Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005762

Physical Location & Seq

Genomic Coordinates Forward (+)

17671289 .. 17677619

Gene Structure 6331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG209600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4140 bp

ATGCTTTGGGGCATGCTGCACAGTTCAGTGCGGGGTTCTGCTAATAGGAGAAATGCTTCATTGAGATGTCGTGCTCAAGAGAAGCCCACAGCTGTTGTTTCAGCTGTGAGCAGTTCGGTGGAGGCGCTACCAACTGTGGTTGAGAAGCCTTCTTCCTCAGTTATCCATTTTTATCGTGTCCCTCTCATTCAGGAGAGTGCAACGTCTGAGCTTCTCAAAACCGTGCAGTCAAAGATTTCGAGCCAGATAGTTGGTTTGAAAACTGAGCAGTGTTTCAACATTGGGCTCATTTCGCAGCTTTCTAGTGACAAGCTTTCGGTGCTTAAGTGGCTTCTTCAGGAGACTTATGAGCCGGAGAATTTGGGGGTCGACAGCTTTCTTGAAAAGAAGAGGCAGGAAGGGCTGAACACAGTTATTGTTGAGGTTGGTCCTCGGTTGTCGTTTACAACAGCATGGTCTTCCAATGCTGTCTCGATATGTAGAGCTTGTGGCTTGACAGAGGTGACTCGTTTGGAACGGTCGAGGAGGTACTTGTTGTTTAGTAAAGGAAACTTGCAGGATCAACAGATTAATGAGTTTGCTGCAATGGTTCATGATCGGATGACGGAGTGTGTTTACACCCAGCAGCTCACTTCTTTTGAAACAAGTTTGGTTCCCGACAAAGTACGCCATATTCCTGTCATGGAGAGAGGTCGGAAGGCGTTAGAGGAGATTAATCAGGAAATGGGTTTGGCATTTGATGAGCAAGATCTCCAATACTACACCAGGCTATTCAAGGAAGAGATCAAGCGGAATCCAACAACAGTTGAACTCTTTGATATTGCACAGTCCAACAGTGAGCATAGCAGGCACTGGTTTTTTACTGGTAAAATTTTTATAGATGGACAGCCCATGGACAAAACTCTAATGCAAATTGTGAAGAGCACTTTGCAAGCAAACCCAAACAATTCTGTCATTGGGTTTAAGGACAACTCGAGTGCAATCAGAGGATTTCTTGTGAAGCAATTGCGACCGGTTCAGCCAGGTTCAACATCTCCATTGCACATGTCTGCTCGTGACCTTGATATATTATTTACTGCAGAGACCCATAATTTTCCATGTGCTGTAGCGCCTTACCCTGGTGCAGAGACAGGTGCAGGAGGTAGAATCAGAGACACCCATGCAACTGGAAGGGGCTCTTTTGTGGTAGCATCTACTGCTGGTTATTGTGTCGGAAATCTCAATATGGAAGGATCTTATGCTCCTTGGGAAGATCCGTCTTTCTTGTATCCATCAAATTTGGCCTCACCTTTGCAGATCCTCATAGATGCTAGTAATGGTGCATCAGACTATGGCAACAAATTTGGTGAGCCCTTGATTCAGGGCTACACTAGAACCTTTGGAATGAGACTCCCAAGTGGTGAGAGGCGGGAATGGTTGAAGCCAATCATGTTCAGTGCAGGAATTGGACAGATTGATCACACCCATATAACAAAGGGAGAGCCTGATATTGGCATGCTAGTTGTAAAGATTGGAGGCCCTGCTTATCGTATTGGTATGGGTGGTGGGGCTGCATCGAGCATGGTTAGTGGCCAAAATGATGCGGAGCTTGATTTCAATGCCGTACAGCGTGGGGATGCAGAGATGGCACAAAAATTGTATCGTGTTGTTCGTGCCTGCATTGAGATGGGGGAGAGTAACCCAATCATTAGCATTCATGACCAAGGAGCTGGTGGAAACTGCAACGTGGTTAAGGAAATTATTTATCCGAAGGGTGGTGAGATTGATATCCGGGCAATTGTGGTTGGTGATTACACAATGTCTGTCTTGGAGATATGGGGCGCAGAATATCAGGAACAAGATGCCATCTTGGTTAAACCTGAAAGTCGCGAACTTTTGCAATCAATATGTGAAAGAGAAAGGTGTTCTATGGCTGTTATTGGAACAATAAATGGTGAGGGACGTATTGTTTTAATTGATAGCTTAGCTATTGAAAAATCTAAATCAAGTGGCCTCCCTCCACCTGATCCTGCTGTCGATTTGGAGCTTGAGAAAGTACTTGGTGATATGCCACAAAAAAGCTTTAAATTCGAGCGGATGGCAGATGCACGAGAGCCACTTGATATTGCCCCTGGAATCACAGTAATGGATGCTCTTAAGAGAGTTTTAAGACTTCCATCCATCTGTTCAAAGCGCTTCTTGACCTCGAAAGTAGACAGGTGTGTTACAGGTCTGGTAGCTCAGCAGCAAACTGTCGGGCCCCTGCAAATTCCTCTCTCTGATGTTGGAGTAATTGCTCAGACTTTTACCGGCTTGACTGGAGGTGCATGTGCCATTGGGGAGCAGCCAATCAAAGGTTTGTTGGATCCAAAAGCAATGGCTAGATTGGCAGTTGGAGAAGCACTCACAAATCTTGTTTGGGCAAAGGTCACTTCTCTATCTGATGTTAAAGCAAGTGGGAATTGGATGTATGCAGCCAAGCTTGATGGTGAAGGAGCAGCCATGTATGATGCTGCTAATGCTCTTTCAGAGGCGATGATCAAACTTGGTATTGCTATTGATGGGGGAAAGGACAGTCTTTCCATGGCAGCCCATGCTGCAGGAGAGGTTGTTAAGGCTCCTGGAAATCTTGTAATCAGTGTTTATTGTACTTGTCCTGACATAACAAAAACAGTAACCCCAGATTTGAAGCTTGGAGATGATGGTGTTCTGCTTCACATTGATTTGGCCGCAGGAAAGCGGCGATTAGGTGGCTCTGCTCTTGCTCAGGTTTTTGACCAGATTGGGAACGATTGTCCTGACCTTGAGGATGTTCTGTATCTGAAGCGAGTGTTTGAGGGAGTTCAAGGCCTTCTTGATGATGAATTGATCTCTGCTGGCCATGATATCAGTGATGGTGGGCTTCTGGTCTGTGCCCTTGAGATGGCATTTGCTGGCAATCGTGGCATTAATTTGGACTTGACTTCGCACCGGAAAAGCCTCTTCCAAACAATTTTTTCTGAAGAGCTTGGTCTGATTATTGAGGTCAGCAAGAAAAACTTAGATATGGTAATAGGAAAGCTAAGCAGTGGAGGTATTTCTGCAGAGATTATTGGACAGGTAACTGCCACACCTTCAATAGTGTTAAAGGTGGATGGGGTAACTCATTTGAACGAAAGTACTTCTTTTGTAAGGGACATGTGGGAGGATACTAGTTTTCAGCTGGAAAAATTTCAGAGATTGGCTTCTTGTGTTGATCTAGAGAAAGAAGGGTTGAAAGATAGGCATGAGCCTTCATGGCAGTTGTCTTTTACTCCATCCTTCACAGATGAAAAGTATATGACCACGACCTCCAAACCGAAGGTGGCTGTTATTCGAGAAGAAGGAAGCAATGGGGATAGAGAAATGGCTGCGGCATTTTATGCTGCTGGCTTTGAGCCATGGGATATTACAATGTCAGACCTTCTTAATGGAGCTGTATCACTCCAAGAGTTCCGTGGAATTGTGTTTGTTGGAGGTTTTAGCTATGCTGATGTCCTTGATTCTGCAAAAGGTTGGTCTGCTTCAATTAGATTTAATCAGCCCCTTCTAAATCAATTTCAGGAGTTTTACAAGAGGCACGACACTTTCAGTCTTGGCGTTTGCAATGGGTGTCAGCTTATGGCTCTTTTGGGCTGGGTCCCAGGTCCTCAAGTTGGGGGTGTGCATGGTGGTGGTGGGGATCCATCACAGCCGAGGTTCATTCACAATGAGTCAGGCCGGTTTGAGTGTCGCTTTACTAGTGTAAAAATTAAGGACTCACCTTCTATAATGTTAAAAGGAATGGAAGGCAGTACTTTGGGCGTGTGGGCTGCCCATGGTGAGGGAAGAGCCTATTTTCCTGATGATGGTGTTTTTGATCGTGTGCTCCACTCCAAGTTGGCTCCAGTAAGATATTGTGATGATGATGGGATTGAAACGGAACTTTATCCCTTCAACCTGAATGGCTCTCCCTTGGGAGTTGCGGCAATTTGTTCACCAGATGGGAGGCATCTTGCCATGATGCCTCATCCAGAGCGCTGCTTCTTAATGTGGCAGTACCCATGGTATCCCAAGCAGTGGGATGTTGAAAAGAAAGGCCCTAGTCCATGGCTACGGATGTTCCAGAATGCCAGAGAGTGGTGCTCCAGAAATGATGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004642 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0007275 GO:0008144 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009555 GO:0009570 GO:0016874 GO:0016879 GO:0016884 GO:0017076 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:0055046 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

AIRS_C GATase_5

Protein Analysis

1379

Amino Acids

150.9

Weight (kDa)

5.46

Isoelectric Point (pI)

37.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FGAR-AT_N	PF18076	92 - 209	2.7e-21	Formylglycinamide ribonucleotide amidotransferase N-terminal
FGAR-AT_linker	PF18072	235 - 284	4.7e-11	Formylglycinamide ribonucleotide amidotransferase linker domain
AIRS_C	PF02769	498 - 652	1.8e-27	AIR synthase related protein, C-terminal domain
FGAR-AT_PurM_N-like	PF22689	723 - 876	2e-52	FGAR-AT PurM_N-like domain
AIRS_C	PF02769	907 - 1037	3.1e-18	AIR synthase related protein, C-terminal domain
GATase_5	PF13507	1105 - 1374	2.5e-105	CobB/CobQ-like glutamine amidotransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74260
fragaria_vesca	FvH4_5g19530 FvH4_5g19530 FvH4_5g19530
malus_domestica	MD03G1203100.v1.1 MD04G1022300.v1.1
prunus_persica	Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.8G024000_v2.0.a1 Prupe.8G024000_v2.0.a1 Prupe.8G024000_v2.0.a1
pyrus_communis	pycom04g01890 pycom04g01930
rosa_chinensis	RchiOBHm_Chr7g0204141
rosa_laevigata	RLG00000003485
rosa_multiflora	Rmu_sc0001311.1_g000031
rosa_roxburghii	Rroxscaffold_3G00253310
rosa_rugosa	Rorug07G0081100 Rorug07G0081200 Rorug07G0081200
rosa_samantha	Rh7AG211000 Rh7BG209600 Rh7CG223500 Rh7DG217800
rosa_wichuraiana	Rw7G018360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	4056, 4116
AccBSI	CCGCTC	1 cut(s)	2074
AccI	GTMKAC	2 cut(s)	369, 2193
AccII	CGCG	1 cut(s)	1869
AciI	CCGC	9 cut(s)	31, 790, 1408, 1583, 2074, 2709, 2719, 3371, 3962
AclWI	GGATC	9 cut(s)	567, 1240, 1247, 1291, 2000, 2339, 2352, 3674, 3687
AcoI	YGGCCR	3 cut(s)	1570, 2706, 2857
AcsI	RAATTY	7 cut(s)	358, 870, 1276, 1340, 2066, 2247, 3188
AcuI	CTGAAG	3 cut(s)	320, 2822, 3000
AfaI	GTAC	8 cut(s)	530, 666, 1605, 2037, 2629, 3139, 3793, 4037
AfeI	AGCGCT	2 cut(s)	2174, 4016
AflII	CTTAAG	2 cut(s)	323, 2135
AflIII	ACRYGT	2 cut(s)	1044, 3156
AgeI	ACCGGT	1 cut(s)	1012
AhlI	ACTAGT	2 cut(s)	3170, 3737
AjnI	CCWGG	6 cut(s)	764, 1021, 1117, 2110, 2599, 3640
Alw21I	GWGCWC	4 cut(s)	76, 926, 3867, 4124
Alw26I	GTCTC	6 cut(s)	335, 475, 1076, 1121, 1146, 1381
AlwI	GGATC	9 cut(s)	567, 1240, 1247, 1291, 2000, 2339, 2352, 3674, 3687
AlwNI	CAGNNNCTG	1 cut(s)	852
Ama87I	CYCGRG	1 cut(s)	973
Aor51HI	AGCGCT	2 cut(s)	2174, 4016
ApaI	GGGCCC	1 cut(s)	2241
ApoI	RAATTY	7 cut(s)	358, 870, 1276, 1340, 2066, 2247, 3188
ArsI	GACNNNNNNTTYG	2 cut(s)	3500, 3532
AseI	ATTAAT	3 cut(s)	570, 714, 2928
AsiGI	ACCGGT	1 cut(s)	1012
Asp700I	GAANNNNTTC	2 cut(s)	55, 3189
AspLEI	GCGC	5 cut(s)	127, 1111, 1823, 2175, 4017
AspS9I	GGNCC	7 cut(s)	428, 1517, 2237, 2238, 3637, 3644, 4076
AsuC2I	CCSGG	1 cut(s)	1772
AvaI	CYCGRG	1 cut(s)	973
AvaII	GGWCC	3 cut(s)	428, 3637, 3644
BaeGI	GKGCMC	2 cut(s)	2241, 2896
BalI	TGGCCA	2 cut(s)	1572, 2859
BamHI	GGATCC	2 cut(s)	2344, 3679
BanII	GRGCYC	4 cut(s)	288, 1178, 1353, 2241
BauI	CACGAG	2 cut(s)	1053, 2088
BbsI	GAAGAC	1 cut(s)	450
Bbv12I	GWGCWC	4 cut(s)	76, 926, 3867, 4124
BceAI	ACGGC	1 cut(s)	1586
BciT130I	CCWGG	6 cut(s)	766, 1023, 1119, 2112, 2601, 3642
BciVI	GTATCC	3 cut(s)	1278, 3160, 4056
BclI	TGATCA	2 cut(s)	1456, 2517
BcnI	CCSGG	1 cut(s)	1772
BcoDI	GTCTC	6 cut(s)	335, 475, 1076, 1121, 1146, 1381
BcuI	ACTAGT	2 cut(s)	3170, 3737
BfaI	CTAG	9 cut(s)	303, 1311, 1371, 1499, 2361, 3171, 3218, 3738, 4080
BfmI	CTRYAG	4 cut(s)	1077, 1104, 2577, 3060
BfoI	RGCGCY	4 cut(s)	128, 1112, 2176, 4018
BfrI	CTTAAG	2 cut(s)	323, 2135
BfuI	GTATCC	3 cut(s)	1278, 3160, 4056
BglI	GCCNNNNNGGC	1 cut(s)	3256
BglII	AGATCT	1 cut(s)	748
BlpI	GCTNAGC	3 cut(s)	1963, 2220, 3041
BmcAI	AGTACT	3 cut(s)	2037, 3139, 3793
Bme1390I	CCNGG	7 cut(s)	766, 1023, 1119, 1772, 2112, 2601, 3642
Bme18I	GGWCC	3 cut(s)	428, 3637, 3644
BmeT110I	CYCGRG	1 cut(s)	973
BmgT120I	GGNCC	7 cut(s)	428, 1517, 2237, 2238, 3637, 3644, 4076
BmiI	GGNNCC	9 cut(s)	654, 2239, 2240, 2346, 2598, 3638, 3639, 3681, 3882
BmrFI	CCNGG	7 cut(s)	766, 1023, 1119, 1772, 2112, 2601, 3642
BpiI	GAAGAC	1 cut(s)	450
BplI	GAGNNNNNCTC	4 cut(s)	2367, 2399, 4106, 4138
BpmI	CTGGAG	3 cut(s)	2319, 3867, 4108
Bpu10I	CCTNAGC	1 cut(s)	2745
Bpu1102I	GCTNAGC	3 cut(s)	1963, 2220, 3041
BpuEI	CTTGAG	5 cut(s)	60, 2048, 2804, 2918, 3633
BpuMI	CCSGG	1 cut(s)	1772
BsaBI	GATNNNNATC	1 cut(s)	1766
BsaI	GGTCTC	1 cut(s)	1076
BsaWI	WCCGGW	2 cut(s)	1012, 2949
BsaXI	ACNNNNNCTCC	2 cut(s)	2574, 2604
Bse118I	RCCGGY	3 cut(s)	1012, 2288, 3717
Bse1I	ACTGG	5 cut(s)	857, 868, 1171, 2302, 3884
Bse3DI	GCAATG	5 cut(s)	591, 1037, 2361, 3355, 3610
Bse8I	GATNNNNATC	1 cut(s)	1766
BseBI	CCWGG	6 cut(s)	766, 1023, 1119, 2112, 2601, 3642
BseJI	GATNNNNATC	1 cut(s)	1766
BseMI	GCAATG	5 cut(s)	591, 1037, 2361, 3355, 3610
BseMII	CTCAG	6 cut(s)	171, 198, 255, 2234, 2291, 2759
BseNI	ACTGG	5 cut(s)	857, 868, 1171, 2302, 3884
BseRI	GAGGAG	2 cut(s)	538, 722
BseSI	GKGCMC	2 cut(s)	2241, 2896
BseYI	CCCAGC	2 cut(s)	621, 3633
BsgI	GTGCAG	4 cut(s)	245, 1143, 1155, 1458
Bsh1236I	CGCG	1 cut(s)	1869
Bsh1285I	CGRYCG	2 cut(s)	521, 1013
BshTI	ACCGGT	1 cut(s)	1012
BsiEI	CGRYCG	2 cut(s)	521, 1013
BsiHKAI	GWGCWC	4 cut(s)	76, 926, 3867, 4124
BsiHKCI	CYCGRG	1 cut(s)	973
BsiSI	CCGG	6 cut(s)	353, 1013, 1771, 2289, 2950, 3718
BslFI	GGGAC	4 cut(s)	164, 1953, 3167, 3623
BsmAI	GTCTC	6 cut(s)	335, 475, 1076, 1121, 1146, 1381
BsmFI	GGGAC	4 cut(s)	164, 1953, 3167, 3623
BsmI	GAATGC	2 cut(s)	1692, 4111
Bso31I	GGTCTC	1 cut(s)	1076
BsoBI	CYCGRG	1 cut(s)	973
Bsp120I	GGGCCC	1 cut(s)	2237
Bsp1286I	GDGCHC	9 cut(s)	76, 288, 926, 1178, 1353, 2241, 2896, 3867, 4124
Bsp1720I	GCTNAGC	3 cut(s)	1963, 2220, 3041
Bsp19I	CCATGG	6 cut(s)	891, 2562, 3398, 3814, 4040, 4085
Bsp68I	TCGCGA	1 cut(s)	1869
BspACI	CCGC	9 cut(s)	31, 790, 1408, 1583, 2074, 2709, 2719, 3371, 3962
BspCNI	CTCAG	6 cut(s)	170, 199, 256, 2233, 2290, 2758
BspFNI	CGCG	1 cut(s)	1869
BspHI	TCATGA	2 cut(s)	592, 1696
BspLI	GGNNCC	9 cut(s)	654, 2239, 2240, 2346, 2598, 3638, 3639, 3681, 3882
BspMAI	CTGCAG	3 cut(s)	1081, 2581, 3064
BspPI	GGATC	9 cut(s)	567, 1240, 1247, 1291, 2000, 2339, 2352, 3674, 3687
BspQI	GCTCTTC	3 cut(s)	914, 2976, 3820
BspTI	CTTAAG	2 cut(s)	323, 2135
BspTNI	GGTCTC	1 cut(s)	1076
BsrBI	CCGCTC	1 cut(s)	2074
BsrDI	GCAATG	5 cut(s)	591, 1037, 2361, 3355, 3610
BsrFI	RCCGGY	3 cut(s)	1012, 2288, 3717
BsrI	ACTGG	5 cut(s)	857, 868, 1171, 2302, 3884
BssAI	RCCGGY	3 cut(s)	1012, 2288, 3717
BssSI	CACGAG	2 cut(s)	1053, 2088
BssT1I	CCWWGG	9 cut(s)	891, 1244, 1702, 2562, 3398, 3814, 3951, 4040, 4085
Bst2BI	CACGAG	2 cut(s)	1053, 2088
Bst2UI	CCWGG	6 cut(s)	766, 1023, 1119, 2112, 2601, 3642
Bst6I	CTCTTC	6 cut(s)	383, 774, 914, 2966, 2976, 3820
BstAFI	CTTAAG	2 cut(s)	323, 2135
BstAPI	GCANNNNNTGC	3 cut(s)	1196, 2573, 3380
BstC8I	GCNNGC	8 cut(s)	14, 848, 933, 1496, 1657, 2857, 2914, 3388
BstDEI	CTNAG	9 cut(s)	157, 207, 264, 1963, 2220, 2277, 2745, 3019, 3041
BstDSI	CCRYGG	7 cut(s)	891, 2562, 3398, 3454, 3814, 4040, 4085
BstFNI	CGCG	1 cut(s)	1869
BstH2I	RGCGCY	4 cut(s)	128, 1112, 2176, 4018
BstHHI	GCGC	5 cut(s)	127, 1111, 1823, 2175, 4017
BstMAI	GTCTC	6 cut(s)	335, 475, 1076, 1121, 1146, 1381
BstMCI	CGRYCG	2 cut(s)	521, 1013
BstNI	CCWGG	6 cut(s)	766, 1023, 1119, 2112, 2601, 3642
BstNSI	RCATGY	5 cut(s)	16, 1048, 1498, 2310, 3160
BstSCI	CCNGG	7 cut(s)	764, 1021, 1117, 1770, 2110, 2599, 3640
BstSFI	CTRYAG	4 cut(s)	1077, 1104, 2577, 3060
BstSLI	GKGCMC	2 cut(s)	2241, 2896
BstUI	CGCG	1 cut(s)	1869
BstV2I	GAAGAC	1 cut(s)	450
BstX2I	RGATCY	6 cut(s)	748, 1232, 1252, 1296, 2344, 3679
BstXI	CCANNNNNNTGG	3 cut(s)	251, 1166, 1709
BstYI	RGATCY	6 cut(s)	748, 1232, 1252, 1296, 2344, 3679
BsuI	GTATCC	3 cut(s)	1278, 3160, 4056
BtgI	CCRYGG	7 cut(s)	891, 2562, 3398, 3454, 3814, 4040, 4085
BtgZI	GCGATG	1 cut(s)	2528
BtsI	GCAGTG	3 cut(s)	275, 3052, 4061
BtsIMutI	CAGTG	9 cut(s)	33, 275, 841, 850, 1441, 2623, 2875, 3052, 4061
BtuMI	TCGCGA	1 cut(s)	1869
Cac8I	GCNNGC	8 cut(s)	14, 848, 933, 1496, 1657, 2857, 2914, 3388
CaiI	CAGNNNCTG	1 cut(s)	852
CciI	TCATGA	2 cut(s)	592, 1696
CfoI	GCGC	5 cut(s)	127, 1111, 1823, 2175, 4017
Cfr10I	RCCGGY	3 cut(s)	1012, 2288, 3717
Cfr13I	GGNCC	7 cut(s)	428, 1517, 2237, 2238, 3637, 3644, 4076
Csp6I	GTAC	8 cut(s)	529, 665, 1604, 2036, 2628, 3138, 3792, 4036
CspAI	ACCGGT	1 cut(s)	1012
CspCI	CAANNNNNGTGG	2 cut(s)	76, 111
CviQI	GTAC	8 cut(s)	529, 665, 1604, 2036, 2628, 3138, 3792, 4036
DdeI	CTNAG	9 cut(s)	157, 207, 264, 1963, 2220, 2277, 2745, 3019, 3041
DraI	TTTAAA	1 cut(s)	2065
EaeI	YGGCCR	3 cut(s)	1570, 2706, 2857
Eam1104I	CTCTTC	6 cut(s)	383, 774, 914, 2966, 2976, 3820
EarI	CTCTTC	6 cut(s)	383, 774, 914, 2966, 2976, 3820
Eco130I	CCWWGG	9 cut(s)	891, 1244, 1702, 2562, 3398, 3814, 3951, 4040, 4085
Eco147I	AGGCCT	1 cut(s)	2829
Eco24I	GRGCYC	4 cut(s)	288, 1178, 1353, 2241
Eco31I	GGTCTC	1 cut(s)	1076
Eco32I	GATATC	2 cut(s)	1768, 2866
Eco47I	GGWCC	3 cut(s)	428, 3637, 3644
Eco47III	AGCGCT	2 cut(s)	2174, 4016
Eco57I	CTGAAG	3 cut(s)	320, 2822, 3000
Eco88I	CYCGRG	1 cut(s)	973
EcoO109I	RGGNCCY	5 cut(s)	1517, 2238, 3637, 3644, 4076
EcoRII	CCWGG	6 cut(s)	764, 1021, 1117, 2110, 2599, 3640
EcoRV	GATATC	2 cut(s)	1768, 2866
EcoT14I	CCWWGG	9 cut(s)	891, 1244, 1702, 2562, 3398, 3814, 3951, 4040, 4085
EcoT38I	GRGCYC	4 cut(s)	288, 1178, 1353, 2241
ErhI	CCWWGG	9 cut(s)	891, 1244, 1702, 2562, 3398, 3814, 3951, 4040, 4085
FaqI	GGGAC	4 cut(s)	164, 1953, 3167, 3623
FauI	CCCGC	2 cut(s)	24, 1401
FbaI	TGATCA	2 cut(s)	1456, 2517
FblI	GTMKAC	2 cut(s)	369, 2193
FriOI	GRGCYC	4 cut(s)	288, 1178, 1353, 2241
FspBI	CTAG	9 cut(s)	303, 1311, 1371, 1499, 2361, 3171, 3218, 3738, 4080
GlaI	GCGC	5 cut(s)	126, 1110, 1822, 2174, 4016
GsaI	CCCAGC	2 cut(s)	625, 3637
GsuI	CTGGAG	3 cut(s)	2319, 3867, 4108
HaeII	RGCGCY	4 cut(s)	128, 1112, 2176, 4018
HapII	CCGG	6 cut(s)	353, 1013, 1771, 2289, 2950, 3718
HhaI	GCGC	5 cut(s)	127, 1111, 1823, 2175, 4017
Hin6I	GCGC	5 cut(s)	125, 1109, 1821, 2173, 4015
HinP1I	GCGC	5 cut(s)	125, 1109, 1821, 2173, 4015
HincII	GTYRAC	1 cut(s)	370
HindII	GTYRAC	1 cut(s)	370
HindIII	AAGCTT	4 cut(s)	311, 2059, 2459, 2669
HinfI	GANTC	9 cut(s)	505, 793, 1146, 1357, 1389, 2115, 3500, 3710, 3755
HpaII	CCGG	6 cut(s)	353, 1013, 1771, 2289, 2950, 3718
Hpy166II	GTNNAC	5 cut(s)	370, 444, 616, 2194, 3974
Hpy8I	GTNNAC	5 cut(s)	370, 444, 616, 2194, 3974
HpyCH4IV	ACGT	3 cut(s)	203, 1725, 1942
HpyF3I	CTNAG	9 cut(s)	157, 207, 264, 1963, 2220, 2277, 2745, 3019, 3041
HpySE526I	ACGT	3 cut(s)	203, 1725, 1942
HspAI	GCGC	5 cut(s)	125, 1109, 1821, 2173, 4015
KflI	GGGWCCC	1 cut(s)	3637
Ksp22I	TGATCA	2 cut(s)	1456, 2517
LguI	GCTCTTC	3 cut(s)	914, 2976, 3820
MaeI	CTAG	9 cut(s)	303, 1311, 1371, 1499, 2361, 3171, 3218, 3738, 4080
MaeII	ACGT	3 cut(s)	203, 1725, 1942
MaeIII	GTNAC	9 cut(s)	305, 502, 1055, 1676, 2203, 2407, 2653, 3079, 3118
MbiI	CCGCTC	1 cut(s)	2074
MfeI	CAATTG	2 cut(s)	1004, 1776
MflI	RGATCY	6 cut(s)	748, 1232, 1252, 1296, 2344, 3679
MhlI	GDGCHC	9 cut(s)	76, 288, 926, 1178, 1353, 2241, 2896, 3867, 4124
MlsI	TGGCCA	2 cut(s)	1572, 2859
MluNI	TGGCCA	2 cut(s)	1572, 2859
MlyI	GAGTC	4 cut(s)	499, 1383, 3719, 3749
MmeI	TCCRAC	8 cut(s)	674, 821, 855, 1192, 2245, 2322, 2353, 3451
Mox20I	TGGCCA	2 cut(s)	1572, 2859
MroXI	GAANNNNTTC	2 cut(s)	55, 3189
MscI	TGGCCA	2 cut(s)	1572, 2859
MslI	CAYNNNNRTG	4 cut(s)	64, 1664, 2123, 3669
Msp20I	TGGCCA	2 cut(s)	1572, 2859
MspA1I	CMGCKG	3 cut(s)	92, 104, 3181
MspCI	CTTAAG	2 cut(s)	323, 2135
MspI	CCGG	6 cut(s)	353, 1013, 1771, 2289, 2950, 3718
MspR9I	CCNGG	7 cut(s)	766, 1023, 1119, 1772, 2112, 2601, 3642
MunI	CAATTG	2 cut(s)	1004, 1776
Mva1269I	GAATGC	2 cut(s)	1692, 4111
MvaI	CCWGG	6 cut(s)	766, 1023, 1119, 2112, 2601, 3642
MvnI	CGCG	1 cut(s)	1869
NciI	CCSGG	1 cut(s)	1772
NcoI	CCATGG	6 cut(s)	891, 2562, 3398, 3814, 4040, 4085
NlaIV	GGNNCC	9 cut(s)	654, 2239, 2240, 2346, 2598, 3638, 3639, 3681, 3882
NmeAIII	GCCGAG	1 cut(s)	3717
NmuCI	GTSAC	4 cut(s)	305, 502, 1055, 2407
NruI	TCGCGA	1 cut(s)	1869
NspI	RCATGY	5 cut(s)	16, 1048, 1498, 2310, 3160
PaeI	GCATGC	2 cut(s)	16, 1498
PaeR7I	CTCGAG	1 cut(s)	973
PagI	TCATGA	2 cut(s)	592, 1696
PceI	AGGCCT	1 cut(s)	2829
PciI	ACATGT	2 cut(s)	1044, 3156
PciSI	GCTCTTC	3 cut(s)	914, 2976, 3820
PcsI	WCGNNNNNNNCGW	1 cut(s)	1648
PctI	GAATGC	2 cut(s)	1692, 4111
PdmI	GAANNNNTTC	2 cut(s)	55, 3189
PfeI	GAWTC	5 cut(s)	793, 1146, 1357, 2115, 3500
PflMI	CCANNNNNTGG	2 cut(s)	4056, 4116
PfoI	TCCNGGA	1 cut(s)	2599
PinAI	ACCGGT	1 cut(s)	1012
PleI	GAGTC	4 cut(s)	499, 1383, 3718, 3749
PpsI	GAGTC	4 cut(s)	499, 1383, 3718, 3749
PpuMI	RGGWCCY	2 cut(s)	3637, 3644
PscI	ACATGT	2 cut(s)	1044, 3156
PshBI	ATTAAT	3 cut(s)	570, 714, 2928
Psp5II	RGGWCCY	2 cut(s)	3637, 3644
Psp6I	CCWGG	6 cut(s)	764, 1021, 1117, 2110, 2599, 3640
PspFI	CCCAGC	2 cut(s)	621, 3633
PspGI	CCWGG	6 cut(s)	764, 1021, 1117, 2110, 2599, 3640
PspN4I	GGNNCC	9 cut(s)	654, 2239, 2240, 2346, 2598, 3638, 3639, 3681, 3882
PspOMI	GGGCCC	1 cut(s)	2237
PspPI	GGNCC	7 cut(s)	428, 1517, 2237, 2238, 3637, 3644, 4076
PspPPI	RGGWCCY	2 cut(s)	3637, 3644
PspXI	VCTCGAGB	1 cut(s)	973
PstI	CTGCAG	3 cut(s)	1081, 2581, 3064
PstNI	CAGNNNCTG	1 cut(s)	852
PsuI	RGATCY	6 cut(s)	748, 1232, 1252, 1296, 2344, 3679
PvuII	CAGCTG	3 cut(s)	92, 104, 3181
RruI	TCGCGA	1 cut(s)	1869
RsaI	GTAC	8 cut(s)	530, 666, 1605, 2037, 2629, 3139, 3793, 4037
RsaNI	GTAC	8 cut(s)	529, 665, 1604, 2036, 2628, 3138, 3792, 4036
RseI	CAYNNNNRTG	4 cut(s)	64, 1664, 2123, 3669
SalI	GTCGAC	1 cut(s)	368
SapI	GCTCTTC	3 cut(s)	914, 2976, 3820
Sau96I	GGNCC	7 cut(s)	428, 1517, 2237, 2238, 3637, 3644, 4076
ScaI	AGTACT	3 cut(s)	2037, 3139, 3793
SchI	GAGTC	4 cut(s)	499, 1383, 3719, 3749
ScrFI	CCNGG	7 cut(s)	766, 1023, 1119, 1772, 2112, 2601, 3642
SduI	GDGCHC	9 cut(s)	76, 288, 926, 1178, 1353, 2241, 2896, 3867, 4124
SfcI	CTRYAG	4 cut(s)	1077, 1104, 2577, 3060
Sfr274I	CTCGAG	1 cut(s)	973
SinI	GGWCC	3 cut(s)	428, 3637, 3644
SlaI	CTCGAG	1 cut(s)	973
SmiMI	CAYNNNNRTG	4 cut(s)	64, 1664, 2123, 3669
SmlI	CTYRAG	8 cut(s)	75, 323, 973, 2027, 2135, 2783, 2897, 3648
SmoI	CTYRAG	8 cut(s)	75, 323, 973, 2027, 2135, 2783, 2897, 3648
SpeI	ACTAGT	2 cut(s)	3170, 3737
SphI	GCATGC	2 cut(s)	16, 1498
SseBI	AGGCCT	1 cut(s)	2829
SsiI	CCGC	9 cut(s)	31, 790, 1408, 1583, 2074, 2709, 2719, 3371, 3962
SspMI	CTAG	9 cut(s)	303, 1311, 1371, 1499, 2361, 3171, 3218, 3738, 4080
StuI	AGGCCT	1 cut(s)	2829
StyD4I	CCNGG	7 cut(s)	764, 1021, 1117, 1770, 2110, 2599, 3640
StyI	CCWWGG	9 cut(s)	891, 1244, 1702, 2562, 3398, 3814, 3951, 4040, 4085
TaiI	ACGT	3 cut(s)	206, 1728, 1945
TatI	WGTACW	4 cut(s)	2035, 2627, 3137, 3791
TauI	GCSGC	4 cut(s)	2711, 2722, 3374, 3965
TfiI	GAWTC	5 cut(s)	793, 1146, 1357, 2115, 3500
TscAI	CASTG	9 cut(s)	33, 275, 841, 857, 1441, 2623, 2875, 3052, 4061
TseFI	GTSAC	4 cut(s)	305, 502, 1055, 2407
Tsp45I	GTSAC	4 cut(s)	305, 502, 1055, 2407
TspDTI	ATGAA	7 cut(s)	48, 581, 1685, 2856, 3243, 3303, 3688
TspGWI	ACGGA	5 cut(s)	620, 1245, 3443, 3932, 4108
TspRI	CASTG	9 cut(s)	33, 275, 841, 857, 1441, 2623, 2875, 3052, 4061
Van91I	CCANNNNNTGG	2 cut(s)	4056, 4116
Vha464I	CTTAAG	2 cut(s)	323, 2135
VpaK11BI	GGWCC	3 cut(s)	428, 3637, 3644
VspI	ATTAAT	3 cut(s)	570, 714, 2928
XapI	RAATTY	7 cut(s)	358, 870, 1276, 1340, 2066, 2247, 3188
XbaI	TCTAGA	1 cut(s)	3217
XceI	RCATGY	5 cut(s)	16, 1048, 1498, 2310, 3160
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1709, 3319, 3452
XhoI	CTCGAG	1 cut(s)	973
XmiI	GTMKAC	2 cut(s)	369, 2193
XmnI	GAANNNNTTC	2 cut(s)	55, 3189
XspI	CTAG	9 cut(s)	303, 1311, 1371, 1499, 2361, 3171, 3218, 3738, 4080
ZrmI	AGTACT	3 cut(s)	2037, 3139, 3793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.