RLG00000005249

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
66213404 .. 66216685
3282 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005249

Sequence Viewer

Length: 3282 bp
ATGACCGGAACGGTGTCGTTTCAGCAAACCCCACCCCCACACTCCCACTCCCAACCCCAACCCCAACCCCAATCCCAGCAGCCACAGCCACAGCCACAGCCACAGCCACAGCCAGAACCACCACAAACGCAACCGCAACAGCCACCTCAGCCGCAGAGGGTGATCAGGAAGCTCGTCGTGGAAGTGGTGGAAGCACGTAACCTTTTACCTAAAGATGGCCAGGGGAGCTCCAGCGCTTACGTGGTGGCGGACTTCGACGGCCAGCGGAAGCGGACGGCCACCAAGTACAAGGACCTCAACCCCGTCTGGAACGAGCCGCTCGAGTTCGTCGTCTCCGACCCGGACAACATGGACTACGAGGAGCTCGAGATCGAGGTCCTCAACGACAAGCGCTACGGCAACAGCGGCACCGCGCGTAAGAACCACTTCCTCGGCCGGGTGAAGCTCTACGGCACTCAGTTCTCCAAGCGCGGCGACGAGGGTTTGGTGTATTTCCAGCTCGAGAAGAAGAGCGTGTTCAGTTGGATTAGAGGCGAAATCGGGCTCAGAATTTATTACTACGACGAGTTAGTGGACGAGGCGCCGCCGCAGCAGCAGCAGCAGCAACAACCGCCGCTGGAGGATCCGCCGCCGGAGAGGCCGAGGTCTCCGGGCTTTGTGGTGGTCGAGGAAGGGAGGGTGTTTCAGGTCCCTGGAGGACACGTTGAGACTACTACATTTCATGAAGGCTCGTACTCGCCGCCGGTTGTGGTCACCGACCAATCGCATCCGCAGATGGTTCATATGCACGGTCATCCGCCGCCGGGTCAGGAAATGCACGGTCACGGTCATCCGCAGCCGGGTCAGGAAATGCACGGTCACGGTCATCCGCCGCCCGGTCAGGAAATGCACGGTCATCCCCTGCCGGAGGTTCATTTTCAGCAGGAGGTGAGGAAGATGGAGACTCACAGGGTTGCTCCGATGGGCGAGAGAGTGAGAATTCCAAGGAGGCCTAACGTCGACTTCTCTCCGAAAGTGATTCCTGGAAAGTTCGCGGCGGAGACGACGGCGGAGAGGATTCAACCCTGTGAGCTGGTCGAGCCTATGCAGTACTTGTTCATCAGAATCGTCAAGGCCCGTGGACTCGCGCCGAACGAGAGCCCCTACGTCAAGGTCCGTACAAATAGCCACCTCGTGAAGTCGAAAATGGCCGTTCACCGGCCGGGCGAGCCAACGGACTCGCCGGAGTGGAACCAGGTCTTCGCACTCGCTCACAACCGCCCTGACTCAGTGAGTTCCACATTGGAGATCTCCGTTCGCGACTCGCCGTCGGAGCAATTCTTAGGCGGCGTATGCTTCGACCTCTCCGACGTGCCGGTCCGAGACCCACCGGACAGTCCCCTTGCTCCGCAGTGGTACAGACTAGAAGGCGGAGCCGGAGATCCAAATTCCGGTAGAGTATCCGGCGATATCCAGCTCTCTGTTTGGATAGGAACACAAGCTGACGACGCGTTTCCTGAAGCATGGAGCTCCGACGCACCGTACGTGTCCCACACGCGCTCCAAGGTGTACCAGTCCCCGAAGCTCTGGTATCTGAGAATGACGGTTATGGAGGTTCAGGACCTCCACATTGCATCGAATCTACCTCCGTTAACGGCTCCGGAAATCCGAGTCAAAGCTCAGCTCGGGTCTCAGTCGGCTCGAACCCGGCGCGGGTCCATGAACAACCACTGCGCCTCGTTTCACTGGAACGAGGACCTCATATTCGTGGCGAGTGAGCCTCTCGAAGACTCGCTGATTCTGCTCGTGGAGGACCGCACCAACAAGGATCCAGTGCTCCTCGGCCACATCGTAATTCCGGTGAACTCCATTGAGCAGCGAATCGACGAGCGCTACGTGGCGTCGAAATGGTTGCCGCTGGAAGGCAGCGGAGGCGGGCCCTACTGCGGCAGAATGCATCTCCGCCTTTGCTTGGAGGGTGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTTCGGCCCACGGCTAAGCAGCTGTGGAAGCCGGCTGTAGGCATTTTGGAGCTGGGGATTCTCGGCGCGCGCGGCTTGCTTCCGATGAAAGCTAAATCCGGTGGGAAAGGCTCCACGGACGCTTACTGTGTGGCCAAGTATGGTAAAAAATGGGTCAGGACCCGGACCGTGACGGACAGCTTCGACCCGCGCTGGAACGAACAGTACACGTGGCAAGTATATGACCCCTGCACCGTCCTCACCGTTGCTGTGTTTGACAACTGGCGCATGTTGGCTGACGTCACAGAGGAAAAGCAGGACTTCCGTATAGGGAAAATACGAATACGCATCTCTACGCTGGAGAGCAACAGGGTGTACAAGAACTCGTACCCGTTGCTGGTTTTGTCCCGGACCGGGTTAAAGAAAATGGGCGAGATAGAGCTGGCGGTCCGGTTCGCCTGCCCGTCCTTGCTGCCAGAGACGTGCGCGGTTTACGGGCAGCCATTGCTGCCCAGAATGCACTACCTCCGCCCTCTCGGGGTGGCTCAGCAGGAGGCGCTGAGAGGGGCAGCTACGCGTATGGTGGCAGCGTGGCTTGCACGCTCCGAGCCGCCGCTGGGGCCGGAGGTGGTGCGGTACATGTTGGACGCGGACTCGCACACGTGGAGCATGAGGAAGAGCAAAGCGAATTGGTTTCGGATCGTGGCGGTGCTGGCGTGGTTGGTCGGGTTAGCGAAGTGGTTGGATGATATACGGAGGTGGAGGAACCCGGTGACGACGGTTTTGGTGCACGTGTTGTATTTGGTTCTGGTTTGGTACCCGGATTTGATAGTCCCGACCGGGTTTCTATATGTGTTTCTGATTGGGGTTTGGTACTACCGGTTCAGGCCCAAGATACCAGCTGGAATGGACCTCCGGCTCTCTCAGGCGGATACAGTCGACCCGGATGAACTTGATGAGGAGTTTGATACTTTTCCCAGCTCGAAATCTCCGGATGTGATTCGAGCCCGGTATGACCGGTTAAGAATGCTGGCGGCCCGGGTCCAAACTGTTTTGGGCGACTTTGCGGCCCAAGGAGAGCGGGCCCAGGCCCTTGTGAGCTGGAGGGACCCACGTGCTACAAAGTTGTTCATAGGAGTGTGCTTGCTTATCACTGTGGTGCTATATGCTGTGCCACCCAAAATGGTTGCGGTGGCATTGGGGTTTTACTACCTGCGCCACCCGATGTTCCGAGACCCAATGCCGCCGGCGAGCCTCAACTTTTTCCGGAGGCTTCCGAGCCTATCGGACCGGTTAATGTAG

Protein Analysis

1094

Amino Acids

123.65

Weight (kDa)

7.68

Isoelectric Point (pI)

54.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 57 - 150 2e-18 C2 domain
C2 PF00168 364 - 468 2.6e-08 C2 domain
C2 PF00168 523 - 633 1.1e-06 C2 domain
C2 PF00168 681 - 792 5.3e-19 C2 domain
PRT_C PF08372 938 - 1093 6e-72 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015951)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74720
fragaria_vesca FvH4_5g15460
malus_domestica MD06G1188400.v1.1
prunus_persica Prupe.5G186600_v2.0.a1
pyrus_communis pycom06g16700
rosa_chinensis RchiOBHm_Chr7g0180621
rosa_laevigata RLG00000005249
rosa_multiflora Rmu_co8415707.1_g000001
rosa_roxburghii Rroxscaffold_3G00272730
rosa_rugosa Rorug06G0434600
rosa_samantha Rh7AG035700 Rh7BG035600 Rh7CG037300 Rh7DG035900
rosa_wichuraiana Rw7G002940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1355
AatII GACGTC 1 cut(s) 2283
Acc36I ACCTGC 1 cut(s) 3201
Acc65I GGTACC 1 cut(s) 2796
AccB1I GGYRCC 3 cut(s) 407, 580, 2796
AccBSI CCGCTC 2 cut(s) 319, 3061
AccI GTMKAC 2 cut(s) 999, 2919
AccIII TCCGGA 3 cut(s) 1639, 2971, 3246
AclWI GGATC 6 cut(s) 617, 630, 1415, 1802, 1815, 2687
AcoI YGGCCR 8 cut(s) 217, 259, 276, 433, 1188, 1199, 1822, 2133
AcsI RAATTY 3 cut(s) 549, 978, 1426
AcuI CTGAAG 1 cut(s) 1518
AcvI CACGTG 6 cut(s) 1969, 1990, 2211, 2643, 2773, 3095
AcyI GRCGYC 3 cut(s) 581, 1880, 2280
AdeI CACNNNGTG 1 cut(s) 1174
AfeI AGCGCT 3 cut(s) 235, 392, 1871
AflIII ACRYGT 9 cut(s) 700, 1488, 1524, 1989, 2208, 2555, 2619, 2640, 2772
AgeI ACCGGT 3 cut(s) 2859, 2997, 3270
AgsI TTSAA 1 cut(s) 1061
AhdI GACNNNNNGTC 1 cut(s) 1306
AjiI CACGTC 2 cut(s) 1351, 2463
AjnI CCWGG 5 cut(s) 219, 691, 1021, 1233, 3066
AleI CACNNNNGTG 1 cut(s) 3137
Alw21I GWGCWC 5 cut(s) 230, 366, 1511, 1818, 2772
Alw26I GTCTC 9 cut(s) 337, 651, 701, 935, 1034, 1356, 1674, 2453, 3207
Alw44I GTGCAC 1 cut(s) 2768
AlwI GGATC 6 cut(s) 617, 630, 1415, 1802, 1815, 2687
Ama87I CYCGRG 6 cut(s) 320, 365, 500, 1664, 2516, 3018
Aor13HI TCCGGA 3 cut(s) 1639, 2971, 3246
Aor51HI AGCGCT 3 cut(s) 235, 392, 1871
ApaI GGGCCC 2 cut(s) 1920, 3067
ApaLI GTGCAC 1 cut(s) 2768
ApoI RAATTY 3 cut(s) 549, 978, 1426
ArsI GACNNNNNNTTYG 4 cut(s) 1727, 1759, 2746, 2778
AsiGI ACCGGT 3 cut(s) 2859, 2997, 3270
Asp700I GAANNNNTTC 1 cut(s) 425
Asp718I GGTACC 1 cut(s) 2796
AsuHPI GGTGA 8 cut(s) 172, 451, 745, 940, 1187, 1852, 2233, 2764
AvaI CYCGRG 6 cut(s) 320, 365, 500, 1664, 2516, 3018
BaeGI GKGCMC 3 cut(s) 1920, 2772, 3067
BalI TGGCCA 2 cut(s) 219, 2135
BamHI GGATCC 2 cut(s) 622, 1807
BanI GGYRCC 3 cut(s) 407, 580, 2796
BanII GRGCYC 8 cut(s) 230, 366, 546, 1142, 1511, 1920, 2989, 3067
BauI CACGAG 2 cut(s) 1172, 1784
BbrPI CACGTG 6 cut(s) 1969, 1990, 2211, 2643, 2773, 3095
BbsI GAAGAC 2 cut(s) 1231, 1773
Bbv12I GWGCWC 5 cut(s) 230, 366, 1511, 1818, 2772
BbvCI CCTCAGC 1 cut(s) 147
BccI CCATC 4 cut(s) 209, 769, 931, 955
BceAI ACGGC 9 cut(s) 274, 291, 412, 466, 1062, 1175, 1291, 1650, 2028
BcgI CGANNNNNNTGC 2 cut(s) 1873, 1907
BciT130I CCWGG 5 cut(s) 221, 693, 1023, 1235, 3068
BciVI GTATCC 2 cut(s) 1450, 2905
BclI TGATCA 1 cut(s) 162
BcoDI GTCTC 9 cut(s) 337, 651, 701, 935, 1034, 1356, 1674, 2453, 3207
BfaI CTAG 1 cut(s) 1403
BfmI CTRYAG 1 cut(s) 2037
BfoI RGCGCY 5 cut(s) 237, 394, 584, 1873, 2540
BfuAI ACCTGC 1 cut(s) 3201
BfuI GTATCC 2 cut(s) 1450, 2905
BglI GCCNNNNNGGC 2 cut(s) 637, 2599
BglII AGATCT 1 cut(s) 1287
BlpI GCTNAGC 3 cut(s) 1659, 2016, 2526
BmcAI AGTACT 1 cut(s) 1091
BmeRI GACNNNNNGTC 1 cut(s) 1306
BmeT110I CYCGRG 6 cut(s) 320, 365, 500, 1664, 2516, 3018
BmgBI CACGTC 2 cut(s) 1351, 2463
BmsI GCATC 4 cut(s) 775, 1622, 1945, 2337
BpiI GAAGAC 2 cut(s) 1231, 1773
BplI GAGNNNNNCTC 2 cut(s) 1744, 1776
BpmI CTGGAG 5 cut(s) 214, 638, 714, 2360, 3103
Bpu10I CCTNAGC 1 cut(s) 147
Bpu1102I GCTNAGC 3 cut(s) 1659, 2016, 2526
BsaHI GRCGYC 3 cut(s) 581, 1880, 2280
BsaI GGTCTC 4 cut(s) 651, 1356, 1674, 3207
BsaXI ACNNNNNCTCC 8 cut(s) 32, 62, 687, 717, 1523, 1553, 1946, 1976
Bse118I RCCGGY 8 cut(s) 742, 1197, 1354, 2032, 2859, 2997, 3226, 3270
Bse1I ACTGG 4 cut(s) 1552, 1730, 1811, 2267
Bse3DI GCAATG 2 cut(s) 1608, 2483
BseAI TCCGGA 3 cut(s) 1639, 2971, 3246
BseBI CCWGG 5 cut(s) 221, 693, 1023, 1235, 3068
BseGI GGATG 8 cut(s) 766, 793, 829, 865, 895, 2731, 2932, 2980
BseMI GCAATG 2 cut(s) 1608, 2483
BseNI ACTGG 4 cut(s) 1552, 1730, 1811, 2267
BsePI GCGCGC 2 cut(s) 2067, 2069
BseRI GAGGAG 3 cut(s) 374, 1808, 2954
BseSI GKGCMC 3 cut(s) 1920, 2772, 3067
BseX3I CGGCCG 2 cut(s) 433, 1199
BseYI CCCAGC 4 cut(s) 75, 2053, 2596, 2957
BsgI GTGCAG 2 cut(s) 2014, 2215
Bsh1285I CGRYCG 3 cut(s) 436, 1202, 2820
BshNI GGYRCC 3 cut(s) 407, 580, 2796
BshTI ACCGGT 3 cut(s) 2859, 2997, 3270
BsiEI CGRYCG 3 cut(s) 436, 1202, 2820
BsiHKAI GWGCWC 5 cut(s) 230, 366, 1511, 1818, 2772
BsiHKCI CYCGRG 6 cut(s) 320, 365, 500, 1664, 2516, 3018
BsiWI CGTACG 1 cut(s) 1521
BslFI GGGAC 7 cut(s) 674, 1362, 1513, 1540, 2371, 2798, 3101
BsmAI GTCTC 9 cut(s) 337, 651, 701, 935, 1034, 1356, 1674, 2453, 3207
BsmBI CGTCTC 3 cut(s) 337, 1034, 2453
BsmFI GGGAC 7 cut(s) 674, 1362, 1513, 1540, 2371, 2798, 3101
BsmI GAATGC 3 cut(s) 1938, 2502, 3012
Bso31I GGTCTC 4 cut(s) 651, 1356, 1674, 3207
BsoBI CYCGRG 6 cut(s) 320, 365, 500, 1664, 2516, 3018
Bsp120I GGGCCC 2 cut(s) 1916, 3063
Bsp13I TCCGGA 3 cut(s) 1639, 2971, 3246
Bsp1407I TGTACA 1 cut(s) 2355
Bsp143I GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
Bsp1720I GCTNAGC 3 cut(s) 1659, 2016, 2526
Bsp68I TCGCGA 1 cut(s) 1299
BspEI TCCGGA 3 cut(s) 1639, 2971, 3246
BspHI TCATGA 1 cut(s) 721
BspMI ACCTGC 1 cut(s) 3201
BspPI GGATC 6 cut(s) 617, 630, 1415, 1802, 1815, 2687
BspQI GCTCTTC 2 cut(s) 503, 2651
BspT107I GGYRCC 3 cut(s) 407, 580, 2796
BspTNI GGTCTC 4 cut(s) 651, 1356, 1674, 3207
BsrBI CCGCTC 2 cut(s) 319, 3061
BsrDI GCAATG 2 cut(s) 1608, 2483
BsrFI RCCGGY 8 cut(s) 742, 1197, 1354, 2032, 2859, 2997, 3226, 3270
BsrGI TGTACA 1 cut(s) 2355
BsrI ACTGG 4 cut(s) 1552, 1730, 1811, 2267
BssAI RCCGGY 8 cut(s) 742, 1197, 1354, 2032, 2859, 2997, 3226, 3270
BssHII GCGCGC 2 cut(s) 2067, 2069
BssMI GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
BssNI GRCGYC 3 cut(s) 581, 1880, 2280
BssSI CACGAG 2 cut(s) 1172, 1784
BssT1I CCWWGG 3 cut(s) 983, 1542, 3052
Bst2BI CACGAG 2 cut(s) 1172, 1784
Bst2UI CCWGG 5 cut(s) 221, 693, 1023, 1235, 3068
Bst6I CTCTTC 2 cut(s) 503, 2651
BstACI GRCGYC 3 cut(s) 581, 1880, 2280
BstAPI GCANNNNNTGC 1 cut(s) 2485
BstAUI TGTACA 1 cut(s) 2355
BstDSI CCRYGG 3 cut(s) 1117, 2010, 2115
BstEII GGTNACC 1 cut(s) 751
BstENI CCTNNNNNAGG 1 cut(s) 905
BstF5I GGATG 8 cut(s) 766, 793, 829, 865, 895, 2731, 2932, 2980
BstH2I RGCGCY 5 cut(s) 237, 394, 584, 1873, 2540
BstKTI GATC 7 cut(s) 165, 372, 625, 1290, 1423, 1810, 2682
BstMAI GTCTC 9 cut(s) 337, 651, 701, 935, 1034, 1356, 1674, 2453, 3207
BstMBI GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
BstMCI CGRYCG 3 cut(s) 436, 1202, 2820
BstNI CCWGG 5 cut(s) 221, 693, 1023, 1235, 3068
BstNSI RCATGY 2 cut(s) 2272, 2623
BstPI GGTNACC 1 cut(s) 751
BstSFI CTRYAG 1 cut(s) 2037
BstSLI GKGCMC 3 cut(s) 1920, 2772, 3067
BstV2I GAAGAC 2 cut(s) 1231, 1773
BstX2I RGATCY 4 cut(s) 622, 1287, 1420, 1807
BstYI RGATCY 4 cut(s) 622, 1287, 1420, 1807
BstZI CGGCCG 2 cut(s) 433, 1199
BsuI GTATCC 2 cut(s) 1450, 2905
BtgI CCRYGG 3 cut(s) 1117, 2010, 2115
BtrI CACGTC 2 cut(s) 1351, 2463
BtsCI GGATG 8 cut(s) 766, 793, 829, 865, 895, 2731, 2932, 2980
BtsI GCAGTG 2 cut(s) 1397, 1708
BtsIMutI CAGTG 6 cut(s) 1275, 1397, 1708, 1723, 1818, 3132
BtuMI TCGCGA 1 cut(s) 1299
BveI ACCTGC 1 cut(s) 3201
CciI TCATGA 1 cut(s) 721
Cfr10I RCCGGY 8 cut(s) 742, 1197, 1354, 2032, 2859, 2997, 3226, 3270
Cfr9I CCCGGG 1 cut(s) 3018
CpoI CGGWCCG 5 cut(s) 1357, 2166, 2391, 2428, 3268
CseI GACGC 5 cut(s) 1496, 1523, 1869, 2129, 2636
CsiI ACCWGGT 1 cut(s) 1233
CspAI ACCGGT 3 cut(s) 2859, 2997, 3270
CspCI CAANNNNNGTGG 2 cut(s) 1099, 1134
CspI CGGWCCG 5 cut(s) 1357, 2166, 2391, 2428, 3268
CviAII CATG 7 cut(s) 349, 722, 1503, 1699, 2269, 2620, 2650
DinI GGCGCC 1 cut(s) 582
DpnI GATC 7 cut(s) 164, 371, 624, 1289, 1422, 1809, 2681
DpnII GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
DraIII CACNNNGTG 1 cut(s) 1174
DrdI GACNNNNNNGTC 1 cut(s) 1355
DriI GACNNNNNGTC 1 cut(s) 1306
DseDI GACNNNNNNGTC 1 cut(s) 1355
EaeI YGGCCR 8 cut(s) 217, 259, 276, 433, 1188, 1199, 1822, 2133
EagI CGGCCG 2 cut(s) 433, 1199
Eam1104I CTCTTC 2 cut(s) 503, 2651
Eam1105I GACNNNNNGTC 1 cut(s) 1306
EarI CTCTTC 2 cut(s) 503, 2651
Ecl136II GAGCTC 3 cut(s) 228, 364, 1509
EclXI CGGCCG 2 cut(s) 433, 1199
Eco130I CCWWGG 3 cut(s) 983, 1542, 3052
Eco147I AGGCCT 1 cut(s) 991
Eco24I GRGCYC 8 cut(s) 230, 366, 546, 1142, 1511, 1920, 2989, 3067
Eco31I GGTCTC 4 cut(s) 651, 1356, 1674, 3207
Eco32I GATATC 1 cut(s) 1450
Eco47III AGCGCT 3 cut(s) 235, 392, 1871
Eco52I CGGCCG 2 cut(s) 433, 1199
Eco53kI GAGCTC 3 cut(s) 228, 364, 1509
Eco57I CTGAAG 1 cut(s) 1518
Eco72I CACGTG 6 cut(s) 1969, 1990, 2211, 2643, 2773, 3095
Eco88I CYCGRG 6 cut(s) 320, 365, 500, 1664, 2516, 3018
Eco91I GGTNACC 1 cut(s) 751
EcoICRI GAGCTC 3 cut(s) 228, 364, 1509
EcoNI CCTNNNNNAGG 1 cut(s) 905
EcoO109I RGGNCCY 9 cut(s) 292, 376, 688, 1600, 1735, 1917, 2160, 3070, 3088
EcoO65I GGTNACC 1 cut(s) 751
EcoRI GAATTC 1 cut(s) 978
EcoRII CCWGG 5 cut(s) 219, 691, 1021, 1233, 3066
EcoRV GATATC 1 cut(s) 1450
EcoT14I CCWWGG 3 cut(s) 983, 1542, 3052
EcoT22I ATGCAT 1 cut(s) 1938
EcoT38I GRGCYC 8 cut(s) 230, 366, 546, 1142, 1511, 1920, 2989, 3067
EgeI GGCGCC 1 cut(s) 582
EheI GGCGCC 1 cut(s) 582
ErhI CCWWGG 3 cut(s) 983, 1542, 3052
Esp3I CGTCTC 3 cut(s) 337, 1034, 2453
FaeI CATG 7 cut(s) 352, 725, 1506, 1702, 2272, 2623, 2653
FalI AAGNNNNNCTT 4 cut(s) 410, 442, 2285, 2317
FaqI GGGAC 7 cut(s) 674, 1362, 1513, 1540, 2371, 2798, 3101
FatI CATG 7 cut(s) 348, 721, 1502, 1698, 2268, 2619, 2649
FauI CCCGC 4 cut(s) 1685, 1907, 2196, 3054
FauNDI CATATG 1 cut(s) 783
FbaI TGATCA 1 cut(s) 162
FblI GTMKAC 2 cut(s) 999, 2919
FokI GGATG 8 cut(s) 753, 780, 816, 852, 882, 2738, 2939, 2987
FriOI GRGCYC 8 cut(s) 230, 366, 546, 1142, 1511, 1920, 2989, 3067
FspBI CTAG 1 cut(s) 1403
GsaI CCCAGC 4 cut(s) 79, 2057, 2600, 2961
GsuI CTGGAG 5 cut(s) 214, 638, 714, 2360, 3103
HaeII RGCGCY 5 cut(s) 237, 394, 584, 1873, 2540
HgaI GACGC 5 cut(s) 1496, 1523, 1869, 2129, 2636
Hin1I GRCGYC 3 cut(s) 581, 1880, 2280
Hin1II CATG 7 cut(s) 352, 725, 1506, 1702, 2272, 2623, 2653
HincII GTYRAC 3 cut(s) 1000, 1632, 2920
HindII GTYRAC 3 cut(s) 1000, 1632, 2920
HpaI GTTAAC 1 cut(s) 1632
HphI GGTGA 8 cut(s) 172, 451, 745, 940, 1187, 1852, 2233, 2764
HpyAV CCTTC 4 cut(s) 665, 719, 1400, 1895
Hsp92I GRCGYC 3 cut(s) 581, 1880, 2280
Hsp92II CATG 7 cut(s) 352, 725, 1506, 1702, 2272, 2623, 2653
KasI GGCGCC 1 cut(s) 580
KflI GGGWCCC 1 cut(s) 3088
Kpn2I TCCGGA 3 cut(s) 1639, 2971, 3246
KpnI GGTACC 1 cut(s) 2800
KroI GCCGGC 2 cut(s) 2032, 3226
KroNI GCCGGC 2 cut(s) 2034, 3228
Ksp22I TGATCA 1 cut(s) 162
KspAI GTTAAC 1 cut(s) 1632
Kzo9I GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
LguI GCTCTTC 2 cut(s) 503, 2651
LweI GCATC 4 cut(s) 775, 1622, 1945, 2337
MabI ACCWGGT 1 cut(s) 1233
MaeI CTAG 1 cut(s) 1403
MaeIII GTNAC 7 cut(s) 197, 751, 821, 857, 2170, 2281, 2752
MalI GATC 7 cut(s) 164, 371, 624, 1289, 1422, 1809, 2681
MauBI CGCGCGCG 1 cut(s) 2069
MbiI CCGCTC 2 cut(s) 319, 3061
MboI GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
MboII GAAGA 6 cut(s) 517, 520, 946, 1231, 1778, 2668
MflI RGATCY 4 cut(s) 622, 1287, 1420, 1807
MlsI TGGCCA 2 cut(s) 219, 2135
MluCI AATT 6 cut(s) 549, 978, 1316, 1426, 1833, 2668
MluI ACGCGT 2 cut(s) 1488, 2555
MluNI TGGCCA 2 cut(s) 219, 2135
Mly113I GGCGCC 1 cut(s) 581
MlyI GAGTC 8 cut(s) 937, 1116, 1211, 1259, 1295, 1659, 1763, 2627
MmeI TCCRAC 7 cut(s) 360, 503, 1290, 1371, 1536, 2604, 2703
Mox20I TGGCCA 2 cut(s) 219, 2135
Mph1103I ATGCAT 1 cut(s) 1938
MreI CGCCGGCG 1 cut(s) 3226
MroI TCCGGA 3 cut(s) 1639, 2971, 3246
MroNI GCCGGC 2 cut(s) 2032, 3226
MroXI GAANNNNTTC 1 cut(s) 425
MscI TGGCCA 2 cut(s) 219, 2135
MseI TTAA 4 cut(s) 1631, 2399, 3002, 3275
MslI CAYNNNNRTG 3 cut(s) 1745, 3116, 3137
Msp20I TGGCCA 2 cut(s) 219, 2135
MspA1I CMGCKG 8 cut(s) 265, 405, 616, 1897, 1908, 2023, 2596, 2882
Mva1269I GAATGC 3 cut(s) 1938, 2502, 3012
MvaI CCWGG 5 cut(s) 221, 693, 1023, 1235, 3068
NaeI GCCGGC 2 cut(s) 2034, 3228
NarI GGCGCC 1 cut(s) 581
NdeI CATATG 1 cut(s) 783
NdeII GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
NgoMIV GCCGGC 2 cut(s) 2032, 3226
NlaIII CATG 7 cut(s) 352, 725, 1506, 1702, 2272, 2623, 2653
NmeAIII GCCGAG 4 cut(s) 411, 666, 1800, 2043
NmuCI GTSAC 6 cut(s) 751, 821, 857, 2170, 2281, 2752
NruI TCGCGA 1 cut(s) 1299
NsiI ATGCAT 1 cut(s) 1938
NspI RCATGY 2 cut(s) 2272, 2623
OliI CACNNNNGTG 1 cut(s) 3137
PaeR7I CTCGAG 3 cut(s) 320, 365, 500
PagI TCATGA 1 cut(s) 721
PauI GCGCGC 2 cut(s) 2067, 2069
PceI AGGCCT 1 cut(s) 991
PciI ACATGT 1 cut(s) 2619
PciSI GCTCTTC 2 cut(s) 503, 2651
PctI GAATGC 3 cut(s) 1938, 2502, 3012
PdiI GCCGGC 2 cut(s) 2034, 3228
PdmI GAANNNNTTC 1 cut(s) 425
PfeI GAWTC 8 cut(s) 1018, 1057, 1104, 1618, 1777, 1860, 2059, 2980
Pfl23II CGTACG 1 cut(s) 1521
PfoI TCCNGGA 2 cut(s) 1021, 2387
PinAI ACCGGT 3 cut(s) 2859, 2997, 3270
PleI GAGTC 8 cut(s) 937, 1116, 1211, 1259, 1295, 1658, 1763, 2627
PluTI GGCGCC 1 cut(s) 584
PmaCI CACGTG 6 cut(s) 1969, 1990, 2211, 2643, 2773, 3095
PmlI CACGTG 6 cut(s) 1969, 1990, 2211, 2643, 2773, 3095
PpsI GAGTC 8 cut(s) 937, 1116, 1211, 1259, 1295, 1658, 1763, 2627
PpuMI RGGWCCY 7 cut(s) 292, 376, 688, 1600, 1735, 2160, 3088
PscI ACATGT 1 cut(s) 2619
Psp124BI GAGCTC 3 cut(s) 230, 366, 1511
Psp5II RGGWCCY 7 cut(s) 292, 376, 688, 1600, 1735, 2160, 3088
Psp6I CCWGG 5 cut(s) 219, 691, 1021, 1233, 3066
PspCI CACGTG 6 cut(s) 1969, 1990, 2211, 2643, 2773, 3095
PspEI GGTNACC 1 cut(s) 751
PspFI CCCAGC 4 cut(s) 75, 2053, 2596, 2957
PspGI CCWGG 5 cut(s) 219, 691, 1021, 1233, 3066
PspLI CGTACG 1 cut(s) 1521
PspOMI GGGCCC 2 cut(s) 1916, 3063
PspPPI RGGWCCY 7 cut(s) 292, 376, 688, 1600, 1735, 2160, 3088
PspXI VCTCGAGB 1 cut(s) 320
PsrI GAACNNNNNNTAC 4 cut(s) 2189, 2221, 2846, 2878
PsuI RGATCY 4 cut(s) 622, 1287, 1420, 1807
PteI GCGCGC 2 cut(s) 2067, 2069
PvuII CAGCTG 2 cut(s) 2023, 2882
RruI TCGCGA 1 cut(s) 1299
RseI CAYNNNNRTG 3 cut(s) 1745, 3116, 3137
Rsr2I CGGWCCG 5 cut(s) 1357, 2166, 2391, 2428, 3268
RsrII CGGWCCG 5 cut(s) 1357, 2166, 2391, 2428, 3268
SacI GAGCTC 3 cut(s) 230, 366, 1511
SalI GTCGAC 2 cut(s) 998, 2918
SapI GCTCTTC 2 cut(s) 503, 2651
SaqAI TTAA 4 cut(s) 1631, 2399, 3002, 3275
Sau3AI GATC 7 cut(s) 162, 369, 622, 1287, 1420, 1807, 2679
ScaI AGTACT 1 cut(s) 1091
SchI GAGTC 8 cut(s) 937, 1116, 1211, 1259, 1295, 1659, 1763, 2627
SexAI ACCWGGT 1 cut(s) 1233
SfaNI GCATC 4 cut(s) 775, 1622, 1945, 2337
SfcI CTRYAG 1 cut(s) 2037
SfoI GGCGCC 1 cut(s) 582
Sfr274I CTCGAG 3 cut(s) 320, 365, 500
SgrAI CRCCGGYG 1 cut(s) 3226
SlaI CTCGAG 3 cut(s) 320, 365, 500
SmaI CCCGGG 1 cut(s) 3020
SmiMI CAYNNNNRTG 3 cut(s) 1745, 3116, 3137
SmlI CTYRAG 3 cut(s) 320, 365, 500
SmoI CTYRAG 3 cut(s) 320, 365, 500
Sse9I AATT 6 cut(s) 549, 978, 1316, 1426, 1833, 2668
SseBI AGGCCT 1 cut(s) 991
SspDI GGCGCC 1 cut(s) 580
SspMI CTAG 1 cut(s) 1403
SstI GAGCTC 3 cut(s) 230, 366, 1511
StuI AGGCCT 1 cut(s) 991
StyI CCWWGG 3 cut(s) 983, 1542, 3052
TasI AATT 6 cut(s) 549, 978, 1316, 1426, 1833, 2668
TatI WGTACW 4 cut(s) 285, 1089, 2205, 2355
TfiI GAWTC 8 cut(s) 1018, 1057, 1104, 1618, 1777, 1860, 2059, 2980
Tru1I TTAA 4 cut(s) 1631, 2399, 3002, 3275
Tru9I TTAA 4 cut(s) 1631, 2399, 3002, 3275
TscAI CASTG 6 cut(s) 1275, 1397, 1715, 1730, 1818, 3139
TseFI GTSAC 6 cut(s) 751, 821, 857, 2170, 2281, 2752
Tsp45I GTSAC 6 cut(s) 751, 821, 857, 2170, 2281, 2752
TspDTI ATGAA 9 cut(s) 710, 738, 770, 902, 1087, 1715, 2102, 2943, 3100
TspGWI ACGGA 8 cut(s) 1145, 1229, 1282, 1617, 2132, 2189, 2294, 2749
TspMI CCCGGG 1 cut(s) 3018
TspRI CASTG 6 cut(s) 1275, 1397, 1715, 1730, 1818, 3139
VneI GTGCAC 1 cut(s) 2768
XagI CCTNNNNNAGG 1 cut(s) 905
XapI RAATTY 3 cut(s) 549, 978, 1426
XceI RCATGY 2 cut(s) 2272, 2623
XcmI CCANNNNNNNNNTGG 1 cut(s) 238
XhoI CTCGAG 3 cut(s) 320, 365, 500
XmaI CCCGGG 1 cut(s) 3018
XmiI GTMKAC 2 cut(s) 999, 2919
XmnI GAANNNNTTC 1 cut(s) 425
XspI CTAG 1 cut(s) 1403
ZraI GACGTC 1 cut(s) 2281
ZrmI AGTACT 1 cut(s) 1091
Zsp2I ATGCAT 1 cut(s) 1938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.