FvH4_5g19540

E3 ubiquitin-protein ligase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
11359829 .. 11367439
7611 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g19540.t4

Sequence Viewer

Length: 2904 bp
ATGGATAGGAGATTCAACGGCCCAACTGGACCTTCCAGCTCCGTCAACGGCGGCACAGCCACAAGATCTGTTTCCCAGACTCCGCAACCTAACTACAGTAGTCTAGCCGTTCAGGAAGCATTGGAACATTTGGCGTCAATTGATCTGAGTGAGCTGTGTAATGAGGCTAAAGTTGAGCACTGTCGGGCAACAAGAGACTTGAGAAGCTGCGGACGTTATGTAATGGATGTGTTGTACTCGTGTGGACATGCTTCGTTATGTGCAGAGTGTAGCCAGCGGTGTGATGTTTGCCCAATTTGTAGAATTCCTATTCTAAATAATGGCCCAAGGCTACGTCGCCGCCTTTACGATCAATGTTTAGAAGCCCGCCTTATATCTAAAAGAAGTGATAAGAGATTTCAAGAGAAAGAGGATGGGGAGGAGCCTATAACTAATGACGTTCTGCGCCTTTATTCTTTGTTTGATGTTGCCCTGGAGAATAACTTAGCGTCATTGATATGCCACTATGTTACAGATGTTTGTTTGGATGAAAGTGCTGTGTCCAGTGATCCTGTTATTGCCTTTTTGTTGGATGAGGTGGTTGTTAAGGATTGGTGTAAGCGAGCATTCCAGAACATCATCACAGAACTTCAAGTGATTTATAATCTTGAAGCAGAACAAATGAAAACTATGTTGGGCCTACTTCTTAAGTTCTCAGCACAGTTGGCCGGCATATCTAATGTTCTCGAAGTTTTGGATTCATCTTTTAAGGGGTCTCTTTCATCGCAGCTTCACGACTTGCACCAACTTCTAGAAACCATATTAAAGACAAAGCAGCATATGGAGATTATGATGTGGTGCATACGGCATGAGTTCCTTGAGAATGTGAAGCCTTGTCATACTGAAATCATGACATGGCGTACTCTTGTTCGTGAAAGGAGATCAGCTGCAGTAATGCGTTCATGGCCTGATGCATTAAACAACTCTGAAGAGTCCACTGGACAGGAAGGTTCCCTTTTCATTGAAGATGCTTTAACAAATCTTGAGACAGAGCAAGGAAATACAATGGTAGAGGAATTGAAACTTGCATTTGCACAGAAGGATGGTCGTTCATCTGTTTACAGGTCTAAGATCGAAGGCATTAGAGGTTGTTATCCGTTTGAAAATGTTCGAGCTGCTGTTGATATACTTTTTCTACGTGGTAATTCAGATTTGGTTGTTGCAAAGCAAGCAACTTTTCTATATTATCTATATGATCGGCATTGGACGCTGCCTGATGATGACTGGAGACACATTCTAGAGGATTTCGGAGCCACCTTTGGTATCTCGAGGCATTTATTACTTGAATCCTTAATATTTTATCTCTTGGATGATCACACAAATGAGGCTCTGCAGGAAGCTTGTCACCTACTTCCAGAGATCTCAGGCCCAGCAACTCATCCTAAGATTGCACAAGTACTATTAGAAAGGGGAAATCCTGATACTGCTCTTTCGGTGTTACGGTGGTCAGGGCGTGATGGTACTTCAAAGTCCGTTTCACTTAGTGAGGCTGTAACTGCAGTTCGGGTGAGGGTAGAGTGTGGACTCTTTACTGAAGCATTTATACATCAAAGAATGCTGTGCACCAAAGTCAAGGAGAAGAAGTTGAAGATTGGTCAATTAGGGGGTGTCACTGATGATTCAAACGACAGATATAAGTGGGAGGACTGGGTGGAGATATTGGTTTCTGAAATTTGTTTCCTTTGTATTCGACGGAACATGGTGGATAGAATGATAGAGTTACCTTGGAACTCCAATGAAGAGAAACATCTTCACAAGTGTCTGTTAGATTATGCTATTGGTGATTCTTCCTCAACTATTGGAAGCCTTCTTGTGGTATTTTATATCCAGCGCTACCGGTATTCTGAAGCTTACCAAGTTGATCAAATACTTCAAAACTTGGAGCAGGAGTTCATCTCAAAGAATTCTGTCAGTGAAGATGATTTATCTAGAATGAAATCAGTGAGTCGCTGGAGAGCAGGGTTAATTGATAAATGCATGGACTTGCTGCCAGAAGTTCAACGCCAACAAGTGAAGGATGGAAAAGTGCCTGAGATAGCGGTCACCACCTCTAGTGGTGTTGAAATGTTAGAAACATCTTCTATTCCCGAGGTTCAAGAATCAAAGTCGACTAGTTTACTGATTCCTTCGTCCATTGATTCTTCTGTTCCACTGTGGACGGATCATAAGTATCCTTCCTGGAAACCAGCAATATCTGAAACCCCCCAAAAAAGAGGAGGATTGGTTGGCAGTTATCGGTCTGAACTTGGAAACTTTAGTTCTTCAGTTTTGCACCAAGGGTTATCTACCAATTCTGAAACAAGATTGAAGGCTGACATTAGTCTAAACAAGACTTTCAATTTTGATGACGCATCAACTCCCCTTGGTCATCGAGTTAGTTCCCCCTCAGCAGCTAGGGACATGAACAGAAGTTCATCAAAGTTATTTTCAAACAACCGTCCCCGCAACAATCAATACGGTACATTGTCACCAGAAATGGAACAGGATGTGTTTCTTACTCCATTCCAAACATTCCAAAATACAAGTCCTTCACACTACCAAAGGGTTACTACAAATCCAGTAACTACAAGCAGCTGCAACAATTGCTTATTTGAAGATTCCTCAAAGAACCTATATCCAAATTTGTCTAGTAAGGGTTTCCTATCAGATAGGGATGTTAGACCTTGGCATACAGCTTCCAAGGAGGATCCAATGGACACATCCATGAGCTATGGAGGTGAGGACAAAATTCTGAACAATGGAGTAAGATGGAGGTCCGATGAAACTAGTGACGAGGAAGAGGAGCAGAGTCAAGAGGATACCTTTGGGATTATTATTCATACTCCTACCAAAAGAGGACGTAGAAGCAGGTTTTCGAGGAGATGA

Protein Analysis

968

Amino Acids

109.65

Weight (kDa)

5.58

Isoelectric Point (pI)

55.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELYS PF13934 365 - 636 5.4e-38 Nuclear pore complex assembly
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 642
Acc36I ACCTGC 1 cut(s) 2877
AccI GTMKAC 1 cut(s) 2147
AciI CCGC 8 cut(s) 51, 83, 210, 277, 340, 367, 2078, 2482
AclWI GGATC 4 cut(s) 542, 2208, 2720, 2733
AcoI YGGCCR 1 cut(s) 705
AcsI RAATTY 5 cut(s) 303, 1710, 1942, 2659, 2766
AcuI CTGAAG 4 cut(s) 987, 1593, 1905, 2286
AcyI GRCGYC 1 cut(s) 134
AdeI CACNNNGTG 1 cut(s) 1523
AfaI GTAC 5 cut(s) 236, 901, 1437, 1501, 2500
AfeI AGCGCT 1 cut(s) 1871
AfiI CCNNNNNNNGG 1 cut(s) 1852
AflII CTTAAG 1 cut(s) 686
AgeI ACCGGT 1 cut(s) 1875
AhlI ACTAGT 2 cut(s) 2150, 2804
AjnI CCWGG 2 cut(s) 471, 2216
AjuI GAANNNNNNNTTGG 4 cut(s) 16, 48, 656, 688
AloI GAACNNNNNNTCC 2 cut(s) 1913, 1945
Alw21I GWGCWC 2 cut(s) 180, 1604
Alw26I GTCTC 4 cut(s) 189, 759, 1019, 1261
Alw44I GTGCAC 1 cut(s) 1600
AlwI GGATC 4 cut(s) 542, 2208, 2720, 2733
Ama87I CYCGRG 2 cut(s) 1306, 2126
Aor51HI AGCGCT 1 cut(s) 1871
AoxI GGCC 6 cut(s) 19, 322, 676, 705, 944, 1405
ApaLI GTGCAC 1 cut(s) 1600
ApoI RAATTY 5 cut(s) 303, 1710, 1942, 2659, 2766
ArsI GACNNNNNNTTYG 2 cut(s) 2548, 2580
AsiGI ACCGGT 1 cut(s) 1875
Asp700I GAANNNNTTC 1 cut(s) 1146
AspLEI GCGC 2 cut(s) 447, 1872
AspS9I GGNCC 6 cut(s) 20, 29, 323, 676, 1406, 2793
AsuHPI GGTGA 6 cut(s) 1376, 1558, 1832, 2074, 2499, 2768
AvaI CYCGRG 2 cut(s) 1306, 2126
AvaII GGWCC 2 cut(s) 29, 2793
BaeGI GKGCMC 1 cut(s) 1604
BamHI GGATCC 1 cut(s) 2725
BarI GAAGNNNNNNTAC 2 cut(s) 1566, 1598
BauI CACGAG 1 cut(s) 238
Bbv12I GWGCWC 2 cut(s) 180, 1604
BbvCI CCTCAGC 1 cut(s) 2425
BccI CCATC 5 cut(s) 407, 1076, 1490, 2051, 2781
BceAI ACGGC 4 cut(s) 34, 64, 92, 860
BciT130I CCWGG 2 cut(s) 473, 2218
BciVI GTATCC 2 cut(s) 2220, 2830
BclI TGATCA 2 cut(s) 1351, 1900
BcoDI GTCTC 4 cut(s) 189, 759, 1019, 1261
BcuI ACTAGT 2 cut(s) 2150, 2804
BfaI CTAG 9 cut(s) 104, 791, 1277, 1968, 2091, 2151, 2433, 2667, 2805
BfmI CTRYAG 4 cut(s) 94, 927, 1370, 1536
BfoI RGCGCY 1 cut(s) 1873
BfrI CTTAAG 1 cut(s) 686
BfuAI ACCTGC 1 cut(s) 2877
BfuI GTATCC 2 cut(s) 2220, 2830
BglII AGATCT 2 cut(s) 65, 1398
BmcAI AGTACT 1 cut(s) 1437
Bme1390I CCNGG 2 cut(s) 473, 2218
Bme18I GGWCC 2 cut(s) 29, 2793
BmeT110I CYCGRG 2 cut(s) 1306, 2126
BmgT120I GGNCC 6 cut(s) 20, 29, 323, 676, 1406, 2793
BmiI GGNNCC 4 cut(s) 423, 991, 1291, 2727
BmrFI CCNGG 2 cut(s) 473, 2218
BmrI ACTGGG 1 cut(s) 1696
BmsI GCATC 3 cut(s) 940, 997, 2399
BmuI ACTGGG 1 cut(s) 1696
BoxI GACNNNNGTC 1 cut(s) 2358
BplI GAGNNNNNCTC 2 cut(s) 1919, 1951
BpmI CTGGAG 3 cut(s) 494, 1285, 2011
Bpu10I CCTNAGC 1 cut(s) 2425
BpuEI CTTGAG 3 cut(s) 220, 878, 1043
BsaAI YACGTR 1 cut(s) 1178
BsaHI GRCGYC 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 759
BsaJI CCNNGG 8 cut(s) 326, 471, 1763, 2127, 2314, 2401, 2702, 2718
BsaWI WCCGGW 1 cut(s) 1875
BsaXI ACNNNNNCTCC 6 cut(s) 1607, 1637, 1913, 1943, 2247, 2277
Bsc4I CCNNNNNNNGG 1 cut(s) 1852
Bse118I RCCGGY 2 cut(s) 707, 1875
Bse1I ACTGG 6 cut(s) 31, 543, 982, 1268, 1691, 2597
BseBI CCWGG 2 cut(s) 473, 2218
BseDI CCNNGG 8 cut(s) 326, 471, 1763, 2127, 2314, 2401, 2702, 2718
BseLI CCNNNNNNNGG 1 cut(s) 1852
BseMII CTCAG 5 cut(s) 137, 708, 1416, 2061, 2439
BseNI ACTGG 6 cut(s) 31, 543, 982, 1268, 1691, 2597
BseRI GAGGAG 3 cut(s) 434, 2268, 2834
BseSI GKGCMC 1 cut(s) 1604
BseYI CCCAGC 1 cut(s) 1408
BsgI GTGCAG 1 cut(s) 282
BshFI GGCC 6 cut(s) 21, 324, 678, 707, 946, 1407
BshTI ACCGGT 1 cut(s) 1875
BsiHKAI GWGCWC 2 cut(s) 180, 1604
BsiHKCI CYCGRG 2 cut(s) 1306, 2126
BsiSI CCGG 2 cut(s) 708, 1876
BslFI GGGAC 2 cut(s) 2450, 2463
BslI CCNNNNNNNGG 1 cut(s) 1852
BsmAI GTCTC 4 cut(s) 189, 759, 1019, 1261
BsmFI GGGAC 2 cut(s) 2450, 2463
BsmI GAATGC 2 cut(s) 605, 1599
BsnI GGCC 6 cut(s) 21, 324, 678, 707, 946, 1407
Bso31I GGTCTC 1 cut(s) 759
BsoBI CYCGRG 2 cut(s) 1306, 2126
Bsp1286I GDGCHC 2 cut(s) 180, 1604
BspACI CCGC 8 cut(s) 51, 83, 210, 277, 340, 367, 2078, 2482
BspANI GGCC 6 cut(s) 21, 324, 678, 707, 946, 1407
BspCNI CTCAG 5 cut(s) 138, 707, 1415, 2062, 2438
BspHI TCATGA 1 cut(s) 888
BspLI GGNNCC 4 cut(s) 423, 991, 1291, 2727
BspMAI CTGCAG 3 cut(s) 931, 1374, 1540
BspMI ACCTGC 1 cut(s) 2877
BspPI GGATC 4 cut(s) 542, 2208, 2720, 2733
BspTI CTTAAG 1 cut(s) 686
BspTNI GGTCTC 1 cut(s) 759
BsrFI RCCGGY 2 cut(s) 707, 1875
BsrI ACTGG 6 cut(s) 31, 543, 982, 1268, 1691, 2597
BssAI RCCGGY 2 cut(s) 707, 1875
BssECI CCNNGG 8 cut(s) 326, 471, 1763, 2127, 2314, 2401, 2702, 2718
BssNI GRCGYC 1 cut(s) 134
BssSI CACGAG 1 cut(s) 238
BssT1I CCWWGG 6 cut(s) 326, 1763, 2314, 2401, 2702, 2718
Bst2BI CACGAG 1 cut(s) 238
Bst2UI CCWGG 2 cut(s) 473, 2218
Bst4CI ACNGT 7 cut(s) 98, 182, 702, 1482, 2193, 2477, 2498
Bst6I CTCTTC 3 cut(s) 963, 1773, 2811
BstACI GRCGYC 1 cut(s) 134
BstAFI CTTAAG 1 cut(s) 686
BstAPI GCANNNNNTGC 1 cut(s) 2622
BstBAI YACGTR 1 cut(s) 1178
BstC8I GCNNGC 5 cut(s) 275, 367, 603, 709, 1209
BstDEI CTNAG 9 cut(s) 146, 484, 694, 1107, 1402, 1422, 1520, 2070, 2425
BstEII GGTNACC 1 cut(s) 2080
BstH2I RGCGCY 1 cut(s) 1873
BstHHI GCGC 2 cut(s) 447, 1872
BstMAI GTCTC 4 cut(s) 189, 759, 1019, 1261
BstMWI GCNNNNNNNGC 6 cut(s) 704, 943, 1208, 1246, 1535, 2622
BstNI CCWGG 2 cut(s) 473, 2218
BstNSI RCATGY 1 cut(s) 251
BstPAI GACNNNNGTC 1 cut(s) 2358
BstPI GGTNACC 1 cut(s) 2080
BstSCI CCNGG 2 cut(s) 471, 2216
BstSFI CTRYAG 4 cut(s) 94, 927, 1370, 1536
BstSLI GKGCMC 1 cut(s) 1604
BstX2I RGATCY 3 cut(s) 65, 1398, 2725
BstYI RGATCY 3 cut(s) 65, 1398, 2725
BsuI GTATCC 2 cut(s) 2220, 2830
BsuRI GGCC 6 cut(s) 21, 324, 678, 707, 946, 1407
BtgZI GCGATG 1 cut(s) 747
BtsIMutI CAGTG 7 cut(s) 178, 550, 975, 1650, 1957, 1986, 2189
BveI ACCTGC 1 cut(s) 2877
Cac8I GCNNGC 5 cut(s) 275, 367, 603, 709, 1209
CciI TCATGA 1 cut(s) 888
CfoI GCGC 2 cut(s) 447, 1872
Cfr10I RCCGGY 2 cut(s) 707, 1875
Cfr13I GGNCC 6 cut(s) 20, 29, 323, 676, 1406, 2793
CseI GACGC 4 cut(s) 123, 477, 1255, 2396
Csp6I GTAC 5 cut(s) 235, 900, 1436, 1500, 2499
CspAI ACCGGT 1 cut(s) 1875
CviAII CATG 9 cut(s) 248, 848, 889, 894, 942, 1738, 2017, 2440, 2743
CviQI GTAC 5 cut(s) 235, 900, 1436, 1500, 2499
DdeI CTNAG 9 cut(s) 146, 484, 694, 1107, 1402, 1422, 1520, 2070, 2425
DraIII CACNNNGTG 1 cut(s) 1523
EaeI YGGCCR 1 cut(s) 705
Eam1104I CTCTTC 3 cut(s) 963, 1773, 2811
EarI CTCTTC 3 cut(s) 963, 1773, 2811
Eco130I CCWWGG 6 cut(s) 326, 1763, 2314, 2401, 2702, 2718
Eco31I GGTCTC 1 cut(s) 759
Eco47I GGWCC 2 cut(s) 29, 2793
Eco47III AGCGCT 1 cut(s) 1871
Eco57I CTGAAG 4 cut(s) 987, 1593, 1905, 2286
Eco88I CYCGRG 2 cut(s) 1306, 2126
Eco91I GGTNACC 1 cut(s) 2080
EcoO65I GGTNACC 1 cut(s) 2080
EcoRI GAATTC 2 cut(s) 303, 1942
EcoRII CCWGG 2 cut(s) 471, 2216
EcoT14I CCWWGG 6 cut(s) 326, 1763, 2314, 2401, 2702, 2718
EcoT22I ATGCAT 2 cut(s) 955, 2018
ErhI CCWWGG 6 cut(s) 326, 1763, 2314, 2401, 2702, 2718
FaeI CATG 9 cut(s) 251, 851, 892, 897, 945, 1741, 2020, 2443, 2746
FalI AAGNNNNNCTT 4 cut(s) 354, 386, 978, 1010
FaqI GGGAC 2 cut(s) 2450, 2463
FatI CATG 9 cut(s) 247, 847, 888, 893, 941, 1737, 2016, 2439, 2742
FauI CCCGC 2 cut(s) 374, 2489
FauNDI CATATG 1 cut(s) 819
FbaI TGATCA 2 cut(s) 1351, 1900
FblI GTMKAC 1 cut(s) 2147
FspBI CTAG 9 cut(s) 104, 791, 1277, 1968, 2091, 2151, 2433, 2667, 2805
GlaI GCGC 2 cut(s) 446, 1871
GsaI CCCAGC 1 cut(s) 1412
GsuI CTGGAG 3 cut(s) 494, 1285, 2011
HaeII RGCGCY 1 cut(s) 1873
HaeIII GGCC 6 cut(s) 21, 324, 678, 707, 946, 1407
HapII CCGG 2 cut(s) 708, 1876
HgaI GACGC 4 cut(s) 123, 477, 1255, 2396
HhaI GCGC 2 cut(s) 447, 1872
Hin1I GRCGYC 1 cut(s) 134
Hin1II CATG 9 cut(s) 251, 851, 892, 897, 945, 1741, 2020, 2443, 2746
Hin6I GCGC 2 cut(s) 445, 1870
HinP1I GCGC 2 cut(s) 445, 1870
HincII GTYRAC 2 cut(s) 46, 2148
HindII GTYRAC 2 cut(s) 46, 2148
HindIII AAGCTT 2 cut(s) 1377, 1887
HpaII CCGG 2 cut(s) 708, 1876
HphI GGTGA 6 cut(s) 1376, 1558, 1832, 2074, 2499, 2768
Hpy166II GTNNAC 9 cut(s) 46, 245, 975, 1099, 1562, 1602, 2148, 2156, 2196
Hpy8I GTNNAC 9 cut(s) 46, 245, 975, 1099, 1562, 1602, 2148, 2156, 2196
Hpy99I CGWCG 2 cut(s) 339, 1734
HpyCH4III ACNGT 7 cut(s) 98, 182, 702, 1482, 2193, 2477, 2498
HpyCH4IV ACGT 5 cut(s) 214, 334, 438, 1177, 2878
HpyF10VI GCNNNNNNNGC 6 cut(s) 704, 943, 1208, 1246, 1535, 2622
HpyF3I CTNAG 9 cut(s) 146, 484, 694, 1107, 1402, 1422, 1520, 2070, 2425
HpySE526I ACGT 5 cut(s) 214, 334, 438, 1177, 2878
Hsp92I GRCGYC 1 cut(s) 134
Hsp92II CATG 9 cut(s) 251, 851, 892, 897, 945, 1741, 2020, 2443, 2746
HspAI GCGC 2 cut(s) 445, 1870
KroI GCCGGC 1 cut(s) 707
KroNI GCCGGC 1 cut(s) 709
Ksp22I TGATCA 2 cut(s) 1351, 1900
LmnI GCTCC 5 cut(s) 44, 421, 1289, 1921, 2821
LweI GCATC 3 cut(s) 940, 997, 2399
MaeI CTAG 9 cut(s) 104, 791, 1277, 1968, 2091, 2151, 2433, 2667, 2805
MaeII ACGT 5 cut(s) 214, 334, 438, 1177, 2878
MfeI CAATTG 2 cut(s) 138, 2620
MflI RGATCY 3 cut(s) 65, 1398, 2725
MhlI GDGCHC 2 cut(s) 180, 1604
MlyI GAGTC 5 cut(s) 73, 980, 1557, 1993, 2836
MmeI TCCRAC 1 cut(s) 549
Mph1103I ATGCAT 2 cut(s) 955, 2018
MroNI GCCGGC 1 cut(s) 707
MroXI GAANNNNTTC 1 cut(s) 1146
MseI TTAA 8 cut(s) 585, 687, 747, 803, 956, 1013, 1331, 2003
MslI CAYNNNNRTG 3 cut(s) 496, 1359, 2741
MspA1I CMGCKG 3 cut(s) 277, 926, 2613
MspCI CTTAAG 1 cut(s) 686
MspI CCGG 2 cut(s) 708, 1876
MspR9I CCNGG 2 cut(s) 473, 2218
MunI CAATTG 2 cut(s) 138, 2620
Mva1269I GAATGC 2 cut(s) 605, 1599
MvaI CCWGG 2 cut(s) 473, 2218
MwoI GCNNNNNNNGC 6 cut(s) 704, 943, 1208, 1246, 1535, 2622
NaeI GCCGGC 1 cut(s) 709
NdeI CATATG 1 cut(s) 819
NgoMIV GCCGGC 1 cut(s) 707
NlaIII CATG 9 cut(s) 251, 851, 892, 897, 945, 1741, 2020, 2443, 2746
NlaIV GGNNCC 4 cut(s) 423, 991, 1291, 2727
NmuCI GTSAC 5 cut(s) 1382, 1648, 2080, 2505, 2807
NsiI ATGCAT 2 cut(s) 955, 2018
NspI RCATGY 1 cut(s) 251
PaeR7I CTCGAG 1 cut(s) 1306
PagI TCATGA 1 cut(s) 888
PctI GAATGC 2 cut(s) 605, 1599
PdiI GCCGGC 1 cut(s) 709
PdmI GAANNNNTTC 1 cut(s) 1146
PfeI GAWTC 9 cut(s) 12, 737, 1325, 1658, 1823, 2138, 2161, 2177, 2636
PfoI TCCNGGA 1 cut(s) 2216
PinAI ACCGGT 1 cut(s) 1875
PleI GAGTC 5 cut(s) 73, 979, 1557, 1992, 2835
PpsI GAGTC 5 cut(s) 73, 979, 1557, 1992, 2835
Ppu21I YACGTR 1 cut(s) 1178
PshAI GACNNNNGTC 1 cut(s) 2358
PsiI TTATAA 1 cut(s) 642
Psp6I CCWGG 2 cut(s) 471, 2216
PspEI GGTNACC 1 cut(s) 2080
PspFI CCCAGC 1 cut(s) 1408
PspGI CCWGG 2 cut(s) 471, 2216
PspN4I GGNNCC 4 cut(s) 423, 991, 1291, 2727
PspPI GGNCC 6 cut(s) 20, 29, 323, 676, 1406, 2793
PsrI GAACNNNNNNTAC 2 cut(s) 1524, 1556
PstI CTGCAG 3 cut(s) 931, 1374, 1540
PsuI RGATCY 3 cut(s) 65, 1398, 2725
PvuII CAGCTG 2 cut(s) 926, 2613
RsaI GTAC 5 cut(s) 236, 901, 1437, 1501, 2500
RsaNI GTAC 5 cut(s) 235, 900, 1436, 1500, 2499
RseI CAYNNNNRTG 3 cut(s) 496, 1359, 2741
SalI GTCGAC 1 cut(s) 2146
SaqAI TTAA 8 cut(s) 585, 687, 747, 803, 956, 1013, 1331, 2003
Sau96I GGNCC 6 cut(s) 20, 29, 323, 676, 1406, 2793
ScaI AGTACT 1 cut(s) 1437
SchI GAGTC 5 cut(s) 73, 980, 1557, 1993, 2836
ScrFI CCNGG 2 cut(s) 473, 2218
SduI GDGCHC 2 cut(s) 180, 1604
SfaNI GCATC 3 cut(s) 940, 997, 2399
SfcI CTRYAG 4 cut(s) 94, 927, 1370, 1536
Sfr274I CTCGAG 1 cut(s) 1306
SinI GGWCC 2 cut(s) 29, 2793
SlaI CTCGAG 1 cut(s) 1306
SmiMI CAYNNNNRTG 3 cut(s) 496, 1359, 2741
SmlI CTYRAG 5 cut(s) 199, 686, 857, 1022, 1306
SmoI CTYRAG 5 cut(s) 199, 686, 857, 1022, 1306
SpeI ACTAGT 2 cut(s) 2150, 2804
SsiI CCGC 8 cut(s) 51, 83, 210, 277, 340, 367, 2078, 2482
SspI AATATT 1 cut(s) 1335
SspMI CTAG 9 cut(s) 104, 791, 1277, 1968, 2091, 2151, 2433, 2667, 2805
StyD4I CCNGG 2 cut(s) 471, 2216
StyI CCWWGG 6 cut(s) 326, 1763, 2314, 2401, 2702, 2718
TaaI ACNGT 7 cut(s) 98, 182, 702, 1482, 2193, 2477, 2498
TaiI ACGT 5 cut(s) 217, 337, 441, 1180, 2881
TaqI TCGA 8 cut(s) 726, 1113, 1150, 1307, 1729, 2147, 2410, 2894
TaqII GACCGA 1 cut(s) 2265
TatI WGTACW 2 cut(s) 234, 1435
TauI GCSGC 2 cut(s) 54, 342
TfiI GAWTC 9 cut(s) 12, 737, 1325, 1658, 1823, 2138, 2161, 2177, 2636
Tru1I TTAA 8 cut(s) 585, 687, 747, 803, 956, 1013, 1331, 2003
Tru9I TTAA 8 cut(s) 585, 687, 747, 803, 956, 1013, 1331, 2003
TscAI CASTG 7 cut(s) 185, 550, 982, 1657, 1957, 1986, 2196
TseFI GTSAC 5 cut(s) 1382, 1648, 2080, 2505, 2807
Tsp45I GTSAC 5 cut(s) 1382, 1648, 2080, 2505, 2807
TspGWI ACGGA 5 cut(s) 31, 1125, 1501, 1747, 2213
TspRI CASTG 7 cut(s) 185, 550, 982, 1657, 1957, 1986, 2196
Vha464I CTTAAG 1 cut(s) 686
VneI GTGCAC 1 cut(s) 1600
VpaK11BI GGWCC 2 cut(s) 29, 2793
XapI RAATTY 5 cut(s) 303, 1710, 1942, 2659, 2766
XbaI TCTAGA 3 cut(s) 790, 1276, 1967
XceI RCATGY 1 cut(s) 251
XhoI CTCGAG 1 cut(s) 1306
XmiI GTMKAC 1 cut(s) 2147
XmnI GAANNNNTTC 1 cut(s) 1146
XspI CTAG 9 cut(s) 104, 791, 1277, 1968, 2091, 2151, 2433, 2667, 2805
ZrmI AGTACT 1 cut(s) 1437
Zsp2I ATGCAT 2 cut(s) 955, 2018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.