Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001311.1

Orthogroup ID

OG0005762

Physical Location & Seq

Genomic Coordinates Forward (+)

134500 .. 139776

Gene Structure 5277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001311.1_g000031.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4314 bp

atggaagatgaagacgaacccgacgggttgaactggcggaggagttgtgatctgccacagtccaaggttgaggagatggctggtattcgggagatcactgctggtgaattcataaaaggtggccataaactgggcctgttttctcagagaggtcctttgaaaggaagaagccctatgctttggggcacgctgcacagttcagtgcggggttctgctaataggagaaatgcttcattgagatgtcgtgctcaagaaaagcccacagctgttgtttcggctgtgagcagttcggtggaggcgctaccaagtgtgattgagaagccttcttcgtcagttatccatttttatcgtgtccctctcattcaggagagtgcaacatctgagcttctcaaaaccgtgcagtcaaagatttcgagccagatagttggtttgaaaactgagcagtgtttcaacattgggctcagttcgcagctctctagtgaaaagcttttggtgcttaagtggcttcttcaggagacttatgagccagagaatttgggggtcaacagctttcttgaaaagaaaagacatgaaggactgaacacagttattgttgaggttggtcctcggttgtcgtttacaacagcatggtcttccaatgctatttcgatatgtagagcttgtggcttgacagaggtgactcgtttggaacggtcaaggaggtacttgctgtttagtaaggggaacttgcaggaccaacagattaatgagtttgctgcaatggttcatgatcggatgacggagtgtgtttacacccagcagctcacttcttttgaaacaagtgtggttcccgacaaagtacgtcatattcctgttatggagagaggtcggaaggcattagaggagattaatcaggaaatgggtttggcatttgatgagcaagatctccaatactacaccaggctattcaaggaagaaatcaaacggaatccaacaacagttgaactttttgatattgcacagtccaacagtgagcatagcaggcactggttttttactggtaaaatttttatagatggacagcctatggacaaaactctaatgcaaattgtgaagagcactttgcaagcaaacccaaacaattctgtcattgggtttaaggacaactcaagtgcaattaggggatttcttgtgaagcaattgcgaccagttcagccaggttcaacatctccgttgcatatgtccacacgtgacctggatatattatttactgcagagacccataattttccatgtgctgtagcaccttaccctggtgcagagacaggtgcaggaggtagaatcagggacactcatgcaactggaaggggttcttttgtggtagcatctactgctggttattgtgtcgggaatctcaatatggaagggtcttatgctccttgggaagattcatctttcttgtatccatcaaatttggcctcacctttgcagatcctcatagatgctagtaatggtgcatcagactacggcaacaaatttggtgagccattgattcagggatacactagaacctttggaatgaggctcccaagtggtgagaggcgggaatggttgaagccaatcatgtttagtgcaggaattggacaaattgatcacacccatataacaaaaggagagcctgatattggcatgctggttgtaaagattggaggccctgcctatcgtattggtatgggcggtggggctgcatcgagcatggttagtggtcaaaatgacgtggagctggatttcaatgctgtacagcgtggggatgcagagatggcccaaaaattgtatcgtgttgttcgtgcctgcattgagatgggggacagtaacccaatcattagcattcatgaccaaggagctggtggaaactgcaacgtggttaaggaaattatttacccgaagggtggtgagattgatatccgggcaattgtggttggtgattacacaatgtctgtcttggagatatggggtgcagaatatcaggaacaagatgccatcttggttaggcctgaaagtcacgaacttttgcaatcaatatgtgaaagagaaaggtgttccatggctgttattggaacaatcaatggtgagggacgtattgttttaattgatagcttagctattgaaaaatctaaatcaagtggcctccctctccctgatcctgctgtcgatttggagcttgagaaagtacttggtgatatgccacagaaaagctttgagttcgagcggatggcagatgcacgagagccacttgatattgcccctggaatcactgtaatggatgctcttaagagagttttaagacttccatccatctgttcaaagcggttcttgacctcgaaagtagacaggtgtgttacaggtctggtagctcagcagcaaactgtcggccccctacaaattcctctctctgatgttggagtaattgctcagacttttactggcttgactggaggtgcatgtgctattggggagcagccaatcaaaggtttgttggatccaaaagcaatggcgagattggcagttggggaagcactcacaaaccttgtttgggcaaaggtcacttctctatctgatgttaaagcaagtgggaattggatgtttgcggccaagcttgatggtgaaggagcagctatgtatgatgctgctaatgctctttcagacgcaatgatcaaacttggtattgctattgatgggggaaaggacagtctttccatggcagcccatgctgcaggagaggttgttaaggctcctggaaatcttgtaatcagtgtttattgtacttgtccagacataacaaaaacagtgaccccagatttgaagcttggagatgatggtgttctgcttcacattgatttggctgcaggaaagcggcgattaggtggctctgctcttgctcaggtttttgaccagattgggaacgattgtcctgaccttgaggatgttccatatctgaagcgagtgtttgagggagttcagggccttcttgacgatgaactgatctctgctggccatgatatcagtgatggtgggcttctggtctctgcccttgagatggcatttgctggaaattgtggcattaatttggacttgacttcgcaccataagagcctcttccaaacaattttttctgaagagcttggtctgattattgaggtgagcaagaaaaacttagatatggtaatgggaaagctaagcagtggaggtgtttctgcagagatgattggacaggtaactgccacaccttcaatagagttaaaggtggatggggtaactcatttgaacgaaagtacttcttttgtaagggacatgtgggaggatactagttttcagctggaaaaatttcagagattggcttcttgtgttgatctagagaaagaagggttgaaagataggcatgagccttcatggcagttgtcttttactccgtccttcacagatgaaaagtatatgaccacaacctccaaaccaaaggtggctgttattcgagaagaaggaagcaatggggatagagaaatggctgcggcattttatgctgctggctttgagccatgggatattacaatgtcagaccttcttaatggagctgtatcactgcaagagttccgtggaattgtgtttgttggaggctttagctatgctgatgtccttgattctgcaaaaggttggtctgcttcaattagatttaatcagccccttctgaatcaatttcaggagttttacaagaggcacgacactttcagtcttggcgtttgcaatgggtgtcagcttatggctcttttggggtgggtcccaggtcctcaagttgggggcgtgcatggtggtggtggggatccatcacagccgaggttcattcacaatgagtcaggccggtttgagtgtcgctttactagtgtaaaaattaaggactcaccatctataatgttaaaaggaatggaaggaagtaccttgggcgtgtgggctgcccatggtgagggaagagcctattttcctgatgatggtgtttttgatcgtgtgctccactccaagttggctccagtaagatattgtgatgatgatgggattgaaacggaactttatcccttcaacctgaatggctctcccttgggagttgcagcaatttgttcaccagatgggaggcatcttgccatgatgcctcatccagagcgctgcttcttaatgtggcagtatccatggtatcccaagcagtgggatgttgaaaagaaaggccctagtccatggctacggatgttccagaatgccagagagtggtgctccagaaatgatgcctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004642 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0007275 GO:0008144 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009555 GO:0009570 GO:0016874 GO:0016879 GO:0016884 GO:0017076 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:0055046 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

AIRS_C GATase_5

Protein Analysis

1437

Amino Acids

157.33

Weight (kDa)

5.38

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005762)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74260
fragaria_vesca	FvH4_5g19530 FvH4_5g19530 FvH4_5g19530
malus_domestica	MD03G1203100.v1.1 MD04G1022300.v1.1
prunus_persica	Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.1G542100_v2.0.a1 Prupe.8G024000_v2.0.a1 Prupe.8G024000_v2.0.a1 Prupe.8G024000_v2.0.a1
pyrus_communis	pycom04g01890 pycom04g01930
rosa_chinensis	RchiOBHm_Chr7g0204141
rosa_laevigata	RLG00000003485
rosa_multiflora	Rmu_sc0001311.1_g000031
rosa_roxburghii	Rroxscaffold_3G00253310
rosa_rugosa	Rorug07G0081100 Rorug07G0081200 Rorug07G0081200
rosa_samantha	Rh7AG211000 Rh7BG209600 Rh7CG223500 Rh7DG217800
rosa_wichuraiana	Rw7G018360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	130, 4230, 4290
AccBSI	CCGCTC	1 cut(s)	2248
AccI	GTMKAC	1 cut(s)	2367
AciI	CCGC	9 cut(s)	37, 205, 1582, 1716, 2248, 2347, 2627, 2893, 3545
AclWI	GGATC	6 cut(s)	1465, 2174, 2513, 2526, 3848, 3861
AcoI	YGGCCR	3 cut(s)	121, 2628, 3031
AcsI	RAATTY	7 cut(s)	107, 532, 1044, 1450, 1514, 2421, 3362
AcuI	CTGAAG	3 cut(s)	494, 2996, 3174
AcvI	CACGTG	1 cut(s)	1229
AfaI	GTAC	7 cut(s)	704, 840, 1779, 2211, 2803, 3313, 3967
AfeI	AGCGCT	1 cut(s)	4190
AflII	CTTAAG	2 cut(s)	497, 2309
AflIII	ACRYGT	2 cut(s)	1226, 3330
AhlI	ACTAGT	2 cut(s)	3344, 3911
AjiI	CACGTC	1 cut(s)	1756
AjnI	CCWGG	7 cut(s)	938, 1195, 1233, 1291, 2284, 2773, 3814
Alw21I	GWGCWC	4 cut(s)	250, 1100, 4041, 4298
Alw26I	GTCTC	4 cut(s)	509, 1250, 1295, 3067
AlwI	GGATC	6 cut(s)	1465, 2174, 2513, 2526, 3848, 3861
AlwNI	CAGNNNCTG	1 cut(s)	1026
Aor51HI	AGCGCT	1 cut(s)	4190
ApoI	RAATTY	7 cut(s)	107, 532, 1044, 1450, 1514, 2421, 3362
ArsI	GACNNNNNNTTYG	4 cut(s)	2821, 2853, 3674, 3706
AseI	ATTAAT	3 cut(s)	744, 888, 3102
Asp700I	GAANNNNTTC	3 cut(s)	229, 1348, 3363
AspLEI	GCGC	2 cut(s)	301, 4191
AsuC2I	CCSGG	1 cut(s)	1946
AvaII	GGWCC	5 cut(s)	152, 602, 733, 3811, 3818
BaeGI	GKGCMC	1 cut(s)	188
BalI	TGGCCA	2 cut(s)	123, 3033
BamHI	GGATCC	2 cut(s)	2518, 3853
BanII	GRGCYC	1 cut(s)	462
BauI	CACGAG	1 cut(s)	2262
BbrPI	CACGTG	1 cut(s)	1229
BbsI	GAAGAC	2 cut(s)	18, 624
Bbv12I	GWGCWC	4 cut(s)	250, 1100, 4041, 4298
BceAI	ACGGC	1 cut(s)	1522
BciT130I	CCWGG	7 cut(s)	940, 1197, 1235, 1293, 2286, 2775, 3816
BciVI	GTATCC	5 cut(s)	1452, 1532, 3334, 4221, 4230
BclI	TGATCA	2 cut(s)	1630, 2691
BcnI	CCSGG	1 cut(s)	1946
BcoDI	GTCTC	4 cut(s)	509, 1250, 1295, 3067
BcuI	ACTAGT	2 cut(s)	3344, 3911
BfaI	CTAG	7 cut(s)	477, 1485, 1545, 3345, 3392, 3912, 4254
BfmI	CTRYAG	5 cut(s)	1251, 1278, 2751, 2883, 3234
BfoI	RGCGCY	2 cut(s)	302, 4192
BfrI	CTTAAG	2 cut(s)	497, 2309
BfuI	GTATCC	5 cut(s)	1452, 1532, 3334, 4221, 4230
BglI	GCCNNNNNGGC	1 cut(s)	3430
BglII	AGATCT	1 cut(s)	922
BlpI	GCTNAGC	3 cut(s)	2137, 2394, 3215
BmcAI	AGTACT	2 cut(s)	2211, 3313
Bme1390I	CCNGG	8 cut(s)	940, 1197, 1235, 1293, 1946, 2286, 2775, 3816
Bme18I	GGWCC	5 cut(s)	152, 602, 733, 3811, 3818
BmgBI	CACGTC	1 cut(s)	1756
BmiI	GGNNCC	9 cut(s)	828, 1565, 2413, 2520, 2772, 3812, 3813, 3855, 4056
BmrFI	CCNGG	8 cut(s)	940, 1197, 1235, 1293, 1946, 2286, 2775, 3816
BmrI	ACTGGG	1 cut(s)	140
BmuI	ACTGGG	1 cut(s)	140
BpiI	GAAGAC	2 cut(s)	18, 624
BplI	GAGNNNNNCTC	2 cut(s)	4280, 4312
BpmI	CTGGAG	3 cut(s)	2493, 4041, 4282
Bpu10I	CCTNAGC	1 cut(s)	2919
Bpu1102I	GCTNAGC	3 cut(s)	2137, 2394, 3215
BpuEI	CTTGAG	6 cut(s)	234, 1132, 2222, 2978, 3092, 3807
BpuMI	CCSGG	1 cut(s)	1946
BsaAI	YACGTR	1 cut(s)	1229
BsaBI	GATNNNNATC	1 cut(s)	1940
BsaI	GGTCTC	2 cut(s)	1250, 3067
BsaXI	ACNNNNNCTCC	4 cut(s)	31, 61, 2748, 2778
Bse118I	RCCGGY	1 cut(s)	3891
Bse1I	ACTGG	9 cut(s)	38, 135, 1031, 1042, 1187, 1345, 2467, 2476, 4058
Bse3DI	GCAATG	5 cut(s)	765, 2535, 2694, 3529, 3784
Bse8I	GATNNNNATC	1 cut(s)	1940
BseBI	CCWGG	7 cut(s)	940, 1197, 1235, 1293, 2286, 2775, 3816
BseJI	GATNNNNATC	1 cut(s)	1940
BseMI	GCAATG	5 cut(s)	765, 2535, 2694, 3529, 3784
BseMII	CTCAG	7 cut(s)	158, 372, 429, 475, 2408, 2465, 2933
BseNI	ACTGG	9 cut(s)	38, 135, 1031, 1042, 1187, 1345, 2467, 2476, 4058
BseRI	GAGGAG	3 cut(s)	55, 86, 896
BseSI	GKGCMC	1 cut(s)	188
BseYI	CCCAGC	1 cut(s)	795
BsgI	GTGCAG	6 cut(s)	176, 419, 1317, 1329, 1632, 2016
BsiHKAI	GWGCWC	4 cut(s)	250, 1100, 4041, 4298
BsiSI	CCGG	2 cut(s)	1945, 3892
BslFI	GGGAC	6 cut(s)	338, 1340, 1859, 2127, 3341, 3797
BsmAI	GTCTC	4 cut(s)	509, 1250, 1295, 3067
BsmFI	GGGAC	6 cut(s)	338, 1340, 1859, 2127, 3341, 3797
BsmI	GAATGC	2 cut(s)	1866, 4285
Bso31I	GGTCTC	2 cut(s)	1250, 3067
Bsp1286I	GDGCHC	6 cut(s)	188, 250, 462, 1100, 4041, 4298
Bsp1407I	TGTACA	1 cut(s)	1777
Bsp1720I	GCTNAGC	3 cut(s)	2137, 2394, 3215
Bsp19I	CCATGG	6 cut(s)	2082, 2736, 3572, 3988, 4214, 4259
BspACI	CCGC	9 cut(s)	37, 205, 1582, 1716, 2248, 2347, 2627, 2893, 3545
BspCNI	CTCAG	7 cut(s)	157, 373, 430, 474, 2407, 2464, 2932
BspHI	TCATGA	2 cut(s)	766, 1870
BspLI	GGNNCC	9 cut(s)	828, 1565, 2413, 2520, 2772, 3812, 3813, 3855, 4056
BspMAI	CTGCAG	4 cut(s)	1255, 2755, 2887, 3238
BspPI	GGATC	6 cut(s)	1465, 2174, 2513, 2526, 3848, 3861
BspQI	GCTCTTC	3 cut(s)	1088, 3150, 3994
BspTI	CTTAAG	2 cut(s)	497, 2309
BspTNI	GGTCTC	2 cut(s)	1250, 3067
BsrBI	CCGCTC	1 cut(s)	2248
BsrDI	GCAATG	5 cut(s)	765, 2535, 2694, 3529, 3784
BsrFI	RCCGGY	1 cut(s)	3891
BsrGI	TGTACA	1 cut(s)	1777
BsrI	ACTGG	9 cut(s)	38, 135, 1031, 1042, 1187, 1345, 2467, 2476, 4058
BssAI	RCCGGY	1 cut(s)	3891
BssSI	CACGAG	1 cut(s)	2262
Bst2BI	CACGAG	1 cut(s)	2262
Bst2UI	CCWGG	7 cut(s)	940, 1197, 1235, 1293, 2286, 2775, 3816
Bst6I	CTCTTC	4 cut(s)	1088, 3140, 3150, 3994
BstAFI	CTTAAG	2 cut(s)	497, 2309
BstAPI	GCANNNNNTGC	3 cut(s)	1370, 2747, 3554
BstAUI	TGTACA	1 cut(s)	1777
BstBAI	YACGTR	1 cut(s)	1229
BstC8I	GCNNGC	8 cut(s)	188, 1022, 1107, 1670, 1831, 3031, 3562, 3836
BstDSI	CCRYGG	7 cut(s)	2082, 2736, 3572, 3628, 3988, 4214, 4259
BstENI	CCTNNNNNAGG	1 cut(s)	159
BstH2I	RGCGCY	2 cut(s)	302, 4192
BstHHI	GCGC	2 cut(s)	301, 4191
BstMAI	GTCTC	4 cut(s)	509, 1250, 1295, 3067
BstNI	CCWGG	7 cut(s)	940, 1197, 1235, 1293, 2286, 2775, 3816
BstNSI	RCATGY	3 cut(s)	1672, 2484, 3334
BstSCI	CCNGG	8 cut(s)	938, 1195, 1233, 1291, 1944, 2284, 2773, 3814
BstSFI	CTRYAG	5 cut(s)	1251, 1278, 2751, 2883, 3234
BstSLI	GKGCMC	1 cut(s)	188
BstV2I	GAAGAC	2 cut(s)	18, 624
BstX2I	RGATCY	4 cut(s)	922, 1470, 2518, 3853
BstXI	CCANNNNNNTGG	2 cut(s)	425, 1883
BstYI	RGATCY	4 cut(s)	922, 1470, 2518, 3853
BsuI	GTATCC	5 cut(s)	1452, 1532, 3334, 4221, 4230
BtgI	CCRYGG	7 cut(s)	2082, 2736, 3572, 3628, 3988, 4214, 4259
BtrI	CACGTC	1 cut(s)	1756
BtsI	GCAGTG	5 cut(s)	96, 449, 3226, 3614, 4235
Cac8I	GCNNGC	8 cut(s)	188, 1022, 1107, 1670, 1831, 3031, 3562, 3836
CaiI	CAGNNNCTG	1 cut(s)	1026
CciI	TCATGA	2 cut(s)	766, 1870
CfoI	GCGC	2 cut(s)	301, 4191
Cfr10I	RCCGGY	1 cut(s)	3891
CseI	GACGC	1 cut(s)	2693
Csp6I	GTAC	7 cut(s)	703, 839, 1778, 2210, 2802, 3312, 3966
CspCI	CAANNNNNGTGG	2 cut(s)	250, 285
CviQI	GTAC	7 cut(s)	703, 839, 1778, 2210, 2802, 3312, 3966
EaeI	YGGCCR	3 cut(s)	121, 2628, 3031
Eam1104I	CTCTTC	4 cut(s)	1088, 3140, 3150, 3994
EarI	CTCTTC	4 cut(s)	1088, 3140, 3150, 3994
EciI	GGCGGA	1 cut(s)	52
Eco147I	AGGCCT	1 cut(s)	2032
Eco24I	GRGCYC	1 cut(s)	462
Eco31I	GGTCTC	2 cut(s)	1250, 3067
Eco32I	GATATC	2 cut(s)	1942, 3040
Eco47I	GGWCC	5 cut(s)	152, 602, 733, 3811, 3818
Eco47III	AGCGCT	1 cut(s)	4190
Eco57I	CTGAAG	3 cut(s)	494, 2996, 3174
Eco72I	CACGTG	1 cut(s)	1229
EcoNI	CCTNNNNNAGG	1 cut(s)	159
EcoO109I	RGGNCCY	6 cut(s)	152, 1691, 3001, 3811, 3818, 4250
EcoRI	GAATTC	1 cut(s)	107
EcoRII	CCWGG	7 cut(s)	938, 1195, 1233, 1291, 2284, 2773, 3814
EcoRV	GATATC	2 cut(s)	1942, 3040
EcoT38I	GRGCYC	1 cut(s)	462
FaqI	GGGAC	6 cut(s)	338, 1340, 1859, 2127, 3341, 3797
FauI	CCCGC	2 cut(s)	198, 1575
FauNDI	CATATG	1 cut(s)	1218
FbaI	TGATCA	2 cut(s)	1630, 2691
FblI	GTMKAC	1 cut(s)	2367
FriOI	GRGCYC	1 cut(s)	462
FspBI	CTAG	7 cut(s)	477, 1485, 1545, 3345, 3392, 3912, 4254
GlaI	GCGC	2 cut(s)	300, 4190
GsaI	CCCAGC	1 cut(s)	799
GsuI	CTGGAG	3 cut(s)	2493, 4041, 4282
HaeII	RGCGCY	2 cut(s)	302, 4192
HapII	CCGG	2 cut(s)	1945, 3892
HgaI	GACGC	1 cut(s)	2693
HhaI	GCGC	2 cut(s)	301, 4191
Hin6I	GCGC	2 cut(s)	299, 4189
HinP1I	GCGC	2 cut(s)	299, 4189
HincII	GTYRAC	1 cut(s)	544
HindII	GTYRAC	1 cut(s)	544
HindIII	AAGCTT	4 cut(s)	485, 2233, 2633, 2843
HpaII	CCGG	2 cut(s)	1945, 3892
Hpy166II	GTNNAC	6 cut(s)	544, 618, 790, 1224, 2368, 4148
Hpy8I	GTNNAC	6 cut(s)	544, 618, 790, 1224, 2368, 4148
Hpy99I	CGWCG	1 cut(s)	26
HpyCH4IV	ACGT	5 cut(s)	841, 1228, 1755, 1899, 2116
HpySE526I	ACGT	5 cut(s)	841, 1228, 1755, 1899, 2116
HspAI	GCGC	2 cut(s)	299, 4189
KflI	GGGWCCC	1 cut(s)	3811
Ksp22I	TGATCA	2 cut(s)	1630, 2691
LguI	GCTCTTC	3 cut(s)	1088, 3150, 3994
MaeI	CTAG	7 cut(s)	477, 1485, 1545, 3345, 3392, 3912, 4254
MaeII	ACGT	5 cut(s)	841, 1228, 1755, 1899, 2116
MaeIII	GTNAC	9 cut(s)	676, 1229, 1850, 2039, 2377, 2581, 2827, 3253, 3292
MbiI	CCGCTC	1 cut(s)	2248
MfeI	CAATTG	2 cut(s)	1178, 1950
MflI	RGATCY	4 cut(s)	922, 1470, 2518, 3853
MhlI	GDGCHC	6 cut(s)	188, 250, 462, 1100, 4041, 4298
MlsI	TGGCCA	2 cut(s)	123, 3033
MluNI	TGGCCA	2 cut(s)	123, 3033
MlyI	GAGTC	3 cut(s)	673, 3893, 3923
MmeI	TCCRAC	6 cut(s)	848, 995, 1029, 2419, 2496, 3625
Mox20I	TGGCCA	2 cut(s)	123, 3033
MroXI	GAANNNNTTC	3 cut(s)	229, 1348, 3363
MscI	TGGCCA	2 cut(s)	123, 3033
MslI	CAYNNNNRTG	4 cut(s)	238, 1838, 2297, 3843
Msp20I	TGGCCA	2 cut(s)	123, 3033
MspA1I	CMGCKG	2 cut(s)	266, 3355
MspCI	CTTAAG	2 cut(s)	497, 2309
MspI	CCGG	2 cut(s)	1945, 3892
MspR9I	CCNGG	8 cut(s)	940, 1197, 1235, 1293, 1946, 2286, 2775, 3816
MunI	CAATTG	2 cut(s)	1178, 1950
Mva1269I	GAATGC	2 cut(s)	1866, 4285
MvaI	CCWGG	7 cut(s)	940, 1197, 1235, 1293, 2286, 2775, 3816
NciI	CCSGG	1 cut(s)	1946
NcoI	CCATGG	6 cut(s)	2082, 2736, 3572, 3988, 4214, 4259
NdeI	CATATG	1 cut(s)	1218
NlaIV	GGNNCC	9 cut(s)	828, 1565, 2413, 2520, 2772, 3812, 3813, 3855, 4056
NmeAIII	GCCGAG	1 cut(s)	3891
NmuCI	GTSAC	5 cut(s)	676, 1229, 2039, 2581, 2827
NspI	RCATGY	3 cut(s)	1672, 2484, 3334
PaeI	GCATGC	1 cut(s)	1672
PagI	TCATGA	2 cut(s)	766, 1870
PceI	AGGCCT	1 cut(s)	2032
PciI	ACATGT	1 cut(s)	3330
PciSI	GCTCTTC	3 cut(s)	1088, 3150, 3994
PcsI	WCGNNNNNNNCGW	1 cut(s)	1822
PctI	GAATGC	2 cut(s)	1866, 4285
PdmI	GAANNNNTTC	3 cut(s)	229, 1348, 3363
PfeI	GAWTC	8 cut(s)	967, 1320, 1390, 1427, 1531, 2289, 3674, 3724
PflMI	CCANNNNNTGG	3 cut(s)	130, 4230, 4290
PfoI	TCCNGGA	1 cut(s)	2773
PleI	GAGTC	3 cut(s)	673, 3892, 3923
PmaCI	CACGTG	1 cut(s)	1229
PmlI	CACGTG	1 cut(s)	1229
PpsI	GAGTC	3 cut(s)	673, 3892, 3923
Ppu21I	YACGTR	1 cut(s)	1229
PpuMI	RGGWCCY	3 cut(s)	152, 3811, 3818
PscI	ACATGT	1 cut(s)	3330
PshBI	ATTAAT	3 cut(s)	744, 888, 3102
Psp5II	RGGWCCY	3 cut(s)	152, 3811, 3818
Psp6I	CCWGG	7 cut(s)	938, 1195, 1233, 1291, 2284, 2773, 3814
PspCI	CACGTG	1 cut(s)	1229
PspFI	CCCAGC	1 cut(s)	795
PspGI	CCWGG	7 cut(s)	938, 1195, 1233, 1291, 2284, 2773, 3814
PspN4I	GGNNCC	9 cut(s)	828, 1565, 2413, 2520, 2772, 3812, 3813, 3855, 4056
PspPPI	RGGWCCY	3 cut(s)	152, 3811, 3818
PstI	CTGCAG	4 cut(s)	1255, 2755, 2887, 3238
PstNI	CAGNNNCTG	1 cut(s)	1026
PsuI	RGATCY	4 cut(s)	922, 1470, 2518, 3853
PvuII	CAGCTG	2 cut(s)	266, 3355
RsaI	GTAC	7 cut(s)	704, 840, 1779, 2211, 2803, 3313, 3967
RsaNI	GTAC	7 cut(s)	703, 839, 1778, 2210, 2802, 3312, 3966
RseI	CAYNNNNRTG	4 cut(s)	238, 1838, 2297, 3843
SapI	GCTCTTC	3 cut(s)	1088, 3150, 3994
ScaI	AGTACT	2 cut(s)	2211, 3313
SchI	GAGTC	3 cut(s)	673, 3893, 3923
ScrFI	CCNGG	8 cut(s)	940, 1197, 1235, 1293, 1946, 2286, 2775, 3816
SduI	GDGCHC	6 cut(s)	188, 250, 462, 1100, 4041, 4298
SfcI	CTRYAG	5 cut(s)	1251, 1278, 2751, 2883, 3234
SinI	GGWCC	5 cut(s)	152, 602, 733, 3811, 3818
SmiMI	CAYNNNNRTG	4 cut(s)	238, 1838, 2297, 3843
SmlI	CTYRAG	8 cut(s)	249, 497, 1147, 2201, 2309, 2957, 3071, 3822
SmoI	CTYRAG	8 cut(s)	249, 497, 1147, 2201, 2309, 2957, 3071, 3822
SpeI	ACTAGT	2 cut(s)	3344, 3911
SphI	GCATGC	1 cut(s)	1672
SseBI	AGGCCT	1 cut(s)	2032
SsiI	CCGC	9 cut(s)	37, 205, 1582, 1716, 2248, 2347, 2627, 2893, 3545
SspMI	CTAG	7 cut(s)	477, 1485, 1545, 3345, 3392, 3912, 4254
StuI	AGGCCT	1 cut(s)	2032
StyD4I	CCNGG	8 cut(s)	938, 1195, 1233, 1291, 1944, 2284, 2773, 3814
TaiI	ACGT	5 cut(s)	844, 1231, 1758, 1902, 2119
TaqI	TCGA	7 cut(s)	413, 647, 1730, 2190, 2244, 2360, 3508
TatI	WGTACW	4 cut(s)	1777, 2209, 2801, 3311
TauI	GCSGC	3 cut(s)	2630, 2896, 3548
TfiI	GAWTC	8 cut(s)	967, 1320, 1390, 1427, 1531, 2289, 3674, 3724
TseFI	GTSAC	5 cut(s)	676, 1229, 2039, 2581, 2827
Tsp45I	GTSAC	5 cut(s)	676, 1229, 2039, 2581, 2827
TspGWI	ACGGA	7 cut(s)	794, 979, 1200, 3438, 3617, 4106, 4282
Van91I	CCANNNNNTGG	3 cut(s)	130, 4230, 4290
Vha464I	CTTAAG	2 cut(s)	497, 2309
VpaK11BI	GGWCC	5 cut(s)	152, 602, 733, 3811, 3818
VspI	ATTAAT	3 cut(s)	744, 888, 3102
XagI	CCTNNNNNAGG	1 cut(s)	159
XapI	RAATTY	7 cut(s)	107, 532, 1044, 1450, 1514, 2421, 3362
XbaI	TCTAGA	1 cut(s)	3391
XceI	RCATGY	3 cut(s)	1672, 2484, 3334
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1231, 1883, 3493
XmiI	GTMKAC	1 cut(s)	2367
XmnI	GAANNNNTTC	3 cut(s)	229, 1348, 3363
XspI	CTAG	7 cut(s)	477, 1485, 1545, 3345, 3392, 3912, 4254
ZrmI	AGTACT	2 cut(s)	2211, 3313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.