FvH4_5g22520

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0009779
Physical Location & Seq
Reverse (-)
13846190 .. 13854182
7993 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g22520.t5

Sequence Viewer

Length: 3786 bp
ATGACTTCAAAGCCGGATACATTTCCCTCGTCCGGCAACGTCAACGACGACCACTCAGACGACGACGATATGTTGAAGTTGAAGAAGAAGAAGGCGAAACAAGAAGAAGATAAAGAGAACAGGAAGCGCAACGTTCCGTTACTCAAGCTCTTCTCTTTCGCTGATTCTTACGACTGCGTTTTGATGGCAATCGGGTCTGTCGGGGCATGTGTTCATGGCGCTTCAGTCCCTGTCTTCTTTATTTTCTTCGGAAAACTGATAAACATTATTGGCCTTGCTTATCTCTTTCCCAAAGAAGCTTCCTCTAAAGTAGCCAAGTACTCCTTGGATTTTGTATATCTCAGCATAGCTATATTGTTTTCATCATGGACCGAGGTGGCTTGTTGGATGCACACTGGGGAAAGACAAGCAGCGAAAATGAGGATGGCGTATTTGAGAGCCATGTTGAATCAAGATATAAGTCTTTTCGACACTGAAGCTTCTACTGGGGAAGTCATTTCTGCAATCACAAGTGACATTCTTGTGGTTCAAGATGCTCTTTCTGAGAAGGTAGGGAATTTCATGCACTACATAAGCAGATTTCTAGCAGGATTCATAATTGGGTTTGTTAGGGTTTGGCAAATTAGTCTGGTCACTCTCTCCATTGTTCCCCTAATTGCCCTTGCTGGTGGTGTCTATGCCTATGTCACTATTGGCCTCATTGCTAGGGTTAGGAAGTCCTATGTCAAGGCTGGTGAAATTGCTGAAGAGGTGATAGGAAATGTGAGGACAGTGCAAGCATTTGCAGCAGAAGAAAGGGCTGTAAGGCAGTACAAGACAGCTCTGATGGGTACATACAAGTATGGGAAGAAAGCAGGACTGGCCAAGGGTTTGGGGCTGGGCTCCCTGCATTGCACCCTTTTTCTTTCATGGGCATTGCTCGTTTGGTTCACTAGCATTGTTGTGCACAAGAATATCGCTAATGGTGGCGAGTCTTTCACCACCATGCTTAATGTTGTTATTGCTGGCCTGTCACTAGGGCAAGCAGCGCCTGACATCTCTGCTTTCATTCGAGCTAAGGCAGCTGCATATCCTATATTTGAGATGATAGAGAGGAACACAGTGAACCAATCTAGCAGCAAAACTGGTCGGAAGCTGGACAAACTTGAGGGGCATATCCAATTCAAGGATGTGTCTTTTAGCTACCCATCTCGTACAGATGTTAGTATCTTTGATAAGCTCAATCTTGATATCCCTGCCGGGAAGATTGTAGCTCTTGTAGGAGGAAGTGGTTCTGGCAAGAGTACAGTTATATCTTTGATTGAAAGATTCTATGAGCCACTTGCTGGCCAGGTATTGTTAGATGGAAATAATATAAGCGAACTTGACCTCAAATGGATGAGGCAACAAATTGGGCTGGTCAATCAGGAGCCTGCTCTTTTTGCAACAAGCATTAGGGAAAATATTCTCTACGGAAGAGGTGATGCTTCAATGGATGATATCAAGCAGGCAGCTAAACTCGCAGAGGCTCTTTCTTTCATCAATAACCTCCCGGAGAGATTTGAAACTCAGGTTGGTGAGAGAGGCATACAACTCTCAGGAGGACAAAAGCAAAGGATTGCAATAGCACGTGCAATAGTGAAGAATCCATCAATTCTTCTATTGGATGAAGCAACGAGTGCACTGGATGCAGAGTCTGAAAAGAGTGTGCAGGAGGCACTTGATCGTGCCATGGTAGGGCGAACAACAGTAGTGGTGGCACATCGTCTGTCCACTGTCAGGAATGCAGATGTTATTGCAGTTGTTCAAGAGGGGAAGATAGTTGAAACTGGGAGCCATGAGGAGCTAATTTCAAACCCCAATGGTGTCTATGCAGCACTTGTACATCTACAAGAGACAGCTTCTTTGCAACGCCACCCCTCATTTGGTCCTAACTTAGGACGGAGCATGAGGTATTCACGAGAGTTATCTCGCACTACAGCAAGTTTTGGTGCCAGCTTTCGATCTGATAAAGAATCTCTTGGGCGTCCTGGTGGTGAGGGAATAGAGATTAAGTCGAGACATGTATCAGCAAGTAAACTGTATTCCATGATCCGTCCAGACTGGCACTATGGGGTGATGGGCACCATTGGTGCCCTTATTGCTGGAGCTCAGATGCCTCTTTTCGCTCTTGGTGTCTCTCAGGCTCTAGTTTCCTATTACATGGACTGGGAAACAACATGCCGTGAAGTTAAGAAGATCTCATTACTCTTCTGTGGGGCTGCAGTGGTAACTGTCATTGTTCATGCTGTAGCTCATCTTTGTATGGGAACTATGGGAGAGCGACTCACTCTTCGAGTTAGAGAGAAGATGTTTTCTGCAATTTTGAGGAACGAGATCGGGTGGTTTGATGATACAAACAACACCAGTTCTATGCTTTCATCGCGTCTAGAAAGTGATGCAACTTTATTACGAACTATAGTTGTTGATCGCTCAACAATTCTTTTACAGAATGTGGGGTTGATAGTTGCCTCATTTATCATTGCCTTCATCTTGAACTGGAGAATCACATTAGTGGTCTTAGCCACATATCCTTTGATCATTAGTGGTCATATCAGCGAGAAACTTTTCATGAAAGGCTATGGTGGGAACTTGAGCACAGCATATCTGAAAGCTAACATGCTAGCAGGGGAAGCTGTAAGTAACATCCGCACTGTTGCTGCATTTTGTTCTGAGGAGAAAGTCATCGACCTGTATGGTCGTGAGCTTGTTGGACCTTCTAGACGTTCATTTACTCGTGGTCAGATTGCTGGCATATTCTATGGTGTATCTCAGTTCTTCATATTCTCATCTTATGGCCTGGCCTTGTGGTATGGATCTGTTTTGATGGAAAAGGGGCTTGCTAACTTCAAATCTGTCATGAAATCATTCTTTGTTTTGATTGTGACGGCATTAGCAATGGGTGAGACTTTAGCGCTTGCCCCTGATCTTTTAAAAGGGAACCAAATGGTGGCATCAGTCTTTGATGTCACAGATCGCAGAACAGAAATCCTAGGGGACATAGGAGAAGAGGTTACGAAAGTGGAGGGGACAATTGAGTTAAGGGGTGTTCAATTTAGCTATCCGTCAAGACCAGACGTATTGCTTTTCAGGGACTTCAATCTGAAAGTTCATTCAGGCAAGACTATGGCATTGGTGGGACAAAGTGGTTCTGGTAAAAGTTCTGTGATTTCTTTAATTCTCAGATTTTATGATCCGACAGCTGGGAAAGTTATGATAGATGGAAAAGACATCAAAAAAGTAAATCTCAAATCTCTACGAAGACACATTGGCCTGGTTCAACAAGAACCAGCTCTCTTTGCTACATCAATTTATGAAAACATCCTTTATGGAAAAGAAGGAGCTTCTGAAGCAGAAGTAATTGAAGCAGCCAAGCTTGCCAATGCACATAGTTTCATTAGTGCCCTTCCAGAGGGCTACTCCACTAAAGTTGGAGAGAGAGGGGTGCAACTATCCGGTGGCCAAAGGCAAAGGGTGGCCATTGCCAGAGCAGTTTTAAAGAACCCTGAAATTTTGTTACTAGATGAGGCGACTAGTGCTCTAGATTTGGAGTCTGAGCGTGTGGTGCAACAAGCTCTTGACAGATTGATGAAGACTCGTACAACAATAATGGTGGCACATAGGCTATCCACAATTCAAAATGCAGACGAAATATCTGTCATACAAGATGGGAAGATTGTGGAGCAAGGAAGTCATTCAACTCTTATAGAGAACAGAAATGGAGCATACTACAAGTTAATAAACATTCAGCAGCAACAGCAGCATTGA

Protein Analysis

1262

Amino Acids

138.18

Weight (kDa)

8.89

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 2 - 205 4.2e-39 ABC transporter transmembrane region
ABC_tran PF00005 276 - 424 1.6e-34 ABC transporter
ABC_membrane PF00664 571 - 841 7.4e-45 ABC transporter transmembrane region
ABC_tran PF00005 908 - 1056 1e-34 ABC transporter
SMC_N PF02463 945 - 1098 9e-06 RecF/RecN/SMC N terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0009779)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10680 AT1G10680 AT4G25960
fragaria_vesca FvH4_5g22520 FvH4_5g22520 FvH4_5g22520 FvH4_5g22520 FvH4_5g22520 FvH4_5g22520
malus_domestica MD06G1037400.v1.1
prunus_persica Prupe.5G031600_v2.0.a1
pyrus_communis pycom06g03090
rosa_chinensis RchiOBHm_Chr7g0210291
rosa_laevigata RLG00000003051 RLG00000029346
rosa_multiflora Rmu_sc0003639.1_g000002
rosa_roxburghii Rroxscaffold_3G00248450
rosa_rugosa Rorug07G0120500
rosa_samantha Rh7AG253400 Rh7CG270300
rosa_wichuraiana Rw7G021600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 1970, 2102, 2111
AccB7I CCANNNNNTGG 2 cut(s) 1325, 2968
AccII CGCG 1 cut(s) 2404
AciI CCGC 1 cut(s) 2668
AclI AACGTT 1 cut(s) 132
AclWI GGATC 3 cut(s) 2065, 2842, 3206
AcoI YGGCCR 4 cut(s) 861, 1327, 3478, 3495
AcsI RAATTY 2 cut(s) 556, 3528
AcuI CTGAAG 4 cut(s) 207, 495, 765, 3387
AcvI CACGTG 1 cut(s) 1610
AcyI GRCGYC 1 cut(s) 2005
AfaI GTAC 7 cut(s) 320, 812, 832, 1195, 1285, 1863, 3619
AfeI AGCGCT 1 cut(s) 2934
AflIII ACRYGT 1 cut(s) 2041
AhlI ACTAGT 1 cut(s) 3551
AjnI CCWGG 4 cut(s) 1329, 2008, 2817, 3291
AjuI GAANNNNNNNTTGG 2 cut(s) 1536, 1568
AleI CACNNNNGTG 1 cut(s) 2531
Alw21I GWGCWC 5 cut(s) 948, 1663, 2131, 2618, 3559
Alw26I GTCTC 4 cut(s) 1868, 2032, 2161, 2918
Alw44I GTGCAC 2 cut(s) 944, 1659
AlwI GGATC 3 cut(s) 2065, 2842, 3206
AlwNI CAGNNNCTG 3 cut(s) 230, 1031, 1676
Aor51HI AGCGCT 1 cut(s) 2934
ApaLI GTGCAC 2 cut(s) 944, 1659
ApoI RAATTY 2 cut(s) 556, 3528
ArsI GACNNNNNNTTYG 6 cut(s) 1867, 1899, 2295, 2327, 3660, 3692
Asp700I GAANNNNTTC 5 cut(s) 1270, 1443, 2585, 2885, 3712
AspA2I CCTAGG 1 cut(s) 3010
AspLEI GCGC 4 cut(s) 129, 221, 1030, 2935
AspS9I GGNCC 3 cut(s) 369, 1907, 2732
AsuC2I CCSGG 2 cut(s) 1240, 1532
AsuHPI GGTGA 8 cut(s) 746, 763, 970, 1472, 1568, 2027, 2107, 2933
AsuNHI GCTAGC 1 cut(s) 2641
AvaII GGWCC 3 cut(s) 369, 1907, 2732
AvrII CCTAGG 1 cut(s) 3010
BaeGI GKGCMC 5 cut(s) 948, 1663, 2105, 2116, 3424
BalI TGGCCA 4 cut(s) 863, 1329, 3480, 3497
BanI GGYRCC 3 cut(s) 1970, 2102, 2111
BanII GRGCYC 2 cut(s) 884, 2131
BauI CACGAG 2 cut(s) 1938, 2754
BbrPI CACGTG 1 cut(s) 1610
BbsI GAAGAC 3 cut(s) 226, 3286, 3617
Bbv12I GWGCWC 5 cut(s) 948, 1663, 2131, 2618, 3559
BceAI ACGGC 2 cut(s) 2187, 2922
BciT130I CCWGG 4 cut(s) 1331, 2010, 2819, 3293
BciVI GTATCC 1 cut(s) 10
BclI TGATCA 1 cut(s) 2556
BcnI CCSGG 2 cut(s) 1240, 1532
BcoDI GTCTC 4 cut(s) 1868, 2032, 2161, 2918
BcuI ACTAGT 1 cut(s) 3551
BfmI CTRYAG 4 cut(s) 1956, 2241, 2268, 2436
BfoI RGCGCY 3 cut(s) 222, 1031, 2936
BfuI GTATCC 1 cut(s) 10
BglII AGATCT 1 cut(s) 2217
BlnI CCTAGG 1 cut(s) 3010
BmcAI AGTACT 1 cut(s) 320
Bme1390I CCNGG 6 cut(s) 1240, 1331, 1532, 2010, 2819, 3293
Bme18I GGWCC 3 cut(s) 369, 1907, 2732
BmgT120I GGNCC 3 cut(s) 369, 1907, 2732
BmiI GGNNCC 7 cut(s) 883, 1410, 1814, 1972, 2104, 2113, 2960
BmrFI CCNGG 6 cut(s) 1240, 1331, 1532, 2010, 2819, 3293
BmrI ACTGGG 4 cut(s) 405, 495, 1818, 2197
BmsI GCATC 7 cut(s) 378, 523, 1453, 1657, 2124, 2407, 2981
BmtI GCTAGC 1 cut(s) 2645
BmuI ACTGGG 4 cut(s) 405, 495, 1818, 2197
BpiI GAAGAC 3 cut(s) 226, 3286, 3617
BplI GAGNNNNNCTC 4 cut(s) 2289, 2321, 3422, 3454
BpmI CTGGAG 2 cut(s) 2145, 2539
Bpu10I CCTNAGC 1 cut(s) 1056
BpuEI CTTGAG 3 cut(s) 128, 1166, 2632
BpuMI CCSGG 2 cut(s) 1240, 1532
BsaAI YACGTR 1 cut(s) 1610
BsaBI GATNNNNATC 1 cut(s) 188
BsaHI GRCGYC 1 cut(s) 2005
BsaJI CCNNGG 5 cut(s) 324, 372, 864, 1710, 3010
BsaWI WCCGGW 1 cut(s) 3473
BsaXI ACNNNNNCTCC 2 cut(s) 3015, 3045
Bse3DI GCAATG 6 cut(s) 699, 889, 914, 2499, 2922, 3498
Bse8I GATNNNNATC 1 cut(s) 188
BseBI CCWGG 4 cut(s) 1331, 2010, 2819, 3293
BseDI CCNNGG 5 cut(s) 324, 372, 864, 1710, 3010
BseGI GGATG 9 cut(s) 393, 429, 1174, 1383, 1480, 1651, 1672, 2664, 3339
BseJI GATNNNNATC 1 cut(s) 188
BseMI GCAATG 6 cut(s) 699, 889, 914, 2499, 2922, 3498
BseRI GAGGAG 2 cut(s) 1835, 2708
BseSI GKGCMC 5 cut(s) 948, 1663, 2105, 2116, 3424
BseYI CCCAGC 2 cut(s) 877, 3221
BsgI GTGCAG 1 cut(s) 1709
Bsh1236I CGCG 1 cut(s) 2404
BshNI GGYRCC 3 cut(s) 1970, 2102, 2111
BsiHKAI GWGCWC 5 cut(s) 948, 1663, 2131, 2618, 3559
BsiSI CCGG 5 cut(s) 14, 33, 1239, 1532, 3474
BslFI GGGAC 5 cut(s) 212, 3029, 3061, 3125, 3171
BsmAI GTCTC 4 cut(s) 1868, 2032, 2161, 2918
BsmFI GGGAC 5 cut(s) 212, 3029, 3061, 3125, 3171
BsmI GAATGC 1 cut(s) 1768
Bsp1286I GDGCHC 9 cut(s) 884, 948, 1663, 2105, 2116, 2131, 2618, 3424, 3559
Bsp1407I TGTACA 1 cut(s) 1861
Bsp19I CCATGG 1 cut(s) 1710
BspACI CCGC 1 cut(s) 2668
BspFNI CGCG 1 cut(s) 2404
BspHI TCATGA 2 cut(s) 2589, 2877
BspLI GGNNCC 7 cut(s) 883, 1410, 1814, 1972, 2104, 2113, 2960
BspMAI CTGCAG 1 cut(s) 2245
BspOI GCTAGC 1 cut(s) 2645
BspPI GGATC 3 cut(s) 2065, 2842, 3206
BspQI GCTCTTC 1 cut(s) 155
BspT107I GGYRCC 3 cut(s) 1970, 2102, 2111
BsrDI GCAATG 6 cut(s) 699, 889, 914, 2499, 2922, 3498
BsrGI TGTACA 1 cut(s) 1861
BssECI CCNNGG 5 cut(s) 324, 372, 864, 1710, 3010
BssNI GRCGYC 1 cut(s) 2005
BssSI CACGAG 2 cut(s) 1938, 2754
BssT1I CCWWGG 4 cut(s) 324, 864, 1710, 3010
Bst2BI CACGAG 2 cut(s) 1938, 2754
Bst2UI CCWGG 4 cut(s) 1331, 2010, 2819, 3293
Bst4CI ACNGT 8 cut(s) 772, 1102, 1288, 1729, 1756, 2061, 2254, 2674
Bst6I CTCTTC 6 cut(s) 155, 741, 1450, 2234, 2316, 3021
BstACI GRCGYC 1 cut(s) 2005
BstAPI GCANNNNNTGC 2 cut(s) 1658, 1667
BstAUI TGTACA 1 cut(s) 1861
BstBAI YACGTR 1 cut(s) 1610
BstDSI CCRYGG 1 cut(s) 1710
BstENI CCTNNNNNAGG 2 cut(s) 1914, 3428
BstF5I GGATG 9 cut(s) 393, 429, 1174, 1383, 1480, 1651, 1672, 2664, 3339
BstFNI CGCG 1 cut(s) 2404
BstH2I RGCGCY 3 cut(s) 222, 1031, 2936
BstHHI GCGC 4 cut(s) 129, 221, 1030, 2935
BstMAI GTCTC 4 cut(s) 1868, 2032, 2161, 2918
BstNI CCWGG 4 cut(s) 1331, 2010, 2819, 3293
BstNSI RCATGY 4 cut(s) 210, 2045, 2202, 2641
BstSCI CCNGG 6 cut(s) 1238, 1329, 1530, 2008, 2817, 3291
BstSFI CTRYAG 4 cut(s) 1956, 2241, 2268, 2436
BstSLI GKGCMC 5 cut(s) 948, 1663, 2105, 2116, 3424
BstUI CGCG 1 cut(s) 2404
BstV2I GAAGAC 3 cut(s) 226, 3286, 3617
BstX2I RGATCY 2 cut(s) 2217, 2834
BstXI CCANNNNNNTGG 1 cut(s) 871
BstYI RGATCY 2 cut(s) 2217, 2834
BsuI GTATCC 1 cut(s) 10
BtgI CCRYGG 1 cut(s) 1710
BtgZI GCGATG 1 cut(s) 2385
BtsCI GGATG 9 cut(s) 393, 429, 1174, 1383, 1480, 1651, 1672, 2664, 3339
BtsI GCAGTG 1 cut(s) 2250
BtsIMutI CAGTG 8 cut(s) 393, 471, 777, 1107, 1661, 1752, 2250, 2670
CaiI CAGNNNCTG 3 cut(s) 230, 1031, 1676
CciI TCATGA 2 cut(s) 2589, 2877
CfoI GCGC 4 cut(s) 129, 221, 1030, 2935
Cfr13I GGNCC 3 cut(s) 369, 1907, 2732
CseI GACGC 2 cut(s) 1994, 2393
Csp6I GTAC 7 cut(s) 319, 811, 831, 1194, 1284, 1862, 3618
CspCI CAANNNNNGTGG 6 cut(s) 1713, 1748, 3430, 3465, 3612, 3647
CviQI GTAC 7 cut(s) 319, 811, 831, 1194, 1284, 1862, 3618
DraI TTTAAA 2 cut(s) 2952, 3516
EaeI YGGCCR 4 cut(s) 861, 1327, 3478, 3495
Eam1104I CTCTTC 6 cut(s) 155, 741, 1450, 2234, 2316, 3021
EarI CTCTTC 6 cut(s) 155, 741, 1450, 2234, 2316, 3021
Ecl136II GAGCTC 1 cut(s) 2129
Eco130I CCWWGG 4 cut(s) 324, 864, 1710, 3010
Eco24I GRGCYC 2 cut(s) 884, 2131
Eco32I GATATC 2 cut(s) 1231, 1480
Eco47I GGWCC 3 cut(s) 369, 1907, 2732
Eco47III AGCGCT 1 cut(s) 2934
Eco53kI GAGCTC 1 cut(s) 2129
Eco57I CTGAAG 4 cut(s) 207, 495, 765, 3387
Eco72I CACGTG 1 cut(s) 1610
EcoICRI GAGCTC 1 cut(s) 2129
EcoNI CCTNNNNNAGG 2 cut(s) 1914, 3428
EcoRII CCWGG 4 cut(s) 1329, 2008, 2817, 3291
EcoRV GATATC 2 cut(s) 1231, 1480
EcoT14I CCWWGG 4 cut(s) 324, 864, 1710, 3010
EcoT38I GRGCYC 2 cut(s) 884, 2131
ErhI CCWWGG 4 cut(s) 324, 864, 1710, 3010
FalI AAGNNNNNCTT 6 cut(s) 308, 340, 522, 554, 1983, 2015
FaqI GGGAC 5 cut(s) 212, 3029, 3061, 3125, 3171
FbaI TGATCA 1 cut(s) 2556
FokI GGATG 9 cut(s) 400, 436, 1181, 1390, 1487, 1658, 1679, 2651, 3326
FriOI GRGCYC 2 cut(s) 884, 2131
GlaI GCGC 4 cut(s) 128, 220, 1029, 2934
GsaI CCCAGC 2 cut(s) 881, 3225
GsuI CTGGAG 2 cut(s) 2145, 2539
HaeII RGCGCY 3 cut(s) 222, 1031, 2936
HapII CCGG 5 cut(s) 14, 33, 1239, 1532, 3474
HgaI GACGC 2 cut(s) 1994, 2393
HhaI GCGC 4 cut(s) 129, 221, 1030, 2935
Hin1I GRCGYC 1 cut(s) 2005
Hin6I GCGC 4 cut(s) 127, 219, 1028, 2933
HinP1I GCGC 4 cut(s) 127, 219, 1028, 2933
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HindIII AAGCTT 3 cut(s) 297, 477, 3392
HpaII CCGG 5 cut(s) 14, 33, 1239, 1532, 3474
HphI GGTGA 8 cut(s) 746, 763, 970, 1472, 1568, 2027, 2107, 2933
Hpy166II GTNNAC 7 cut(s) 43, 930, 946, 1105, 1661, 1752, 2057
Hpy8I GTNNAC 7 cut(s) 43, 930, 946, 1105, 1661, 1752, 2057
Hpy99I CGWCG 3 cut(s) 50, 65, 68
HpyAV CCTTC 6 cut(s) 85, 541, 2515, 2745, 3350, 3434
HpyCH4III ACNGT 8 cut(s) 772, 1102, 1288, 1729, 1756, 2061, 2254, 2674
HpyCH4IV ACGT 5 cut(s) 39, 132, 1609, 2743, 3096
HpySE526I ACGT 5 cut(s) 39, 132, 1609, 2743, 3096
Hsp92I GRCGYC 1 cut(s) 2005
HspAI GCGC 4 cut(s) 127, 219, 1028, 2933
Ksp22I TGATCA 1 cut(s) 2556
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 9 cut(s) 887, 1408, 1812, 1822, 1923, 2126, 3359, 3700, 3740
LweI GCATC 7 cut(s) 378, 523, 1453, 1657, 2124, 2407, 2981
MaeII ACGT 5 cut(s) 39, 132, 1609, 2743, 3096
MfeI CAATTG 1 cut(s) 3051
MflI RGATCY 2 cut(s) 2217, 2834
MhlI GDGCHC 9 cut(s) 884, 948, 1663, 2105, 2116, 2131, 2618, 3424, 3559
MlsI TGGCCA 4 cut(s) 863, 1329, 3480, 3497
MluNI TGGCCA 4 cut(s) 863, 1329, 3480, 3497
MlyI GAGTC 5 cut(s) 980, 1682, 2298, 3578, 3607
MmeI TCCRAC 5 cut(s) 365, 1109, 2710, 3239, 3430
Mox20I TGGCCA 4 cut(s) 863, 1329, 3480, 3497
MroXI GAANNNNTTC 5 cut(s) 1270, 1443, 2585, 2885, 3712
MscI TGGCCA 4 cut(s) 863, 1329, 3480, 3497
MseI TTAA 8 cut(s) 990, 2031, 2211, 2951, 3059, 3194, 3515, 3755
MslI CAYNNNNRTG 4 cut(s) 521, 941, 983, 2531
Msp20I TGGCCA 4 cut(s) 863, 1329, 3480, 3497
MspA1I CMGCKG 2 cut(s) 1064, 3221
MspI CCGG 5 cut(s) 14, 33, 1239, 1532, 3474
MspR9I CCNGG 6 cut(s) 1240, 1331, 1532, 2010, 2819, 3293
MunI CAATTG 1 cut(s) 3051
Mva1269I GAATGC 1 cut(s) 1768
MvaI CCWGG 4 cut(s) 1331, 2010, 2819, 3293
MvnI CGCG 1 cut(s) 2404
NciI CCSGG 2 cut(s) 1240, 1532
NcoI CCATGG 1 cut(s) 1710
NheI GCTAGC 1 cut(s) 2641
NlaIV GGNNCC 7 cut(s) 883, 1410, 1814, 1972, 2104, 2113, 2960
NmuCI GTSAC 6 cut(s) 512, 631, 685, 1011, 2902, 2986
NspI RCATGY 4 cut(s) 210, 2045, 2202, 2641
OliI CACNNNNGTG 1 cut(s) 2531
PagI TCATGA 2 cut(s) 2589, 2877
PciI ACATGT 1 cut(s) 2041
PciSI GCTCTTC 1 cut(s) 155
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PctI GAATGC 1 cut(s) 1768
PdmI GAANNNNTTC 5 cut(s) 1270, 1443, 2585, 2885, 3712
PfeI GAWTC 7 cut(s) 164, 448, 591, 1308, 1624, 1994, 2523
PflMI CCANNNNNTGG 2 cut(s) 1325, 2968
PfoI TCCNGGA 1 cut(s) 1530
PleI GAGTC 5 cut(s) 979, 1681, 2298, 3577, 3607
PmaCI CACGTG 1 cut(s) 1610
PmlI CACGTG 1 cut(s) 1610
PpsI GAGTC 5 cut(s) 979, 1681, 2298, 3577, 3607
Ppu21I YACGTR 1 cut(s) 1610
PscI ACATGT 1 cut(s) 2041
Psp124BI GAGCTC 1 cut(s) 2131
Psp1406I AACGTT 1 cut(s) 132
Psp6I CCWGG 4 cut(s) 1329, 2008, 2817, 3291
PspCI CACGTG 1 cut(s) 1610
PspFI CCCAGC 2 cut(s) 877, 3221
PspGI CCWGG 4 cut(s) 1329, 2008, 2817, 3291
PspN4I GGNNCC 7 cut(s) 883, 1410, 1814, 1972, 2104, 2113, 2960
PspPI GGNCC 3 cut(s) 369, 1907, 2732
PstI CTGCAG 1 cut(s) 2245
PstNI CAGNNNCTG 3 cut(s) 230, 1031, 1676
PsuI RGATCY 2 cut(s) 2217, 2834
PvuII CAGCTG 2 cut(s) 1064, 3221
RsaI GTAC 7 cut(s) 320, 812, 832, 1195, 1285, 1863, 3619
RsaNI GTAC 7 cut(s) 319, 811, 831, 1194, 1284, 1862, 3618
RseI CAYNNNNRTG 4 cut(s) 521, 941, 983, 2531
SacI GAGCTC 1 cut(s) 2131
SapI GCTCTTC 1 cut(s) 155
SaqAI TTAA 8 cut(s) 990, 2031, 2211, 2951, 3059, 3194, 3515, 3755
Sau96I GGNCC 3 cut(s) 369, 1907, 2732
ScaI AGTACT 1 cut(s) 320
SchI GAGTC 5 cut(s) 980, 1682, 2298, 3578, 3607
ScrFI CCNGG 6 cut(s) 1240, 1331, 1532, 2010, 2819, 3293
SduI GDGCHC 9 cut(s) 884, 948, 1663, 2105, 2116, 2131, 2618, 3424, 3559
SfaNI GCATC 7 cut(s) 378, 523, 1453, 1657, 2124, 2407, 2981
SfcI CTRYAG 4 cut(s) 1956, 2241, 2268, 2436
SinI GGWCC 3 cut(s) 369, 1907, 2732
SmiMI CAYNNNNRTG 4 cut(s) 521, 941, 983, 2531
SmlI CTYRAG 3 cut(s) 143, 1145, 2611
SmoI CTYRAG 3 cut(s) 143, 1145, 2611
SpeI ACTAGT 1 cut(s) 3551
SsiI CCGC 1 cut(s) 2668
SspI AATATT 1 cut(s) 1444
SstI GAGCTC 1 cut(s) 2131
StyD4I CCNGG 6 cut(s) 1238, 1329, 1530, 2008, 2817, 3291
StyI CCWWGG 4 cut(s) 324, 864, 1710, 3010
TaaI ACNGT 8 cut(s) 772, 1102, 1288, 1729, 1756, 2061, 2254, 2674
TaiI ACGT 5 cut(s) 42, 135, 1612, 2746, 3099
TaqI TCGA 6 cut(s) 468, 1051, 1981, 2036, 2314, 2706
TaqII GACCGA 1 cut(s) 386
TatI WGTACW 4 cut(s) 318, 810, 1283, 1861
TfiI GAWTC 7 cut(s) 164, 448, 591, 1308, 1624, 1994, 2523
Tru1I TTAA 8 cut(s) 990, 2031, 2211, 2951, 3059, 3194, 3515, 3755
Tru9I TTAA 8 cut(s) 990, 2031, 2211, 2951, 3059, 3194, 3515, 3755
TscAI CASTG 8 cut(s) 400, 478, 777, 1107, 1668, 1759, 2250, 2677
TseFI GTSAC 6 cut(s) 512, 631, 685, 1011, 2902, 2986
Tsp45I GTSAC 6 cut(s) 512, 631, 685, 1011, 2902, 2986
TspGWI ACGGA 5 cut(s) 126, 1467, 1936, 2063, 3072
TspRI CASTG 8 cut(s) 400, 478, 777, 1107, 1668, 1759, 2250, 2677
Van91I CCANNNNNTGG 2 cut(s) 1325, 2968
VneI GTGCAC 2 cut(s) 944, 1659
VpaK11BI GGWCC 3 cut(s) 369, 1907, 2732
XagI CCTNNNNNAGG 2 cut(s) 1914, 3428
XapI RAATTY 2 cut(s) 556, 3528
XbaI TCTAGA 3 cut(s) 2407, 2738, 3559
XceI RCATGY 4 cut(s) 210, 2045, 2202, 2641
XcmI CCANNNNNNNNNTGG 2 cut(s) 322, 1901
XmaJI CCTAGG 1 cut(s) 3010
XmnI GAANNNNTTC 5 cut(s) 1270, 1443, 2585, 2885, 3712
ZrmI AGTACT 1 cut(s) 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.