Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0010123

Physical Location & Seq

Genomic Coordinates Forward (+)

4408833 .. 4415051

Gene Structure 6219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G040000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGGTTGCACTGTGAGAGAGAAGCACATCCGTACAAATCGTAGGCCCCGATCTGCAAAACCCGATTTCGATTATTGTTGCCACATTGATAGAGCATCAATCTCTAAATCCATACTCGAATCGGGTCTCAAACCATTCAATCACCATCTGGGTTCCAACAACGATTCCACCCAGAACCCTAAATCGAGCCCAAGCCCCAACTCCAATTTCGATGAGAGTGGGTGGGGTTACTGCACTGAGGAACAATTAGAAGAAATTCTTTTGAAGAATTTAGAATTTTTGTACAATGAGGCTATTTCTAAGCTAGTTGCATTGGGTTATGATGAGGATGCTGCGCTTAAAGCGATATTGAGAAATGGGCACTGCTATGGTGGCATGGATGTGCTGACCAACATTTTGCATAACTCATTGGCTTATTTGAATAGTAATTGTGGTAGCAGTAATGGGAAGTCGGATGAGGCTGAGCCCGTTTTTGCTGACTTGAGGCAGTTAGAGGAGTACTCGCTTGCGGGTATGGTGTGTATGTTGCAGCAAGTTAGACCACATTTGAGTAAAGGTGATGCCATGTGGTGTTTGCTTATGAGTGATCTTCATGTGGGTCGAGCAAGTACTATGGAAATTCCTGTGCTTCCCGGAGGAGGTATTGAAAATAGTAGTTCGATATCTACTAGTGTTGAGTCTGGTAGTAATGGTAACCATTCAGTTGGTGTTATGGCTCCGGCTCTTTGTAGGTTTCATGGTGGTTGGGGGTTTGGAAATGGGGGAAGTTCAGAGTTTCCTGTTCATGGGTTTTTCCCTTATGGTGCTGAGTTGACTTTGCAAAGGGATATTGAGTGTCCCAAGAGGTTTAACCTTTCTCCTTCAATGAAGTCATTGTTGAAAAGGAATGTTGCAATATTTGCAGCTGGTTTTCGAGCAAACTCAAAACAGTTAAATGCACAACCACAGGGTTGCCTGAGTAATTTGGCGAGTGGGGATACCCCGGTTGCACTGGAGTCTGAAGTTCCGGTTCAGCAGTCTGAGAAAGCACGAAATTCGAAGAACCAGGAGGTGGTTAACTCAGTGATGAGTAAGTTTCGTGATTTGAATCTTGATGAGAATTTAGAGTTTGTGGGGGAAGATCAAAAGAATGAGGTGATAGTAAATCTTCTTCATCAGGTTGAAGAGCTTGAGAAGCAAGTTAAGGACCGGAAGGAGTGGGCCCACCAAAAGGCTATGCAAGCTGCAACAAAGCTCAGCCACGACCTGGCAGAGCTTAAAATGCTGAGGCTTGAAAGGGAGGAGACTCAAAGGTTGAAGAAAGGGAAACAAACTCTCGAGGACTCAACTATGAAGAGACTATCGGAGATGGAGAATGCATTAAGAAAGGCCAGTGGTCAAGTGGACAGGGCAAATGCAGCTGTGAGACGGCTTGAGACTGAGAATGCAGAAATTAGAGCAGAGATGGAGGCTTCTAAACTGAGTGCTTCAGAGTCAGTCTTAACCTGTTTGGAGGTTGCAAAGAGGGAGAAAAAGTGCCTGAAGAGGATGTTGGCATGGGAGAAACAAAAAATTAAACTGCAGGAAGAGATTGCAGAGGAGAAAGAGAAGATTTCAGAATTGCAACAACATTTGGCTCGGATGAAGCATGATCAGAAAGAAGCTGAGGTGAAATGGGGGCAGGAGCTGAAGGCTAAGGAGGAAGCCTTAGCACAAGTGGAAGAGGAACGACGTGCTAAGGAAGCAGCTGAGGCTAGCAATAAACGAAAGCTTGAGGCTCTGCGCCTAAAGATAGAAATAGATTTCCAGCGTCACAAGGATGACCTCCAAAGACTTGAGCAGGAACTCTCACGCCTAAAAATATCTGCCCAGTCTACCGAATTGCTTCATCCATCAAATGCTTTGCCAAAAGCAATTTCTGAGGGTGCAAAACCCCAAGGAGAAACTATTGCTAAGCTGCTTCGTGAATTAGATAACCTGGAGAATTCATCAGAGAAAGAAGTCAGCTGTGATAGGGAATGCATAATTTGTATGAAAGATGAAGTCTCCGTTGTTTTCCTGCCATGTGCTCATCAAGTTCTTTGTGCCAATTGCAATGATGATTATGGGAAAAAAGGTAAAGTGACCTGCCCGTGTTGCCGGGCTCCCATTGAACATAGGATTCGTGTTTTTGGTGCAAGTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

722

Amino Acids

80.64

Weight (kDa)

6.26

Isoelectric Point (pI)

51.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010123)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35330 AT2G35330
fragaria_vesca	FvH4_5g21710 FvH4_5g21710
malus_domestica	MD06G1032100.v1.1
prunus_persica	Prupe.5G040000_v2.0.a1 Prupe.5G040000_v2.0.a1
pyrus_communis	pycom06g02660
rosa_chinensis	RchiOBHm_Chr7g0209211
rosa_laevigata	RLG00000003157
rosa_multiflora	Rmu_sc0001701.1_g000007 Rmu_sc0031054.1_g000002
rosa_roxburghii	Rroxscaffold_3G00249630
rosa_rugosa	Rorug07G0110200 Rorug07G0110300 Rorug07G0110400
rosa_samantha	Rh7AG244300 Rh7BG239500 Rh7CG259800 Rh7DG251100
rosa_wichuraiana	Rw7G020720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2114
AccB7I	CCANNNNNTGG	2 cut(s)	1051, 1246
AccI	GTMKAC	1 cut(s)	1853
AciI	CCGC	1 cut(s)	509
AcsI	RAATTY	7 cut(s)	255, 268, 275, 618, 1033, 1099, 1963
AcuI	CTGAAG	4 cut(s)	1020, 1452, 1541, 1688
AfaI	GTAC	4 cut(s)	34, 284, 500, 610
AfiI	CCNNNNNNNGG	5 cut(s)	638, 785, 1051, 1210, 1246
AhlI	ACTAGT	1 cut(s)	668
AjiI	CACGTC	1 cut(s)	1712
AjnI	CCWGG	3 cut(s)	1044, 1245, 1956
AjuI	GAANNNNNNNTTGG	6 cut(s)	191, 223, 1514, 1546, 1879, 1911
Alw21I	GWGCWC	1 cut(s)	2050
Alw26I	GTCTC	6 cut(s)	131, 1277, 1330, 1399, 1409, 2029
AlwNI	CAGNNNCTG	1 cut(s)	1666
Ama87I	CYCGRG	1 cut(s)	1316
AoxI	GGCC	3 cut(s)	44, 1200, 1368
ApaI	GGGCCC	1 cut(s)	1204
ApeKI	GCWGC	7 cut(s)	332, 529, 902, 1223, 1397, 1724, 1936
ApoI	RAATTY	7 cut(s)	255, 268, 275, 618, 1033, 1099, 1963
ArsI	GACNNNNNNTTYG	2 cut(s)	379, 411
Asp700I	GAANNNNTTC	2 cut(s)	255, 1863
AspLEI	GCGC	2 cut(s)	337, 1764
AspS9I	GGNCC	4 cut(s)	45, 1186, 1200, 1201
AsuC2I	CCSGG	3 cut(s)	633, 983, 2120
AsuHPI	GGTGA	4 cut(s)	134, 569, 1147, 1660
AsuII	TTCGAA	1 cut(s)	1037
AsuNHI	GCTAGC	1 cut(s)	1733
AvaI	CYCGRG	1 cut(s)	1316
AvaII	GGWCC	1 cut(s)	1186
BaeGI	GKGCMC	2 cut(s)	363, 1204
BaeI	ACNNNNGTAYC	2 cut(s)	969, 1002
BanII	GRGCYC	4 cut(s)	191, 468, 1204, 2125
BarI	GAAGNNNNNNTAC	2 cut(s)	1134, 1166
Bbv12I	GWGCWC	1 cut(s)	2050
BbvCI	CCTCAGC	3 cut(s)	1265, 1644, 1728
BbvI	GCAGC	7 cut(s)	319, 541, 914, 1210, 1409, 1736, 1923
BccI	CCATC	4 cut(s)	153, 1342, 1438, 1879
BceAI	ACGGC	1 cut(s)	1424
BcgI	CGANNNNNNTGC	2 cut(s)	1017, 1051
BciT130I	CCWGG	3 cut(s)	1046, 1247, 1958
BciVI	GTATCC	1 cut(s)	970
BclI	TGATCA	1 cut(s)	1630
BcnI	CCSGG	3 cut(s)	633, 983, 2120
BcoDI	GTCTC	6 cut(s)	131, 1277, 1330, 1399, 1409, 2029
BcuI	ACTAGT	1 cut(s)	668
BfaI	CTAG	3 cut(s)	305, 669, 1734
BfmI	CTRYAG	1 cut(s)	1559
BfuAI	ACCTGC	1 cut(s)	2114
BfuI	GTATCC	1 cut(s)	970
BisI	GCNGC	7 cut(s)	333, 530, 903, 1224, 1398, 1725, 1937
BlpI	GCTNAGC	3 cut(s)	462, 1235, 1932
BlsI	GCNGC	7 cut(s)	334, 531, 904, 1225, 1399, 1726, 1938
BmcAI	AGTACT	2 cut(s)	500, 610
Bme1390I	CCNGG	6 cut(s)	633, 983, 1046, 1247, 1958, 2120
Bme18I	GGWCC	1 cut(s)	1186
BmeT110I	CYCGRG	1 cut(s)	1316
BmgBI	CACGTC	1 cut(s)	1712
BmgT120I	GGNCC	4 cut(s)	45, 1186, 1200, 1201
BmiI	GGNNCC	5 cut(s)	47, 154, 717, 1202, 2124
BmrFI	CCNGG	6 cut(s)	633, 983, 1046, 1247, 1958, 2120
BmrI	ACTGGG	1 cut(s)	1843
BmsI	GCATC	3 cut(s)	104, 319, 550
BmtI	GCTAGC	1 cut(s)	1737
BmuI	ACTGGG	1 cut(s)	1843
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
BpmI	CTGGAG	2 cut(s)	1013, 1979
Bpu10I	CCTNAGC	6 cut(s)	1265, 1644, 1674, 1687, 1716, 1728
Bpu1102I	GCTNAGC	3 cut(s)	462, 1235, 1932
Bpu14I	TTCGAA	1 cut(s)	1037
BpuEI	CTTGAG	5 cut(s)	502, 1190, 1433, 1772, 1835
BpuMI	CCSGG	3 cut(s)	633, 983, 2120
BsaBI	GATNNNNATC	1 cut(s)	1086
BsaI	GGTCTC	1 cut(s)	131
BsaJI	CCNNGG	2 cut(s)	981, 1915
BsaWI	WCCGGW	2 cut(s)	1006, 1188
BsaXI	ACNNNNNCTCC	2 cut(s)	1499, 1529
Bsc4I	CCNNNNNNNGG	5 cut(s)	638, 785, 1051, 1210, 1246
Bse1I	ACTGG	3 cut(s)	996, 1371, 1849
Bse3DI	GCAATG	1 cut(s)	2080
Bse8I	GATNNNNATC	1 cut(s)	1086
BseBI	CCWGG	3 cut(s)	1046, 1247, 1958
BseDI	CCNNGG	2 cut(s)	981, 1915
BseGI	GGATG	8 cut(s)	27, 334, 385, 460, 1533, 1626, 1804, 1867
BseJI	GATNNNNATC	1 cut(s)	1086
BseLI	CCNNNNNNNGG	5 cut(s)	638, 785, 1051, 1210, 1246
BseMI	GCAATG	1 cut(s)	2080
BseNI	ACTGG	3 cut(s)	996, 1371, 1849
BseRI	GAGGAG	4 cut(s)	509, 651, 1295, 1592
BseSI	GKGCMC	2 cut(s)	363, 1204
BseXI	GCAGC	7 cut(s)	319, 541, 914, 1210, 1409, 1736, 1923
BsgI	GTGCAG	1 cut(s)	217
BshFI	GGCC	3 cut(s)	46, 1202, 1370
BsiHKAI	GWGCWC	1 cut(s)	2050
BsiHKCI	CYCGRG	1 cut(s)	1316
BsiSI	CCGG	6 cut(s)	633, 719, 983, 1007, 1189, 2119
BslFI	GGGAC	1 cut(s)	822
BslI	CCNNNNNNNGG	5 cut(s)	638, 785, 1051, 1210, 1246
BsmAI	GTCTC	6 cut(s)	131, 1277, 1330, 1399, 1409, 2029
BsmBI	CGTCTC	1 cut(s)	1399
BsmFI	GGGAC	1 cut(s)	822
BsmI	GAATGC	3 cut(s)	1360, 1429, 2003
BsnI	GGCC	3 cut(s)	46, 1202, 1370
Bso31I	GGTCTC	1 cut(s)	131
BsoBI	CYCGRG	1 cut(s)	1316
Bsp119I	TTCGAA	1 cut(s)	1037
Bsp120I	GGGCCC	1 cut(s)	1200
Bsp1286I	GDGCHC	6 cut(s)	191, 363, 468, 1204, 2050, 2125
Bsp1407I	TGTACA	1 cut(s)	282
Bsp143I	GATC	4 cut(s)	50, 586, 1120, 1630
Bsp1720I	GCTNAGC	3 cut(s)	462, 1235, 1932
BspACI	CCGC	1 cut(s)	509
BspANI	GGCC	3 cut(s)	46, 1202, 1370
BspLI	GGNNCC	5 cut(s)	47, 154, 717, 1202, 2124
BspMAI	CTGCAG	1 cut(s)	1563
BspMI	ACCTGC	1 cut(s)	2114
BspOI	GCTAGC	1 cut(s)	1737
BspQI	GCTCTTC	1 cut(s)	1158
BspT104I	TTCGAA	1 cut(s)	1037
BspTNI	GGTCTC	1 cut(s)	131
BsrDI	GCAATG	1 cut(s)	2080
BsrGI	TGTACA	1 cut(s)	282
BsrI	ACTGG	3 cut(s)	996, 1371, 1849
BssECI	CCNNGG	2 cut(s)	981, 1915
BssMI	GATC	4 cut(s)	50, 586, 1120, 1630
BssT1I	CCWWGG	1 cut(s)	1915
Bst2UI	CCWGG	3 cut(s)	1046, 1247, 1958
Bst4CI	ACNGT	2 cut(s)	13, 930
Bst6I	CTCTTC	5 cut(s)	1158, 1328, 1517, 1560, 1695
BstAPI	GCANNNNNTGC	1 cut(s)	899
BstAUI	TGTACA	1 cut(s)	282
BstBI	TTCGAA	1 cut(s)	1037
BstC8I	GCNNGC	3 cut(s)	507, 1221, 1735
BstEII	GGTNACC	1 cut(s)	692
BstF5I	GGATG	8 cut(s)	27, 334, 385, 460, 1533, 1626, 1804, 1867
BstHHI	GCGC	2 cut(s)	337, 1764
BstKTI	GATC	4 cut(s)	53, 589, 1123, 1633
BstMAI	GTCTC	6 cut(s)	131, 1277, 1330, 1399, 1409, 2029
BstMBI	GATC	4 cut(s)	50, 586, 1120, 1630
BstNI	CCWGG	3 cut(s)	1046, 1247, 1958
BstPI	GGTNACC	1 cut(s)	692
BstSCI	CCNGG	6 cut(s)	631, 981, 1044, 1245, 1956, 2118
BstSFI	CTRYAG	1 cut(s)	1559
BstSLI	GKGCMC	2 cut(s)	363, 1204
BstV1I	GCAGC	7 cut(s)	319, 541, 914, 1210, 1409, 1736, 1923
BstXI	CCANNNNNNTGG	1 cut(s)	704
BsuI	GTATCC	1 cut(s)	970
BsuRI	GGCC	3 cut(s)	46, 1202, 1370
BtrI	CACGTC	1 cut(s)	1712
BtsCI	GGATG	8 cut(s)	27, 334, 385, 460, 1533, 1626, 1804, 1867
BtsI	GCAGTG	1 cut(s)	361
BtsIMutI	CAGTG	6 cut(s)	9, 234, 361, 989, 1068, 1378
BveI	ACCTGC	1 cut(s)	2114
Cac8I	GCNNGC	3 cut(s)	507, 1221, 1735
CaiI	CAGNNNCTG	1 cut(s)	1666
CfoI	GCGC	2 cut(s)	337, 1764
Cfr13I	GGNCC	4 cut(s)	45, 1186, 1200, 1201
CseI	GACGC	1 cut(s)	1778
Csp6I	GTAC	4 cut(s)	33, 283, 499, 609
CviAII	CATG	8 cut(s)	376, 565, 593, 737, 785, 1536, 1628, 2043
CviQI	GTAC	4 cut(s)	33, 283, 499, 609
DpnI	GATC	4 cut(s)	52, 588, 1122, 1632
DpnII	GATC	4 cut(s)	50, 586, 1120, 1630
Eam1104I	CTCTTC	5 cut(s)	1158, 1328, 1517, 1560, 1695
EarI	CTCTTC	5 cut(s)	1158, 1328, 1517, 1560, 1695
Eco130I	CCWWGG	1 cut(s)	1915
Eco24I	GRGCYC	4 cut(s)	191, 468, 1204, 2125
Eco31I	GGTCTC	1 cut(s)	131
Eco32I	GATATC	1 cut(s)	663
Eco47I	GGWCC	1 cut(s)	1186
Eco57I	CTGAAG	4 cut(s)	1020, 1452, 1541, 1688
Eco88I	CYCGRG	1 cut(s)	1316
Eco91I	GGTNACC	1 cut(s)	692
EcoO109I	RGGNCCY	1 cut(s)	45
EcoO65I	GGTNACC	1 cut(s)	692
EcoRI	GAATTC	1 cut(s)	1963
EcoRII	CCWGG	3 cut(s)	1044, 1245, 1956
EcoRV	GATATC	1 cut(s)	663
EcoT14I	CCWWGG	1 cut(s)	1915
EcoT22I	ATGCAT	2 cut(s)	1360, 2003
EcoT38I	GRGCYC	4 cut(s)	191, 468, 1204, 2125
ErhI	CCWWGG	1 cut(s)	1915
Esp3I	CGTCTC	1 cut(s)	1399
FaeI	CATG	8 cut(s)	379, 568, 596, 740, 788, 1539, 1631, 2046
FalI	AAGNNNNNCTT	2 cut(s)	243, 275
FaqI	GGGAC	1 cut(s)	822
FatI	CATG	8 cut(s)	375, 564, 592, 736, 784, 1535, 1627, 2042
FauI	CCCGC	1 cut(s)	502
FbaI	TGATCA	1 cut(s)	1630
FblI	GTMKAC	1 cut(s)	1853
Fnu4HI	GCNGC	7 cut(s)	333, 530, 903, 1224, 1398, 1725, 1937
FokI	GGATG	8 cut(s)	14, 341, 392, 467, 1540, 1633, 1811, 1854
FriOI	GRGCYC	4 cut(s)	191, 468, 1204, 2125
Fsp4HI	GCNGC	7 cut(s)	333, 530, 903, 1224, 1398, 1725, 1937
FspBI	CTAG	3 cut(s)	305, 669, 1734
GlaI	GCGC	2 cut(s)	336, 1763
GluI	GCNGC	7 cut(s)	333, 530, 903, 1224, 1398, 1725, 1937
GsuI	CTGGAG	2 cut(s)	1013, 1979
HaeIII	GGCC	3 cut(s)	46, 1202, 1370
HapII	CCGG	6 cut(s)	633, 719, 983, 1007, 1189, 2119
HgaI	GACGC	1 cut(s)	1778
HhaI	GCGC	2 cut(s)	337, 1764
Hin1II	CATG	8 cut(s)	379, 568, 596, 740, 788, 1539, 1631, 2046
Hin6I	GCGC	2 cut(s)	335, 1762
HinP1I	GCGC	2 cut(s)	335, 1762
HincII	GTYRAC	2 cut(s)	813, 1057
HindII	GTYRAC	2 cut(s)	813, 1057
HindIII	AAGCTT	1 cut(s)	1748
HinfI	GANTC	9 cut(s)	119, 164, 677, 995, 1087, 1285, 1322, 1472, 2140
HpaI	GTTAAC	1 cut(s)	1057
HpaII	CCGG	6 cut(s)	633, 719, 983, 1007, 1189, 2119
HphI	GGTGA	4 cut(s)	134, 569, 1147, 1660
Hpy166II	GTNNAC	4 cut(s)	813, 1057, 1384, 1854
Hpy188III	TCNNGA	4 cut(s)	1079, 1091, 1316, 1943
Hpy8I	GTNNAC	4 cut(s)	813, 1057, 1384, 1854
Hpy99I	CGWCG	1 cut(s)	1713
HpyAV	CCTTC	3 cut(s)	870, 1186, 1663
HpyCH4III	ACNGT	2 cut(s)	13, 930
HpyCH4IV	ACGT	1 cut(s)	1711
HpySE526I	ACGT	1 cut(s)	1711
Hsp92II	CATG	8 cut(s)	379, 568, 596, 740, 788, 1539, 1631, 2046
HspAI	GCGC	2 cut(s)	335, 1762
Ksp22I	TGATCA	1 cut(s)	1630
KspAI	GTTAAC	1 cut(s)	1057
Kzo9I	GATC	4 cut(s)	50, 586, 1120, 1630
LguI	GCTCTTC	1 cut(s)	1158
LmnI	GCTCC	3 cut(s)	721, 1663, 2128
Lsp1109I	GCAGC	7 cut(s)	319, 541, 914, 1210, 1409, 1736, 1923
LweI	GCATC	3 cut(s)	104, 319, 550
MaeI	CTAG	3 cut(s)	305, 669, 1734
MaeII	ACGT	1 cut(s)	1711
MaeIII	GTNAC	4 cut(s)	227, 692, 1790, 2101
MalI	GATC	4 cut(s)	52, 588, 1122, 1632
MboI	GATC	4 cut(s)	50, 586, 1120, 1630
MfeI	CAATTG	1 cut(s)	2068
MhlI	GDGCHC	6 cut(s)	191, 363, 468, 1204, 2050, 2125
MlyI	GAGTC	5 cut(s)	686, 1004, 1279, 1316, 1481
MmeI	TCCRAC	2 cut(s)	180, 432
Mph1103I	ATGCAT	2 cut(s)	1360, 2003
MroXI	GAANNNNTTC	2 cut(s)	255, 1863
MseI	TTAA	9 cut(s)	339, 849, 932, 1056, 1182, 1257, 1361, 1481, 1554
MslI	CAYNNNNRTG	3 cut(s)	366, 380, 1797
MspA1I	CMGCKG	4 cut(s)	905, 1400, 1727, 1986
MspI	CCGG	6 cut(s)	633, 719, 983, 1007, 1189, 2119
MspR9I	CCNGG	6 cut(s)	633, 983, 1046, 1247, 1958, 2120
MunI	CAATTG	1 cut(s)	2068
Mva1269I	GAATGC	3 cut(s)	1360, 1429, 2003
MvaI	CCWGG	3 cut(s)	1046, 1247, 1958
NciI	CCSGG	3 cut(s)	633, 983, 2120
NdeII	GATC	4 cut(s)	50, 586, 1120, 1630
NheI	GCTAGC	1 cut(s)	1733
NlaIII	CATG	8 cut(s)	379, 568, 596, 740, 788, 1539, 1631, 2046
NlaIV	GGNNCC	5 cut(s)	47, 154, 717, 1202, 2124
NmuCI	GTSAC	2 cut(s)	1790, 2101
NsiI	ATGCAT	2 cut(s)	1360, 2003
NspV	TTCGAA	1 cut(s)	1037
PaeR7I	CTCGAG	1 cut(s)	1316
PciSI	GCTCTTC	1 cut(s)	1158
PcsI	WCGNNNNNNNCGW	1 cut(s)	46
PctI	GAATGC	3 cut(s)	1360, 1429, 2003
PdmI	GAANNNNTTC	2 cut(s)	255, 1863
PfeI	GAWTC	4 cut(s)	119, 164, 1087, 2140
PflMI	CCANNNNNTGG	2 cut(s)	1051, 1246
PfoI	TCCNGGA	1 cut(s)	631
PkrI	GCNGC	7 cut(s)	334, 531, 904, 1225, 1399, 1726, 1938
PleI	GAGTC	5 cut(s)	685, 1003, 1279, 1316, 1480
PpsI	GAGTC	5 cut(s)	685, 1003, 1279, 1316, 1480
Psp6I	CCWGG	3 cut(s)	1044, 1245, 1956
PspEI	GGTNACC	1 cut(s)	692
PspGI	CCWGG	3 cut(s)	1044, 1245, 1956
PspN4I	GGNNCC	5 cut(s)	47, 154, 717, 1202, 2124
PspOMI	GGGCCC	1 cut(s)	1200
PspPI	GGNCC	4 cut(s)	45, 1186, 1200, 1201
PstI	CTGCAG	1 cut(s)	1563
PstNI	CAGNNNCTG	1 cut(s)	1666
PvuII	CAGCTG	4 cut(s)	905, 1400, 1727, 1986
RsaI	GTAC	4 cut(s)	34, 284, 500, 610
RsaNI	GTAC	4 cut(s)	33, 283, 499, 609
RseI	CAYNNNNRTG	3 cut(s)	366, 380, 1797
SapI	GCTCTTC	1 cut(s)	1158
SaqAI	TTAA	9 cut(s)	339, 849, 932, 1056, 1182, 1257, 1361, 1481, 1554
SatI	GCNGC	7 cut(s)	333, 530, 903, 1224, 1398, 1725, 1937
Sau3AI	GATC	4 cut(s)	50, 586, 1120, 1630
Sau96I	GGNCC	4 cut(s)	45, 1186, 1200, 1201
ScaI	AGTACT	2 cut(s)	500, 610
SchI	GAGTC	5 cut(s)	686, 1004, 1279, 1316, 1481
ScrFI	CCNGG	6 cut(s)	633, 983, 1046, 1247, 1958, 2120
SduI	GDGCHC	6 cut(s)	191, 363, 468, 1204, 2050, 2125
SfaNI	GCATC	3 cut(s)	104, 319, 550
SfcI	CTRYAG	1 cut(s)	1559
Sfr274I	CTCGAG	1 cut(s)	1316
SfuI	TTCGAA	1 cut(s)	1037
SinI	GGWCC	1 cut(s)	1186
SlaI	CTCGAG	1 cut(s)	1316
SmiMI	CAYNNNNRTG	3 cut(s)	366, 380, 1797
SmlI	CTYRAG	6 cut(s)	481, 1169, 1316, 1412, 1751, 1814
SmoI	CTYRAG	6 cut(s)	481, 1169, 1316, 1412, 1751, 1814
SpeI	ACTAGT	1 cut(s)	668
SsiI	CCGC	1 cut(s)	509
SspI	AATATT	1 cut(s)	897
SspMI	CTAG	3 cut(s)	305, 669, 1734
StyD4I	CCNGG	6 cut(s)	631, 981, 1044, 1245, 1956, 2118
StyI	CCWWGG	1 cut(s)	1915
TaaI	ACNGT	2 cut(s)	13, 930
TaiI	ACGT	1 cut(s)	1714
TaqI	TCGA	9 cut(s)	69, 117, 185, 210, 601, 659, 913, 1037, 1317
TatI	WGTACW	3 cut(s)	282, 498, 608
TfiI	GAWTC	4 cut(s)	119, 164, 1087, 2140
Tru1I	TTAA	9 cut(s)	339, 849, 932, 1056, 1182, 1257, 1361, 1481, 1554
Tru9I	TTAA	9 cut(s)	339, 849, 932, 1056, 1182, 1257, 1361, 1481, 1554
TscAI	CASTG	6 cut(s)	16, 241, 368, 996, 1068, 1378
TseFI	GTSAC	2 cut(s)	1790, 2101
TseI	GCWGC	7 cut(s)	332, 529, 902, 1223, 1397, 1724, 1936
Tsp45I	GTSAC	2 cut(s)	1790, 2101
TspGWI	ACGGA	2 cut(s)	20, 2017
TspRI	CASTG	6 cut(s)	16, 241, 368, 996, 1068, 1378
Van91I	CCANNNNNTGG	2 cut(s)	1051, 1246
VpaK11BI	GGWCC	1 cut(s)	1186
XapI	RAATTY	7 cut(s)	255, 268, 275, 618, 1033, 1099, 1963
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1378
XhoI	CTCGAG	1 cut(s)	1316
XmiI	GTMKAC	1 cut(s)	1853
XmnI	GAANNNNTTC	2 cut(s)	255, 1863
XspI	CTAG	3 cut(s)	305, 669, 1734
ZrmI	AGTACT	2 cut(s)	500, 610
Zsp2I	ATGCAT	2 cut(s)	1360, 2003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.