Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001311.1

Orthogroup ID

OG0008076

Physical Location & Seq

Genomic Coordinates Reverse (-)

141460 .. 146160

Gene Structure 4701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001311.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

atgtccatatctgttgatcctgttattgcctttttgttggatgaggtggtcgttaaggattggtgcaagcgagcattccagaacatcatcacagaacttcaagtgatctataatcttgaagcagaacagatgaaaactatgttgggcctacttcttaagttctcagcacagttggccggcatatctaacgtgcttgaagttttggattcatcttttaaggggtctctttcttctcagcttcatgacttgcaccaacttctagaaaacatattaaagacaaagcagcatatggaggttatgatatggtgcatacgacatgagttccttgagaatgtgaagcctcgtcatactgaaatcacatcatggagtactcttgtccgtgaaaggaaatcagctgcagttaagcgttcatggcctgatgcattaaataactctgaagagtccagtgggcaggaaggttccctgtttattgaagatgctctaacaaatctggagactgagcaaggaaatacaatgatagaggagttgaaacttgcatttgcacagaaggatggtcgttcatctgtttacaggtctaagatcgaagggattagaggttgttatccatttgaaaatgttcgagctgcggttgatatactttttctttgtggtagttcagatttggttgttgcaaagcaagcaacttttctatattatctatatgatcggcattggacgctgcctgatgaggactggagacacattctagaggacttcggagctacctttggtatctccaggcatttattacttgaatcgtttatcttttatctcttggatgatcacacagttgaggctctgcaggaagcttgtcacctacttccagagatctcaggcccggcgactcatcctaagattgcacaagtactactagaaaggggaaatcctgatactgctcttttggttttacggttgtcagggcgtgatggtacttcaaagtccatttcacttagtgaggctgtaactgcagttcgggtgagggtagagtgtggactctttactgaagcattcttacatcaaagaatgctgtgcaccaaagtcaaggagaagaagttgaagattggtcaattagggggtgtgactgatgattcaaatgacagatataagtgggaggactgggtggagatattggtttctgaaatttgtttcctttgtattcgacggaacatggtggatagaatgatagagttgccgtggaactccagtgaagagaaacatctccacaaatgtctcttagattatgctatgggtgattcttcctcaactattggaagccttcttgtggtattttatatccagcgctacatgtattctgaagcttatcaagttgatcaaatacttaaaaacttggagcaggaggtcatctcaaagaattctgtcagtgaagaagttttatctagaaggaaatcagtgagtggctggagagctgggttaattaataaatgcatggacttgctaccagaaatccaacgccaacaagtgaaggatggaaaagtgcctgagatggcagccgccacctctagtgatgcagaaatgttagaaacatcttctcttcctgaggggcaagaatcaaagtcaactagtttactgattccttcgtccattgattcttctgttgcactatgggcggatcaaaagaatccttcctggaaaccagcaatatctgaaaccccccaaaaaagaggtggattggttggcagctacctctccgaacttggtaactttagttcttcagttctgcatggaaggttatttaccaattctgaaacaagattaaaggctgacattagtctaaacaagactttcaattttgaggatgcatcaactccccttagtcatcgagctagtcctgcctcagcagctagggacatgaatagaagttcatcaaagttattttcaaataaccgtctccgcaacaatcaatatggtacattgtcaccagaaatggaacaggacgtgtttctcactccgttccaaacattccaaaatacaagtccttcacactatcaaagggttactacaaatccggtaactacaactagcagcaacaatggcttgtttgaagattctgcaaagaacctacatccaaatttgtctagtaagggtttcctaatggatagggatgttagaccttggcatacagcttccaaggatgatccaatggacacatccttgagctatggagctggggacaaaattctgaacaatggagcaagatggaggtctgacgaaactagtgatgaggaagaggagcagagtcaagagagagcatttgggattattaatcctacccccacaagaaggggagttcgtagaagcaggttttccaagagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0022414 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELYS

Protein Analysis

791

Amino Acids

89.36

Weight (kDa)

5.74

Isoelectric Point (pI)

52.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39810 AT2G39810
fragaria_vesca	FvH4_5g19540 FvH4_5g19540 FvH4_5g19540 FvH4_5g19540
malus_domestica	MD04G1060900.v1.1 MD06G1054200.v1.1
prunus_persica	Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1 Prupe.5G064600_v2.0.a1
pyrus_communis	pycom04g05480 pycom06g04560
rosa_chinensis	RchiOBHm_Chr7g0204151
rosa_laevigata	RLG00000003484
rosa_multiflora	Rmu_sc0001311.1_g000032
rosa_roxburghii	Rroxscaffold_3G00253300
rosa_rugosa	Rorug07G0081200
rosa_samantha	Rh7AG211100 Rh7BG209700 Rh7CG223600 Rh7DG217900
rosa_wichuraiana	Rw7G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2349
AciI	CCGC	4 cut(s)	626, 1551, 1667, 1951
AclWI	GGATC	3 cut(s)	11, 1677, 2189
AcoI	YGGCCR	1 cut(s)	174
AcsI	RAATTY	4 cut(s)	1179, 1411, 2128, 2235
AcuI	CTGAAG	4 cut(s)	456, 1062, 1374, 1755
AdeI	CACNNNGTG	1 cut(s)	992
AfaI	GTAC	4 cut(s)	370, 906, 970, 1969
AfeI	AGCGCT	1 cut(s)	1340
AfiI	CCNNNNNNNGG	2 cut(s)	1321, 2340
AflII	CTTAAG	1 cut(s)	155
AflIII	ACRYGT	2 cut(s)	1344, 1995
AhlI	ACTAGT	2 cut(s)	1619, 2273
AjiI	CACGTC	1 cut(s)	1996
AjnI	CCWGG	2 cut(s)	776, 1685
AjuI	GAANNNNNNNTTGG	2 cut(s)	125, 157
Alw21I	GWGCWC	1 cut(s)	1073
Alw26I	GTCTC	5 cut(s)	228, 488, 730, 1274, 1952
Alw44I	GTGCAC	1 cut(s)	1069
AlwI	GGATC	3 cut(s)	11, 1677, 2189
Aor51HI	AGCGCT	1 cut(s)	1340
AoxI	GGCC	4 cut(s)	145, 174, 413, 874
ApaLI	GTGCAC	1 cut(s)	1069
ApeKI	GCWGC	8 cut(s)	283, 395, 623, 718, 1547, 1737, 1898, 2082
ApoI	RAATTY	4 cut(s)	1179, 1411, 2128, 2235
ArsI	GACNNNNNNTTYG	2 cut(s)	2017, 2049
AseI	ATTAAT	2 cut(s)	1476, 2322
Asp700I	GAANNNNTTC	1 cut(s)	615
AspLEI	GCGC	1 cut(s)	1341
AspS9I	GGNCC	2 cut(s)	145, 875
AsuC2I	CCSGG	1 cut(s)	878
AsuHPI	GGTGA	4 cut(s)	845, 1027, 1301, 1968
AxyI	CCTNAGG	1 cut(s)	1596
BaeGI	GKGCMC	1 cut(s)	1073
BarI	GAAGNNNNNNTAC	4 cut(s)	1035, 1067, 1777, 1809
Bbv12I	GWGCWC	1 cut(s)	1073
BbvCI	CCTCAGC	1 cut(s)	1894
BbvI	GCAGC	8 cut(s)	295, 382, 610, 705, 1559, 1749, 1910, 2094
BccI	CCATC	5 cut(s)	545, 959, 1520, 1537, 2250
BceAI	ACGGC	1 cut(s)	1216
BciT130I	CCWGG	2 cut(s)	778, 1687
BclI	TGATCA	2 cut(s)	820, 1369
BcnI	CCSGG	1 cut(s)	878
BcoDI	GTCTC	5 cut(s)	228, 488, 730, 1274, 1952
BcuI	ACTAGT	2 cut(s)	1619, 2273
BfmI	CTRYAG	3 cut(s)	396, 839, 1005
BfoI	RGCGCY	1 cut(s)	1342
BfrI	CTTAAG	1 cut(s)	155
BfuAI	ACCTGC	1 cut(s)	2349
BglII	AGATCT	1 cut(s)	867
BisI	GCNGC	9 cut(s)	284, 396, 624, 719, 1548, 1551, 1738, 1899, 2083
BlsI	GCNGC	9 cut(s)	285, 397, 625, 720, 1549, 1552, 1739, 1900, 2084
BmcAI	AGTACT	2 cut(s)	370, 906
Bme1390I	CCNGG	3 cut(s)	778, 878, 1687
BmgBI	CACGTC	1 cut(s)	1996
BmgT120I	GGNCC	2 cut(s)	145, 875
BmiI	GGNNCC	1 cut(s)	460
BmrFI	CCNGG	3 cut(s)	778, 878, 1687
BmrI	ACTGGG	1 cut(s)	1165
BmsI	GCATC	5 cut(s)	409, 466, 1555, 1846, 1868
BmuI	ACTGGG	1 cut(s)	1165
BoxI	GACNNNNGTC	1 cut(s)	1827
BplI	GAGNNNNNCTC	2 cut(s)	1388, 1420
BpmI	CTGGAG	5 cut(s)	512, 754, 760, 1225, 1480
Bpu10I	CCTNAGC	1 cut(s)	1894
BpuEI	CTTGAG	2 cut(s)	347, 2233
BpuMI	CCSGG	1 cut(s)	878
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	3 cut(s)	1232, 2171, 2187
BsaWI	WCCGGW	1 cut(s)	2065
BsaXI	ACNNNNNCTCC	2 cut(s)	1076, 1106
Bsc4I	CCNNNNNNNGG	2 cut(s)	1321, 2340
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	4 cut(s)	444, 737, 1160, 1242
Bse21I	CCTNAGG	1 cut(s)	1596
BseBI	CCWGG	2 cut(s)	778, 1687
BseDI	CCNNGG	3 cut(s)	1232, 2171, 2187
BseLI	CCNNNNNNNGG	2 cut(s)	1321, 2340
BseMII	CTCAG	7 cut(s)	177, 248, 489, 885, 1530, 1587, 1908
BseNI	ACTGG	4 cut(s)	444, 737, 1160, 1242
BseRI	GAGGAG	2 cut(s)	536, 2303
BseSI	GKGCMC	1 cut(s)	1073
BseXI	GCAGC	8 cut(s)	295, 382, 610, 705, 1559, 1749, 1910, 2094
BseYI	CCCAGC	2 cut(s)	1466, 2225
BshFI	GGCC	4 cut(s)	147, 176, 415, 876
BsiHKAI	GWGCWC	1 cut(s)	1073
BsiSI	CCGG	3 cut(s)	177, 878, 2066
BslFI	GGGAC	2 cut(s)	1919, 2243
BslI	CCNNNNNNNGG	2 cut(s)	1321, 2340
BsmAI	GTCTC	5 cut(s)	228, 488, 730, 1274, 1952
BsmBI	CGTCTC	1 cut(s)	1952
BsmFI	GGGAC	2 cut(s)	1919, 2243
BsmI	GAATGC	3 cut(s)	74, 1046, 1068
BsnI	GGCC	4 cut(s)	147, 176, 415, 876
Bso31I	GGTCTC	1 cut(s)	228
Bsp1286I	GDGCHC	1 cut(s)	1073
Bsp143I	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
BspACI	CCGC	4 cut(s)	626, 1551, 1667, 1951
BspANI	GGCC	4 cut(s)	147, 176, 415, 876
BspCNI	CTCAG	7 cut(s)	176, 247, 490, 884, 1531, 1588, 1907
BspHI	TCATGA	1 cut(s)	241
BspLI	GGNNCC	1 cut(s)	460
BspMAI	CTGCAG	3 cut(s)	400, 843, 1009
BspMI	ACCTGC	1 cut(s)	2349
BspPI	GGATC	3 cut(s)	11, 1677, 2189
BspTI	CTTAAG	1 cut(s)	155
BspTNI	GGTCTC	1 cut(s)	228
BsrFI	RCCGGY	1 cut(s)	176
BsrI	ACTGG	4 cut(s)	444, 737, 1160, 1242
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	3 cut(s)	1232, 2171, 2187
BssMI	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
BssT1I	CCWWGG	2 cut(s)	2171, 2187
Bst2UI	CCWGG	2 cut(s)	778, 1687
Bst4CI	ACNGT	4 cut(s)	171, 829, 951, 1946
Bst6I	CTCTTC	4 cut(s)	432, 1242, 1596, 2280
BstAFI	CTTAAG	1 cut(s)	155
BstC8I	GCNNGC	4 cut(s)	68, 72, 178, 678
BstDSI	CCRYGG	1 cut(s)	1232
BstH2I	RGCGCY	1 cut(s)	1342
BstHHI	GCGC	1 cut(s)	1341
BstKTI	GATC	9 cut(s)	19, 108, 582, 706, 823, 870, 1372, 1672, 2197
BstMAI	GTCTC	5 cut(s)	228, 488, 730, 1274, 1952
BstMBI	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
BstMWI	GCNNNNNNNGC	9 cut(s)	173, 412, 677, 715, 1004, 1664, 1889, 1898, 2091
BstNI	CCWGG	2 cut(s)	778, 1687
BstNSI	RCATGY	1 cut(s)	1348
BstPAI	GACNNNNGTC	1 cut(s)	1827
BstSCI	CCNGG	3 cut(s)	776, 876, 1685
BstSFI	CTRYAG	3 cut(s)	396, 839, 1005
BstSLI	GKGCMC	1 cut(s)	1073
BstV1I	GCAGC	8 cut(s)	295, 382, 610, 705, 1559, 1749, 1910, 2094
BstX2I	RGATCY	1 cut(s)	867
BstYI	RGATCY	1 cut(s)	867
Bsu36I	CCTNAGG	1 cut(s)	1596
BsuRI	GGCC	4 cut(s)	147, 176, 415, 876
BtgI	CCRYGG	1 cut(s)	1232
BtrI	CACGTC	1 cut(s)	1996
BtsIMutI	CAGTG	4 cut(s)	451, 1249, 1426, 1455
BveI	ACCTGC	1 cut(s)	2349
Cac8I	GCNNGC	4 cut(s)	68, 72, 178, 678
CciI	TCATGA	1 cut(s)	241
CfoI	GCGC	1 cut(s)	1341
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	2 cut(s)	145, 875
CseI	GACGC	1 cut(s)	724
Csp6I	GTAC	4 cut(s)	369, 905, 969, 1968
CviAII	CATG	9 cut(s)	242, 317, 363, 411, 1207, 1345, 1486, 1781, 1909
CviQI	GTAC	4 cut(s)	369, 905, 969, 1968
DpnI	GATC	9 cut(s)	18, 107, 581, 705, 822, 869, 1371, 1671, 2196
DpnII	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
DraIII	CACNNNGTG	1 cut(s)	992
EaeI	YGGCCR	1 cut(s)	174
Eam1104I	CTCTTC	4 cut(s)	432, 1242, 1596, 2280
EarI	CTCTTC	4 cut(s)	432, 1242, 1596, 2280
EciI	GGCGGA	1 cut(s)	1682
Eco130I	CCWWGG	2 cut(s)	2171, 2187
Eco31I	GGTCTC	1 cut(s)	228
Eco47III	AGCGCT	1 cut(s)	1340
Eco57I	CTGAAG	4 cut(s)	456, 1062, 1374, 1755
Eco81I	CCTNAGG	1 cut(s)	1596
EcoRI	GAATTC	1 cut(s)	1411
EcoRII	CCWGG	2 cut(s)	776, 1685
EcoT14I	CCWWGG	2 cut(s)	2171, 2187
EcoT22I	ATGCAT	3 cut(s)	424, 1487, 1861
ErhI	CCWWGG	2 cut(s)	2171, 2187
Esp3I	CGTCTC	1 cut(s)	1952
FaeI	CATG	9 cut(s)	245, 320, 366, 414, 1210, 1348, 1489, 1784, 1912
FaqI	GGGAC	2 cut(s)	1919, 2243
FatI	CATG	9 cut(s)	241, 316, 362, 410, 1206, 1344, 1485, 1780, 1908
FauNDI	CATATG	1 cut(s)	288
FbaI	TGATCA	2 cut(s)	820, 1369
Fnu4HI	GCNGC	9 cut(s)	284, 396, 624, 719, 1548, 1551, 1738, 1899, 2083
Fsp4HI	GCNGC	9 cut(s)	284, 396, 624, 719, 1548, 1551, 1738, 1899, 2083
GlaI	GCGC	1 cut(s)	1340
GluI	GCNGC	9 cut(s)	284, 396, 624, 719, 1548, 1551, 1738, 1899, 2083
GsaI	CCCAGC	2 cut(s)	1470, 2229
GsuI	CTGGAG	5 cut(s)	512, 754, 760, 1225, 1480
HaeII	RGCGCY	1 cut(s)	1342
HaeIII	GGCC	4 cut(s)	147, 176, 415, 876
HapII	CCGG	3 cut(s)	177, 878, 2066
HgaI	GACGC	1 cut(s)	724
HhaI	GCGC	1 cut(s)	1341
Hin1II	CATG	9 cut(s)	245, 320, 366, 414, 1210, 1348, 1489, 1784, 1912
Hin6I	GCGC	1 cut(s)	1339
HinP1I	GCGC	1 cut(s)	1339
HincII	GTYRAC	1 cut(s)	1617
HindII	GTYRAC	1 cut(s)	1617
HindIII	AAGCTT	2 cut(s)	846, 1356
HpaII	CCGG	3 cut(s)	177, 878, 2066
HphI	GGTGA	4 cut(s)	845, 1027, 1301, 1968
Hpy166II	GTNNAC	5 cut(s)	568, 1031, 1071, 1617, 1625
Hpy8I	GTNNAC	5 cut(s)	568, 1031, 1071, 1617, 1625
Hpy99I	CGWCG	1 cut(s)	1203
HpyCH4III	ACNGT	4 cut(s)	171, 829, 951, 1946
HpyCH4IV	ACGT	2 cut(s)	189, 1995
HpyF10VI	GCNNNNNNNGC	9 cut(s)	173, 412, 677, 715, 1004, 1664, 1889, 1898, 2091
HpySE526I	ACGT	2 cut(s)	189, 1995
Hsp92II	CATG	9 cut(s)	245, 320, 366, 414, 1210, 1348, 1489, 1784, 1912
HspAI	GCGC	1 cut(s)	1339
KroI	GCCGGC	1 cut(s)	176
KroNI	GCCGGC	1 cut(s)	178
Ksp22I	TGATCA	2 cut(s)	820, 1369
Kzo9I	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
LmnI	GCTCC	5 cut(s)	758, 1390, 2222, 2249, 2290
Lsp1109I	GCAGC	8 cut(s)	295, 382, 610, 705, 1559, 1749, 1910, 2094
LweI	GCATC	5 cut(s)	409, 466, 1555, 1846, 1868
MaeII	ACGT	2 cut(s)	189, 1995
MaeIII	GTNAC	7 cut(s)	851, 1000, 1117, 1757, 1974, 2053, 2068
MalI	GATC	9 cut(s)	18, 107, 581, 705, 822, 869, 1371, 1671, 2196
MboI	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
MflI	RGATCY	1 cut(s)	867
MhlI	GDGCHC	1 cut(s)	1073
MluCI	AATT	8 cut(s)	1106, 1179, 1411, 1473, 1798, 1846, 2128, 2235
MlyI	GAGTC	4 cut(s)	449, 877, 1026, 2305
MmeI	TCCRAC	2 cut(s)	18, 1531
Mph1103I	ATGCAT	3 cut(s)	424, 1487, 1861
MroNI	GCCGGC	1 cut(s)	176
MroXI	GAANNNNTTC	1 cut(s)	615
MspA1I	CMGCKG	1 cut(s)	395
MspCI	CTTAAG	1 cut(s)	155
MspI	CCGG	3 cut(s)	177, 878, 2066
MspR9I	CCNGG	3 cut(s)	778, 878, 1687
Mva1269I	GAATGC	3 cut(s)	74, 1046, 1068
MvaI	CCWGG	2 cut(s)	778, 1687
MwoI	GCNNNNNNNGC	9 cut(s)	173, 412, 677, 715, 1004, 1664, 1889, 1898, 2091
NaeI	GCCGGC	1 cut(s)	178
NciI	CCSGG	1 cut(s)	878
NdeI	CATATG	1 cut(s)	288
NdeII	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
NgoMIV	GCCGGC	1 cut(s)	176
NlaIII	CATG	9 cut(s)	245, 320, 366, 414, 1210, 1348, 1489, 1784, 1912
NlaIV	GGNNCC	1 cut(s)	460
NmuCI	GTSAC	3 cut(s)	851, 1117, 1974
NsiI	ATGCAT	3 cut(s)	424, 1487, 1861
NspI	RCATGY	1 cut(s)	1348
PacI	TTAATTAA	1 cut(s)	1476
PagI	TCATGA	1 cut(s)	241
PciI	ACATGT	1 cut(s)	1344
PctI	GAATGC	3 cut(s)	74, 1046, 1068
PdiI	GCCGGC	1 cut(s)	178
PdmI	GAANNNNTTC	1 cut(s)	615
PfeI	GAWTC	9 cut(s)	206, 794, 1127, 1292, 1607, 1630, 1646, 1678, 2105
PfoI	TCCNGGA	1 cut(s)	1685
PkrI	GCNGC	9 cut(s)	285, 397, 625, 720, 1549, 1552, 1739, 1900, 2084
PleI	GAGTC	4 cut(s)	448, 877, 1026, 2304
PpsI	GAGTC	4 cut(s)	448, 877, 1026, 2304
PscI	ACATGT	1 cut(s)	1344
PshAI	GACNNNNGTC	1 cut(s)	1827
PshBI	ATTAAT	2 cut(s)	1476, 2322
Psp6I	CCWGG	2 cut(s)	776, 1685
PspFI	CCCAGC	2 cut(s)	1466, 2225
PspGI	CCWGG	2 cut(s)	776, 1685
PspN4I	GGNNCC	1 cut(s)	460
PspPI	GGNCC	2 cut(s)	145, 875
PsrI	GAACNNNNNNTAC	4 cut(s)	993, 1025, 1750, 1782
PstI	CTGCAG	3 cut(s)	400, 843, 1009
PsuI	RGATCY	1 cut(s)	867
PvuII	CAGCTG	1 cut(s)	395
RsaI	GTAC	4 cut(s)	370, 906, 970, 1969
RsaNI	GTAC	4 cut(s)	369, 905, 969, 1968
SatI	GCNGC	9 cut(s)	284, 396, 624, 719, 1548, 1551, 1738, 1899, 2083
Sau3AI	GATC	9 cut(s)	16, 105, 579, 703, 820, 867, 1369, 1669, 2194
Sau96I	GGNCC	2 cut(s)	145, 875
ScaI	AGTACT	2 cut(s)	370, 906
SchI	GAGTC	4 cut(s)	449, 877, 1026, 2305
ScrFI	CCNGG	3 cut(s)	778, 878, 1687
SduI	GDGCHC	1 cut(s)	1073
SfaNI	GCATC	5 cut(s)	409, 466, 1555, 1846, 1868
SfcI	CTRYAG	3 cut(s)	396, 839, 1005
SmlI	CTYRAG	3 cut(s)	155, 326, 2212
SmoI	CTYRAG	3 cut(s)	155, 326, 2212
SpeI	ACTAGT	2 cut(s)	1619, 2273
Sse9I	AATT	8 cut(s)	1106, 1179, 1411, 1473, 1798, 1846, 2128, 2235
SsiI	CCGC	4 cut(s)	626, 1551, 1667, 1951
StyD4I	CCNGG	3 cut(s)	776, 876, 1685
StyI	CCWWGG	2 cut(s)	2171, 2187
TaaI	ACNGT	4 cut(s)	171, 829, 951, 1946
TaiI	ACGT	2 cut(s)	192, 1998
TaqI	TCGA	4 cut(s)	582, 619, 1198, 1879
TasI	AATT	8 cut(s)	1106, 1179, 1411, 1473, 1798, 1846, 2128, 2235
TatI	WGTACW	2 cut(s)	368, 904
TauI	GCSGC	1 cut(s)	1553
TfiI	GAWTC	9 cut(s)	206, 794, 1127, 1292, 1607, 1630, 1646, 1678, 2105
TscAI	CASTG	4 cut(s)	451, 1249, 1426, 1455
TseFI	GTSAC	3 cut(s)	851, 1117, 1974
TseI	GCWGC	8 cut(s)	283, 395, 623, 718, 1547, 1737, 1898, 2082
Tsp45I	GTSAC	3 cut(s)	851, 1117, 1974
TspDTI	ATGAA	7 cut(s)	146, 198, 230, 399, 549, 1911, 1925
TspGWI	ACGGA	3 cut(s)	368, 1216, 1998
TspRI	CASTG	4 cut(s)	451, 1249, 1426, 1455
Vha464I	CTTAAG	1 cut(s)	155
VneI	GTGCAC	1 cut(s)	1069
VspI	ATTAAT	2 cut(s)	1476, 2322
XapI	RAATTY	4 cut(s)	1179, 1411, 2128, 2235
XbaI	TCTAGA	3 cut(s)	259, 745, 1436
XceI	RCATGY	1 cut(s)	1348
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1721
XmnI	GAANNNNTTC	1 cut(s)	615
ZrmI	AGTACT	2 cut(s)	370, 906
Zsp2I	ATGCAT	3 cut(s)	424, 1487, 1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.