Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0008076

Physical Location & Seq

Genomic Coordinates Reverse (-)

8017657 .. 8024612

Gene Structure 6956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1060900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2919 bp

ATGGATAGGAGATTAAATGGACCAACTGGACCTTCGAGCTCCGTCAATGGCGGCCCAGCGACAAGATCTGGTTCTCATGCTCCGCAACCTAACTACAATAGTCGAGCTGTTCAGGAAGCATTGGAACAGTTGGCATCGATTGATCTGATTGACTTATGCAATGAATCTAAAGTTGAGTGCTGTCGGGCAACACGAGACTTGAGGAGTTGTGGACGACAAGTAAAGGATGTGCTCATCTCATGTGGACATGCTTCATTATGTGCAGAGTGTAGCCAGCGCTGTGATGTGTGTCCCATTTGTAGAATTCAAATACCAAAGAATGGCGCAAAATTATGCCGACGCCTTTATGATCAGTGTCTAGAAGCTCATCTTATACCCAAAAGATGTGATAAGAGTTTTCAAGAGAAAGAAGATGGGGAGGAGCAAATATCTGCTGATGTCCAACGCCTTTATTCTTTATTTGATATTGCCCTGGAGAATAACTTAGTTTCTTTGATATGCCACTATGTTACAGATGTTTGTTTGGATGAAAGTGCAGTATCCAGTGATCCCGTTATTGCTTTTTTGTTGGATGAAGTGGTTGTGAAGGATTGGTGCAAGCGAACATTCCAGAACATCATCACAGAACTTCAAGGCATTTATAATCTTGAAGCAGAACCGATGAAGTCTATGTTGAGTTTACTTCTTAAGTTCTCAGTACAGTTGGCTGGCATATCCAGTGTGATTGAAGTTTTGGATTCATCTTTTAAAGGGTCTTTTTCAGCTCAGCTTCATGACTTTCACCAGCTTCAAGAGAGCATATTAAAGACAAAGCAGCATATGGAGGTTATGATATGGTGTGTAAGACATGAGTTCCTTGAGAAAGTGAGGCCTCGTTATACTGATTTCTCATCATGGCATTCTCTTGTCCGCGAAAGGAAATATGCTGCAATTAAGCGTTCTTGGCCTGATTCAGTAAATAACTCTGAAGAGTCCAGTGGACAGGAAGGTACCCTATTTATTGAAGATGCCCTGGTAAATCTGGAGGTTGGGCAGGGAAATACAGAGAAATTGGTGGAGGGATTAAAACTAGGATCTTTGCAGAAGGATGGAGTTTCATCAGTTCTCAGGTCTAAGATAGAAGGGGTTGCAGGATGCTATCCATTTGAAAATGTTCGAGCTGCTGTTGATATACTTTTTCTATGTGGTAGTTCAGATTTGGTGGTTGCGAAGCAAGCTATTTTTCTATATTACCTATTTGATCGGCATTGGACAATGCCTGATGAGCAATGGAGGCACCTTCTAGATGATTTTGGAGCTACTTTTGGCATACCCAGGCAATTACTACTGGAATCCTTAATCTTTTATCTTTTGGATGATCACACAGATAAAGCTCTGCAGGAAGCTTGTCACCTTCTTCCAGAGATCTCTGGTCCAGCAACTCATCCTAAGATTGCACAAGTACTATTAGAAAGGGGTAATTCTGATACAGCTCTTTTGGTTATACGGTGGTCCGGGCGTGATGGTACATCAAAGTCGTCAATTTCACTTGGTGAGGCTGTTACTGCAGTTCGGGTGAGGGTAGAGTGTGGACTTTTCACCGAAGCATTTATACATCAAAGAATGCTGTGTACCAAAGTCAAGGAGAAGATGTTGAAGCTTGGAGAATTGGGGGATGCAACTGATGATTCAAAAAGCAAGTATGGGAGTTGGGAAGACTGGGTGGAGATATTGATCACTGAAATTTGTGTCCTCTGTATACGACGGAACATGGTAGACCGAGTGATAGAGTTGCCTTGGAACTCTGATGAAGAGAAACATCTCCACAAGTGCCTGTTAGATTATACTATTGATGATCCTTCCTCAACTATTGGAAGCCTTCTTGTCGTATTCTACATTCAGCGGTACCGGTACTCTGAAGCTTACCAAGTTGATCAAATACTTAAAAACCTGGAGGAGGAGTTCATTTCAAAGAATTCTGTCAGTGAAGAAGTTTTATCTCGAATGAGATCAATGAGCAGATGGAGAGCTGGATTAATTGATAAATGCATGGAGTTGCTACCAGAAGTCCAACGACAAGAAATAAAGTCGGGAAAGTTTCCTGAGGTAGCTGTTACCACCTCTAGTGAAGTTGAAACGGCAGCAGCATCACTTCCTGAAGTGCAAAAGTCACAATCAATTAGTATGCTGATTCCTTCATCCATTGATTCTTCTCTTGGTTTATGGTCGGATTGTGTGAATCCTTCCTGGAAACCGTCAATATCTGAAACACCGAAAAAAAGAGTTGGGTTGGTTGACAGTTATCGCTCTGAACTTGGTAACAATGGTTCAGTTCTTCATGAGAAGTTACTTAGCAATTCTGAAACACAATGGAAGCCTGATGATAGCATAAACAAGGCTTTCAACTTTGAAGATGCATCAACTCCTGGAATTCATTGGGCGACTCCCCCCTCATCCGTTAAGGACAGGAAAAAGAGTTCATCAAGAATACTTTCAAATAGCCGTCTCCAAGACAATCAATATGCTAAAATGTCACCCGAAACGGAACGGAACAAGCGGTTCAACCCATTCCAAAATACAAGTCCTTCGAACTTTTACAGCGCTGATTCTAATCCAGTAACTACACCCAGCAGCAACCATGGCCTGTTTAAAGATTCCGCAACAGACCTGCATCGGAGTGTGAACAGTAAGGGGTTCCAACGAGATAGGGACAATAGGACTTGGAATATGGCTTCCAAGGATGACCCAATGGACATTTCTTTGAGCTATGGAGAAAAGAGTCATGTGATTGAGGACGAAAACTTAAACAATGGACCGAGATGGAGGTCTGACGAAGCTAGTGACGAGGAAGAGGAGCAGAGTCCACAGAAAGCTATTGGGATCACTCGTCATGCTTCTACTGCGAGGGCATTACGAAGAACTAGATTTTCCAAGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0022414 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELYS

Protein Analysis

973

Amino Acids

109.62

Weight (kDa)

5.68

Isoelectric Point (pI)

53.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ELYS	PF13934	332 - 607	1.7e-38	Nuclear pore complex assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39810 AT2G39810
fragaria_vesca	FvH4_5g19540 FvH4_5g19540 FvH4_5g19540 FvH4_5g19540
malus_domestica	MD04G1060900.v1.1 MD06G1054200.v1.1
prunus_persica	Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1
pyrus_communis	pycom04g05480 pycom06g04560
rosa_chinensis	RchiOBHm_Chr7g0204151
rosa_laevigata	RLG00000003484
rosa_multiflora	Rmu_sc0001311.1_g000032
rosa_roxburghii	Rroxscaffold_3G00253300
rosa_rugosa	Rorug07G0081200
rosa_samantha	Rh7AG211100 Rh7BG209700 Rh7CG223600 Rh7DG217900
rosa_wichuraiana	Rw7G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	642
Acc36I	ACCTGC	1 cut(s)	2655
Acc65I	GGTACC	2 cut(s)	989, 1884
AccB1I	GGYRCC	3 cut(s)	989, 1275, 1884
AccB7I	CCANNNNNTGG	1 cut(s)	320
AccI	GTMKAC	2 cut(s)	1738, 1755
AccII	CGCG	1 cut(s)	912
AciI	CCGC	6 cut(s)	51, 83, 910, 1882, 2536, 2637
AclWI	GGATC	4 cut(s)	542, 1081, 1829, 2867
AcsI	RAATTY	4 cut(s)	303, 1722, 1954, 2409
AcuI	CTGAAG	3 cut(s)	987, 1917, 2157
AcyI	GRCGYC	1 cut(s)	340
AdeI	CACNNNGTG	1 cut(s)	1532
AfaI	GTAC	7 cut(s)	699, 991, 1443, 1507, 1612, 1886, 1892
AfeI	AGCGCT	2 cut(s)	278, 2581
AfiI	CCNNNNNNNGG	2 cut(s)	320, 1936
AflII	CTTAAG	1 cut(s)	686
AgeI	ACCGGT	1 cut(s)	1887
AjnI	CCWGG	6 cut(s)	471, 1011, 1313, 1929, 2225, 2404
AjuI	GAANNNNNNNTTGG	4 cut(s)	16, 48, 2719, 2751
AloI	GAACNNNNNNTCC	4 cut(s)	1925, 1957, 2440, 2472
Alw21I	GWGCWC	2 cut(s)	41, 234
Alw26I	GTCTC	2 cut(s)	189, 2489
AlwI	GGATC	4 cut(s)	542, 1081, 1829, 2867
Aor51HI	AGCGCT	2 cut(s)	278, 2581
AoxI	GGCC	4 cut(s)	52, 869, 944, 2620
ApeKI	GCWGC	6 cut(s)	814, 926, 1160, 2120, 2123, 2610
ApoI	RAATTY	4 cut(s)	303, 1722, 1954, 2409
ArsI	GACNNNNNNTTYG	2 cut(s)	2545, 2577
AseI	ATTAAT	1 cut(s)	2015
AsiGI	ACCGGT	1 cut(s)	1887
Asp700I	GAANNNNTTC	2 cut(s)	1152, 2470
Asp718I	GGTACC	2 cut(s)	989, 1884
AspLEI	GCGC	3 cut(s)	279, 326, 2582
AspS9I	GGNCC	6 cut(s)	20, 29, 53, 1412, 1491, 2792
AsuC2I	CCSGG	1 cut(s)	1495
AsuHPI	GGTGA	6 cut(s)	773, 1382, 1544, 1567, 1570, 2505
AsuII	TTCGAA	1 cut(s)	2567
AvaII	GGWCC	5 cut(s)	20, 29, 1412, 1491, 2792
AxyI	CCTNAGG	1 cut(s)	2082
BanI	GGYRCC	3 cut(s)	989, 1275, 1884
BanII	GRGCYC	1 cut(s)	41
BarI	GAAGNNNNNNTAC	2 cut(s)	1575, 1607
BauI	CACGAG	1 cut(s)	192
BbsI	GAAGAC	1 cut(s)	1701
Bbv12I	GWGCWC	2 cut(s)	41, 234
BbvI	GCAGC	6 cut(s)	826, 913, 1147, 2132, 2135, 2622
BccI	CCATC	5 cut(s)	407, 1082, 1496, 1995, 2793
BceAI	ACGGC	2 cut(s)	2133, 2466
BciT130I	CCWGG	6 cut(s)	473, 1013, 1315, 1931, 2227, 2406
BciVI	GTATCC	1 cut(s)	550
BclI	TGATCA	4 cut(s)	349, 1357, 1713, 1912
BcnI	CCSGG	1 cut(s)	1495
BcoDI	GTCTC	2 cut(s)	189, 2489
BfaI	CTAG	6 cut(s)	359, 1070, 1283, 2103, 2817, 2901
BfmI	CTRYAG	2 cut(s)	1376, 1545
BfoI	RGCGCY	2 cut(s)	280, 2583
BfrI	CTTAAG	1 cut(s)	686
BfuAI	ACCTGC	1 cut(s)	2655
BfuI	GTATCC	1 cut(s)	550
BglII	AGATCT	2 cut(s)	65, 1404
BisI	GCNGC	7 cut(s)	52, 815, 927, 1161, 2121, 2124, 2611
BlpI	GCTNAGC	1 cut(s)	765
BlsI	GCNGC	7 cut(s)	53, 816, 928, 1162, 2122, 2125, 2612
BmcAI	AGTACT	1 cut(s)	1443
Bme1390I	CCNGG	7 cut(s)	473, 1013, 1315, 1495, 1931, 2227, 2406
Bme18I	GGWCC	5 cut(s)	20, 29, 1412, 1491, 2792
BmgT120I	GGNCC	6 cut(s)	20, 29, 53, 1412, 1491, 2792
BmiI	GGNNCC	4 cut(s)	991, 1277, 1886, 2675
BmrFI	CCNGG	7 cut(s)	473, 1013, 1315, 1495, 1931, 2227, 2406
BmrI	ACTGGG	1 cut(s)	1708
BmsI	GCATC	8 cut(s)	143, 997, 1124, 1645, 2135, 2383, 2405, 2659
BmuI	ACTGGG	1 cut(s)	1708
BpiI	GAAGAC	1 cut(s)	1701
BpmI	CTGGAG	3 cut(s)	494, 1043, 1952
Bpu1102I	GCTNAGC	1 cut(s)	765
Bpu14I	TTCGAA	1 cut(s)	2567
BpuEI	CTTGAG	2 cut(s)	220, 878
BpuMI	CCSGG	1 cut(s)	1495
Bsa29I	ATCGAT	1 cut(s)	137
BsaBI	GATNNNNATC	2 cut(s)	1712, 2589
BsaHI	GRCGYC	1 cut(s)	340
BsaJI	CCNNGG	6 cut(s)	471, 1011, 1313, 1775, 2617, 2715
BsaWI	WCCGGW	1 cut(s)	1887
BsaXI	ACNNNNNCTCC	4 cut(s)	1616, 1646, 1925, 1955
Bsc4I	CCNNNNNNNGG	2 cut(s)	320, 1936
Bse118I	RCCGGY	1 cut(s)	1887
Bse1I	ACTGG	7 cut(s)	31, 543, 717, 975, 1332, 1703, 2594
Bse21I	CCTNAGG	1 cut(s)	2082
Bse3DI	GCAATG	2 cut(s)	166, 1274
Bse8I	GATNNNNATC	2 cut(s)	1712, 2589
BseBI	CCWGG	6 cut(s)	473, 1013, 1315, 1931, 2227, 2406
BseCI	ATCGAT	1 cut(s)	137
BseDI	CCNNGG	6 cut(s)	471, 1011, 1313, 1775, 2617, 2715
BseJI	GATNNNNATC	2 cut(s)	1712, 2589
BseLI	CCNNNNNNNGG	2 cut(s)	320, 1936
BseMI	GCAATG	2 cut(s)	166, 1274
BseMII	CTCAG	4 cut(s)	708, 779, 1120, 2073
BseNI	ACTGG	7 cut(s)	31, 543, 717, 975, 1332, 1703, 2594
BseRI	GAGGAG	5 cut(s)	217, 434, 1949, 1952, 2846
BseXI	GCAGC	6 cut(s)	826, 913, 1147, 2132, 2135, 2622
BseYI	CCCAGC	2 cut(s)	55, 2606
BsgI	GTGCAG	2 cut(s)	282, 555
Bsh1236I	CGCG	1 cut(s)	912
BshFI	GGCC	4 cut(s)	54, 871, 946, 2622
BshNI	GGYRCC	3 cut(s)	989, 1275, 1884
BshTI	ACCGGT	1 cut(s)	1887
BshVI	ATCGAT	1 cut(s)	137
BsiHKAI	GWGCWC	2 cut(s)	41, 234
BsiSI	CCGG	2 cut(s)	1494, 1888
BslFI	GGGAC	2 cut(s)	276, 2702
BslI	CCNNNNNNNGG	2 cut(s)	320, 1936
BsmAI	GTCTC	2 cut(s)	189, 2489
BsmBI	CGTCTC	1 cut(s)	2489
BsmFI	GGGAC	2 cut(s)	276, 2702
BsmI	GAATGC	2 cut(s)	898, 1608
BsnI	GGCC	4 cut(s)	54, 871, 946, 2622
Bsp119I	TTCGAA	1 cut(s)	2567
Bsp1286I	GDGCHC	2 cut(s)	41, 234
Bsp1720I	GCTNAGC	1 cut(s)	765
Bsp19I	CCATGG	1 cut(s)	2617
BspACI	CCGC	6 cut(s)	51, 83, 910, 1882, 2536, 2637
BspANI	GGCC	4 cut(s)	54, 871, 946, 2622
BspCNI	CTCAG	4 cut(s)	707, 778, 1119, 2074
BspDI	ATCGAT	1 cut(s)	137
BspFNI	CGCG	1 cut(s)	912
BspHI	TCATGA	2 cut(s)	772, 2317
BspLI	GGNNCC	4 cut(s)	991, 1277, 1886, 2675
BspMAI	CTGCAG	2 cut(s)	1380, 1549
BspMI	ACCTGC	1 cut(s)	2655
BspPI	GGATC	4 cut(s)	542, 1081, 1829, 2867
BspT104I	TTCGAA	1 cut(s)	2567
BspT107I	GGYRCC	3 cut(s)	989, 1275, 1884
BspTI	CTTAAG	1 cut(s)	686
BsrDI	GCAATG	2 cut(s)	166, 1274
BsrFI	RCCGGY	1 cut(s)	1887
BsrI	ACTGG	7 cut(s)	31, 543, 717, 975, 1332, 1703, 2594
BssAI	RCCGGY	1 cut(s)	1887
BssECI	CCNNGG	6 cut(s)	471, 1011, 1313, 1775, 2617, 2715
BssNAI	GTATAC	1 cut(s)	1739
BssNI	GRCGYC	1 cut(s)	340
BssSI	CACGAG	1 cut(s)	192
BssT1I	CCWWGG	3 cut(s)	1775, 2617, 2715
Bst1107I	GTATAC	1 cut(s)	1739
Bst2BI	CACGAG	1 cut(s)	192
Bst2UI	CCWGG	6 cut(s)	473, 1013, 1315, 1931, 2227, 2406
Bst4CI	ACNGT	6 cut(s)	129, 702, 1488, 2235, 2279, 2666
Bst6I	CTCTTC	3 cut(s)	963, 1785, 2823
BstACI	GRCGYC	1 cut(s)	340
BstAFI	CTTAAG	1 cut(s)	686
BstBI	TTCGAA	1 cut(s)	2567
BstC8I	GCNNGC	4 cut(s)	275, 599, 709, 1215
BstDEI	CTNAG	8 cut(s)	484, 694, 765, 1106, 1113, 1428, 2082, 2330
BstDSI	CCRYGG	1 cut(s)	2617
BstENI	CCTNNNNNAGG	1 cut(s)	1934
BstFNI	CGCG	1 cut(s)	912
BstH2I	RGCGCY	2 cut(s)	280, 2583
BstHHI	GCGC	3 cut(s)	279, 326, 2582
BstMAI	GTCTC	2 cut(s)	189, 2489
BstMWI	GCNNNNNNNGC	7 cut(s)	943, 1214, 1264, 1273, 1544, 2619, 2879
BstNI	CCWGG	6 cut(s)	473, 1013, 1315, 1931, 2227, 2406
BstNSI	RCATGY	1 cut(s)	251
BstSCI	CCNGG	7 cut(s)	471, 1011, 1313, 1493, 1929, 2225, 2404
BstSFI	CTRYAG	2 cut(s)	1376, 1545
BstUI	CGCG	1 cut(s)	912
BstV1I	GCAGC	6 cut(s)	826, 913, 1147, 2132, 2135, 2622
BstV2I	GAAGAC	1 cut(s)	1701
BstX2I	RGATCY	3 cut(s)	65, 1073, 1404
BstYI	RGATCY	3 cut(s)	65, 1073, 1404
BstZ17I	GTATAC	1 cut(s)	1739
Bsu15I	ATCGAT	1 cut(s)	137
Bsu36I	CCTNAGG	1 cut(s)	2082
BsuI	GTATCC	1 cut(s)	550
BsuRI	GGCC	4 cut(s)	54, 871, 946, 2622
BsuTUI	ATCGAT	1 cut(s)	137
BtgI	CCRYGG	1 cut(s)	2617
BtsIMutI	CAGTG	6 cut(s)	359, 550, 724, 982, 1716, 1969
BveI	ACCTGC	1 cut(s)	2655
Cac8I	GCNNGC	4 cut(s)	275, 599, 709, 1215
CciI	TCATGA	2 cut(s)	772, 2317
CfoI	GCGC	3 cut(s)	279, 326, 2582
Cfr10I	RCCGGY	1 cut(s)	1887
Cfr13I	GGNCC	6 cut(s)	20, 29, 53, 1412, 1491, 2792
ClaI	ATCGAT	1 cut(s)	137
CseI	GACGC	1 cut(s)	348
Csp6I	GTAC	7 cut(s)	698, 990, 1442, 1506, 1611, 1885, 1891
CspAI	ACCGGT	1 cut(s)	1887
CviQI	GTAC	7 cut(s)	698, 990, 1442, 1506, 1611, 1885, 1891
DdeI	CTNAG	8 cut(s)	484, 694, 765, 1106, 1113, 1428, 2082, 2330
DraI	TTTAAA	2 cut(s)	748, 2629
DraIII	CACNNNGTG	1 cut(s)	1532
Eam1104I	CTCTTC	3 cut(s)	963, 1785, 2823
EarI	CTCTTC	3 cut(s)	963, 1785, 2823
Ecl136II	GAGCTC	1 cut(s)	39
Eco130I	CCWWGG	3 cut(s)	1775, 2617, 2715
Eco147I	AGGCCT	1 cut(s)	871
Eco24I	GRGCYC	1 cut(s)	41
Eco47I	GGWCC	5 cut(s)	20, 29, 1412, 1491, 2792
Eco47III	AGCGCT	2 cut(s)	278, 2581
Eco53kI	GAGCTC	1 cut(s)	39
Eco57I	CTGAAG	3 cut(s)	987, 1917, 2157
Eco81I	CCTNAGG	1 cut(s)	2082
EcoICRI	GAGCTC	1 cut(s)	39
EcoNI	CCTNNNNNAGG	1 cut(s)	1934
EcoRI	GAATTC	3 cut(s)	303, 1954, 2409
EcoRII	CCWGG	6 cut(s)	471, 1011, 1313, 1929, 2225, 2404
EcoT14I	CCWWGG	3 cut(s)	1775, 2617, 2715
EcoT22I	ATGCAT	2 cut(s)	2030, 2398
EcoT38I	GRGCYC	1 cut(s)	41
ErhI	CCWWGG	3 cut(s)	1775, 2617, 2715
Esp3I	CGTCTC	1 cut(s)	2489
FalI	AAGNNNNNCTT	2 cut(s)	354, 386
FaqI	GGGAC	2 cut(s)	276, 2702
FauNDI	CATATG	1 cut(s)	819
FbaI	TGATCA	4 cut(s)	349, 1357, 1713, 1912
FblI	GTMKAC	2 cut(s)	1738, 1755
Fnu4HI	GCNGC	7 cut(s)	52, 815, 927, 1161, 2121, 2124, 2611
FriOI	GRGCYC	1 cut(s)	41
Fsp4HI	GCNGC	7 cut(s)	52, 815, 927, 1161, 2121, 2124, 2611
FspBI	CTAG	6 cut(s)	359, 1070, 1283, 2103, 2817, 2901
GlaI	GCGC	3 cut(s)	278, 325, 2581
GluI	GCNGC	7 cut(s)	52, 815, 927, 1161, 2121, 2124, 2611
GsaI	CCCAGC	2 cut(s)	59, 2610
GsuI	CTGGAG	3 cut(s)	494, 1043, 1952
HaeII	RGCGCY	2 cut(s)	280, 2583
HaeIII	GGCC	4 cut(s)	54, 871, 946, 2622
HapII	CCGG	2 cut(s)	1494, 1888
HgaI	GACGC	1 cut(s)	348
HhaI	GCGC	3 cut(s)	279, 326, 2582
Hin1I	GRCGYC	1 cut(s)	340
Hin6I	GCGC	3 cut(s)	277, 324, 2580
HinP1I	GCGC	3 cut(s)	277, 324, 2580
HincII	GTYRAC	1 cut(s)	2275
HindII	GTYRAC	1 cut(s)	2275
HindIII	AAGCTT	3 cut(s)	1383, 1637, 1899
HpaII	CCGG	2 cut(s)	1494, 1888
HphI	GGTGA	6 cut(s)	773, 1382, 1544, 1567, 1570, 2505
Hpy99I	CGWCG	2 cut(s)	342, 1746
HpyCH4III	ACNGT	6 cut(s)	129, 702, 1488, 2235, 2279, 2666
HpyF10VI	GCNNNNNNNGC	7 cut(s)	943, 1214, 1264, 1273, 1544, 2619, 2879
HpyF3I	CTNAG	8 cut(s)	484, 694, 765, 1106, 1113, 1428, 2082, 2330
Hsp92I	GRCGYC	1 cut(s)	340
HspAI	GCGC	3 cut(s)	277, 324, 2580
KpnI	GGTACC	2 cut(s)	993, 1888
Ksp22I	TGATCA	4 cut(s)	349, 1357, 1713, 1912
LmnI	GCTCC	5 cut(s)	44, 85, 421, 1295, 2833
Lsp1109I	GCAGC	6 cut(s)	826, 913, 1147, 2132, 2135, 2622
LweI	GCATC	8 cut(s)	143, 997, 1124, 1645, 2135, 2383, 2405, 2659
MaeI	CTAG	6 cut(s)	359, 1070, 1283, 2103, 2817, 2901
MflI	RGATCY	3 cut(s)	65, 1073, 1404
MhlI	GDGCHC	2 cut(s)	41, 234
MlyI	GAGTC	4 cut(s)	980, 2416, 2767, 2848
MmeI	TCCRAC	5 cut(s)	466, 549, 2074, 2187, 2701
Mph1103I	ATGCAT	2 cut(s)	2030, 2398
MroXI	GAANNNNTTC	2 cut(s)	1152, 2470
MslI	CAYNNNNRTG	1 cut(s)	2655
MspA1I	CMGCKG	1 cut(s)	1882
MspCI	CTTAAG	1 cut(s)	686
MspI	CCGG	2 cut(s)	1494, 1888
MspR9I	CCNGG	7 cut(s)	473, 1013, 1315, 1495, 1931, 2227, 2406
Mva1269I	GAATGC	2 cut(s)	898, 1608
MvaI	CCWGG	6 cut(s)	473, 1013, 1315, 1931, 2227, 2406
MvnI	CGCG	1 cut(s)	912
MwoI	GCNNNNNNNGC	7 cut(s)	943, 1214, 1264, 1273, 1544, 2619, 2879
NciI	CCSGG	1 cut(s)	1495
NcoI	CCATGG	1 cut(s)	2617
NdeI	CATATG	1 cut(s)	819
NlaIV	GGNNCC	4 cut(s)	991, 1277, 1886, 2675
NmuCI	GTSAC	4 cut(s)	1388, 2148, 2511, 2819
NsiI	ATGCAT	2 cut(s)	2030, 2398
NspI	RCATGY	1 cut(s)	251
NspV	TTCGAA	1 cut(s)	2567
PagI	TCATGA	2 cut(s)	772, 2317
PceI	AGGCCT	1 cut(s)	871
PcsI	WCGNNNNNNNCGW	1 cut(s)	190
PctI	GAATGC	2 cut(s)	898, 1608
PdmI	GAANNNNTTC	2 cut(s)	1152, 2470
PflMI	CCANNNNNTGG	1 cut(s)	320
PfoI	TCCNGGA	2 cut(s)	2225, 2404
PinAI	ACCGGT	1 cut(s)	1887
PkrI	GCNGC	7 cut(s)	53, 816, 928, 1162, 2122, 2125, 2612
PleI	GAGTC	4 cut(s)	979, 2416, 2766, 2847
PpsI	GAGTC	4 cut(s)	979, 2416, 2766, 2847
PshBI	ATTAAT	1 cut(s)	2015
PsiI	TTATAA	1 cut(s)	642
Psp124BI	GAGCTC	1 cut(s)	41
Psp6I	CCWGG	6 cut(s)	471, 1011, 1313, 1929, 2225, 2404
PspFI	CCCAGC	2 cut(s)	55, 2606
PspGI	CCWGG	6 cut(s)	471, 1011, 1313, 1929, 2225, 2404
PspN4I	GGNNCC	4 cut(s)	991, 1277, 1886, 2675
PspPI	GGNCC	6 cut(s)	20, 29, 53, 1412, 1491, 2792
PsrI	GAACNNNNNNTAC	2 cut(s)	2290, 2322
PstI	CTGCAG	2 cut(s)	1380, 1549
PsuI	RGATCY	3 cut(s)	65, 1073, 1404
RsaI	GTAC	7 cut(s)	699, 991, 1443, 1507, 1612, 1886, 1892
RsaNI	GTAC	7 cut(s)	698, 990, 1442, 1506, 1611, 1885, 1891
RseI	CAYNNNNRTG	1 cut(s)	2655
SacI	GAGCTC	1 cut(s)	41
SatI	GCNGC	7 cut(s)	52, 815, 927, 1161, 2121, 2124, 2611
Sau96I	GGNCC	6 cut(s)	20, 29, 53, 1412, 1491, 2792
ScaI	AGTACT	1 cut(s)	1443
SchI	GAGTC	4 cut(s)	980, 2416, 2767, 2848
ScrFI	CCNGG	7 cut(s)	473, 1013, 1315, 1495, 1931, 2227, 2406
SduI	GDGCHC	2 cut(s)	41, 234
SfaNI	GCATC	8 cut(s)	143, 997, 1124, 1645, 2135, 2383, 2405, 2659
SfcI	CTRYAG	2 cut(s)	1376, 1545
SfuI	TTCGAA	1 cut(s)	2567
SinI	GGWCC	5 cut(s)	20, 29, 1412, 1491, 2792
SmiMI	CAYNNNNRTG	1 cut(s)	2655
SmlI	CTYRAG	3 cut(s)	199, 686, 857
SmoI	CTYRAG	3 cut(s)	199, 686, 857
SseBI	AGGCCT	1 cut(s)	871
SsiI	CCGC	6 cut(s)	51, 83, 910, 1882, 2536, 2637
SspMI	CTAG	6 cut(s)	359, 1070, 1283, 2103, 2817, 2901
SstI	GAGCTC	1 cut(s)	41
StuI	AGGCCT	1 cut(s)	871
StyD4I	CCNGG	7 cut(s)	471, 1011, 1313, 1493, 1929, 2225, 2404
StyI	CCWWGG	3 cut(s)	1775, 2617, 2715
TaaI	ACNGT	6 cut(s)	129, 702, 1488, 2235, 2279, 2666
TaqI	TCGA	6 cut(s)	35, 103, 137, 1156, 1981, 2567
TaqII	GACCGA	2 cut(s)	1773, 2809
TatI	WGTACW	2 cut(s)	697, 1441
TauI	GCSGC	1 cut(s)	54
TscAI	CASTG	6 cut(s)	359, 550, 724, 982, 1723, 1969
TseFI	GTSAC	4 cut(s)	1388, 2148, 2511, 2819
TseI	GCWGC	6 cut(s)	814, 926, 1160, 2120, 2123, 2610
Tsp45I	GTSAC	4 cut(s)	1388, 2148, 2511, 2819
TspGWI	ACGGA	5 cut(s)	31, 1759, 2425, 2537, 2542
TspRI	CASTG	6 cut(s)	359, 550, 724, 982, 1723, 1969
Van91I	CCANNNNNTGG	1 cut(s)	320
Vha464I	CTTAAG	1 cut(s)	686
VpaK11BI	GGWCC	5 cut(s)	20, 29, 1412, 1491, 2792
VspI	ATTAAT	1 cut(s)	2015
XagI	CCTNNNNNAGG	1 cut(s)	1934
XapI	RAATTY	4 cut(s)	303, 1722, 1954, 2409
XbaI	TCTAGA	2 cut(s)	358, 1282
XceI	RCATGY	1 cut(s)	251
XmiI	GTMKAC	2 cut(s)	1738, 1755
XmnI	GAANNNNTTC	2 cut(s)	1152, 2470
XspI	CTAG	6 cut(s)	359, 1070, 1283, 2103, 2817, 2901
ZrmI	AGTACT	1 cut(s)	1443
Zsp2I	ATGCAT	2 cut(s)	2030, 2398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.