Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0015951

Physical Location & Seq

Genomic Coordinates Reverse (-)

2515177 .. 2518895

Gene Structure 3719 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG037300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3228 bp

ATGACCGGAACGGTGTCGTTTCAGCAAACCCCACCCCAACACTCCCACTCCCAACCCCAACCCCAACCCCAACCACAGCCACAGCCACAGCCACAACCACAACCAGAACCACCGCAACCGCAACAGCCACCTCAGCCGCAGAGGGTGATCAGGAAGCTCGTCGTGGAAGTGGTGGACGCACTTAACCTTTTACCTAAAGATGGCCAGGGGAGCTCCAGCGCTTACGTGGTGGCGGACTTCGACGGCCAGCGGAAGCGGACGGCCACCAAATACAAGGACCTCAACCCCGTCTGGAACGAGCCGCTCGAGTTCGTCGTCTCCGACCCGGACAACATGGACTACGAGGAGCTCGAGATCGAGGTCCTCAACGACAAGCGCTACGGCAACAGCGGCACGGCGCGTAAGAACCACTTCCTCGGCCGGGTGAAGCTCTACGGGACTCAGTTCGCCAAGCGCGGCGAAGAGGGTTTGGTGTATTTCCAGCTCGAGAAGAAGAGCGTGTTCAGTTGGATTAGAGGCGAAATCGGGCTCAGAATTTGTTACTACGACGAGTTAGTGGACGAGGCGCCGCCGCAGCAGCAGCAGCAACAACCGCCGCTGGAGGATCCGCCGCCGGAGAGGCCGAGGTCTCCGGCGGTTGTGGTGGTCGAGGAAGGGAGGGTGTTTGAGGATCCTGGGGGACACGTTGAGACTACTACATTTCATGAAGGCTCGTACTCGCCGCCGGTTGTGATCACCGAGCAATCGCATCCGCAGATGGTTCATATGCACGGTCATCCGCCGCCGGGTCAGGAAATGCACGGTCACGGACATCCGCCGCCCGGTCAGGAAATGCACGGTCATCCGCCGCCGGAGGTTCATTTTCAGTCGGAGGTGAGGAAGATGGAGACTCAGAGGGTTGCTCCGATCGGCGAGAGAGTGAGAATTCCGCGGAGGCCTAACGTCGACTTCTCTCCGAAAGTGATTCCTAGAAAGTTCGCGGCGGAGACAACGGCGGAGAGGATTCATCCCTGTGAGCTCGTCGAGCCTATGCAGTACTTGTTCATCAGAATCGTCAAGGCCCGTGGACTCGCGCCGAACGAGAGCCCCTACGTCAAGGTCCGTACAAATAGCCACCTCGTGAAGTCGAAAATGGCGGTTCACCGGACCGGGGAGCCGACGGACTCGCCGGAGTGGAACCAGGTCTTCGCACTCGCTCACAACCGCCCTGACTCGGTGAGTTCCACATTGGAGATCTCCGTTCGCGACTCGCCGTCGGAGCAATTCTTAGGCGGCGTGTGCTTCGACCTCTCCGACGTGCCGGTCCGAGACCCACCGGACAGTCCCCTGGCTCCACAATGGTACAGACTAGAAGGAGGAGCCGGAGATCCAAACTCCGGTAGAGTATCCGGCGATATCCAGCTCTCTGTTTGGATAGGAACACAAGCCGACGACGCGTTCCCTGAAGCATGGAGCTCCGACGCACCGTACCTGTCCCACACGCGCTCCAAGGTGTACCAGTCCCCGAAGCTCTGGTATCTGAGAATGACGGTTATGGAGGTTCAGGACCTCCACATTGCATCGAATCTACCTCCGTTAACGGCTCCGGAAATCAGAGTCAAAGCTCAGCTCGGGTCTCAGTCGGCTCGAACCCGGCGCGGGTCCATGAACAACCACTGCGCCTCGTTTCACTGGAATGAGGACCTCATCTTCGTGGCGAGTGAGCCTCTCGAAGACTCGCTGATCCTGCTCGTGGAGGACCGCACCAACAAGGATCCAGTGCTCCTCGGCCACGTCGTAATTCTGGTGAACTCCATCGAGCAGAGAATCGACGAGCGCTACGTAGCGTCGAAATGGTTGCCGCTGGAAGGCAGCGGAGGCGGGCCCTACTGCGGCAGAATGCATCTCCGCCTTTGCTTGGAGGGTGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGTGACTTTCGGCCCACGGCTAAGCAGCTGTGGAAGCCGGCTGTAGGCATTTTGGAGCTGGGGATTCTCGGCGCGCGCGGCTTGCTTCCGATGAAAGCTAAATCCGGTGGGAAAGGCTCCACGGACGCTTACTGTGTGGCCAAGTATGGTAAAAAATGGGTCAGGACCCGGACCGTTACGGATAGCTTCGACCCGCGCTGGAACGAACAGTACACGTGGCAAGTATATGACCCCTGCACCGTCCTCACTGTTGCTGTGTTTGACAACTGGCGCATGCTTGCTGACGTCACAGAGGAAAAGCAGGATTTCCGTATAGGGAAAATACGAATACGCATCTCTACGCTGGAGAGCAACAGGGTGTACAAGAACTCGTACCCGTTGCTGGTTTTGTCCCGGACCGGGTTAAAGAAAATGGGCGAGATAGAGCTGGCGGTCCGGTTCGCCTGCCCGTCCTTGCTACCCGAGACGTGCGCGGTTTACGGGCAGCCGTTGCTGCCCAGAATGCACTACCTCCGCCCTCTCGGGGTGGCTCAGCAGGAGGCTTTACGCGGGGCAGCCACACGCATGGTGGCCGCATGGCTAGCACGCTCCGAACCGCCGCTGGGGCCGGAGGTGGTGCGGTACATGTTGGACGCGGACTCGCACACGTGGAGCATGAGGAAGAGCAAAGCGAATTGGTTTCGGATCGTGGCGGTGCTGGCGTGGTTGGTCGGGTTAGCGAAGTGGTTGGATGATATACGGAGGTGGAGGAACCCGGTGACGACAGTTTTGGTGCACGTGTTGTATTTGGTTCTGGTTTGGTACCCGGATTTGATAGTCCCAACCGGGTTTCTATATGTGTTTCTGATTGGGGTTTGGTACTACCGGTTCAGGCCTAAGATACCAGCTGGAATGGACCTCCGGCTCTCTCAGGCGGATACAGTCGACCCGGATGAACTTGATGAGGAGTTCGATACTTTTCCTAGCTCAAAATCTCCAGATGTGATTCGAGCCCGGTATGACCGATTAAGAATGCTGGCGGCCCGGGTCCAAACGGTTTTGGGAGACTTTGCGGCCCAAGGAGAGCGGGCCCAGGCCCTTGTGAGCTGGAGGGATCCACGTGCTACAAAGTTGTTCATAGGAGTATGCTTGCTTATCACTGTGGTGCTATATGCTGTGCCACCCAAAATGGTTGCGGTGGCATTGGGTTTTTACTACCTGCGCCACCCGATGTTCAGAGACCCAATGCCACCGGCGAGCCTCAACTTTTTCCGGAGGCTTCCGAGCCTGTCGGACCGGTTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009506 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0030054 GO:0031224 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1075

Amino Acids

121.63

Weight (kDa)

7.41

Isoelectric Point (pI)

53.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	52 - 146	5.6e-17	C2 domain
C2	PF00168	346 - 450	5.6e-09	C2 domain
C2	PF00168	505 - 615	5.6e-06	C2 domain
C2	PF00168	663 - 774	5.2e-19	C2 domain
PRT_C	PF08372	920 - 1075	5.8e-72	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74720
fragaria_vesca	FvH4_5g15460
malus_domestica	MD06G1188400.v1.1
prunus_persica	Prupe.5G186600_v2.0.a1
pyrus_communis	pycom06g16700
rosa_chinensis	RchiOBHm_Chr7g0180621
rosa_laevigata	RLG00000005249
rosa_multiflora	Rmu_co8415707.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272730
rosa_rugosa	Rorug06G0434600
rosa_samantha	Rh7AG035700 Rh7BG035600 Rh7CG037300 Rh7DG035900
rosa_wichuraiana	Rw7G002940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1301
AatII	GACGTC	1 cut(s)	2229
Acc36I	ACCTGC	1 cut(s)	3147
Acc65I	GGTACC	1 cut(s)	2742
AccB1I	GGYRCC	2 cut(s)	565, 2742
AccBSI	CCGCTC	2 cut(s)	304, 3007
AccI	GTMKAC	2 cut(s)	945, 2865
AccIII	TCCGGA	2 cut(s)	1585, 3192
AcoI	YGGCCR	7 cut(s)	202, 244, 261, 418, 1768, 2079, 2511
AcsI	RAATTY	2 cut(s)	534, 924
AcuI	CTGAAG	1 cut(s)	1464
AcvI	CACGTG	6 cut(s)	1915, 1936, 2157, 2589, 2719, 3041
AcyI	GRCGYC	2 cut(s)	566, 2226
AdeI	CACNNNGTG	1 cut(s)	1120
AfeI	AGCGCT	3 cut(s)	220, 377, 1817
AflIII	ACRYGT	7 cut(s)	682, 1434, 1935, 2154, 2565, 2586, 2718
AgeI	ACCGGT	2 cut(s)	2805, 3216
AhdI	GACNNNNNGTC	1 cut(s)	1252
AjiI	CACGTC	3 cut(s)	1297, 1774, 2409
AjnI	CCWGG	5 cut(s)	204, 673, 1179, 1326, 3012
AleI	CACNNNNGTG	1 cut(s)	3083
Alw21I	GWGCWC	6 cut(s)	215, 351, 1020, 1457, 1764, 2718
Alw44I	GTGCAC	1 cut(s)	2714
Ama87I	CYCGRG	7 cut(s)	305, 350, 485, 1610, 2402, 2462, 2964
Aor13HI	TCCGGA	2 cut(s)	1585, 3192
Aor51HI	AGCGCT	3 cut(s)	220, 377, 1817
ApaI	GGGCCC	2 cut(s)	1866, 3013
ApaLI	GTGCAC	1 cut(s)	2714
ApeKI	GCWGC	9 cut(s)	574, 577, 580, 583, 1851, 1966, 2425, 2434, 2495
ApoI	RAATTY	2 cut(s)	534, 924
ArsI	GACNNNNNNTTYG	4 cut(s)	1673, 1705, 2692, 2724
AsiGI	ACCGGT	2 cut(s)	2805, 3216
Asp700I	GAANNNNTTC	1 cut(s)	410
Asp718I	GGTACC	1 cut(s)	2742
AsuHPI	GGTGA	8 cut(s)	157, 436, 727, 886, 1133, 1228, 1798, 2710
AsuNHI	GCTAGC	1 cut(s)	2521
AvaI	CYCGRG	7 cut(s)	305, 350, 485, 1610, 2402, 2462, 2964
BaeGI	GKGCMC	3 cut(s)	1866, 2718, 3013
BalI	TGGCCA	2 cut(s)	204, 2081
BamHI	GGATCC	4 cut(s)	604, 670, 1753, 3034
BanI	GGYRCC	2 cut(s)	565, 2742
BanII	GRGCYC	9 cut(s)	215, 351, 531, 1020, 1088, 1457, 1866, 2935, 3013
BauI	CACGAG	2 cut(s)	1118, 1730
BbrPI	CACGTG	6 cut(s)	1915, 1936, 2157, 2589, 2719, 3041
BbsI	GAAGAC	2 cut(s)	1177, 1719
Bbv12I	GWGCWC	6 cut(s)	215, 351, 1020, 1457, 1764, 2718
BbvCI	CCTCAGC	1 cut(s)	132
BbvI	GCAGC	9 cut(s)	586, 589, 592, 595, 1863, 1978, 2421, 2437, 2507
BccI	CCATC	4 cut(s)	194, 751, 877, 1802
BceAI	ACGGC	9 cut(s)	259, 276, 397, 411, 1008, 1237, 1596, 1974, 2413
BcgI	CGANNNNNNTGC	2 cut(s)	1819, 1853
BciT130I	CCWGG	5 cut(s)	206, 675, 1181, 1328, 3014
BciVI	GTATCC	2 cut(s)	1396, 2851
BclI	TGATCA	2 cut(s)	147, 732
BfaI	CTAG	4 cut(s)	969, 1349, 2522, 2904
BfmI	CTRYAG	1 cut(s)	1983
BfoI	RGCGCY	4 cut(s)	222, 379, 569, 1819
BfuAI	ACCTGC	1 cut(s)	3147
BfuI	GTATCC	2 cut(s)	1396, 2851
BglI	GCCNNNNNGGC	2 cut(s)	619, 2545
BglII	AGATCT	1 cut(s)	1233
BlpI	GCTNAGC	3 cut(s)	1605, 1962, 2472
BmcAI	AGTACT	1 cut(s)	1037
BmeRI	GACNNNNNGTC	1 cut(s)	1252
BmeT110I	CYCGRG	7 cut(s)	305, 350, 485, 1610, 2402, 2462, 2964
BmgBI	CACGTC	3 cut(s)	1297, 1774, 2409
BmsI	GCATC	4 cut(s)	757, 1568, 1891, 2283
BmtI	GCTAGC	1 cut(s)	2525
BpiI	GAAGAC	2 cut(s)	1177, 1719
BplI	GAGNNNNNCTC	4 cut(s)	886, 918, 1690, 1722
BpmI	CTGGAG	5 cut(s)	199, 620, 2306, 2901, 3049
Bpu10I	CCTNAGC	1 cut(s)	132
Bpu1102I	GCTNAGC	3 cut(s)	1605, 1962, 2472
BsaAI	YACGTR	8 cut(s)	226, 1822, 1915, 1936, 2157, 2589, 2719, 3041
BsaHI	GRCGYC	2 cut(s)	566, 2226
BsaI	GGTCTC	4 cut(s)	633, 1302, 1620, 3153
BsaXI	ACNNNNNCTCC	6 cut(s)	32, 62, 1469, 1499, 1892, 1922
Bse118I	RCCGGY	6 cut(s)	724, 1300, 1978, 2805, 3172, 3216
Bse1I	ACTGG	4 cut(s)	1498, 1676, 1757, 2213
Bse3DI	GCAATG	1 cut(s)	1554
BseAI	TCCGGA	2 cut(s)	1585, 3192
BseBI	CCWGG	5 cut(s)	206, 675, 1181, 1328, 3014
BseGI	GGATG	7 cut(s)	748, 775, 811, 841, 1006, 2677, 2878
BseMI	GCAATG	1 cut(s)	1554
BseMII	CTCAG	9 cut(s)	146, 455, 544, 905, 1511, 1619, 1631, 2486, 2864
BseNI	ACTGG	4 cut(s)	1498, 1676, 1757, 2213
BsePI	GCGCGC	2 cut(s)	2013, 2015
BseRI	GAGGAG	4 cut(s)	359, 1371, 1754, 2900
BseSI	GKGCMC	3 cut(s)	1866, 2718, 3013
BseX3I	CGGCCG	1 cut(s)	418
BseXI	GCAGC	9 cut(s)	586, 589, 592, 595, 1863, 1978, 2421, 2437, 2507
BseYI	CCCAGC	2 cut(s)	1999, 2542
BsgI	GTGCAG	2 cut(s)	1960, 2161
Bsh1285I	CGRYCG	2 cut(s)	421, 909
BshNI	GGYRCC	2 cut(s)	565, 2742
BshTI	ACCGGT	2 cut(s)	2805, 3216
BsiEI	CGRYCG	2 cut(s)	421, 909
BsiHKAI	GWGCWC	6 cut(s)	215, 351, 1020, 1457, 1764, 2718
BsiHKCI	CYCGRG	7 cut(s)	305, 350, 485, 1610, 2402, 2462, 2964
BslFI	GGGAC	7 cut(s)	451, 693, 1308, 1459, 1486, 2317, 2744
BsmBI	CGTCTC	2 cut(s)	322, 2399
BsmFI	GGGAC	7 cut(s)	451, 693, 1308, 1459, 1486, 2317, 2744
BsmI	GAATGC	3 cut(s)	1884, 2448, 2958
Bso31I	GGTCTC	4 cut(s)	633, 1302, 1620, 3153
BsoBI	CYCGRG	7 cut(s)	305, 350, 485, 1610, 2402, 2462, 2964
Bsp120I	GGGCCC	2 cut(s)	1862, 3009
Bsp13I	TCCGGA	2 cut(s)	1585, 3192
Bsp1407I	TGTACA	1 cut(s)	2301
Bsp1720I	GCTNAGC	3 cut(s)	1605, 1962, 2472
Bsp68I	TCGCGA	1 cut(s)	1245
BspCNI	CTCAG	9 cut(s)	145, 454, 543, 904, 1512, 1618, 1630, 2485, 2863
BspEI	TCCGGA	2 cut(s)	1585, 3192
BspHI	TCATGA	1 cut(s)	703
BspMI	ACCTGC	1 cut(s)	3147
BspOI	GCTAGC	1 cut(s)	2525
BspQI	GCTCTTC	2 cut(s)	488, 2597
BspT107I	GGYRCC	2 cut(s)	565, 2742
BspTNI	GGTCTC	4 cut(s)	633, 1302, 1620, 3153
BsrBI	CCGCTC	2 cut(s)	304, 3007
BsrDI	GCAATG	1 cut(s)	1554
BsrFI	RCCGGY	6 cut(s)	724, 1300, 1978, 2805, 3172, 3216
BsrGI	TGTACA	1 cut(s)	2301
BsrI	ACTGG	4 cut(s)	1498, 1676, 1757, 2213
BssAI	RCCGGY	6 cut(s)	724, 1300, 1978, 2805, 3172, 3216
BssHII	GCGCGC	2 cut(s)	2013, 2015
BssNI	GRCGYC	2 cut(s)	566, 2226
BssSI	CACGAG	2 cut(s)	1118, 1730
BssT1I	CCWWGG	2 cut(s)	1488, 2998
Bst2BI	CACGAG	2 cut(s)	1118, 1730
Bst2UI	CCWGG	5 cut(s)	206, 675, 1181, 1328, 3014
Bst6I	CTCTTC	3 cut(s)	456, 488, 2597
BstACI	GRCGYC	2 cut(s)	566, 2226
BstAPI	GCANNNNNTGC	1 cut(s)	2431
BstAUI	TGTACA	1 cut(s)	2301
BstBAI	YACGTR	8 cut(s)	226, 1822, 1915, 1936, 2157, 2589, 2719, 3041
BstDSI	CCRYGG	4 cut(s)	929, 1063, 1956, 2061
BstF5I	GGATG	7 cut(s)	748, 775, 811, 841, 1006, 2677, 2878
BstH2I	RGCGCY	4 cut(s)	222, 379, 569, 1819
BstMCI	CGRYCG	2 cut(s)	421, 909
BstNI	CCWGG	5 cut(s)	206, 675, 1181, 1328, 3014
BstNSI	RCATGY	2 cut(s)	2218, 2569
BstSFI	CTRYAG	1 cut(s)	1983
BstSLI	GKGCMC	3 cut(s)	1866, 2718, 3013
BstSNI	TACGTA	1 cut(s)	1822
BstV1I	GCAGC	9 cut(s)	586, 589, 592, 595, 1863, 1978, 2421, 2437, 2507
BstV2I	GAAGAC	2 cut(s)	1177, 1719
BstX2I	RGATCY	6 cut(s)	604, 670, 1233, 1366, 1753, 3034
BstXI	CCANNNNNNTGG	1 cut(s)	2506
BstYI	RGATCY	6 cut(s)	604, 670, 1233, 1366, 1753, 3034
BstZI	CGGCCG	1 cut(s)	418
BsuI	GTATCC	2 cut(s)	1396, 2851
BtgI	CCRYGG	4 cut(s)	929, 1063, 1956, 2061
BtrI	CACGTC	3 cut(s)	1297, 1774, 2409
BtsCI	GGATG	7 cut(s)	748, 775, 811, 841, 1006, 2677, 2878
BtsI	GCAGTG	2 cut(s)	1654, 1948
BtsIMutI	CAGTG	6 cut(s)	1654, 1669, 1764, 1948, 2187, 3078
BtuMI	TCGCGA	1 cut(s)	1245
BveI	ACCTGC	1 cut(s)	3147
CciI	TCATGA	1 cut(s)	703
Cfr10I	RCCGGY	6 cut(s)	724, 1300, 1978, 2805, 3172, 3216
Cfr42I	CCGCGG	1 cut(s)	932
Cfr9I	CCCGGG	1 cut(s)	2964
CpoI	CGGWCCG	6 cut(s)	1146, 1303, 2112, 2337, 2374, 3214
CseI	GACGC	6 cut(s)	185, 1442, 1469, 1815, 2075, 2582
CsiI	ACCWGGT	1 cut(s)	1179
CspAI	ACCGGT	2 cut(s)	2805, 3216
CspCI	CAANNNNNGTGG	2 cut(s)	1045, 1080
CspI	CGGWCCG	6 cut(s)	1146, 1303, 2112, 2337, 2374, 3214
CviAII	CATG	9 cut(s)	334, 704, 1449, 1645, 2215, 2506, 2517, 2566, 2596
DinI	GGCGCC	1 cut(s)	567
DraIII	CACNNNGTG	1 cut(s)	1120
DrdI	GACNNNNNNGTC	1 cut(s)	1301
DriI	GACNNNNNGTC	1 cut(s)	1252
DseDI	GACNNNNNNGTC	1 cut(s)	1301
EaeI	YGGCCR	7 cut(s)	202, 244, 261, 418, 1768, 2079, 2511
EagI	CGGCCG	1 cut(s)	418
Eam1104I	CTCTTC	3 cut(s)	456, 488, 2597
Eam1105I	GACNNNNNGTC	1 cut(s)	1252
EarI	CTCTTC	3 cut(s)	456, 488, 2597
Ecl136II	GAGCTC	4 cut(s)	213, 349, 1018, 1455
EclXI	CGGCCG	1 cut(s)	418
Eco105I	TACGTA	1 cut(s)	1822
Eco130I	CCWWGG	2 cut(s)	1488, 2998
Eco147I	AGGCCT	2 cut(s)	937, 2815
Eco24I	GRGCYC	9 cut(s)	215, 351, 531, 1020, 1088, 1457, 1866, 2935, 3013
Eco31I	GGTCTC	4 cut(s)	633, 1302, 1620, 3153
Eco32I	GATATC	1 cut(s)	1396
Eco47III	AGCGCT	3 cut(s)	220, 377, 1817
Eco52I	CGGCCG	1 cut(s)	418
Eco53kI	GAGCTC	4 cut(s)	213, 349, 1018, 1455
Eco57I	CTGAAG	1 cut(s)	1464
Eco72I	CACGTG	6 cut(s)	1915, 1936, 2157, 2589, 2719, 3041
Eco88I	CYCGRG	7 cut(s)	305, 350, 485, 1610, 2402, 2462, 2964
EcoICRI	GAGCTC	4 cut(s)	213, 349, 1018, 1455
EcoO109I	RGGNCCY	7 cut(s)	277, 361, 1546, 1681, 1863, 2106, 3016
EcoRI	GAATTC	1 cut(s)	924
EcoRII	CCWGG	5 cut(s)	204, 673, 1179, 1326, 3012
EcoRV	GATATC	1 cut(s)	1396
EcoT14I	CCWWGG	2 cut(s)	1488, 2998
EcoT22I	ATGCAT	1 cut(s)	1884
EcoT38I	GRGCYC	9 cut(s)	215, 351, 531, 1020, 1088, 1457, 1866, 2935, 3013
EgeI	GGCGCC	1 cut(s)	567
EheI	GGCGCC	1 cut(s)	567
ErhI	CCWWGG	2 cut(s)	1488, 2998
Esp3I	CGTCTC	2 cut(s)	322, 2399
FaeI	CATG	9 cut(s)	337, 707, 1452, 1648, 2218, 2509, 2520, 2569, 2599
FalI	AAGNNNNNCTT	2 cut(s)	395, 427
FaqI	GGGAC	7 cut(s)	451, 693, 1308, 1459, 1486, 2317, 2744
FatI	CATG	9 cut(s)	333, 703, 1448, 1644, 2214, 2505, 2516, 2565, 2595
FauI	CCCGC	5 cut(s)	1631, 1853, 2142, 2483, 3000
FauNDI	CATATG	1 cut(s)	765
FbaI	TGATCA	2 cut(s)	147, 732
FblI	GTMKAC	2 cut(s)	945, 2865
FokI	GGATG	7 cut(s)	735, 762, 798, 828, 993, 2684, 2885
FriOI	GRGCYC	9 cut(s)	215, 351, 531, 1020, 1088, 1457, 1866, 2935, 3013
FspBI	CTAG	4 cut(s)	969, 1349, 2522, 2904
GsaI	CCCAGC	2 cut(s)	2003, 2546
GsuI	CTGGAG	5 cut(s)	199, 620, 2306, 2901, 3049
HaeII	RGCGCY	4 cut(s)	222, 379, 569, 1819
HgaI	GACGC	6 cut(s)	185, 1442, 1469, 1815, 2075, 2582
Hin1I	GRCGYC	2 cut(s)	566, 2226
Hin1II	CATG	9 cut(s)	337, 707, 1452, 1648, 2218, 2509, 2520, 2569, 2599
HincII	GTYRAC	3 cut(s)	946, 1578, 2866
HindII	GTYRAC	3 cut(s)	946, 1578, 2866
HpaI	GTTAAC	1 cut(s)	1578
HphI	GGTGA	8 cut(s)	157, 436, 727, 886, 1133, 1228, 1798, 2710
HpyAV	CCTTC	4 cut(s)	647, 701, 1346, 1841
Hsp92I	GRCGYC	2 cut(s)	566, 2226
Hsp92II	CATG	9 cut(s)	337, 707, 1452, 1648, 2218, 2509, 2520, 2569, 2599
KasI	GGCGCC	1 cut(s)	565
Kpn2I	TCCGGA	2 cut(s)	1585, 3192
KpnI	GGTACC	1 cut(s)	2746
KroI	GCCGGC	1 cut(s)	1978
KroNI	GCCGGC	1 cut(s)	1980
Ksp22I	TGATCA	2 cut(s)	147, 732
KspAI	GTTAAC	1 cut(s)	1578
KspI	CCGCGG	1 cut(s)	932
LguI	GCTCTTC	2 cut(s)	488, 2597
Lsp1109I	GCAGC	9 cut(s)	586, 589, 592, 595, 1863, 1978, 2421, 2437, 2507
LweI	GCATC	4 cut(s)	757, 1568, 1891, 2283
MabI	ACCWGGT	1 cut(s)	1179
MaeI	CTAG	4 cut(s)	969, 1349, 2522, 2904
MaeIII	GTNAC	6 cut(s)	539, 803, 1943, 2116, 2227, 2698
MauBI	CGCGCGCG	1 cut(s)	2015
MbiI	CCGCTC	2 cut(s)	304, 3007
MboII	GAAGA	8 cut(s)	473, 502, 505, 892, 1177, 1681, 1724, 2614
MflI	RGATCY	6 cut(s)	604, 670, 1233, 1366, 1753, 3034
MlsI	TGGCCA	2 cut(s)	204, 2081
MluCI	AATT	5 cut(s)	534, 924, 1262, 1779, 2614
MluI	ACGCGT	1 cut(s)	1434
MluNI	TGGCCA	2 cut(s)	204, 2081
Mly113I	GGCGCC	1 cut(s)	566
MlyI	GAGTC	9 cut(s)	433, 883, 1062, 1157, 1205, 1241, 1605, 1709, 2573
MmeI	TCCRAC	9 cut(s)	345, 488, 849, 1236, 1317, 1482, 2550, 2649, 3192
Mox20I	TGGCCA	2 cut(s)	204, 2081
Mph1103I	ATGCAT	1 cut(s)	1884
MroI	TCCGGA	2 cut(s)	1585, 3192
MroNI	GCCGGC	1 cut(s)	1978
MroXI	GAANNNNTTC	1 cut(s)	410
MscI	TGGCCA	2 cut(s)	204, 2081
MseI	TTAA	5 cut(s)	183, 1577, 2345, 2948, 3221
MslI	CAYNNNNRTG	5 cut(s)	1011, 1674, 1691, 2504, 3083
Msp20I	TGGCCA	2 cut(s)	204, 2081
MspA1I	CMGCKG	9 cut(s)	250, 390, 598, 931, 1843, 1854, 1969, 2542, 2828
Mva1269I	GAATGC	3 cut(s)	1884, 2448, 2958
MvaI	CCWGG	5 cut(s)	206, 675, 1181, 1328, 3014
NaeI	GCCGGC	1 cut(s)	1980
NarI	GGCGCC	1 cut(s)	566
NdeI	CATATG	1 cut(s)	765
NgoMIV	GCCGGC	1 cut(s)	1978
NheI	GCTAGC	1 cut(s)	2521
NlaIII	CATG	9 cut(s)	337, 707, 1452, 1648, 2218, 2509, 2520, 2569, 2599
NmeAIII	GCCGAG	4 cut(s)	396, 648, 1746, 1989
NmuCI	GTSAC	4 cut(s)	803, 1943, 2227, 2698
NruI	TCGCGA	1 cut(s)	1245
NsiI	ATGCAT	1 cut(s)	1884
NspI	RCATGY	2 cut(s)	2218, 2569
OliI	CACNNNNGTG	1 cut(s)	3083
PaeI	GCATGC	1 cut(s)	2218
PaeR7I	CTCGAG	3 cut(s)	305, 350, 485
PagI	TCATGA	1 cut(s)	703
PauI	GCGCGC	2 cut(s)	2013, 2015
PceI	AGGCCT	2 cut(s)	937, 2815
PciI	ACATGT	1 cut(s)	2565
PciSI	GCTCTTC	2 cut(s)	488, 2597
PcsI	WCGNNNNNNNCGW	9 cut(s)	303, 312, 318, 348, 1077, 1290, 1773, 1818, 1920
PctI	GAATGC	3 cut(s)	1884, 2448, 2958
PdiI	GCCGGC	1 cut(s)	1980
PdmI	GAANNNNTTC	1 cut(s)	410
PfeI	GAWTC	7 cut(s)	964, 1003, 1050, 1564, 1806, 2005, 2926
PfoI	TCCNGGA	1 cut(s)	2333
PinAI	ACCGGT	2 cut(s)	2805, 3216
Ple19I	CGATCG	1 cut(s)	909
PleI	GAGTC	9 cut(s)	433, 883, 1062, 1157, 1205, 1241, 1604, 1709, 2573
PluTI	GGCGCC	1 cut(s)	569
PmaCI	CACGTG	6 cut(s)	1915, 1936, 2157, 2589, 2719, 3041
PmlI	CACGTG	6 cut(s)	1915, 1936, 2157, 2589, 2719, 3041
PpsI	GAGTC	9 cut(s)	433, 883, 1062, 1157, 1205, 1241, 1604, 1709, 2573
Ppu21I	YACGTR	8 cut(s)	226, 1822, 1915, 1936, 2157, 2589, 2719, 3041
PpuMI	RGGWCCY	5 cut(s)	277, 361, 1546, 1681, 2106
PscI	ACATGT	1 cut(s)	2565
Psp124BI	GAGCTC	4 cut(s)	215, 351, 1020, 1457
Psp5II	RGGWCCY	5 cut(s)	277, 361, 1546, 1681, 2106
Psp6I	CCWGG	5 cut(s)	204, 673, 1179, 1326, 3012
PspCI	CACGTG	6 cut(s)	1915, 1936, 2157, 2589, 2719, 3041
PspFI	CCCAGC	2 cut(s)	1999, 2542
PspGI	CCWGG	5 cut(s)	204, 673, 1179, 1326, 3012
PspOMI	GGGCCC	2 cut(s)	1862, 3009
PspPPI	RGGWCCY	5 cut(s)	277, 361, 1546, 1681, 2106
PspXI	VCTCGAGB	1 cut(s)	305
PsrI	GAACNNNNNNTAC	4 cut(s)	2135, 2167, 2792, 2824
PsuI	RGATCY	6 cut(s)	604, 670, 1233, 1366, 1753, 3034
PteI	GCGCGC	2 cut(s)	2013, 2015
PvuI	CGATCG	1 cut(s)	909
PvuII	CAGCTG	2 cut(s)	1969, 2828
RruI	TCGCGA	1 cut(s)	1245
RseI	CAYNNNNRTG	5 cut(s)	1011, 1674, 1691, 2504, 3083
Rsr2I	CGGWCCG	6 cut(s)	1146, 1303, 2112, 2337, 2374, 3214
RsrII	CGGWCCG	6 cut(s)	1146, 1303, 2112, 2337, 2374, 3214
SacI	GAGCTC	4 cut(s)	215, 351, 1020, 1457
SacII	CCGCGG	1 cut(s)	932
SalI	GTCGAC	2 cut(s)	944, 2864
SapI	GCTCTTC	2 cut(s)	488, 2597
SaqAI	TTAA	5 cut(s)	183, 1577, 2345, 2948, 3221
ScaI	AGTACT	1 cut(s)	1037
SchI	GAGTC	9 cut(s)	433, 883, 1062, 1157, 1205, 1241, 1605, 1709, 2573
SexAI	ACCWGGT	1 cut(s)	1179
SfaNI	GCATC	4 cut(s)	757, 1568, 1891, 2283
SfcI	CTRYAG	1 cut(s)	1983
SfoI	GGCGCC	1 cut(s)	567
Sfr274I	CTCGAG	3 cut(s)	305, 350, 485
Sfr303I	CCGCGG	1 cut(s)	932
SgrAI	CRCCGGYG	1 cut(s)	3172
SgrBI	CCGCGG	1 cut(s)	932
SlaI	CTCGAG	3 cut(s)	305, 350, 485
SmaI	CCCGGG	1 cut(s)	2966
SmiMI	CAYNNNNRTG	5 cut(s)	1011, 1674, 1691, 2504, 3083
SmlI	CTYRAG	3 cut(s)	305, 350, 485
SmoI	CTYRAG	3 cut(s)	305, 350, 485
SnaBI	TACGTA	1 cut(s)	1822
SphI	GCATGC	1 cut(s)	2218
Sse9I	AATT	5 cut(s)	534, 924, 1262, 1779, 2614
SseBI	AGGCCT	2 cut(s)	937, 2815
SspDI	GGCGCC	1 cut(s)	565
SspMI	CTAG	4 cut(s)	969, 1349, 2522, 2904
SstI	GAGCTC	4 cut(s)	215, 351, 1020, 1457
StuI	AGGCCT	2 cut(s)	937, 2815
StyI	CCWWGG	2 cut(s)	1488, 2998
TaqII	GACCGA	1 cut(s)	2958
TasI	AATT	5 cut(s)	534, 924, 1262, 1779, 2614
TatI	WGTACW	3 cut(s)	1035, 2151, 2301
TfiI	GAWTC	7 cut(s)	964, 1003, 1050, 1564, 1806, 2005, 2926
Tru1I	TTAA	5 cut(s)	183, 1577, 2345, 2948, 3221
Tru9I	TTAA	5 cut(s)	183, 1577, 2345, 2948, 3221
TscAI	CASTG	6 cut(s)	1661, 1676, 1764, 1948, 2194, 3085
TseFI	GTSAC	4 cut(s)	803, 1943, 2227, 2698
TseI	GCWGC	9 cut(s)	574, 577, 580, 583, 1851, 1966, 2425, 2434, 2495
Tsp45I	GTSAC	4 cut(s)	803, 1943, 2227, 2698
TspGWI	ACGGA	9 cut(s)	822, 1091, 1175, 1228, 1563, 2078, 2135, 2240, 2695
TspMI	CCCGGG	1 cut(s)	2964
TspRI	CASTG	6 cut(s)	1661, 1676, 1764, 1948, 2194, 3085
VneI	GTGCAC	1 cut(s)	2714
XapI	RAATTY	2 cut(s)	534, 924
XceI	RCATGY	2 cut(s)	2218, 2569
XcmI	CCANNNNNNNNNTGG	2 cut(s)	223, 2506
XhoI	CTCGAG	3 cut(s)	305, 350, 485
XmaI	CCCGGG	1 cut(s)	2964
XmiI	GTMKAC	2 cut(s)	945, 2865
XmnI	GAANNNNTTC	1 cut(s)	410
XspI	CTAG	4 cut(s)	969, 1349, 2522, 2904
ZraI	GACGTC	1 cut(s)	2227
ZrmI	AGTACT	1 cut(s)	1037
Zsp2I	ATGCAT	1 cut(s)	1884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.