Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0008076

Physical Location & Seq

Genomic Coordinates Reverse (-)

7943686 .. 7947346

Gene Structure 3661 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1054200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGAAGCTTGTCACCTTCTTCCAGAGATCTCTGGTCCAGCAACTCATCCTAAGATTGCACAAGTACTTTTAGAAAGGGGAAATCCTGATACAGCTCTTTTGGTTTTACGATGGTCCGGGCGTGATGGTACCTCAAAGTCAATATCACTTACTGAGGCTGTTACTGCAGTTCGGGTGAGGGTAGAGTGTGGACTTTTTACCGAAGCATTTATACATCAAAGAATGCTGTGTACCAAAGTCAAGGAGAAGAAGTTGAAGCTTGGAGAATTGGGGGATGCAACAGATGATTCAAAAAGCAAATATAGGAGTTGGGAGGACTGGGTGGAGATATTGGTTAATGAAATTTGTTTCCTCTGTATACGAAGGAACATGGTAGACCGAGTGATAGAGTTGCCTTGGAACTCTGATGAAGAGAAACATCTCCACAAGTGCCTGTTAGATTATACTATTGATGATCCTTCCTCAACTATTGGAAGCCTTCTTGTCGTATTCTACATTCAGCGGTACCGGTACTTTGAAGCTTACCAAGTTGATCAAATACTTAAAAACCTGGAGGAGGAGTTCATTTCAAAGAATTCTGTCAGTGAAGAAGTTTTATCTAGAATGAGATCAATGAGCGGATGGAGAGCTGGATTAATAGATAAAAGCCTGGAGTTGCTACCTGAAGTCCAACGACAAGAAGTAAAGTCTGGAAAGTTTCCTGAGGTAGCTGTTACCACCTCTAGGGAAGTTGAAGTGGCACCAGCATCACTTCCTGAAGTGCAAGAATCACAATCAACTAGTATGCTGATTCCTTCGTCCATTGATTCTTCTCTTGCTTTATGGTCAGATCGTATGAATCCTTCCTGGAAACCGTCAATATCTGAAACGGCCAAGAAAAGAGTTGGGTTGGTTGACAGTTATCGCTCTGAACTTGGTAACAATGGTTCTTCAGTTCTTCATGGGAAGTTACTTAGCAATTCTGAAACGCGATGGAAGCCTGATGATAGCATAAACAAAATTTTCAACTTTGAGGATGCATCAACTCCTGGAATTCATTGGGCTACTCCCCCCTCAGCAGTTAAGGATGGGAACAGAAGTTCATCAAAAGTACATTCAAATAGCCGTCTCCAAGACAATCAATATGCTAGAATGTCACCAGAAATGGAATGGAACAAGCGGTTCAACCCATTCCAAAATACAAGTCCTTCAAAATTTTACAGCGCTGATTCTAATCCAGTAACTACACCCAGCAGCAACCGTGGCCTGTTTAAAGATTCCGCAACAGATCTGCATCGGAGTGTGAACAGTAAGGGGTTCCAGCGAGCCAGGGATGACCGAACTTGGAATATGGTTTCCAAGGATGACCCAATGGACGTTTCTTTGAGCTATGGAGAAAAGGGTCATGTAATTGAGGACGAAAACTTGAACAATGGACCGAGATGGAGGTCTGATGAAACTAGTGACGAGGAACAGGAGCAGAGTCCAGAGAAGGCCATTGGGATCACACATCATGCTTCTACCGCGAGGTGTTTACAAAGAAGGAGGTTTTCCAAGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0022414 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELYS

Protein Analysis

514

Amino Acids

58.24

Weight (kDa)

6.24

Isoelectric Point (pI)

55.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ELYS	PF13934	2 - 147	2e-18	Nuclear pore complex assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39810 AT2G39810
fragaria_vesca	FvH4_5g19540 FvH4_5g19540 FvH4_5g19540 FvH4_5g19540
malus_domestica	MD04G1060900.v1.1 MD06G1054200.v1.1
prunus_persica	Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1
pyrus_communis	pycom04g05480 pycom06g04560
rosa_chinensis	RchiOBHm_Chr7g0204151
rosa_laevigata	RLG00000003484
rosa_multiflora	Rmu_sc0001311.1_g000032
rosa_roxburghii	Rroxscaffold_3G00253300
rosa_rugosa	Rorug07G0081200
rosa_samantha	Rh7AG211100 Rh7BG209700 Rh7CG223600 Rh7DG217900
rosa_wichuraiana	Rw7G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	128, 504
AccB1I	GGYRCC	3 cut(s)	128, 504, 739
AccBSI	CCGCTC	1 cut(s)	618
AccI	GTMKAC	2 cut(s)	358, 375
AccII	CGCG	2 cut(s)	970, 1505
AciI	CCGC	5 cut(s)	502, 618, 1159, 1260, 1503
AclWI	GGATC	2 cut(s)	449, 1490
AcoI	YGGCCR	1 cut(s)	870
AcsI	RAATTY	5 cut(s)	342, 574, 999, 1032, 1193
AcuI	CTGAAG	3 cut(s)	684, 777, 915
AfaI	GTAC	6 cut(s)	66, 130, 232, 506, 512, 1092
AfeI	AGCGCT	1 cut(s)	1204
AfiI	CCNNNNNNNGG	2 cut(s)	556, 723
AgeI	ACCGGT	1 cut(s)	507
AhlI	ACTAGT	2 cut(s)	779, 1439
AjnI	CCWGG	5 cut(s)	549, 648, 845, 1027, 1307
AjuI	GAANNNNNNNTTGG	2 cut(s)	1342, 1374
AloI	GAACNNNNNNTCC	4 cut(s)	545, 577, 1063, 1095
AluBI	AGCT	7 cut(s)	8, 95, 259, 521, 629, 710, 1368
AluI	AGCT	7 cut(s)	8, 95, 259, 521, 629, 710, 1368
Alw26I	GTCTC	1 cut(s)	1112
AlwI	GGATC	2 cut(s)	449, 1490
Aor51HI	AGCGCT	1 cut(s)	1204
AoxI	GGCC	3 cut(s)	870, 1243, 1473
ApeKI	GCWGC	1 cut(s)	1233
ApoI	RAATTY	5 cut(s)	342, 574, 999, 1032, 1193
ArsI	GACNNNNNNTTYG	2 cut(s)	1168, 1200
AseI	ATTAAT	1 cut(s)	635
AsiGI	ACCGGT	1 cut(s)	507
Asp718I	GGTACC	2 cut(s)	128, 504
AspLEI	GCGC	1 cut(s)	1205
AspS9I	GGNCC	3 cut(s)	35, 114, 1415
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	3 cut(s)	5, 187, 1128
AvaII	GGWCC	3 cut(s)	35, 114, 1415
AxyI	CCTNAGG	1 cut(s)	702
BanI	GGYRCC	3 cut(s)	128, 504, 739
BarI	GAAGNNNNNNTAC	4 cut(s)	195, 227, 826, 858
BbvCI	CCTCAGC	1 cut(s)	1054
BbvI	GCAGC	1 cut(s)	1245
BccI	CCATC	6 cut(s)	105, 119, 615, 966, 1061, 1416
BceAI	ACGGC	2 cut(s)	885, 1089
BciT130I	CCWGG	5 cut(s)	551, 650, 847, 1029, 1309
BclI	TGATCA	1 cut(s)	532
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	1 cut(s)	1112
BcuI	ACTAGT	2 cut(s)	779, 1439
BfaI	CTAG	5 cut(s)	600, 723, 780, 1128, 1440
BfmI	CTRYAG	1 cut(s)	165
BfoI	RGCGCY	1 cut(s)	1206
BglII	AGATCT	2 cut(s)	27, 1267
BisI	GCNGC	1 cut(s)	1234
BlsI	GCNGC	1 cut(s)	1235
BmcAI	AGTACT	1 cut(s)	66
Bme1390I	CCNGG	6 cut(s)	118, 551, 650, 847, 1029, 1309
Bme18I	GGWCC	3 cut(s)	35, 114, 1415
BmgT120I	GGNCC	3 cut(s)	35, 114, 1415
BmiI	GGNNCC	4 cut(s)	130, 506, 741, 1298
BmrFI	CCNGG	6 cut(s)	118, 551, 650, 847, 1029, 1309
BmrI	ACTGGG	1 cut(s)	328
BmsI	GCATC	5 cut(s)	265, 755, 1006, 1028, 1282
BmuI	ACTGGG	1 cut(s)	328
BpmI	CTGGAG	2 cut(s)	572, 671
Bpu10I	CCTNAGC	1 cut(s)	1054
BpuMI	CCSGG	1 cut(s)	118
BsaBI	GATNNNNATC	2 cut(s)	1212, 1272
BsaJI	CCNNGG	4 cut(s)	395, 1240, 1308, 1338
BsaWI	WCCGGW	1 cut(s)	507
BsaXI	ACNNNNNCTCC	4 cut(s)	236, 266, 545, 575
Bsc4I	CCNNNNNNNGG	2 cut(s)	556, 723
Bse118I	RCCGGY	1 cut(s)	507
Bse1I	ACTGG	2 cut(s)	323, 1217
Bse21I	CCTNAGG	1 cut(s)	702
Bse8I	GATNNNNATC	2 cut(s)	1212, 1272
BseBI	CCWGG	5 cut(s)	551, 650, 847, 1029, 1309
BseDI	CCNNGG	4 cut(s)	395, 1240, 1308, 1338
BseGI	GGATG	7 cut(s)	46, 280, 626, 1021, 1072, 1318, 1348
BseJI	GATNNNNATC	2 cut(s)	1212, 1272
BseLI	CCNNNNNNNGG	2 cut(s)	556, 723
BseMII	CTCAG	3 cut(s)	144, 693, 1068
BseNI	ACTGG	2 cut(s)	323, 1217
BseRI	GAGGAG	2 cut(s)	569, 572
BseXI	GCAGC	1 cut(s)	1245
BseYI	CCCAGC	1 cut(s)	1229
Bsh1236I	CGCG	2 cut(s)	970, 1505
BshFI	GGCC	3 cut(s)	872, 1245, 1475
BshNI	GGYRCC	3 cut(s)	128, 504, 739
BshTI	ACCGGT	1 cut(s)	507
BsiSI	CCGG	2 cut(s)	117, 508
BslI	CCNNNNNNNGG	2 cut(s)	556, 723
BsmAI	GTCTC	1 cut(s)	1112
BsmBI	CGTCTC	1 cut(s)	1112
BsmI	GAATGC	1 cut(s)	228
BsnI	GGCC	3 cut(s)	872, 1245, 1475
Bsp143I	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
BspACI	CCGC	5 cut(s)	502, 618, 1159, 1260, 1503
BspANI	GGCC	3 cut(s)	872, 1245, 1475
BspCNI	CTCAG	3 cut(s)	145, 694, 1067
BspFNI	CGCG	2 cut(s)	970, 1505
BspLI	GGNNCC	4 cut(s)	130, 506, 741, 1298
BspMAI	CTGCAG	1 cut(s)	169
BspPI	GGATC	2 cut(s)	449, 1490
BspT107I	GGYRCC	3 cut(s)	128, 504, 739
BsrBI	CCGCTC	1 cut(s)	618
BsrFI	RCCGGY	1 cut(s)	507
BsrI	ACTGG	2 cut(s)	323, 1217
BssAI	RCCGGY	1 cut(s)	507
BssECI	CCNNGG	4 cut(s)	395, 1240, 1308, 1338
BssMI	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
BssNAI	GTATAC	1 cut(s)	359
BssT1I	CCWWGG	2 cut(s)	395, 1338
Bst1107I	GTATAC	1 cut(s)	359
Bst2UI	CCWGG	5 cut(s)	551, 650, 847, 1029, 1309
Bst4CI	ACNGT	4 cut(s)	855, 899, 1241, 1289
Bst6I	CTCTTC	1 cut(s)	405
BstC8I	GCNNGC	1 cut(s)	1305
BstDEI	CTNAG	5 cut(s)	51, 153, 702, 953, 1054
BstDSI	CCRYGG	1 cut(s)	1240
BstENI	CCTNNNNNAGG	1 cut(s)	554
BstF5I	GGATG	7 cut(s)	46, 280, 626, 1021, 1072, 1318, 1348
BstFNI	CGCG	2 cut(s)	970, 1505
BstH2I	RGCGCY	1 cut(s)	1206
BstHHI	GCGC	1 cut(s)	1205
BstKTI	GATC	7 cut(s)	30, 457, 535, 611, 832, 1270, 1485
BstMAI	GTCTC	1 cut(s)	1112
BstMBI	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
BstMWI	GCNNNNNNNGC	4 cut(s)	164, 976, 1242, 1502
BstNI	CCWGG	5 cut(s)	551, 650, 847, 1029, 1309
BstSCI	CCNGG	6 cut(s)	116, 549, 648, 845, 1027, 1307
BstSFI	CTRYAG	1 cut(s)	165
BstUI	CGCG	2 cut(s)	970, 1505
BstV1I	GCAGC	1 cut(s)	1245
BstX2I	RGATCY	2 cut(s)	27, 1267
BstYI	RGATCY	2 cut(s)	27, 1267
BstZ17I	GTATAC	1 cut(s)	359
Bsu36I	CCTNAGG	1 cut(s)	702
BsuRI	GGCC	3 cut(s)	872, 1245, 1475
BtgI	CCRYGG	1 cut(s)	1240
BtgZI	GCGATG	1 cut(s)	985
BtsCI	GGATG	7 cut(s)	46, 280, 626, 1021, 1072, 1318, 1348
BtsIMutI	CAGTG	1 cut(s)	589
Cac8I	GCNNGC	1 cut(s)	1305
CfoI	GCGC	1 cut(s)	1205
Cfr10I	RCCGGY	1 cut(s)	507
Cfr13I	GGNCC	3 cut(s)	35, 114, 1415
Csp6I	GTAC	6 cut(s)	65, 129, 231, 505, 511, 1091
CspAI	ACCGGT	1 cut(s)	507
CviAII	CATG	4 cut(s)	370, 941, 1385, 1493
CviQI	GTAC	6 cut(s)	65, 129, 231, 505, 511, 1091
DdeI	CTNAG	5 cut(s)	51, 153, 702, 953, 1054
DpnI	GATC	7 cut(s)	29, 456, 534, 610, 831, 1269, 1484
DpnII	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
DraI	TTTAAA	1 cut(s)	1252
EaeI	YGGCCR	1 cut(s)	870
Eam1104I	CTCTTC	1 cut(s)	405
EarI	CTCTTC	1 cut(s)	405
Eco130I	CCWWGG	2 cut(s)	395, 1338
Eco47I	GGWCC	3 cut(s)	35, 114, 1415
Eco47III	AGCGCT	1 cut(s)	1204
Eco57I	CTGAAG	3 cut(s)	684, 777, 915
Eco81I	CCTNAGG	1 cut(s)	702
EcoNI	CCTNNNNNAGG	1 cut(s)	554
EcoRI	GAATTC	2 cut(s)	574, 1032
EcoRII	CCWGG	5 cut(s)	549, 648, 845, 1027, 1307
EcoT14I	CCWWGG	2 cut(s)	395, 1338
EcoT22I	ATGCAT	1 cut(s)	1021
ErhI	CCWWGG	2 cut(s)	395, 1338
Esp3I	CGTCTC	1 cut(s)	1112
FaeI	CATG	4 cut(s)	373, 944, 1388, 1496
FatI	CATG	4 cut(s)	369, 940, 1384, 1492
FbaI	TGATCA	1 cut(s)	532
FblI	GTMKAC	2 cut(s)	358, 375
Fnu4HI	GCNGC	1 cut(s)	1234
FokI	GGATG	7 cut(s)	33, 287, 633, 1028, 1079, 1325, 1355
Fsp4HI	GCNGC	1 cut(s)	1234
FspBI	CTAG	5 cut(s)	600, 723, 780, 1128, 1440
GlaI	GCGC	1 cut(s)	1204
GluI	GCNGC	1 cut(s)	1234
GsaI	CCCAGC	1 cut(s)	1233
GsuI	CTGGAG	2 cut(s)	572, 671
HaeII	RGCGCY	1 cut(s)	1206
HaeIII	GGCC	3 cut(s)	872, 1245, 1475
HapII	CCGG	2 cut(s)	117, 508
HhaI	GCGC	1 cut(s)	1205
Hin1II	CATG	4 cut(s)	373, 944, 1388, 1496
Hin6I	GCGC	1 cut(s)	1203
HinP1I	GCGC	1 cut(s)	1203
HincII	GTYRAC	1 cut(s)	895
HindII	GTYRAC	1 cut(s)	895
HindIII	AAGCTT	3 cut(s)	6, 257, 519
HinfI	GANTC	8 cut(s)	287, 767, 790, 806, 838, 1208, 1256, 1462
HpaII	CCGG	2 cut(s)	117, 508
HphI	GGTGA	3 cut(s)	5, 187, 1128
Hpy166II	GTNNAC	7 cut(s)	191, 231, 359, 376, 895, 1285, 1514
Hpy188I	TCNGA	7 cut(s)	406, 829, 865, 910, 964, 1278, 1432
Hpy188III	TCNNGA	7 cut(s)	23, 86, 600, 690, 701, 755, 1466
Hpy8I	GTNNAC	7 cut(s)	191, 231, 359, 376, 895, 1285, 1514
HpyAV	CCTTC	9 cut(s)	26, 357, 468, 488, 804, 852, 1197, 1465, 1515
HpyCH4III	ACNGT	4 cut(s)	855, 899, 1241, 1289
HpyCH4IV	ACGT	1 cut(s)	1356
HpyCH4V	TGCA	6 cut(s)	59, 167, 278, 763, 1019, 1273
HpyF10VI	GCNNNNNNNGC	4 cut(s)	164, 976, 1242, 1502
HpyF3I	CTNAG	5 cut(s)	51, 153, 702, 953, 1054
HpySE526I	ACGT	1 cut(s)	1356
Hsp92II	CATG	4 cut(s)	373, 944, 1388, 1496
HspAI	GCGC	1 cut(s)	1203
KpnI	GGTACC	2 cut(s)	132, 508
Ksp22I	TGATCA	1 cut(s)	532
Kzo9I	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
LmnI	GCTCC	1 cut(s)	1456
Lsp1109I	GCAGC	1 cut(s)	1245
LweI	GCATC	5 cut(s)	265, 755, 1006, 1028, 1282
MaeI	CTAG	5 cut(s)	600, 723, 780, 1128, 1440
MaeII	ACGT	1 cut(s)	1356
MaeIII	GTNAC	8 cut(s)	11, 160, 712, 917, 948, 1134, 1219, 1442
MalI	GATC	7 cut(s)	29, 456, 534, 610, 831, 1269, 1484
MbiI	CCGCTC	1 cut(s)	618
MboI	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
MboII	GAAGA	7 cut(s)	11, 259, 422, 599, 801, 921, 929
MflI	RGATCY	2 cut(s)	27, 1267
MluCI	AATT	8 cut(s)	266, 342, 574, 958, 999, 1032, 1193, 1389
MlyI	GAGTC	1 cut(s)	1471
MmeI	TCCRAC	1 cut(s)	694
Mph1103I	ATGCAT	1 cut(s)	1021
MseI	TTAA	5 cut(s)	336, 543, 635, 1062, 1251
MslI	CAYNNNNRTG	1 cut(s)	1278
MspA1I	CMGCKG	1 cut(s)	502
MspI	CCGG	2 cut(s)	117, 508
MspR9I	CCNGG	6 cut(s)	118, 551, 650, 847, 1029, 1309
Mva1269I	GAATGC	1 cut(s)	228
MvaI	CCWGG	5 cut(s)	551, 650, 847, 1029, 1309
MvnI	CGCG	2 cut(s)	970, 1505
MwoI	GCNNNNNNNGC	4 cut(s)	164, 976, 1242, 1502
NciI	CCSGG	1 cut(s)	118
NdeII	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
NlaIII	CATG	4 cut(s)	373, 944, 1388, 1496
NlaIV	GGNNCC	4 cut(s)	130, 506, 741, 1298
NmuCI	GTSAC	3 cut(s)	11, 1134, 1442
NsiI	ATGCAT	1 cut(s)	1021
PctI	GAATGC	1 cut(s)	228
PfeI	GAWTC	7 cut(s)	287, 767, 790, 806, 838, 1208, 1256
PfoI	TCCNGGA	2 cut(s)	845, 1027
PinAI	ACCGGT	1 cut(s)	507
PkrI	GCNGC	1 cut(s)	1235
PleI	GAGTC	1 cut(s)	1470
PpsI	GAGTC	1 cut(s)	1470
PshBI	ATTAAT	1 cut(s)	635
Psp6I	CCWGG	5 cut(s)	549, 648, 845, 1027, 1307
PspFI	CCCAGC	1 cut(s)	1229
PspGI	CCWGG	5 cut(s)	549, 648, 845, 1027, 1307
PspN4I	GGNNCC	4 cut(s)	130, 506, 741, 1298
PspPI	GGNCC	3 cut(s)	35, 114, 1415
PsrI	GAACNNNNNNTAC	2 cut(s)	910, 942
PstI	CTGCAG	1 cut(s)	169
PsuI	RGATCY	2 cut(s)	27, 1267
RsaI	GTAC	6 cut(s)	66, 130, 232, 506, 512, 1092
RsaNI	GTAC	6 cut(s)	65, 129, 231, 505, 511, 1091
RseI	CAYNNNNRTG	1 cut(s)	1278
SaqAI	TTAA	5 cut(s)	336, 543, 635, 1062, 1251
SatI	GCNGC	1 cut(s)	1234
Sau3AI	GATC	7 cut(s)	27, 454, 532, 608, 829, 1267, 1482
Sau96I	GGNCC	3 cut(s)	35, 114, 1415
ScaI	AGTACT	1 cut(s)	66
SchI	GAGTC	1 cut(s)	1471
ScrFI	CCNGG	6 cut(s)	118, 551, 650, 847, 1029, 1309
SfaNI	GCATC	5 cut(s)	265, 755, 1006, 1028, 1282
SfcI	CTRYAG	1 cut(s)	165
SinI	GGWCC	3 cut(s)	35, 114, 1415
SmiMI	CAYNNNNRTG	1 cut(s)	1278
SpeI	ACTAGT	2 cut(s)	779, 1439
Sse9I	AATT	8 cut(s)	266, 342, 574, 958, 999, 1032, 1193, 1389
SsiI	CCGC	5 cut(s)	502, 618, 1159, 1260, 1503
SspMI	CTAG	5 cut(s)	600, 723, 780, 1128, 1440
StyD4I	CCNGG	6 cut(s)	116, 549, 648, 845, 1027, 1307
StyI	CCWWGG	2 cut(s)	395, 1338
TaaI	ACNGT	4 cut(s)	855, 899, 1241, 1289
TaiI	ACGT	1 cut(s)	1359
TaqII	GACCGA	3 cut(s)	393, 1332, 1432
TasI	AATT	8 cut(s)	266, 342, 574, 958, 999, 1032, 1193, 1389
TatI	WGTACW	2 cut(s)	64, 1090
TfiI	GAWTC	7 cut(s)	287, 767, 790, 806, 838, 1208, 1256
Tru1I	TTAA	5 cut(s)	336, 543, 635, 1062, 1251
Tru9I	TTAA	5 cut(s)	336, 543, 635, 1062, 1251
TscAI	CASTG	1 cut(s)	589
TseFI	GTSAC	3 cut(s)	11, 1134, 1442
TseI	GCWGC	1 cut(s)	1233
Tsp45I	GTSAC	3 cut(s)	11, 1134, 1442
TspDTI	ATGAA	8 cut(s)	354, 423, 553, 851, 929, 1025, 1071, 1449
TspRI	CASTG	1 cut(s)	589
VpaK11BI	GGWCC	3 cut(s)	35, 114, 1415
VspI	ATTAAT	1 cut(s)	635
XagI	CCTNNNNNAGG	1 cut(s)	554
XapI	RAATTY	5 cut(s)	342, 574, 999, 1032, 1193
XbaI	TCTAGA	1 cut(s)	599
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1146
XmiI	GTMKAC	2 cut(s)	358, 375
XspI	CTAG	5 cut(s)	600, 723, 780, 1128, 1440
ZrmI	AGTACT	1 cut(s)	66
Zsp2I	ATGCAT	1 cut(s)	1021

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.