGCGCY	4 cut(s)	210, 367, 557, 1810
HgaI	GACGC	6 cut(s)	173, 1433, 1460, 1806, 2066, 2531
Hin1I	GRCGYC	2 cut(s)	554, 1817
Hin1II	CATG	7 cut(s)	325, 698, 1443, 1639, 2458, 2518, 2548
HincII	GTYRAC	3 cut(s)	937, 1569, 2815
HindII	GTYRAC	3 cut(s)	937, 1569, 2815
HpaI	GTTAAC	1 cut(s)	1569
HphI	GGTGA	9 cut(s)	424, 718, 877, 914, 1124, 1219, 1789, 2170, 2659
HpyAV	CCTTC	4 cut(s)	638, 692, 1337, 1832
Hsp92I	GRCGYC	2 cut(s)	554, 1817
Hsp92II	CATG	7 cut(s)	325, 698, 1443, 1639, 2458, 2518, 2548
KasI	GGCGCC	1 cut(s)	553
KflI	GGGWCCC	1 cut(s)	2983
Kpn2I	TCCGGA	2 cut(s)	2866, 3141
KpnI	GGTACC	1 cut(s)	2695
KroI	GCCGGC	1 cut(s)	1969
KroNI	GCCGGC	1 cut(s)	1971
KspAI	GTTAAC	1 cut(s)	1569
Kzo9I	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
LguI	GCTCTTC	2 cut(s)	476, 2546
LweI	GCATC	5 cut(s)	748, 1559, 1882, 1989, 2232
MabI	ACCWGGT	1 cut(s)	1170
MaeI	CTAG	3 cut(s)	960, 1340, 2853
MaeIII	GTNAC	3 cut(s)	724, 2107, 2647
MalI	GATC	9 cut(s)	137, 344, 597, 899, 1226, 1359, 1715, 1746, 2576
MauBI	CGCGCGCG	1 cut(s)	2006
MbiI	CCGCTC	2 cut(s)	292, 2956
MboI	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
MboII	GAAGA	7 cut(s)	490, 493, 883, 1168, 1672, 1715, 2563
MflI	RGATCY	4 cut(s)	595, 1224, 1357, 1744
MlsI	TGGCCA	2 cut(s)	192, 2072
MluCI	AATT	5 cut(s)	522, 915, 1253, 1770, 2563
MluI	ACGCGT	1 cut(s)	1425
MluNI	TGGCCA	2 cut(s)	192, 2072
Mly113I	GGCGCC	1 cut(s)	554
MmeI	TCCRAC	9 cut(s)	333, 476, 840, 1227, 1308, 1473, 2499, 2598, 3141
Mox20I	TGGCCA	2 cut(s)	192, 2072
Mph1103I	ATGCAT	1 cut(s)	1875
MroI	TCCGGA	2 cut(s)	2866, 3141
MroNI	GCCGGC	1 cut(s)	1969
MroXI	GAANNNNTTC	1 cut(s)	398
MscI	TGGCCA	2 cut(s)	192, 2072
MseI	TTAA	5 cut(s)	171, 1568, 2294, 2897, 3170
MslI	CAYNNNNRTG	5 cut(s)	1002, 1665, 1682, 2453, 3032
Msp20I	TGGCCA	2 cut(s)	192, 2072
MspA1I	CMGCKG	8 cut(s)	238, 378, 589, 1834, 1845, 1960, 2491, 2777
Mva1269I	GAATGC	3 cut(s)	1875, 2397, 2907
MvaI	CCWGG	5 cut(s)	194, 666, 1172, 1319, 2963
NaeI	GCCGGC	1 cut(s)	1971
NarI	GGCGCC	1 cut(s)	554
NdeI	CATATG	1 cut(s)	756
NdeII	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
NgoMIV	GCCGGC	1 cut(s)	1969
NlaIII	CATG	7 cut(s)	325, 698, 1443, 1639, 2458, 2518, 2548
NmeAIII	GCCGAG	4 cut(s)	384, 639, 1737, 1980
NmuCI	GTSAC	2 cut(s)	724, 2647
NruI	TCGCGA	1 cut(s)	1236
NsiI	ATGCAT	1 cut(s)	1875
NspI	RCATGY	1 cut(s)	2518
OliI	CACNNNNGTG	1 cut(s)	3032
PaeR7I	CTCGAG	3 cut(s)	293, 338, 473
PagI	TCATGA	1 cut(s)	694
PauI	GCGCGC	2 cut(s)	2004, 2006
PceI	AGGCCT	2 cut(s)	928, 2764
PciI	ACATGT	1 cut(s)	2514
PciSI	GCTCTTC	2 cut(s)	476, 2546
PctI	GAATGC	3 cut(s)	1875, 2397, 2907
PdiI	GCCGGC	1 cut(s)	1971
PdmI	GAANNNNTTC	1 cut(s)	398
PfeI	GAWTC	8 cut(s)	499, 955, 994, 1041, 1555, 1797, 1996, 2875
PfoI	TCCNGGA	1 cut(s)	2282
PinAI	ACCGGT	2 cut(s)	2754, 3165
Ple19I	CGATCG	1 cut(s)	900
PluTI	GGCGCC	1 cut(s)	557
PmaCI	CACGTG	6 cut(s)	1906, 1927, 2148, 2538, 2668, 2990
PmlI	CACGTG	6 cut(s)	1906, 1927, 2148, 2538, 2668, 2990
Ppu21I	YACGTR	8 cut(s)	214, 1813, 1906, 1927, 2148, 2538, 2668, 2990
PpuMI	RGGWCCY	7 cut(s)	265, 349, 661, 1537, 1672, 2097, 2983
PscI	ACATGT	1 cut(s)	2514
Psp124BI	GAGCTC	4 cut(s)	203, 339, 1011, 1448
Psp5II	RGGWCCY	7 cut(s)	265, 349, 661, 1537, 1672, 2097, 2983
Psp6I	CCWGG	5 cut(s)	192, 664, 1170, 1317, 2961
PspCI	CACGTG	6 cut(s)	1906, 1927, 2148, 2538, 2668, 2990
PspEI	GGTNACC	1 cut(s)	724
PspFI	CCCAGC	3 cut(s)	36, 1990, 2491
PspGI	CCWGG	5 cut(s)	192, 664, 1170, 1317, 2961
PspOMI	GGGCCC	2 cut(s)	1853, 2958
PspPPI	RGGWCCY	7 cut(s)	265, 349, 661, 1537, 1672, 2097, 2983
PspXI	VCTCGAGB	1 cut(s)	293
PsrI	GAACNNNNNNTAC	4 cut(s)	2126, 2158, 2741, 2773
PsuI	RGATCY	4 cut(s)	595, 1224, 1357, 1744
PteI	GCGCGC	2 cut(s)	2004, 2006
PvuI	CGATCG	1 cut(s)	900
PvuII	CAGCTG	2 cut(s)	1960, 2777
RruI	TCGCGA	1 cut(s)	1236
RseI	CAYNNNNRTG	5 cut(s)	1002, 1665, 1682, 2453, 3032
Rsr2I	CGGWCCG	5 cut(s)	1294, 2103, 2286, 2323, 3163
RsrII	CGGWCCG	5 cut(s)	1294, 2103, 2286, 2323, 3163
SacI	GAGCTC	4 cut(s)	203, 339, 1011, 1448
SalI	GTCGAC	2 cut(s)	935, 2813
SapI	GCTCTTC	2 cut(s)	476, 2546
SaqAI	TTAA	5 cut(s)	171, 1568, 2294, 2897, 3170
Sau3AI	GATC	9 cut(s)	135, 342, 595, 897, 1224, 1357, 1713, 1744, 2574
ScaI	AGTACT	1 cut(s)	1028
SexAI	ACCWGGT	1 cut(s)	1170
SfaNI	GCATC	5 cut(s)	748, 1559, 1882, 1989, 2232
SfcI	CTRYAG	2 cut(s)	1974, 3030
SfoI	GGCGCC	1 cut(s)	555
Sfr274I	CTCGAG	3 cut(s)	293, 338, 473
SgrAI	CRCCGGYG	1 cut(s)	3121
SlaI	CTCGAG	3 cut(s)	293, 338, 473
SmaI	CCCGGG	2 cut(s)	1141, 2915
SmiMI	CAYNNNNRTG	5 cut(s)	1002, 1665, 1682, 2453, 3032
SmlI	CTYRAG	3 cut(s)	293, 338, 473
SmoI	CTYRAG	3 cut(s)	293, 338, 473
Sse9I	AATT	5 cut(s)	522, 915, 1253, 1770, 2563
SseBI	AGGCCT	2 cut(s)	928, 2764
SspDI	GGCGCC	1 cut(s)	553
SspMI	CTAG	3 cut(s)	960, 1340, 2853
SstI	GAGCTC	4 cut(s)	203, 339, 1011, 1448
StuI	AGGCCT	2 cut(s)	928, 2764
StyI	CCWWGG	2 cut(s)	1479, 2947
TaqII	GACCGA	1 cut(s)	2907
TasI	AATT	5 cut(s)	522, 915, 1253, 1770, 2563
TatI	WGTACW	3 cut(s)	1026, 2142, 2250
TfiI	GAWTC	8 cut(s)	499, 955, 994, 1041, 1555, 1797, 1996, 2875
Tru1I	TTAA	5 cut(s)	171, 1568, 2294, 2897, 3170
Tru9I	TTAA	5 cut(s)	171, 1568, 2294, 2897, 3170
TscAI	CASTG	4 cut(s)	1652, 1667, 1755, 3034
TseFI	GTSAC	2 cut(s)	724, 2647
Tsp45I	GTSAC	2 cut(s)	724, 2647
TspGWI	ACGGA	8 cut(s)	1082, 1166, 1219, 1554, 2069, 2126, 2189, 2644
TspMI	CCCGGG	2 cut(s)	1139, 2913
TspRI	CASTG	4 cut(s)	1652, 1667, 1755, 3034
VneI	GTGCAC	1 cut(s)	2663
XapI	RAATTY	2 cut(s)	522, 915
XceI	RCATGY	1 cut(s)	2518
XcmI	CCANNNNNNNNNTGG	2 cut(s)	211, 2455
XhoI	CTCGAG	3 cut(s)	293, 338, 473
XmaI	CCCGGG	2 cut(s)	1139, 2913
XmiI	GTMKAC	2 cut(s)	936, 2814
XmnI	GAANNNNTTC	1 cut(s)	398
XspI	CTAG	3 cut(s)	960, 1340, 2853
ZrmI	AGTACT	1 cut(s)	1028
Zsp2I	ATGCAT	1 cut(s)	1875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.