Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0008076

Physical Location & Seq

Genomic Coordinates Reverse (-)

21067938 .. 21075141

Gene Structure 7204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG217900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGAAAACTATGTTGGGCCTACTTCTTAAGTTCTCAGCACAGTTGGCCGGCATATCTAACGTGCTTGAAGTTTTGGATTCATCTTTTAAGGGGTCTCTTTCTTCTCAGCTTCATGACTTGCACCAACTTCTAGAAAACATATTAAAGACAAAGCAGCATATGGAGGTTATGATATGGTGCATACGACATGAGTTCCTTGAGAATGTGAAGCCTCGTCATACTGAAATCACACCATGGAGTACTCTTGTCCGTGAAAGGAAATCAGCTGCAGTTAAGCGTTCATGGCCTGATGCATTAAATAACTCTGAAGAGTCCAGTGGGCAGGAAGGTTCCCTGTTTATTGAAGATGCTCTAACAAATCTGGAGACTGAGCAAGGAAATACAATGATAGAGGAGTTGAAACTTGCATTTGCACAGAAGGATGGTTGTTCATCTGTTTACAGGTCTAAGATCGAAGGGATTAGAGGTTGTTATCCATTTGAAAATGTTCGAGCTGCTGTTGATATACTTTTTCTTTGTGGTAGTTCAGATTTGGTTGTTGCAAAGCAAGCAACTTTTCTATATTATCTATATGATCGGCATTGGACGCTGCCTGATGAGGACTGGAGACACATTCTAGAGGACTTCAGAGCTACCTTTGGTATCTCCAGGCATTTATTACTTGAATCGTTAATCTTTTATCTCTTGGATGATCACACAGATGAGGCTCTGCAGGAAGCTTGTCACCTACTTCCAGAGATCTCAGGCCCGGCGACTCATCCTAAGATTGCACAAGTACTACTAGAAAGGGGAAATCCTGATACTGCTCTTTCGGTTTTACGGTGGTCAGGGCGTGATGGTACTTCAAAGTCCATTTCACTTAGTGAGGCTGTAACTGCAGTTCGGGTGAGGGTAGAGTGTGGACTCTTTACTGAAGCATTCTTACATCAAAGAATGCTGTGCACCAAAGTCAAGGAGAAGAAGTTGAAGATTGGTCAATTAGGGGGTGTGACTGATGATTCAAATGACAGATATAAGTGGGAGGACTGGGTGGAGATATTGGTTTCTGAAATTTGTTTCCTTTGTATTCGACGGAACATGGTGGATAGAATGATAGAGTTGCCGTGGAACTCCAGTGAAGAGAAACATCTCCACAAATGTCTCTTAGATTATGCTATGGGTGATTCTTCCTCAACTATTGGAAGCCTTCTTGTGGTATTTTATATCCAGCGCTACATGTATTCTGAAGCTTACCAAGTTGATCAAATACTTAAAAACTTGGAGCAGGAGGTCATCTCAAAGAATTCTGTCAGTGAAGAAGTTTTATCTAGAAGGAAATCAGTGAGTGGCTGGAGAGCTGGGTTAATTAATAAATGCATGGACTTGCTACCAGAAATCCAACGCCAACAAGTGAAGGATGGAAAAGTGCCTGAGATGGCGGCCGCCACCTCTAGTGATGCAGAAATGTTAGAAACATCTTCTCTTCCTGAGGGGCAAGAATCAAAGTCAACTAGTTTACTGATTCCTTCGTCCATTGATTCTTCTGTTGCACTATGGGTGGATCAAAAGAATCCTTCCTGGAAACCAGCAATATCTGAAACCCCCCAAAAAAGAGGTGGATTGGTTGGCAGCTACCTCTCCGAACTTGGTAACTTTAGTTCTTCAGTTCTGCATGGAAGGTTATTTACCAACTCTGAAACAAGATTAAAGGCTGACATTAGTCTAAACAAGACTTTCAATTTTGAGGATGCATCAACTCCCCTTAGTCATCGAGCTAGTCCTGCCTCAGCAGCTAGGGACATGAATAGAAGTTCATCAAAGTTATTTTCAAATAACCGTCTCCGCAACAATCAATATGGTACATTGTCACCAGAAATGGAACAGGACGTGTTTCTCACTCCGTTCCAAACATTCCAAAATACAAGTCCTTCACACTACCAAAGGGTTACTACAAATCCGGTAACTACAACTAGCAGCAACAATGGCTTGTTTGAAGATTCCGCAAAGAACCTACATCCAAATTTGTCTAGTAAGGGTTTCCTAACGGATAGGGATGTTAGACCTTGGCATACAGCTTCCAAGGATGATCCAATGGACACATCCTTGAGCTATGGAGCTGGGGACAAAATTCTGAACAATGGAGCAAGATGGAGGTCTGACGAAACTAGTGATGAGGAAGAGGAGCAGAGTCAAGAGAGAGCATTTGGGATTATTAATCCTACCCCCACAAGAAGGGGAGTTCGTAGAAGCAGGTTTTCCAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0022414 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELYS

Protein Analysis

748

Amino Acids

84.48

Weight (kDa)

5.89

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ELYS	PF13934	112 - 383	7.6e-39	Nuclear pore complex assembly

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39810 AT2G39810
fragaria_vesca	FvH4_5g19540 FvH4_5g19540 FvH4_5g19540 FvH4_5g19540
malus_domestica	MD04G1060900.v1.1 MD06G1054200.v1.1
prunus_persica	Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1
pyrus_communis	pycom04g05480 pycom06g04560
rosa_chinensis	RchiOBHm_Chr7g0204151
rosa_laevigata	RLG00000003484
rosa_multiflora	Rmu_sc0001311.1_g000032
rosa_roxburghii	Rroxscaffold_3G00253300
rosa_rugosa	Rorug07G0081200
rosa_samantha	Rh7AG211100 Rh7BG209700 Rh7CG223600 Rh7DG217900
rosa_wichuraiana	Rw7G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2220
AciI	CCGC	4 cut(s)	1418, 1422, 1822, 1980
AclWI	GGATC	2 cut(s)	1548, 2060
AcoI	YGGCCR	2 cut(s)	45, 1419
AcsI	RAATTY	4 cut(s)	1050, 1282, 1999, 2106
AcuI	CTGAAG	5 cut(s)	327, 610, 933, 1245, 1626
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	4 cut(s)	241, 777, 841, 1840
AfeI	AGCGCT	1 cut(s)	1211
AfiI	CCNNNNNNNGG	2 cut(s)	1192, 2211
AflII	CTTAAG	1 cut(s)	26
AflIII	ACRYGT	2 cut(s)	1215, 1866
AhlI	ACTAGT	2 cut(s)	1490, 2144
AjiI	CACGTC	1 cut(s)	1867
AjnI	CCWGG	2 cut(s)	647, 1556
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
Alw21I	GWGCWC	1 cut(s)	944
Alw26I	GTCTC	5 cut(s)	99, 359, 601, 1145, 1823
Alw44I	GTGCAC	1 cut(s)	940
AlwI	GGATC	2 cut(s)	1548, 2060
Aor51HI	AGCGCT	1 cut(s)	1211
AoxI	GGCC	5 cut(s)	16, 45, 284, 745, 1419
ApaLI	GTGCAC	1 cut(s)	940
ApeKI	GCWGC	7 cut(s)	154, 266, 494, 589, 1608, 1769, 1953
ApoI	RAATTY	4 cut(s)	1050, 1282, 1999, 2106
ArsI	GACNNNNNNTTYG	2 cut(s)	1888, 1920
AseI	ATTAAT	2 cut(s)	1347, 2193
Asp700I	GAANNNNTTC	1 cut(s)	486
AspLEI	GCGC	1 cut(s)	1212
AspS9I	GGNCC	2 cut(s)	16, 746
AsuC2I	CCSGG	1 cut(s)	749
AsuHPI	GGTGA	4 cut(s)	716, 898, 1172, 1839
AxyI	CCTNAGG	1 cut(s)	1467
BaeGI	GKGCMC	1 cut(s)	944
BarI	GAAGNNNNNNTAC	4 cut(s)	906, 938, 1648, 1680
Bbv12I	GWGCWC	1 cut(s)	944
BbvCI	CCTCAGC	1 cut(s)	1765
BbvI	GCAGC	7 cut(s)	166, 253, 481, 576, 1620, 1781, 1965
BccI	CCATC	5 cut(s)	416, 830, 1391, 1408, 2121
BceAI	ACGGC	1 cut(s)	1087
BciT130I	CCWGG	2 cut(s)	649, 1558
BclI	TGATCA	2 cut(s)	691, 1240
BcnI	CCSGG	1 cut(s)	749
BcoDI	GTCTC	5 cut(s)	99, 359, 601, 1145, 1823
BcuI	ACTAGT	2 cut(s)	1490, 2144
BfmI	CTRYAG	3 cut(s)	267, 710, 876
BfoI	RGCGCY	1 cut(s)	1213
BfrI	CTTAAG	1 cut(s)	26
BfuAI	ACCTGC	1 cut(s)	2220
BglII	AGATCT	1 cut(s)	738
BisI	GCNGC	9 cut(s)	155, 267, 495, 590, 1419, 1422, 1609, 1770, 1954
BlsI	GCNGC	9 cut(s)	156, 268, 496, 591, 1420, 1423, 1610, 1771, 1955
BmcAI	AGTACT	2 cut(s)	241, 777
Bme1390I	CCNGG	3 cut(s)	649, 749, 1558
BmgBI	CACGTC	1 cut(s)	1867
BmgT120I	GGNCC	2 cut(s)	16, 746
BmiI	GGNNCC	1 cut(s)	331
BmrFI	CCNGG	3 cut(s)	649, 749, 1558
BmrI	ACTGGG	1 cut(s)	1036
BmsI	GCATC	5 cut(s)	280, 337, 1426, 1717, 1739
BmuI	ACTGGG	1 cut(s)	1036
BoxI	GACNNNNGTC	1 cut(s)	1698
BplI	GAGNNNNNCTC	2 cut(s)	1259, 1291
BpmI	CTGGAG	5 cut(s)	383, 625, 631, 1096, 1351
Bpu10I	CCTNAGC	1 cut(s)	1765
BpuEI	CTTGAG	2 cut(s)	218, 2104
BpuMI	CCSGG	1 cut(s)	749
BsaI	GGTCTC	1 cut(s)	99
BsaJI	CCNNGG	4 cut(s)	233, 1103, 2042, 2058
BsaWI	WCCGGW	1 cut(s)	1936
BsaXI	ACNNNNNCTCC	2 cut(s)	947, 977
Bsc4I	CCNNNNNNNGG	2 cut(s)	1192, 2211
Bse118I	RCCGGY	1 cut(s)	47
Bse1I	ACTGG	4 cut(s)	315, 608, 1031, 1113
Bse21I	CCTNAGG	1 cut(s)	1467
BseBI	CCWGG	2 cut(s)	649, 1558
BseDI	CCNNGG	4 cut(s)	233, 1103, 2042, 2058
BseGI	GGATG	9 cut(s)	427, 694, 757, 1402, 1732, 1993, 2038, 2068, 2078
BseLI	CCNNNNNNNGG	2 cut(s)	1192, 2211
BseMII	CTCAG	7 cut(s)	48, 119, 360, 756, 1401, 1458, 1779
BseNI	ACTGG	4 cut(s)	315, 608, 1031, 1113
BseRI	GAGGAG	2 cut(s)	407, 2174
BseSI	GKGCMC	1 cut(s)	944
BseX3I	CGGCCG	1 cut(s)	1419
BseXI	GCAGC	7 cut(s)	166, 253, 481, 576, 1620, 1781, 1965
BseYI	CCCAGC	2 cut(s)	1337, 2096
Bsh1285I	CGRYCG	1 cut(s)	1422
BshFI	GGCC	5 cut(s)	18, 47, 286, 747, 1421
BsiEI	CGRYCG	1 cut(s)	1422
BsiHKAI	GWGCWC	1 cut(s)	944
BsiSI	CCGG	3 cut(s)	48, 749, 1937
BslFI	GGGAC	2 cut(s)	1790, 2114
BslI	CCNNNNNNNGG	2 cut(s)	1192, 2211
BsmAI	GTCTC	5 cut(s)	99, 359, 601, 1145, 1823
BsmBI	CGTCTC	1 cut(s)	1823
BsmFI	GGGAC	2 cut(s)	1790, 2114
BsmI	GAATGC	2 cut(s)	917, 939
BsnI	GGCC	5 cut(s)	18, 47, 286, 747, 1421
Bso31I	GGTCTC	1 cut(s)	99
Bsp1286I	GDGCHC	1 cut(s)	944
Bsp143I	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
Bsp19I	CCATGG	1 cut(s)	233
BspACI	CCGC	4 cut(s)	1418, 1422, 1822, 1980
BspANI	GGCC	5 cut(s)	18, 47, 286, 747, 1421
BspCNI	CTCAG	7 cut(s)	47, 118, 361, 755, 1402, 1459, 1778
BspHI	TCATGA	1 cut(s)	112
BspLI	GGNNCC	1 cut(s)	331
BspMAI	CTGCAG	3 cut(s)	271, 714, 880
BspMI	ACCTGC	1 cut(s)	2220
BspPI	GGATC	2 cut(s)	1548, 2060
BspTI	CTTAAG	1 cut(s)	26
BspTNI	GGTCTC	1 cut(s)	99
BsrFI	RCCGGY	1 cut(s)	47
BsrI	ACTGG	4 cut(s)	315, 608, 1031, 1113
BssAI	RCCGGY	1 cut(s)	47
BssECI	CCNNGG	4 cut(s)	233, 1103, 2042, 2058
BssMI	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
BssT1I	CCWWGG	3 cut(s)	233, 2042, 2058
Bst2UI	CCWGG	2 cut(s)	649, 1558
Bst4CI	ACNGT	3 cut(s)	42, 822, 1817
Bst6I	CTCTTC	4 cut(s)	303, 1113, 1467, 2151
BstAFI	CTTAAG	1 cut(s)	26
BstC8I	GCNNGC	2 cut(s)	49, 549
BstDSI	CCRYGG	2 cut(s)	233, 1103
BstF5I	GGATG	9 cut(s)	427, 694, 757, 1402, 1732, 1993, 2038, 2068, 2078
BstH2I	RGCGCY	1 cut(s)	1213
BstHHI	GCGC	1 cut(s)	1212
BstKTI	GATC	7 cut(s)	453, 577, 694, 741, 1243, 1543, 2068
BstMAI	GTCTC	5 cut(s)	99, 359, 601, 1145, 1823
BstMBI	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
BstMCI	CGRYCG	1 cut(s)	1422
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 283, 548, 586, 875, 1760, 1769, 1962
BstNI	CCWGG	2 cut(s)	649, 1558
BstNSI	RCATGY	1 cut(s)	1219
BstPAI	GACNNNNGTC	1 cut(s)	1698
BstSCI	CCNGG	3 cut(s)	647, 747, 1556
BstSFI	CTRYAG	3 cut(s)	267, 710, 876
BstSLI	GKGCMC	1 cut(s)	944
BstV1I	GCAGC	7 cut(s)	166, 253, 481, 576, 1620, 1781, 1965
BstX2I	RGATCY	1 cut(s)	738
BstYI	RGATCY	1 cut(s)	738
BstZI	CGGCCG	1 cut(s)	1419
Bsu36I	CCTNAGG	1 cut(s)	1467
BsuRI	GGCC	5 cut(s)	18, 47, 286, 747, 1421
BtgI	CCRYGG	2 cut(s)	233, 1103
BtrI	CACGTC	1 cut(s)	1867
BtsCI	GGATG	9 cut(s)	427, 694, 757, 1402, 1732, 1993, 2038, 2068, 2078
BtsIMutI	CAGTG	4 cut(s)	322, 1120, 1297, 1326
BveI	ACCTGC	1 cut(s)	2220
Cac8I	GCNNGC	2 cut(s)	49, 549
CciI	TCATGA	1 cut(s)	112
CciNI	GCGGCCGC	1 cut(s)	1419
CfoI	GCGC	1 cut(s)	1212
Cfr10I	RCCGGY	1 cut(s)	47
Cfr13I	GGNCC	2 cut(s)	16, 746
CseI	GACGC	1 cut(s)	595
Csp6I	GTAC	4 cut(s)	240, 776, 840, 1839
CviAII	CATG	9 cut(s)	113, 188, 234, 282, 1078, 1216, 1357, 1652, 1780
CviQI	GTAC	4 cut(s)	240, 776, 840, 1839
DpnI	GATC	7 cut(s)	452, 576, 693, 740, 1242, 1542, 2067
DpnII	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
DraIII	CACNNNGTG	1 cut(s)	863
EaeI	YGGCCR	2 cut(s)	45, 1419
EagI	CGGCCG	1 cut(s)	1419
Eam1104I	CTCTTC	4 cut(s)	303, 1113, 1467, 2151
EarI	CTCTTC	4 cut(s)	303, 1113, 1467, 2151
EclXI	CGGCCG	1 cut(s)	1419
Eco130I	CCWWGG	3 cut(s)	233, 2042, 2058
Eco31I	GGTCTC	1 cut(s)	99
Eco47III	AGCGCT	1 cut(s)	1211
Eco52I	CGGCCG	1 cut(s)	1419
Eco57I	CTGAAG	5 cut(s)	327, 610, 933, 1245, 1626
Eco81I	CCTNAGG	1 cut(s)	1467
EcoRI	GAATTC	1 cut(s)	1282
EcoRII	CCWGG	2 cut(s)	647, 1556
EcoT14I	CCWWGG	3 cut(s)	233, 2042, 2058
EcoT22I	ATGCAT	3 cut(s)	295, 1358, 1732
ErhI	CCWWGG	3 cut(s)	233, 2042, 2058
Esp3I	CGTCTC	1 cut(s)	1823
FaeI	CATG	9 cut(s)	116, 191, 237, 285, 1081, 1219, 1360, 1655, 1783
FaqI	GGGAC	2 cut(s)	1790, 2114
FatI	CATG	9 cut(s)	112, 187, 233, 281, 1077, 1215, 1356, 1651, 1779
FauNDI	CATATG	1 cut(s)	159
FbaI	TGATCA	2 cut(s)	691, 1240
Fnu4HI	GCNGC	9 cut(s)	155, 267, 495, 590, 1419, 1422, 1609, 1770, 1954
FokI	GGATG	9 cut(s)	434, 701, 744, 1409, 1739, 1980, 2045, 2065, 2075
Fsp4HI	GCNGC	9 cut(s)	155, 267, 495, 590, 1419, 1422, 1609, 1770, 1954
GlaI	GCGC	1 cut(s)	1211
GluI	GCNGC	9 cut(s)	155, 267, 495, 590, 1419, 1422, 1609, 1770, 1954
GsaI	CCCAGC	2 cut(s)	1341, 2100
GsuI	CTGGAG	5 cut(s)	383, 625, 631, 1096, 1351
HaeII	RGCGCY	1 cut(s)	1213
HaeIII	GGCC	5 cut(s)	18, 47, 286, 747, 1421
HapII	CCGG	3 cut(s)	48, 749, 1937
HgaI	GACGC	1 cut(s)	595
HhaI	GCGC	1 cut(s)	1212
Hin1II	CATG	9 cut(s)	116, 191, 237, 285, 1081, 1219, 1360, 1655, 1783
Hin6I	GCGC	1 cut(s)	1210
HinP1I	GCGC	1 cut(s)	1210
HincII	GTYRAC	1 cut(s)	1488
HindII	GTYRAC	1 cut(s)	1488
HindIII	AAGCTT	2 cut(s)	717, 1227
HpaII	CCGG	3 cut(s)	48, 749, 1937
HphI	GGTGA	4 cut(s)	716, 898, 1172, 1839
Hpy166II	GTNNAC	5 cut(s)	439, 902, 942, 1488, 1496
Hpy188III	TCNNGA	9 cut(s)	113, 131, 362, 617, 734, 797, 1308, 1466, 2171
Hpy8I	GTNNAC	5 cut(s)	439, 902, 942, 1488, 1496
Hpy99I	CGWCG	1 cut(s)	1074
HpyCH4III	ACNGT	3 cut(s)	42, 822, 1817
HpyCH4IV	ACGT	2 cut(s)	60, 1866
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 283, 548, 586, 875, 1760, 1769, 1962
HpySE526I	ACGT	2 cut(s)	60, 1866
Hsp92II	CATG	9 cut(s)	116, 191, 237, 285, 1081, 1219, 1360, 1655, 1783
HspAI	GCGC	1 cut(s)	1210
KroI	GCCGGC	1 cut(s)	47
KroNI	GCCGGC	1 cut(s)	49
Ksp22I	TGATCA	2 cut(s)	691, 1240
Kzo9I	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
LmnI	GCTCC	4 cut(s)	1261, 2093, 2120, 2161
Lsp1109I	GCAGC	7 cut(s)	166, 253, 481, 576, 1620, 1781, 1965
LweI	GCATC	5 cut(s)	280, 337, 1426, 1717, 1739
MaeII	ACGT	2 cut(s)	60, 1866
MaeIII	GTNAC	7 cut(s)	722, 871, 988, 1628, 1845, 1924, 1939
MalI	GATC	7 cut(s)	452, 576, 693, 740, 1242, 1542, 2067
MboI	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
MflI	RGATCY	1 cut(s)	738
MhlI	GDGCHC	1 cut(s)	944
MluCI	AATT	7 cut(s)	977, 1050, 1282, 1344, 1717, 1999, 2106
MlyI	GAGTC	4 cut(s)	320, 748, 897, 2176
MmeI	TCCRAC	1 cut(s)	1402
Mph1103I	ATGCAT	3 cut(s)	295, 1358, 1732
MroNI	GCCGGC	1 cut(s)	47
MroXI	GAANNNNTTC	1 cut(s)	486
MslI	CAYNNNNRTG	1 cut(s)	699
MspA1I	CMGCKG	1 cut(s)	266
MspCI	CTTAAG	1 cut(s)	26
MspI	CCGG	3 cut(s)	48, 749, 1937
MspR9I	CCNGG	3 cut(s)	649, 749, 1558
Mva1269I	GAATGC	2 cut(s)	917, 939
MvaI	CCWGG	2 cut(s)	649, 1558
MwoI	GCNNNNNNNGC	8 cut(s)	44, 283, 548, 586, 875, 1760, 1769, 1962
NaeI	GCCGGC	1 cut(s)	49
NciI	CCSGG	1 cut(s)	749
NcoI	CCATGG	1 cut(s)	233
NdeI	CATATG	1 cut(s)	159
NdeII	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
NgoMIV	GCCGGC	1 cut(s)	47
NlaIII	CATG	9 cut(s)	116, 191, 237, 285, 1081, 1219, 1360, 1655, 1783
NlaIV	GGNNCC	1 cut(s)	331
NmuCI	GTSAC	3 cut(s)	722, 988, 1845
NotI	GCGGCCGC	1 cut(s)	1419
NsiI	ATGCAT	3 cut(s)	295, 1358, 1732
NspI	RCATGY	1 cut(s)	1219
PacI	TTAATTAA	1 cut(s)	1347
PagI	TCATGA	1 cut(s)	112
PciI	ACATGT	1 cut(s)	1215
PctI	GAATGC	2 cut(s)	917, 939
PdiI	GCCGGC	1 cut(s)	49
PdmI	GAANNNNTTC	1 cut(s)	486
PfeI	GAWTC	9 cut(s)	77, 665, 998, 1163, 1478, 1501, 1517, 1549, 1976
PfoI	TCCNGGA	1 cut(s)	1556
PkrI	GCNGC	9 cut(s)	156, 268, 496, 591, 1420, 1423, 1610, 1771, 1955
PleI	GAGTC	4 cut(s)	319, 748, 897, 2175
PpsI	GAGTC	4 cut(s)	319, 748, 897, 2175
PscI	ACATGT	1 cut(s)	1215
PshAI	GACNNNNGTC	1 cut(s)	1698
PshBI	ATTAAT	2 cut(s)	1347, 2193
Psp6I	CCWGG	2 cut(s)	647, 1556
PspFI	CCCAGC	2 cut(s)	1337, 2096
PspGI	CCWGG	2 cut(s)	647, 1556
PspN4I	GGNNCC	1 cut(s)	331
PspPI	GGNCC	2 cut(s)	16, 746
PsrI	GAACNNNNNNTAC	4 cut(s)	864, 896, 1621, 1653
PstI	CTGCAG	3 cut(s)	271, 714, 880
PsuI	RGATCY	1 cut(s)	738
PvuII	CAGCTG	1 cut(s)	266
RsaI	GTAC	4 cut(s)	241, 777, 841, 1840
RsaNI	GTAC	4 cut(s)	240, 776, 840, 1839
RseI	CAYNNNNRTG	1 cut(s)	699
SatI	GCNGC	9 cut(s)	155, 267, 495, 590, 1419, 1422, 1609, 1770, 1954
Sau3AI	GATC	7 cut(s)	450, 574, 691, 738, 1240, 1540, 2065
Sau96I	GGNCC	2 cut(s)	16, 746
ScaI	AGTACT	2 cut(s)	241, 777
SchI	GAGTC	4 cut(s)	320, 748, 897, 2176
ScrFI	CCNGG	3 cut(s)	649, 749, 1558
SduI	GDGCHC	1 cut(s)	944
SfaNI	GCATC	5 cut(s)	280, 337, 1426, 1717, 1739
SfcI	CTRYAG	3 cut(s)	267, 710, 876
SmiMI	CAYNNNNRTG	1 cut(s)	699
SmlI	CTYRAG	3 cut(s)	26, 197, 2083
SmoI	CTYRAG	3 cut(s)	26, 197, 2083
SpeI	ACTAGT	2 cut(s)	1490, 2144
Sse9I	AATT	7 cut(s)	977, 1050, 1282, 1344, 1717, 1999, 2106
SsiI	CCGC	4 cut(s)	1418, 1422, 1822, 1980
StyD4I	CCNGG	3 cut(s)	647, 747, 1556
StyI	CCWWGG	3 cut(s)	233, 2042, 2058
TaaI	ACNGT	3 cut(s)	42, 822, 1817
TaiI	ACGT	2 cut(s)	63, 1869
TaqI	TCGA	4 cut(s)	453, 490, 1069, 1750
TasI	AATT	7 cut(s)	977, 1050, 1282, 1344, 1717, 1999, 2106
TatI	WGTACW	2 cut(s)	239, 775
TauI	GCSGC	2 cut(s)	1421, 1424
TfiI	GAWTC	9 cut(s)	77, 665, 998, 1163, 1478, 1501, 1517, 1549, 1976
TscAI	CASTG	4 cut(s)	322, 1120, 1297, 1326
TseFI	GTSAC	3 cut(s)	722, 988, 1845
TseI	GCWGC	7 cut(s)	154, 266, 494, 589, 1608, 1769, 1953
Tsp45I	GTSAC	3 cut(s)	722, 988, 1845
TspDTI	ATGAA	7 cut(s)	17, 69, 101, 270, 420, 1782, 1796
TspGWI	ACGGA	4 cut(s)	239, 1087, 1869, 2039
TspRI	CASTG	4 cut(s)	322, 1120, 1297, 1326
Vha464I	CTTAAG	1 cut(s)	26
VneI	GTGCAC	1 cut(s)	940
VspI	ATTAAT	2 cut(s)	1347, 2193
XapI	RAATTY	4 cut(s)	1050, 1282, 1999, 2106
XbaI	TCTAGA	3 cut(s)	130, 616, 1307
XceI	RCATGY	1 cut(s)	1219
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1592
XmnI	GAANNNNTTC	1 cut(s)	486
ZrmI	AGTACT	2 cut(s)	241, 777
Zsp2I	ATGCAT	3 cut(s)	295, 1358, 1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.