Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0010123

Physical Location & Seq

Genomic Coordinates Reverse (-)

13109865 .. 13115394

Gene Structure 5530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g21710.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGCCCCCTCCTCCTCCTCTTCTTCATCACTTTCAGCACCCACCACCAATCGCCGACGATCGTCGCCGATTCCAGCCTACACACACAGCTAGCTCTAGCTGTTTATATATCTATACATACAGAGAGAGAAACGCAAGAATGGGATGTACTGTGAGAGAGAAGCCCGTGCGCGCCAATCGGAGGATCAAACCCGTCGCCGTGAGAACCAATATCGACCATTGCTGCTACCTCGAGAAAGCTTCAATGGCGAAATCGGTAATCGAAGCGAGTCTGAAGCCCTTCCCTACTCGAAATCCTAATCCGGACGAGGCTGGGTGGGGCTACTGCACTGAGGATCAATTAGAGGAGCTGCTGCTGAAGAATCTGGAGCTTTTATACAACGAGGCGATTTCGAAGCTGGTTGCTTTGGGCTATGGTGAGGACCTTGCGCTCAAGGCGATTCTGAGAAATGGGCATTGTTATGGTGGGATGGATGTGTTGACGAATATTATGCATAACTCTTTGGCTCATTTGAATAGTGATTCCGGGAGTAAGGATGGGAATTCGGAGGATTCGGAGCCGGTTTTCGCTGATTTGAGGCAGTTGGAGGAGTATTCGCTGGCCGGGATGGTGTGTATGTTGCAGCAGGTTAGGCCGAGGTTGAGTAAAGGGGATGCAATGTGGTGTTTGCTGATGAGTGATCTTCATGTGGGGAGGGCGAGCACTATGGAGATTCCGGTGCTTCCTAGCGCGGGGAACGAGAGTGGTGCTGCGGCGGCTGGGAATGTTGAGAGTGGCGGAAATGGGAGCCATTCGGTTGGTGTTATGGCCCCGGCGCTGTGTAGGTTTCATGGCGGGTGGGGTTTTGGGAATGAGGGGAGTTCGGAGTTTCCTGTTCAGGGGTTTTTCTCGAATGGTGCTGAGTTGACTTTGCAGAGGGATATTGAGTGTCCCAAGAGGTTTAATCTTTCGCCTTCGATGAAGTCGTTGTTGAAGAGGAATGTTGCAATGTTTGCAGCTGGTTTTCGAGCAAACTCAAAGCAGTTGCATTCCCAACCGCAGGTTTCCATTAGCAATCTGACGAGTGGGGATGTGGTGGTTGGATTGGGGGATGAAGTCGCGGTCCACCAACCTGAAGAGTCGCAGAAGTCAAAGAACCAGGAGGTGGTTACCTCAGTGTTGAGTAAATTTCGTGATTTGAATCTTGATGAGAATTTGGAACTTGGAGGGGAAGATCAAAAGAATGAGGTGATAGTAACTTTACTTCATCAGGTTAAAGAGCTTGAGAAGCAAGTGAAGGAGCGGAAGGAGTGGGCCCACCAGAAGGCTATGCAAGCTGCAAAAAAGCTTAGTCATGATCTCACAGAGCTTAAAATGCTGAGGATGGAAAGAGAGGAGACTCAAAGGTTGAAGAAAGGGAAACAAACTCTTGAGGACACAACCATGAAGAGGCTCTCCGAGATGGAAAATGCTCTGAGAAAGGCTAGCGGTCAAGTGGACCGGGCAAATGCAGCTGTTAGGCGACTTGAGAATGAGAATGCAGAAATCAGAGCAGAGATGGAGGCTTCTAAACTGAGTGCATCAGAGTCAGTCAACACCTGTTTAGAGGTGGCAAAGAGGGAGAAAAAGTGCCTGAAGAGGCTTTTGGCTTGGGAGAAACAAAAAGGTAAATTGCAGGAAGAGATTGGAGAGGAGAAACAGAAGATTTTAGAATTGCAACAACAGTTAGCTCGTATAAAGCAGGATCAGAAAGAAGCTGAGGTGAAATGGAAGCAGGAGGTGAAGGCTAAGGAGGCAGCCTTGGCACTAGTGGACGAGGAAAGAGTTGCTAAAGAAACAGCTGAAGCTGGTAATAAACGAAAACTTGAGGCCTTGCGCCTAAAGATAGAAATAGATTTCCAACGTCATAAGGATGATCTCCAAAGACTTGAGCAAGAACTCTCGCGTCTAAAATCATCTGCGCAGTCTACCAAATTGCCTCTTCCATCAAATGCTCTGCCAAGAGGAATATCTGGTGGTGCCAAACCTCAAGGAGAAACTATTGCCAAACTGCTTCGTGAGTTAGATAACCTGGAGAATTCTGAAGAGAGAGAAGTCAGCTGCGATAGAGAATGCATGATATGCATGAAAGATGAGGTGTCTGTTGTTTTCCTGCCATGTGCTCATCAAATTCTCTGCGCTAATTGCAATGATGATTATGGCAAGAAAGGTAGAGCTACTTGCCCGTGCTGCCGAGCTCCAATTGAACATAGAATTCGTGTTTTTGGTGCAAGTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

753

Amino Acids

84.03

Weight (kDa)

7.5

Isoelectric Point (pI)

48.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIR2-like_helical	PF20235	121 - 236	1.5e-26	PIR2-like, helical domain
zf-C3HC4_3	PF13920	695 - 743	1.3e-11	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010123)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35330 AT2G35330
fragaria_vesca	FvH4_5g21710 FvH4_5g21710
malus_domestica	MD06G1032100.v1.1
prunus_persica	Prupe.5G040000_v2.0.a1 Prupe.5G040000_v2.0.a1
pyrus_communis	pycom06g02660
rosa_chinensis	RchiOBHm_Chr7g0209211
rosa_laevigata	RLG00000003157
rosa_multiflora	Rmu_sc0001701.1_g000007 Rmu_sc0031054.1_g000002
rosa_roxburghii	Rroxscaffold_3G00249630
rosa_rugosa	Rorug07G0110200 Rorug07G0110300 Rorug07G0110400
rosa_samantha	Rh7AG244300 Rh7BG239500 Rh7CG259800 Rh7DG251100
rosa_wichuraiana	Rw7G020720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1941
Acc36I	ACCTGC	2 cut(s)	616, 1030
AccB1I	GGYRCC	1 cut(s)	1997
AccB7I	CCANNNNNTGG	1 cut(s)	1144
AccBSI	CCGCTC	1 cut(s)	1282
AccI	GTMKAC	1 cut(s)	1946
AccII	CGCG	4 cut(s)	171, 731, 1100, 1924
AccIII	TCCGGA	1 cut(s)	301
AciI	CCGC	9 cut(s)	731, 752, 755, 777, 834, 1037, 1100, 1282, 1467
AclWI	GGATC	3 cut(s)	191, 342, 1731
AcoI	YGGCCR	1 cut(s)	600
AcsI	RAATTY	6 cut(s)	541, 1166, 1192, 2056, 2148, 2232
AcuI	CTGAAG	6 cut(s)	293, 377, 1134, 1634, 1842, 2082
AfaI	GTAC	1 cut(s)	148
AfiI	CCNNNNNNNGG	7 cut(s)	180, 731, 878, 1039, 1144, 1303, 1428
AgsI	TTSAA	6 cut(s)	243, 514, 973, 1180, 1390, 2225
AhlI	ACTAGT	1 cut(s)	1786
AjnI	CCWGG	2 cut(s)	1137, 2049
AjuI	GAANNNNNNNTTGG	2 cut(s)	1607, 1639
Alw21I	GWGCWC	3 cut(s)	704, 2143, 2218
Alw26I	GTCTC	1 cut(s)	1370
AlwI	GGATC	3 cut(s)	191, 342, 1731
Ama87I	CYCGRG	1 cut(s)	230
Aor13HI	TCCGGA	1 cut(s)	301
AoxI	GGCC	5 cut(s)	600, 632, 807, 1293, 1848
ApaI	GGGCCC	1 cut(s)	1297
ApoI	RAATTY	6 cut(s)	541, 1166, 1192, 2056, 2148, 2232
Asp700I	GAANNNNTTC	1 cut(s)	278
AspLEI	GCGC	8 cut(s)	171, 173, 430, 731, 817, 1857, 1942, 2159
AspS9I	GGNCC	6 cut(s)	421, 808, 1102, 1293, 1294, 1477
AsuC2I	CCSGG	4 cut(s)	526, 604, 812, 1481
AsuHPI	GGTGA	4 cut(s)	428, 1240, 1753, 1771
AsuII	TTCGAA	1 cut(s)	392
AsuNHI	GCTAGC	2 cut(s)	89, 1463
AvaI	CYCGRG	1 cut(s)	230
AvaII	GGWCC	3 cut(s)	421, 1102, 1477
BaeGI	GKGCMC	1 cut(s)	1297
BanI	GGYRCC	1 cut(s)	1997
BanII	GRGCYC	2 cut(s)	1297, 2218
BarI	GAAGNNNNNNTAC	2 cut(s)	1227, 1259
Bbv12I	GWGCWC	3 cut(s)	704, 2143, 2218
BbvCI	CCTCAGC	2 cut(s)	1358, 1737
BccI	CCATC	7 cut(s)	463, 530, 601, 1357, 1435, 1531, 1972
BceAI	ACGGC	1 cut(s)	182
BcgI	CGANNNNNNTGC	4 cut(s)	472, 506, 728, 762
BciT130I	CCWGG	2 cut(s)	1139, 2051
BcnI	CCSGG	4 cut(s)	526, 604, 812, 1481
BcoDI	GTCTC	1 cut(s)	1370
BcuI	ACTAGT	1 cut(s)	1786
BfaI	CTAG	5 cut(s)	90, 96, 726, 1464, 1787
BfoI	RGCGCY	1 cut(s)	818
BfuAI	ACCTGC	2 cut(s)	616, 1030
Bme1390I	CCNGG	6 cut(s)	526, 604, 812, 1139, 1481, 2051
Bme18I	GGWCC	3 cut(s)	421, 1102, 1477
BmeT110I	CYCGRG	1 cut(s)	230
BmgT120I	GGNCC	6 cut(s)	421, 808, 1102, 1293, 1294, 1477
BmiI	GGNNCC	5 cut(s)	558, 788, 810, 1295, 1999
BmrFI	CCNGG	6 cut(s)	526, 604, 812, 1139, 1481, 2051
BmsI	GCATC	2 cut(s)	643, 1568
BmtI	GCTAGC	2 cut(s)	93, 1467
BoxI	GACNNNNGTC	1 cut(s)	60
BpmI	CTGGAG	2 cut(s)	386, 2072
Bpu10I	CCTNAGC	3 cut(s)	1358, 1737, 1767
Bpu14I	TTCGAA	1 cut(s)	392
BpuEI	CTTGAG	7 cut(s)	416, 1283, 1430, 1526, 1865, 1928, 1992
BpuMI	CCSGG	4 cut(s)	526, 604, 812, 1481
BsaBI	GATNNNNATC	1 cut(s)	1179
BsaJI	CCNNGG	3 cut(s)	635, 810, 1779
BsaWI	WCCGGW	2 cut(s)	301, 715
BsaXI	ACNNNNNCTCC	2 cut(s)	1592, 1622
Bsc4I	CCNNNNNNNGG	7 cut(s)	180, 731, 878, 1039, 1144, 1303, 1428
Bse118I	RCCGGY	1 cut(s)	559
Bse3DI	GCAATG	4 cut(s)	217, 663, 993, 2173
Bse8I	GATNNNNATC	1 cut(s)	1179
BseAI	TCCGGA	1 cut(s)	301
BseBI	CCWGG	2 cut(s)	1139, 2051
BseDI	CCNNGG	3 cut(s)	635, 810, 1779
BseJI	GATNNNNATC	1 cut(s)	1179
BseLI	CCNNNNNNNGG	7 cut(s)	180, 731, 878, 1039, 1144, 1303, 1428
BseMI	GCAATG	4 cut(s)	217, 663, 993, 2173
BseMII	CTCAG	8 cut(s)	321, 434, 891, 1167, 1349, 1445, 1544, 1728
BsePI	GCGCGC	1 cut(s)	169
BseRI	GAGGAG	5 cut(s)	6, 359, 602, 1388, 1685
BseSI	GKGCMC	1 cut(s)	1297
BseYI	CCCAGC	2 cut(s)	311, 758
BsgI	GTGCAG	1 cut(s)	310
Bsh1236I	CGCG	4 cut(s)	171, 731, 1100, 1924
Bsh1285I	CGRYCG	1 cut(s)	61
BshFI	GGCC	5 cut(s)	602, 634, 809, 1295, 1850
BshNI	GGYRCC	1 cut(s)	1997
BsiEI	CGRYCG	1 cut(s)	61
BsiHKAI	GWGCWC	3 cut(s)	704, 2143, 2218
BsiHKCI	CYCGRG	1 cut(s)	230
BsiSI	CCGG	7 cut(s)	302, 525, 560, 603, 716, 812, 1480
BslFI	GGGAC	1 cut(s)	915
BslI	CCNNNNNNNGG	7 cut(s)	180, 731, 878, 1039, 1144, 1303, 1428
BsmAI	GTCTC	1 cut(s)	1370
BsmFI	GGGAC	1 cut(s)	915
BsmI	GAATGC	3 cut(s)	1027, 1522, 2096
BsnI	GGCC	5 cut(s)	602, 634, 809, 1295, 1850
BsoBI	CYCGRG	1 cut(s)	230
Bsp119I	TTCGAA	1 cut(s)	392
Bsp120I	GGGCCC	1 cut(s)	1293
Bsp1286I	GDGCHC	4 cut(s)	704, 1297, 2143, 2218
Bsp13I	TCCGGA	1 cut(s)	301
Bsp143I	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
BspACI	CCGC	9 cut(s)	731, 752, 755, 777, 834, 1037, 1100, 1282, 1467
BspANI	GGCC	5 cut(s)	602, 634, 809, 1295, 1850
BspCNI	CTCAG	8 cut(s)	322, 435, 892, 1166, 1350, 1446, 1545, 1729
BspEI	TCCGGA	1 cut(s)	301
BspFNI	CGCG	4 cut(s)	171, 731, 1100, 1924
BspHI	TCATGA	1 cut(s)	1333
BspLI	GGNNCC	5 cut(s)	558, 788, 810, 1295, 1999
BspMI	ACCTGC	2 cut(s)	616, 1030
BspOI	GCTAGC	2 cut(s)	93, 1467
BspPI	GGATC	3 cut(s)	191, 342, 1731
BspT104I	TTCGAA	1 cut(s)	392
BspT107I	GGYRCC	1 cut(s)	1997
BsrBI	CCGCTC	1 cut(s)	1282
BsrDI	GCAATG	4 cut(s)	217, 663, 993, 2173
BsrFI	RCCGGY	1 cut(s)	559
BssAI	RCCGGY	1 cut(s)	559
BssECI	CCNNGG	3 cut(s)	635, 810, 1779
BssHII	GCGCGC	1 cut(s)	169
BssMI	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
BssT1I	CCWWGG	1 cut(s)	1779
Bst2UI	CCWGG	2 cut(s)	1139, 2051
Bst4CI	ACNGT	2 cut(s)	151, 1704
Bst6I	CTCTTC	8 cut(s)	24, 968, 1110, 1421, 1610, 1653, 1965, 2058
BstAPI	GCANNNNNTGC	2 cut(s)	992, 2100
BstBI	TTCGAA	1 cut(s)	392
BstC8I	GCNNGC	6 cut(s)	91, 171, 600, 700, 1314, 1465
BstEII	GGTNACC	1 cut(s)	1147
BstFNI	CGCG	4 cut(s)	171, 731, 1100, 1924
BstH2I	RGCGCY	1 cut(s)	818
BstHHI	GCGC	8 cut(s)	171, 173, 430, 731, 817, 1857, 1942, 2159
BstKTI	GATC	8 cut(s)	61, 186, 337, 682, 1216, 1339, 1726, 1897
BstMAI	GTCTC	1 cut(s)	1370
BstMBI	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
BstMCI	CGRYCG	1 cut(s)	61
BstNI	CCWGG	2 cut(s)	1139, 2051
BstPAI	GACNNNNGTC	1 cut(s)	60
BstPI	GGTNACC	1 cut(s)	1147
BstSCI	CCNGG	6 cut(s)	524, 602, 810, 1137, 1479, 2049
BstSLI	GKGCMC	1 cut(s)	1297
BstUI	CGCG	4 cut(s)	171, 731, 1100, 1924
BstXI	CCANNNNNNTGG	1 cut(s)	797
BsuRI	GGCC	5 cut(s)	602, 634, 809, 1295, 1850
BtsIMutI	CAGTG	2 cut(s)	327, 1161
BveI	ACCTGC	2 cut(s)	616, 1030
Cac8I	GCNNGC	6 cut(s)	91, 171, 600, 700, 1314, 1465
CciI	TCATGA	1 cut(s)	1333
CfoI	GCGC	8 cut(s)	171, 173, 430, 731, 817, 1857, 1942, 2159
Cfr10I	RCCGGY	1 cut(s)	559
Cfr13I	GGNCC	6 cut(s)	421, 808, 1102, 1293, 1294, 1477
CseI	GACGC	1 cut(s)	1913
Csp6I	GTAC	1 cut(s)	147
CviAII	CATG	7 cut(s)	686, 830, 1334, 1423, 2095, 2104, 2136
CviQI	GTAC	1 cut(s)	147
DpnI	GATC	8 cut(s)	60, 185, 336, 681, 1215, 1338, 1725, 1896
DpnII	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
EaeI	YGGCCR	1 cut(s)	600
Eam1104I	CTCTTC	8 cut(s)	24, 968, 1110, 1421, 1610, 1653, 1965, 2058
EarI	CTCTTC	8 cut(s)	24, 968, 1110, 1421, 1610, 1653, 1965, 2058
EciI	GGCGGA	1 cut(s)	792
Ecl136II	GAGCTC	1 cut(s)	2216
Eco130I	CCWWGG	1 cut(s)	1779
Eco147I	AGGCCT	1 cut(s)	1850
Eco24I	GRGCYC	2 cut(s)	1297, 2218
Eco47I	GGWCC	3 cut(s)	421, 1102, 1477
Eco53kI	GAGCTC	1 cut(s)	2216
Eco57I	CTGAAG	6 cut(s)	293, 377, 1134, 1634, 1842, 2082
Eco88I	CYCGRG	1 cut(s)	230
Eco91I	GGTNACC	1 cut(s)	1147
EcoICRI	GAGCTC	1 cut(s)	2216
EcoO109I	RGGNCCY	1 cut(s)	421
EcoO65I	GGTNACC	1 cut(s)	1147
EcoRI	GAATTC	3 cut(s)	541, 2056, 2232
EcoRII	CCWGG	2 cut(s)	1137, 2049
EcoT14I	CCWWGG	1 cut(s)	1779
EcoT22I	ATGCAT	3 cut(s)	495, 2096, 2105
EcoT38I	GRGCYC	2 cut(s)	1297, 2218
ErhI	CCWWGG	1 cut(s)	1779
FaeI	CATG	7 cut(s)	689, 833, 1337, 1426, 2098, 2107, 2139
FaqI	GGGAC	1 cut(s)	915
FatI	CATG	7 cut(s)	685, 829, 1333, 1422, 2094, 2103, 2135
FauI	CCCGC	2 cut(s)	724, 827
FblI	GTMKAC	1 cut(s)	1946
FriOI	GRGCYC	2 cut(s)	1297, 2218
FspBI	CTAG	5 cut(s)	90, 96, 726, 1464, 1787
FspI	TGCGCA	1 cut(s)	1941
GlaI	GCGC	8 cut(s)	170, 172, 429, 730, 816, 1856, 1941, 2158
GsaI	CCCAGC	2 cut(s)	315, 762
GsuI	CTGGAG	2 cut(s)	386, 2072
HaeII	RGCGCY	1 cut(s)	818
HaeIII	GGCC	5 cut(s)	602, 634, 809, 1295, 1850
HapII	CCGG	7 cut(s)	302, 525, 560, 603, 716, 812, 1480
HgaI	GACGC	1 cut(s)	1913
HhaI	GCGC	8 cut(s)	171, 173, 430, 731, 817, 1857, 1942, 2159
Hin1II	CATG	7 cut(s)	689, 833, 1337, 1426, 2098, 2107, 2139
Hin6I	GCGC	8 cut(s)	169, 171, 428, 729, 815, 1855, 1940, 2157
HinP1I	GCGC	8 cut(s)	169, 171, 428, 729, 815, 1855, 1940, 2157
HincII	GTYRAC	3 cut(s)	480, 906, 1573
HindII	GTYRAC	3 cut(s)	480, 906, 1573
HindIII	AAGCTT	2 cut(s)	237, 1325
HpaII	CCGG	7 cut(s)	302, 525, 560, 603, 716, 812, 1480
HphI	GGTGA	4 cut(s)	428, 1240, 1753, 1771
Hpy166II	GTNNAC	7 cut(s)	480, 906, 1105, 1477, 1573, 1792, 1947
Hpy188III	TCNNGA	9 cut(s)	232, 302, 365, 889, 1172, 1184, 1334, 1409, 2036
Hpy8I	GTNNAC	7 cut(s)	480, 906, 1105, 1477, 1573, 1792, 1947
Hpy99I	CGWCG	3 cut(s)	59, 66, 197
HpyAV	CCTTC	6 cut(s)	289, 963, 1270, 1279, 1297, 1756
HpyCH4III	ACNGT	2 cut(s)	151, 1704
HpyCH4IV	ACGT	1 cut(s)	1882
HpySE526I	ACGT	1 cut(s)	1882
Hsp92II	CATG	7 cut(s)	689, 833, 1337, 1426, 2098, 2107, 2139
HspAI	GCGC	8 cut(s)	169, 171, 428, 729, 815, 1855, 1940, 2157
Kpn2I	TCCGGA	1 cut(s)	301
Kzo9I	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
LmnI	GCTCC	6 cut(s)	346, 367, 556, 786, 1279, 2221
LweI	GCATC	2 cut(s)	643, 1568
MaeI	CTAG	5 cut(s)	90, 96, 726, 1464, 1787
MaeII	ACGT	1 cut(s)	1882
MaeIII	GTNAC	2 cut(s)	1147, 1234
MalI	GATC	8 cut(s)	60, 185, 336, 681, 1215, 1338, 1725, 1896
MbiI	CCGCTC	1 cut(s)	1282
MboI	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
MfeI	CAATTG	1 cut(s)	2220
MhlI	GDGCHC	4 cut(s)	704, 1297, 2143, 2218
MlyI	GAGTC	4 cut(s)	277, 1127, 1372, 1574
MmeI	TCCRAC	3 cut(s)	564, 1060, 1903
Mph1103I	ATGCAT	3 cut(s)	495, 2096, 2105
MroI	TCCGGA	1 cut(s)	301
MroXI	GAANNNNTTC	1 cut(s)	278
MseI	TTAA	3 cut(s)	942, 1254, 1350
MslI	CAYNNNNRTG	3 cut(s)	459, 1421, 1890
MspA1I	CMGCKG	4 cut(s)	998, 1493, 1820, 2079
MspI	CCGG	7 cut(s)	302, 525, 560, 603, 716, 812, 1480
MspR9I	CCNGG	6 cut(s)	526, 604, 812, 1139, 1481, 2051
MunI	CAATTG	1 cut(s)	2220
Mva1269I	GAATGC	3 cut(s)	1027, 1522, 2096
MvaI	CCWGG	2 cut(s)	1139, 2051
MvnI	CGCG	4 cut(s)	171, 731, 1100, 1924
NciI	CCSGG	4 cut(s)	526, 604, 812, 1481
NdeII	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
NheI	GCTAGC	2 cut(s)	89, 1463
NlaIII	CATG	7 cut(s)	689, 833, 1337, 1426, 2098, 2107, 2139
NlaIV	GGNNCC	5 cut(s)	558, 788, 810, 1295, 1999
NmeAIII	GCCGAG	2 cut(s)	660, 2237
NsbI	TGCGCA	1 cut(s)	1941
NsiI	ATGCAT	3 cut(s)	495, 2096, 2105
NspV	TTCGAA	1 cut(s)	392
PaeR7I	CTCGAG	1 cut(s)	230
PagI	TCATGA	1 cut(s)	1333
PauI	GCGCGC	1 cut(s)	169
PceI	AGGCCT	1 cut(s)	1850
PcsI	WCGNNNNNNNCGW	1 cut(s)	962
PctI	GAATGC	3 cut(s)	1027, 1522, 2096
PdmI	GAANNNNTTC	1 cut(s)	278
PfeI	GAWTC	7 cut(s)	69, 361, 439, 521, 551, 712, 1180
PflMI	CCANNNNNTGG	1 cut(s)	1144
PfoI	TCCNGGA	1 cut(s)	524
Ple19I	CGATCG	1 cut(s)	61
PleI	GAGTC	4 cut(s)	276, 1126, 1372, 1573
PpsI	GAGTC	4 cut(s)	276, 1126, 1372, 1573
PpuMI	RGGWCCY	1 cut(s)	421
PshAI	GACNNNNGTC	1 cut(s)	60
Psp124BI	GAGCTC	1 cut(s)	2218
Psp5II	RGGWCCY	1 cut(s)	421
Psp6I	CCWGG	2 cut(s)	1137, 2049
PspEI	GGTNACC	1 cut(s)	1147
PspFI	CCCAGC	2 cut(s)	311, 758
PspGI	CCWGG	2 cut(s)	1137, 2049
PspN4I	GGNNCC	5 cut(s)	558, 788, 810, 1295, 1999
PspOMI	GGGCCC	1 cut(s)	1293
PspPI	GGNCC	6 cut(s)	421, 808, 1102, 1293, 1294, 1477
PspPPI	RGGWCCY	1 cut(s)	421
PteI	GCGCGC	1 cut(s)	169
PvuI	CGATCG	1 cut(s)	61
PvuII	CAGCTG	4 cut(s)	998, 1493, 1820, 2079
RsaI	GTAC	1 cut(s)	148
RsaNI	GTAC	1 cut(s)	147
RseI	CAYNNNNRTG	3 cut(s)	459, 1421, 1890
SacI	GAGCTC	1 cut(s)	2218
SaqAI	TTAA	3 cut(s)	942, 1254, 1350
Sau3AI	GATC	8 cut(s)	58, 183, 334, 679, 1213, 1336, 1723, 1894
Sau96I	GGNCC	6 cut(s)	421, 808, 1102, 1293, 1294, 1477
SchI	GAGTC	4 cut(s)	277, 1127, 1372, 1574
ScrFI	CCNGG	6 cut(s)	526, 604, 812, 1139, 1481, 2051
SduI	GDGCHC	4 cut(s)	704, 1297, 2143, 2218
SfaNI	GCATC	2 cut(s)	643, 1568
Sfr274I	CTCGAG	1 cut(s)	230
SfuI	TTCGAA	1 cut(s)	392
SinI	GGWCC	3 cut(s)	421, 1102, 1477
SlaI	CTCGAG	1 cut(s)	230
SmiMI	CAYNNNNRTG	3 cut(s)	459, 1421, 1890
SmlI	CTYRAG	8 cut(s)	230, 431, 1262, 1409, 1505, 1844, 1907, 2007
SmoI	CTYRAG	8 cut(s)	230, 431, 1262, 1409, 1505, 1844, 1907, 2007
SpeI	ACTAGT	1 cut(s)	1786
SseBI	AGGCCT	1 cut(s)	1850
SsiI	CCGC	9 cut(s)	731, 752, 755, 777, 834, 1037, 1100, 1282, 1467
SspI	AATATT	1 cut(s)	487
SspMI	CTAG	5 cut(s)	90, 96, 726, 1464, 1787
SstI	GAGCTC	1 cut(s)	2218
StuI	AGGCCT	1 cut(s)	1850
StyD4I	CCNGG	6 cut(s)	524, 602, 810, 1137, 1479, 2049
StyI	CCWWGG	1 cut(s)	1779
TaaI	ACNGT	2 cut(s)	151, 1704
TaiI	ACGT	1 cut(s)	1885
TaqI	TCGA	8 cut(s)	213, 231, 261, 289, 392, 890, 956, 1006
TatI	WGTACW	1 cut(s)	146
TauI	GCSGC	2 cut(s)	755, 758
TfiI	GAWTC	7 cut(s)	69, 361, 439, 521, 551, 712, 1180
Tru1I	TTAA	3 cut(s)	942, 1254, 1350
Tru9I	TTAA	3 cut(s)	942, 1254, 1350
TscAI	CASTG	2 cut(s)	334, 1161
TspDTI	ATGAA	8 cut(s)	14, 674, 818, 974, 1107, 1235, 1439, 2120
TspRI	CASTG	2 cut(s)	334, 1161
Van91I	CCANNNNNTGG	1 cut(s)	1144
VpaK11BI	GGWCC	3 cut(s)	421, 1102, 1477
XapI	RAATTY	6 cut(s)	541, 1166, 1192, 2056, 2148, 2232
XhoI	CTCGAG	1 cut(s)	230
XmiI	GTMKAC	1 cut(s)	1946
XmnI	GAANNNNTTC	1 cut(s)	278
XspI	CTAG	5 cut(s)	90, 96, 726, 1464, 1787
Zsp2I	ATGCAT	3 cut(s)	495, 2096, 2105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.