Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008076

Physical Location & Seq

Genomic Coordinates Forward (+)

49066998 .. 49073150

Gene Structure 6153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003484

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ATGGATAGGAGATTCAACGGGCCAACCGGAGCTTCGAGCTCCGTGATCAATGGCGGCATAGCCACAAGATCTGGTTCTCACACTCTGCAACCTAACTACAATAGTCACGCCGTTCAGGAAGCATTGGAACATTTAGCATCTATTGATCTGATTGAGTTATGTAATGAGGCTAAAGTCGAGCACTGTCGGGCAACAAGAGACTTGAGAAGCTGTGGGCGTTATGTAACGGATGTTTTGAAATCATGTGGACATGCTTCATTATGTGCAGAGTGTAGCCAGCGCTGTGATGTTTGCCCAATTTGTAGAATTCCAATTCTAAAGAATGGACCAAAGCTACGTCGCCGCCTTTACGATCAGTGTTCTGAAGCTCGCCTTATATCTAAAAGAAGTGATAAGAGATTTCAAGAGAAAGAGGATGGGGAGGAGCCGATAACTAATGATGTCCTACGCCTTTATTCTTTATTTGACGTTGCCCTGGAGAATAACTTAGTTTCATTGATATGCCACTATGTTACAGATGTTTGTTTGGATGAAAGTGCTGTGTCCAGTGATCCTGTTATTGCCTTTTTGTTGGATGAGGTGGTCGTTAAGGATTGGTGCAAGCGAGCATTCCAGAACATCATCACAGAACTTCAAGTGATCTATAATCTTGAAGCAGAACAGATGAAAACTATGTTGGGCTTACTTCTTAAGTTCTCAGCACAGTTGGCCGGCATATCTAACGTGCTTGAAGTTTTGGATTCATCTTTTAAGGGGTCTCTTTCATCTCAGCTTCATGACTTGCACCAACTTCTAGAAAACATATTAAAGACAAAGCAGCATATGGAGGTTATGATATGGTGCATACGACATGAGTTCCTTGAGAATGTGAAGCCTCGTCATAGTGAAATCACACCATGGCGTACTCTTGTCCGTGAAAGGAAATCAGCTGCAGTTAAGCGTTCATGGCCTGATGCATTAAATAACTCTGAAGAGTCCAGTGGACAGGAAGGTTCCCTGTTTATTGAAGATGCTCTAACAAATCTGGAGACTGAGCAAGGAAATACAATGATAGAGGAGTTGAAACTTGCATTTGCACAGAAGGACGGTCGTTCATCTGTTTACAGGTCTAAGATTGAAGGGATTAGAGGTTGTTATCCATTTGAAAATGTTCGAGCTGCTGTTGATATACTTTTTCTTTGTGGTAGTTCAGATTTGGTTGTTGCAAAGCAAGCAACTTTTCTATATTATCTATATGATCGGCATTGGACGCTGCCTGATGAGGACTGGAGACACATTCTAGAGGACTTTGGAGCTACCTTTGGTATCTCCAGGAATTTATTACTTGAATCCTTAATCTTTTATCTCTTGGATGATCACACAGATGAGGCTCTGCAGGAAGCTTGTCATCTACTTCCAGAGATCTCAGGCCCAGCGACTCATCCTAAGATTGCACAAGTACTACTAGAAAGGGGAAATCCTGATACTGCTCTTTCGGTTTTACGGTGGTCAGGGCGTGATGGTACTTCAAAGTCCATTTCACTTAGTGAGGCTGTAACTGCAGTTCGGGTGAGGGTAGAGTGTGGACTCTTTACCGAAGCATTCTTACATCAAAGAATGCTGTGCACCAAAGTCAAGGAGAAGAAGTTGAAGATTGGTCAATTAGGGGGTGTGACTGATGATTCAAATGACAGATATAAGTGGGAGGACTGGGTGGAGATATTGGTTTCTGAAATTTGTTTCCTTTGTATTCGACGGAACATGGTGGATAGAATGATAGAGTTGCCGTGGAACTCCAGTGAAGAGAATCATCTCCGCAAATGTCTCTTAGATTATGCTATGGGTGATTCTTCCTCAACTATTGGAAGCCTTCTTGTGGTATTTTATATCCAGCGCTACAGGTATTCTGAAGCTTACCAAGTTGATCAAATACTTAAAAACTTGGAGCTGGAGTTCATCTCAAAGAATTCTGTCGGTGAAGAAGTTTTATCTAGAATGAAATCAGTGAGTGGCTGGAGAGCTGGGTTAATTGATAAATGCATGGACTTGCTACCAGAAGTCCAACGCCAACAAGTGAAGGATGGAAAAGTGCCTGAGATAGCGGCCACCTCCTCTAGTGATGCAGAAATGTTAGCAACATCTTCTCTTCCTGAGGGGCAAGAATCAAAGTCAACTAGTTTACTGATTCCTTCATCCATTGATTCTTCTGTTGCACCATGGACGGATCAAAAGAATTCTTCCTGGAAACCAGCAATATCTGAAACCCCTAAAAAAAGAGGTGGATTGGTTGGCAGCTACCGCTCCGAACTTGGTAACTTTAGTTCTTCAGTTCTGCACGGAAGGTTATTTACCAATTCTGAAACAAGATTAAAGGCTGACATTAGTCTAAACAAGACTTTCAATTTTGAGGATGCATCAACTCCCCTTAGTCATCGAGCTAGTCCTGCCTCAGCAGCTAGGGACATGAATAGAAGTTCATCAAAGTTATTTTCAAATAACTGTCTCCGCAACAATCAATATGGTACATTGTCACCAGAAATGGAACAGGACGTGTTTCTCACTCCGTTCCAAACATTCCAAAATACAAGTCCTTCACACTACCAAAGGGTTACTACAAATCCGGTAACTACAACTAGCAGCAACAATGGTTTGTTTGAAGATTCTGCAAAGAACCTACATCCAAATTTGTCTAGTAAGGGTTTCCTAATGGCTAGGGATGTTAGACCTTGGCATACAGCTTCCAAGGATGATCCAATGGACACATCCTTGAGCTATGGAGCTGAGGACAAAATTCTGAACAATGGAGCAAGATGGAGGTCTGACGAAACTAGTGATGAGGAAGATAAGCAGAGTCAAGAGAAAGCATTTGGGATTATTAATCATACCCCCACAACAAGGGGAGTTCGTAGAAGAAGATTTTCCAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0022414 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELYS

Protein Analysis

970

Amino Acids

109.23

Weight (kDa)

5.96

Isoelectric Point (pI)

51.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ELYS	PF13934	333 - 604	8.4e-38	Nuclear pore complex assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39810 AT2G39810
fragaria_vesca	FvH4_5g19540 FvH4_5g19540 FvH4_5g19540 FvH4_5g19540
malus_domestica	MD04G1060900.v1.1 MD06G1054200.v1.1
prunus_persica	Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1
pyrus_communis	pycom04g05480 pycom06g04560
rosa_chinensis	RchiOBHm_Chr7g0204151
rosa_laevigata	RLG00000003484
rosa_multiflora	Rmu_sc0001311.1_g000032
rosa_roxburghii	Rroxscaffold_3G00253300
rosa_rugosa	Rorug07G0081200
rosa_samantha	Rh7AG211100 Rh7BG209700 Rh7CG223600 Rh7DG217900
rosa_wichuraiana	Rw7G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	2280
AciI	CCGC	6 cut(s)	54, 343, 1795, 2081, 2278, 2485
AclWI	GGATC	3 cut(s)	545, 2211, 2723
AcoI	YGGCCR	2 cut(s)	708, 2082
AcsI	RAATTY	7 cut(s)	306, 1315, 1713, 1945, 2212, 2662, 2769
AcuI	CTGAAG	4 cut(s)	384, 990, 1908, 2289
AdeI	CACNNNGTG	1 cut(s)	1526
AfaI	GTAC	4 cut(s)	904, 1440, 1504, 2503
AfeI	AGCGCT	2 cut(s)	281, 1874
AfiI	CCNNNNNNNGG	2 cut(s)	1855, 2874
AflII	CTTAAG	1 cut(s)	689
AflIII	ACRYGT	1 cut(s)	2529
AhlI	ACTAGT	2 cut(s)	2153, 2807
AjiI	CACGTC	1 cut(s)	2530
AjnI	CCWGG	3 cut(s)	474, 1310, 2219
AjuI	GAANNNNNNNTTGG	4 cut(s)	16, 48, 659, 691
AloI	GAACNNNNNNTCC	2 cut(s)	1916, 1948
Alw21I	GWGCWC	3 cut(s)	41, 183, 1607
Alw26I	GTCTC	6 cut(s)	192, 762, 1022, 1264, 1808, 2486
Alw44I	GTGCAC	1 cut(s)	1603
AlwI	GGATC	3 cut(s)	545, 2211, 2723
Aor51HI	AGCGCT	2 cut(s)	281, 1874
AoxI	GGCC	5 cut(s)	20, 708, 947, 1408, 2082
ApaLI	GTGCAC	1 cut(s)	1603
ApeKI	GCWGC	7 cut(s)	817, 929, 1157, 1252, 2271, 2432, 2616
ApoI	RAATTY	7 cut(s)	306, 1315, 1713, 1945, 2212, 2662, 2769
ArsI	GACNNNNNNTTYG	2 cut(s)	2551, 2583
AseI	ATTAAT	1 cut(s)	2856
Asp700I	GAANNNNTTC	2 cut(s)	1149, 2896
AspLEI	GCGC	2 cut(s)	282, 1875
AspS9I	GGNCC	3 cut(s)	20, 326, 1409
AsuHPI	GGTGA	4 cut(s)	1561, 1835, 1967, 2502
AvaII	GGWCC	1 cut(s)	326
AxyI	CCTNAGG	1 cut(s)	2130
BaeGI	GKGCMC	1 cut(s)	1607
BanII	GRGCYC	1 cut(s)	41
BarI	GAAGNNNNNNTAC	4 cut(s)	1569, 1601, 2311, 2343
Bbv12I	GWGCWC	3 cut(s)	41, 183, 1607
BbvCI	CCTCAGC	2 cut(s)	2428, 2760
BbvI	GCAGC	7 cut(s)	829, 916, 1144, 1239, 2283, 2444, 2628
BccI	CCATC	4 cut(s)	410, 1493, 2054, 2784
BceAI	ACGGC	2 cut(s)	95, 1750
BciT130I	CCWGG	3 cut(s)	476, 1312, 2221
BclI	TGATCA	3 cut(s)	45, 1354, 1903
BcoDI	GTCTC	6 cut(s)	192, 762, 1022, 1264, 1808, 2486
BcuI	ACTAGT	2 cut(s)	2153, 2807
BfmI	CTRYAG	4 cut(s)	930, 1373, 1539, 1876
BfoI	RGCGCY	2 cut(s)	283, 1876
BfrI	CTTAAG	1 cut(s)	689
BglII	AGATCT	2 cut(s)	68, 1401
BmcAI	AGTACT	1 cut(s)	1440
Bme1390I	CCNGG	3 cut(s)	476, 1312, 2221
Bme18I	GGWCC	1 cut(s)	326
BmgBI	CACGTC	1 cut(s)	2530
BmgT120I	GGNCC	3 cut(s)	20, 326, 1409
BmiI	GGNNCC	2 cut(s)	426, 994
BmrFI	CCNGG	3 cut(s)	476, 1312, 2221
BmrI	ACTGGG	1 cut(s)	1699
BmsI	GCATC	6 cut(s)	146, 943, 1000, 2089, 2380, 2402
BmuI	ACTGGG	1 cut(s)	1699
BoxI	GACNNNNGTC	1 cut(s)	2361
BplI	GAGNNNNNCTC	2 cut(s)	1922, 1954
BpmI	CTGGAG	7 cut(s)	497, 1046, 1288, 1294, 1759, 1949, 2014
Bpu10I	CCTNAGC	2 cut(s)	2428, 2760
BpuEI	CTTGAG	3 cut(s)	223, 881, 2767
BsaI	GGTCTC	1 cut(s)	762
BsaJI	CCNNGG	6 cut(s)	474, 896, 1766, 2195, 2705, 2721
BsaWI	WCCGGW	2 cut(s)	26, 2599
BsaXI	ACNNNNNCTCC	4 cut(s)	1610, 1640, 1916, 1946
Bsc4I	CCNNNNNNNGG	2 cut(s)	1855, 2874
Bse118I	RCCGGY	1 cut(s)	710
Bse1I	ACTGG	5 cut(s)	546, 978, 1271, 1694, 1776
Bse21I	CCTNAGG	1 cut(s)	2130
BseBI	CCWGG	3 cut(s)	476, 1312, 2221
BseDI	CCNNGG	6 cut(s)	474, 896, 1766, 2195, 2705, 2721
BseLI	CCNNNNNNNGG	2 cut(s)	1855, 2874
BseMII	CTCAG	8 cut(s)	711, 782, 1023, 1419, 2064, 2121, 2442, 2751
BseNI	ACTGG	5 cut(s)	546, 978, 1271, 1694, 1776
BseRI	GAGGAG	3 cut(s)	437, 1070, 2080
BseSI	GKGCMC	1 cut(s)	1607
BseXI	GCAGC	7 cut(s)	829, 916, 1144, 1239, 2283, 2444, 2628
BseYI	CCCAGC	2 cut(s)	1411, 2000
BsgI	GTGCAG	2 cut(s)	285, 2297
Bsh1285I	CGRYCG	1 cut(s)	1090
BshFI	GGCC	5 cut(s)	22, 710, 949, 1410, 2084
BsiEI	CGRYCG	1 cut(s)	1090
BsiHKAI	GWGCWC	3 cut(s)	41, 183, 1607
BsiSI	CCGG	3 cut(s)	27, 711, 2600
BslFI	GGGAC	1 cut(s)	2453
BslI	CCNNNNNNNGG	2 cut(s)	1855, 2874
BsmAI	GTCTC	6 cut(s)	192, 762, 1022, 1264, 1808, 2486
BsmFI	GGGAC	1 cut(s)	2453
BsmI	GAATGC	3 cut(s)	608, 1580, 1602
BsnI	GGCC	5 cut(s)	22, 710, 949, 1410, 2084
Bso31I	GGTCTC	1 cut(s)	762
Bsp1286I	GDGCHC	3 cut(s)	41, 183, 1607
Bsp19I	CCATGG	2 cut(s)	896, 2195
BspACI	CCGC	6 cut(s)	54, 343, 1795, 2081, 2278, 2485
BspANI	GGCC	5 cut(s)	22, 710, 949, 1410, 2084
BspCNI	CTCAG	8 cut(s)	710, 781, 1024, 1418, 2065, 2122, 2441, 2752
BspHI	TCATGA	1 cut(s)	775
BspLI	GGNNCC	2 cut(s)	426, 994
BspMAI	CTGCAG	3 cut(s)	934, 1377, 1543
BspPI	GGATC	3 cut(s)	545, 2211, 2723
BspTI	CTTAAG	1 cut(s)	689
BspTNI	GGTCTC	1 cut(s)	762
BsrBI	CCGCTC	1 cut(s)	2280
BsrFI	RCCGGY	1 cut(s)	710
BsrI	ACTGG	5 cut(s)	546, 978, 1271, 1694, 1776
BssAI	RCCGGY	1 cut(s)	710
BssECI	CCNNGG	6 cut(s)	474, 896, 1766, 2195, 2705, 2721
BssT1I	CCWWGG	4 cut(s)	896, 2195, 2705, 2721
Bst2UI	CCWGG	3 cut(s)	476, 1312, 2221
Bst4CI	ACNGT	5 cut(s)	185, 705, 1088, 1485, 2480
Bst6I	CTCTTC	3 cut(s)	966, 1776, 2130
BstAFI	CTTAAG	1 cut(s)	689
BstC8I	GCNNGC	6 cut(s)	278, 370, 602, 606, 712, 1212
BstDSI	CCRYGG	3 cut(s)	896, 1766, 2195
BstH2I	RGCGCY	2 cut(s)	283, 1876
BstHHI	GCGC	2 cut(s)	282, 1875
BstMAI	GTCTC	6 cut(s)	192, 762, 1022, 1264, 1808, 2486
BstMCI	CGRYCG	1 cut(s)	1090
BstMWI	GCNNNNNNNGC	8 cut(s)	707, 946, 1211, 1249, 1538, 2277, 2423, 2432
BstNI	CCWGG	3 cut(s)	476, 1312, 2221
BstNSI	RCATGY	1 cut(s)	254
BstPAI	GACNNNNGTC	1 cut(s)	2361
BstSCI	CCNGG	3 cut(s)	474, 1310, 2219
BstSFI	CTRYAG	4 cut(s)	930, 1373, 1539, 1876
BstSLI	GKGCMC	1 cut(s)	1607
BstV1I	GCAGC	7 cut(s)	829, 916, 1144, 1239, 2283, 2444, 2628
BstX2I	RGATCY	2 cut(s)	68, 1401
BstYI	RGATCY	2 cut(s)	68, 1401
Bsu36I	CCTNAGG	1 cut(s)	2130
BsuRI	GGCC	5 cut(s)	22, 710, 949, 1410, 2084
BtgI	CCRYGG	3 cut(s)	896, 1766, 2195
BtrI	CACGTC	1 cut(s)	2530
BtsIMutI	CAGTG	6 cut(s)	181, 362, 553, 985, 1783, 1989
Cac8I	GCNNGC	6 cut(s)	278, 370, 602, 606, 712, 1212
CciI	TCATGA	1 cut(s)	775
CfoI	GCGC	2 cut(s)	282, 1875
Cfr10I	RCCGGY	1 cut(s)	710
Cfr13I	GGNCC	3 cut(s)	20, 326, 1409
CseI	GACGC	1 cut(s)	1258
Csp6I	GTAC	4 cut(s)	903, 1439, 1503, 2502
CviQI	GTAC	4 cut(s)	903, 1439, 1503, 2502
DraIII	CACNNNGTG	1 cut(s)	1526
EaeI	YGGCCR	2 cut(s)	708, 2082
Eam1104I	CTCTTC	3 cut(s)	966, 1776, 2130
EarI	CTCTTC	3 cut(s)	966, 1776, 2130
Ecl136II	GAGCTC	1 cut(s)	39
Eco130I	CCWWGG	4 cut(s)	896, 2195, 2705, 2721
Eco24I	GRGCYC	1 cut(s)	41
Eco31I	GGTCTC	1 cut(s)	762
Eco47I	GGWCC	1 cut(s)	326
Eco47III	AGCGCT	2 cut(s)	281, 1874
Eco53kI	GAGCTC	1 cut(s)	39
Eco57I	CTGAAG	4 cut(s)	384, 990, 1908, 2289
Eco81I	CCTNAGG	1 cut(s)	2130
EcoICRI	GAGCTC	1 cut(s)	39
EcoRI	GAATTC	3 cut(s)	306, 1945, 2212
EcoRII	CCWGG	3 cut(s)	474, 1310, 2219
EcoT14I	CCWWGG	4 cut(s)	896, 2195, 2705, 2721
EcoT22I	ATGCAT	3 cut(s)	958, 2021, 2395
EcoT38I	GRGCYC	1 cut(s)	41
ErhI	CCWWGG	4 cut(s)	896, 2195, 2705, 2721
FalI	AAGNNNNNCTT	2 cut(s)	357, 389
FaqI	GGGAC	1 cut(s)	2453
FauNDI	CATATG	1 cut(s)	822
FbaI	TGATCA	3 cut(s)	45, 1354, 1903
FriOI	GRGCYC	1 cut(s)	41
GlaI	GCGC	2 cut(s)	281, 1874
GsaI	CCCAGC	2 cut(s)	1415, 2004
GsuI	CTGGAG	7 cut(s)	497, 1046, 1288, 1294, 1759, 1949, 2014
HaeII	RGCGCY	2 cut(s)	283, 1876
HaeIII	GGCC	5 cut(s)	22, 710, 949, 1410, 2084
HapII	CCGG	3 cut(s)	27, 711, 2600
HgaI	GACGC	1 cut(s)	1258
HhaI	GCGC	2 cut(s)	282, 1875
Hin6I	GCGC	2 cut(s)	280, 1873
HinP1I	GCGC	2 cut(s)	280, 1873
HincII	GTYRAC	1 cut(s)	2151
HindII	GTYRAC	1 cut(s)	2151
HindIII	AAGCTT	2 cut(s)	1380, 1890
HpaII	CCGG	3 cut(s)	27, 711, 2600
HphI	GGTGA	4 cut(s)	1561, 1835, 1967, 2502
Hpy166II	GTNNAC	7 cut(s)	248, 983, 1102, 1565, 1605, 2151, 2159
Hpy8I	GTNNAC	7 cut(s)	248, 983, 1102, 1565, 1605, 2151, 2159
Hpy99I	CGWCG	2 cut(s)	342, 1737
HpyAV	CCTTC	8 cut(s)	983, 1075, 1112, 1859, 2050, 2178, 2313, 2580
HpyCH4III	ACNGT	5 cut(s)	185, 705, 1088, 1485, 2480
HpyCH4IV	ACGT	4 cut(s)	337, 468, 723, 2529
HpyF10VI	GCNNNNNNNGC	8 cut(s)	707, 946, 1211, 1249, 1538, 2277, 2423, 2432
HpySE526I	ACGT	4 cut(s)	337, 468, 723, 2529
HspAI	GCGC	2 cut(s)	280, 1873
KroI	GCCGGC	1 cut(s)	710
KroNI	GCCGGC	1 cut(s)	712
Ksp22I	TGATCA	3 cut(s)	45, 1354, 1903
LmnI	GCTCC	8 cut(s)	29, 44, 424, 1292, 1924, 2285, 2756, 2783
Lsp1109I	GCAGC	7 cut(s)	829, 916, 1144, 1239, 2283, 2444, 2628
LweI	GCATC	6 cut(s)	146, 943, 1000, 2089, 2380, 2402
MaeII	ACGT	4 cut(s)	337, 468, 723, 2529
MaeIII	GTNAC	9 cut(s)	104, 223, 511, 1534, 1651, 2291, 2508, 2587, 2602
MbiI	CCGCTC	1 cut(s)	2280
MflI	RGATCY	2 cut(s)	68, 1401
MhlI	GDGCHC	3 cut(s)	41, 183, 1607
MlyI	GAGTC	4 cut(s)	983, 1411, 1560, 2839
MmeI	TCCRAC	2 cut(s)	552, 2065
Mph1103I	ATGCAT	3 cut(s)	958, 2021, 2395
MroNI	GCCGGC	1 cut(s)	710
MroXI	GAANNNNTTC	2 cut(s)	1149, 2896
MslI	CAYNNNNRTG	2 cut(s)	499, 1362
MspA1I	CMGCKG	1 cut(s)	929
MspCI	CTTAAG	1 cut(s)	689
MspI	CCGG	3 cut(s)	27, 711, 2600
MspR9I	CCNGG	3 cut(s)	476, 1312, 2221
Mva1269I	GAATGC	3 cut(s)	608, 1580, 1602
MvaI	CCWGG	3 cut(s)	476, 1312, 2221
MwoI	GCNNNNNNNGC	8 cut(s)	707, 946, 1211, 1249, 1538, 2277, 2423, 2432
NaeI	GCCGGC	1 cut(s)	712
NcoI	CCATGG	2 cut(s)	896, 2195
NdeI	CATATG	1 cut(s)	822
NgoMIV	GCCGGC	1 cut(s)	710
NlaIV	GGNNCC	2 cut(s)	426, 994
NmuCI	GTSAC	3 cut(s)	104, 1651, 2508
NsiI	ATGCAT	3 cut(s)	958, 2021, 2395
NspI	RCATGY	1 cut(s)	254
PagI	TCATGA	1 cut(s)	775
PctI	GAATGC	3 cut(s)	608, 1580, 1602
PdiI	GCCGGC	1 cut(s)	712
PdmI	GAANNNNTTC	2 cut(s)	1149, 2896
PfoI	TCCNGGA	2 cut(s)	1310, 2219
PleI	GAGTC	4 cut(s)	982, 1411, 1560, 2838
PpsI	GAGTC	4 cut(s)	982, 1411, 1560, 2838
PshAI	GACNNNNGTC	1 cut(s)	2361
PshBI	ATTAAT	1 cut(s)	2856
Psp124BI	GAGCTC	1 cut(s)	41
Psp6I	CCWGG	3 cut(s)	474, 1310, 2219
PspFI	CCCAGC	2 cut(s)	1411, 2000
PspGI	CCWGG	3 cut(s)	474, 1310, 2219
PspN4I	GGNNCC	2 cut(s)	426, 994
PspPI	GGNCC	3 cut(s)	20, 326, 1409
PsrI	GAACNNNNNNTAC	4 cut(s)	1527, 1559, 2284, 2316
PstI	CTGCAG	3 cut(s)	934, 1377, 1543
PsuI	RGATCY	2 cut(s)	68, 1401
PvuII	CAGCTG	1 cut(s)	929
RsaI	GTAC	4 cut(s)	904, 1440, 1504, 2503
RsaNI	GTAC	4 cut(s)	903, 1439, 1503, 2502
RseI	CAYNNNNRTG	2 cut(s)	499, 1362
SacI	GAGCTC	1 cut(s)	41
Sau96I	GGNCC	3 cut(s)	20, 326, 1409
ScaI	AGTACT	1 cut(s)	1440
SchI	GAGTC	4 cut(s)	983, 1411, 1560, 2839
ScrFI	CCNGG	3 cut(s)	476, 1312, 2221
SduI	GDGCHC	3 cut(s)	41, 183, 1607
SfaNI	GCATC	6 cut(s)	146, 943, 1000, 2089, 2380, 2402
SfcI	CTRYAG	4 cut(s)	930, 1373, 1539, 1876
SinI	GGWCC	1 cut(s)	326
SmiMI	CAYNNNNRTG	2 cut(s)	499, 1362
SmlI	CTYRAG	4 cut(s)	202, 689, 860, 2746
SmoI	CTYRAG	4 cut(s)	202, 689, 860, 2746
SpeI	ACTAGT	2 cut(s)	2153, 2807
SsiI	CCGC	6 cut(s)	54, 343, 1795, 2081, 2278, 2485
SstI	GAGCTC	1 cut(s)	41
StyD4I	CCNGG	3 cut(s)	474, 1310, 2219
StyI	CCWWGG	4 cut(s)	896, 2195, 2705, 2721
TaaI	ACNGT	5 cut(s)	185, 705, 1088, 1485, 2480
TaiI	ACGT	4 cut(s)	340, 471, 726, 2532
TaqI	TCGA	5 cut(s)	35, 177, 1153, 1732, 2413
TatI	WGTACW	1 cut(s)	1438
TauI	GCSGC	3 cut(s)	57, 345, 2084
TscAI	CASTG	6 cut(s)	188, 362, 553, 985, 1783, 1989
TseFI	GTSAC	3 cut(s)	104, 1651, 2508
TseI	GCWGC	7 cut(s)	817, 929, 1157, 1252, 2271, 2432, 2616
Tsp45I	GTSAC	3 cut(s)	104, 1651, 2508
TspGWI	ACGGA	7 cut(s)	31, 242, 902, 1750, 2216, 2331, 2532
TspRI	CASTG	6 cut(s)	188, 362, 553, 985, 1783, 1989
Vha464I	CTTAAG	1 cut(s)	689
VneI	GTGCAC	1 cut(s)	1603
VpaK11BI	GGWCC	1 cut(s)	326
VspI	ATTAAT	1 cut(s)	2856
XapI	RAATTY	7 cut(s)	306, 1315, 1713, 1945, 2212, 2662, 2769
XbaI	TCTAGA	3 cut(s)	793, 1279, 1970
XceI	RCATGY	1 cut(s)	254
XmnI	GAANNNNTTC	2 cut(s)	1149, 2896
ZrmI	AGTACT	1 cut(s)	1440
Zsp2I	ATGCAT	3 cut(s)	958, 2021, 2395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.