Rorug07G0081200

phosphoribosylformylglycinamidine synthase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
6363097 .. 6365211
2115 bp
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UTR
Exon/CDS
Intron
Rorug07G0081200.1

Sequence Viewer

Length: 186 bp
ATGAACTGGAACCCTTTCATCCTCATGCTACAGCTGAAAGCCCTCCTAAAGTCCATTTGGAGAAGGCTTTATCAGATGCCATGTTATATGCCCTCCCTCCGAAAGTTCCCTTTCCTTCAGATTCTGCTTTTGGCTCATTTCAGTCTCTGTCATCAGGAGGCTCAGATTCTGCTTCTGGCTCATTGA

Protein Analysis

61

Amino Acids

7.38

Weight (kDa)

9.9

Isoelectric Point (pI)

76.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 101
AluBI AGCT 1 cut(s) 34
AluI AGCT 1 cut(s) 34
Alw26I GTCTC 1 cut(s) 149
AlwNI CAGNNNCTG 3 cut(s) 124, 147, 169
Asp700I GAANNNNTTC 1 cut(s) 14
BcoDI GTCTC 1 cut(s) 149
BfmI CTRYAG 1 cut(s) 29
BmiI GGNNCC 1 cut(s) 11
BmsI GCATC 1 cut(s) 66
Bse1I ACTGG 1 cut(s) 11
BseGI GGATG 1 cut(s) 18
BseMII CTCAG 1 cut(s) 176
BseNI ACTGG 1 cut(s) 11
BsmAI GTCTC 1 cut(s) 149
BspCNI CTCAG 1 cut(s) 175
BspLI GGNNCC 1 cut(s) 11
BsrI ACTGG 1 cut(s) 11
BstDEI CTNAG 1 cut(s) 162
BstF5I GGATG 1 cut(s) 18
BstMAI GTCTC 1 cut(s) 149
BstSFI CTRYAG 1 cut(s) 29
BtsCI GGATG 1 cut(s) 18
CaiI CAGNNNCTG 3 cut(s) 124, 147, 169
CviAII CATG 2 cut(s) 25, 81
CviJI RGCY 6 cut(s) 34, 41, 67, 134, 161, 179
CviKI_1 RGCY 6 cut(s) 34, 41, 67, 134, 161, 179
DdeI CTNAG 1 cut(s) 162
Eco57I CTGAAG 1 cut(s) 101
FaeI CATG 2 cut(s) 28, 84
FaiI YATR 4 cut(s) 26, 82, 87, 89
FatI CATG 2 cut(s) 24, 80
FokI GGATG 1 cut(s) 5
Hin1II CATG 2 cut(s) 28, 84
HinfI GANTC 2 cut(s) 121, 166
Hpy188I TCNGA 4 cut(s) 75, 101, 120, 165
Hpy188III TCNNGA 1 cut(s) 155
HpyAV CCTTC 2 cut(s) 57, 125
HpyF3I CTNAG 1 cut(s) 162
Hsp92II CATG 2 cut(s) 28, 84
LpnPI CCDG 2 cut(s) 140, 161
LweI GCATC 1 cut(s) 66
MnlI CCTC 5 cut(s) 32, 53, 103, 107, 151
MroXI GAANNNNTTC 1 cut(s) 14
MslI CAYNNNNRTG 1 cut(s) 23
MspA1I CMGCKG 1 cut(s) 34
NlaIII CATG 2 cut(s) 28, 84
NlaIV GGNNCC 1 cut(s) 11
PdmI GAANNNNTTC 1 cut(s) 14
PfeI GAWTC 2 cut(s) 121, 166
PspN4I GGNNCC 1 cut(s) 11
PstNI CAGNNNCTG 3 cut(s) 124, 147, 169
PvuII CAGCTG 1 cut(s) 34
RseI CAYNNNNRTG 1 cut(s) 23
SetI ASST 1 cut(s) 36
SfaNI GCATC 1 cut(s) 66
SfcI CTRYAG 1 cut(s) 29
SgeI CNNG 4 cut(s) 19, 37, 93, 167
SmiMI CAYNNNNRTG 1 cut(s) 23
TfiI GAWTC 2 cut(s) 121, 166
TspDTI ATGAA 2 cut(s) 7, 17
XmnI GAANNNNTTC 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.