mRNA-capping
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g25120 |
| rosa_chinensis | RchiOBHm_Chr7g0215321 |
| rosa_laevigata | RLG00000002670 |
| rosa_multiflora | Rmu_co8409009.1_g000001 Rmu_sc0021837.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00244280 |
| rosa_rugosa | Rorug07G0152100 |
| rosa_samantha | Rh7AG288900 Rh7BG280900 Rh7CG308700 Rh7DG292500 |
| rosa_wichuraiana | Rw7G024700 Rw7G028500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 692 |
| Acc65I | GGTACC | 1 cut(s) | 553 |
| AccB1I | GGYRCC | 1 cut(s) | 553 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 314 |
| AccBSI | CCGCTC | 1 cut(s) | 1396 |
| AciI | CCGC | 4 cut(s) | 224, 827, 988, 1396 |
| AclWI | GGATC | 1 cut(s) | 1607 |
| AcoI | YGGCCR | 1 cut(s) | 1705 |
| AcsI | RAATTY | 5 cut(s) | 240, 253, 1040, 1184, 1556 |
| AcuI | CTGAAG | 2 cut(s) | 738, 1571 |
| AdeI | CACNNNGTG | 1 cut(s) | 359 |
| AfaI | GTAC | 7 cut(s) | 555, 614, 643, 1139, 1252, 1258, 1377 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 294, 314, 539 |
| AflIII | ACRYGT | 2 cut(s) | 328, 1269 |
| AgsI | TTSAA | 7 cut(s) | 34, 245, 406, 502, 604, 898, 1189 |
| AhlI | ACTAGT | 1 cut(s) | 1253 |
| AjnI | CCWGG | 5 cut(s) | 260, 289, 385, 1045, 1306 |
| Alw26I | GTCTC | 3 cut(s) | 175, 896, 1826 |
| AlwI | GGATC | 1 cut(s) | 1607 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 716 |
| Ama87I | CYCGRG | 1 cut(s) | 1821 |
| AoxI | GGCC | 2 cut(s) | 1639, 1705 |
| ApeKI | GCWGC | 8 cut(s) | 80, 107, 283, 999, 1081, 1084, 1441, 1580 |
| ApoI | RAATTY | 5 cut(s) | 240, 253, 1040, 1184, 1556 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 861, 1556, 1560, 1641 |
| Asp718I | GGTACC | 1 cut(s) | 553 |
| AspLEI | GCGC | 1 cut(s) | 693 |
| AsuC2I | CCSGG | 1 cut(s) | 753 |
| AsuHPI | GGTGA | 8 cut(s) | 371, 466, 583, 965, 1253, 1303, 1516, 1712 |
| AvaI | CYCGRG | 1 cut(s) | 1821 |
| BalI | TGGCCA | 1 cut(s) | 1707 |
| BanI | GGYRCC | 1 cut(s) | 553 |
| BauI | CACGAG | 1 cut(s) | 1391 |
| BbsI | GAAGAC | 1 cut(s) | 66 |
| BbvI | GCAGC | 8 cut(s) | 67, 119, 270, 986, 1068, 1096, 1453, 1567 |
| BccI | CCATC | 8 cut(s) | 4, 316, 1121, 1274, 1282, 1580, 1697, 1772 |
| BciT130I | CCWGG | 5 cut(s) | 262, 291, 387, 1047, 1308 |
| BciVI | GTATCC | 1 cut(s) | 913 |
| BclI | TGATCA | 3 cut(s) | 202, 672, 883 |
| BcnI | CCSGG | 1 cut(s) | 753 |
| BcoDI | GTCTC | 3 cut(s) | 175, 896, 1826 |
| BcuI | ACTAGT | 1 cut(s) | 1253 |
| BfaI | CTAG | 7 cut(s) | 116, 356, 446, 1023, 1254, 1277, 1860 |
| BfmI | CTRYAG | 6 cut(s) | 84, 105, 813, 1082, 1477, 1581 |
| BfuI | GTATCC | 1 cut(s) | 913 |
| BglII | AGATCT | 1 cut(s) | 848 |
| BisI | GCNGC | 9 cut(s) | 81, 108, 284, 989, 1000, 1082, 1085, 1442, 1581 |
| BlsI | GCNGC | 9 cut(s) | 82, 109, 285, 990, 1001, 1083, 1086, 1443, 1582 |
| BmcAI | AGTACT | 2 cut(s) | 1252, 1258 |
| Bme1390I | CCNGG | 6 cut(s) | 262, 291, 387, 753, 1047, 1308 |
| BmeT110I | CYCGRG | 1 cut(s) | 1821 |
| BmiI | GGNNCC | 4 cut(s) | 555, 864, 1494, 1878 |
| BmrFI | CCNGG | 6 cut(s) | 262, 291, 387, 753, 1047, 1308 |
| BmsI | GCATC | 3 cut(s) | 769, 800, 975 |
| BpiI | GAAGAC | 1 cut(s) | 66 |
| Bpu10I | CCTNAGC | 1 cut(s) | 738 |
| BpuMI | CCSGG | 1 cut(s) | 753 |
| Bsa29I | ATCGAT | 2 cut(s) | 212, 1296 |
| BsaBI | GATNNNNATC | 2 cut(s) | 885, 1292 |
| BsaJI | CCNNGG | 6 cut(s) | 289, 290, 1045, 1046, 1430, 1565 |
| BsaWI | WCCGGW | 1 cut(s) | 556 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 294, 314, 539 |
| Bse1I | ACTGG | 2 cut(s) | 701, 1058 |
| Bse3DI | GCAATG | 2 cut(s) | 679, 1671 |
| Bse8I | GATNNNNATC | 2 cut(s) | 885, 1292 |
| BseBI | CCWGG | 5 cut(s) | 262, 291, 387, 1047, 1308 |
| BseCI | ATCGAT | 2 cut(s) | 212, 1296 |
| BseDI | CCNNGG | 6 cut(s) | 289, 290, 1045, 1046, 1430, 1565 |
| BseGI | GGATG | 2 cut(s) | 791, 1054 |
| BseJI | GATNNNNATC | 2 cut(s) | 885, 1292 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 294, 314, 539 |
| BseMI | GCAATG | 2 cut(s) | 679, 1671 |
| BseMII | CTCAG | 4 cut(s) | 828, 1233, 1293, 1821 |
| BseNI | ACTGG | 2 cut(s) | 701, 1058 |
| BseRI | GAGGAG | 2 cut(s) | 995, 1522 |
| BseXI | GCAGC | 8 cut(s) | 67, 119, 270, 986, 1068, 1096, 1453, 1567 |
| BshFI | GGCC | 2 cut(s) | 1641, 1707 |
| BshNI | GGYRCC | 1 cut(s) | 553 |
| BshVI | ATCGAT | 2 cut(s) | 212, 1296 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1821 |
| BsiSI | CCGG | 2 cut(s) | 557, 752 |
| BslFI | GGGAC | 2 cut(s) | 1144, 1622 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 294, 314, 539 |
| BsmAI | GTCTC | 3 cut(s) | 175, 896, 1826 |
| BsmFI | GGGAC | 2 cut(s) | 1144, 1622 |
| BsnI | GGCC | 2 cut(s) | 1641, 1707 |
| BsoBI | CYCGRG | 1 cut(s) | 1821 |
| Bsp1407I | TGTACA | 1 cut(s) | 641 |
| Bsp143I | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| BspACI | CCGC | 4 cut(s) | 224, 827, 988, 1396 |
| BspANI | GGCC | 2 cut(s) | 1641, 1707 |
| BspCNI | CTCAG | 4 cut(s) | 829, 1234, 1294, 1822 |
| BspDI | ATCGAT | 2 cut(s) | 212, 1296 |
| BspHI | TCATGA | 2 cut(s) | 333, 799 |
| BspLI | GGNNCC | 4 cut(s) | 555, 864, 1494, 1878 |
| BspMAI | CTGCAG | 4 cut(s) | 109, 817, 1086, 1585 |
| BspPI | GGATC | 1 cut(s) | 1607 |
| BspT107I | GGYRCC | 1 cut(s) | 553 |
| BsrBI | CCGCTC | 1 cut(s) | 1396 |
| BsrDI | GCAATG | 2 cut(s) | 679, 1671 |
| BsrGI | TGTACA | 1 cut(s) | 641 |
| BsrI | ACTGG | 2 cut(s) | 701, 1058 |
| BssECI | CCNNGG | 6 cut(s) | 289, 290, 1045, 1046, 1430, 1565 |
| BssMI | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| BssSI | CACGAG | 1 cut(s) | 1391 |
| BssT1I | CCWWGG | 1 cut(s) | 1565 |
| Bst2BI | CACGAG | 1 cut(s) | 1391 |
| Bst2UI | CCWGG | 5 cut(s) | 262, 291, 387, 1047, 1308 |
| Bst4CI | ACNGT | 6 cut(s) | 45, 712, 1137, 1380, 1504, 1537 |
| Bst6I | CTCTTC | 3 cut(s) | 839, 1192, 1241 |
| BstAUI | TGTACA | 1 cut(s) | 641 |
| BstC8I | GCNNGC | 6 cut(s) | 695, 745, 813, 827, 1223, 1709 |
| BstDEI | CTNAG | 8 cut(s) | 279, 738, 837, 1067, 1155, 1242, 1302, 1830 |
| BstF5I | GGATG | 2 cut(s) | 791, 1054 |
| BstHHI | GCGC | 1 cut(s) | 693 |
| BstKTI | GATC | 8 cut(s) | 205, 675, 851, 886, 1296, 1596, 1615, 1968 |
| BstMAI | GTCTC | 3 cut(s) | 175, 896, 1826 |
| BstMBI | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 690, 703, 788, 1093 |
| BstNI | CCWGG | 5 cut(s) | 262, 291, 387, 1047, 1308 |
| BstNSI | RCATGY | 3 cut(s) | 332, 524, 1580 |
| BstSCI | CCNGG | 6 cut(s) | 260, 289, 385, 751, 1045, 1306 |
| BstSFI | CTRYAG | 6 cut(s) | 84, 105, 813, 1082, 1477, 1581 |
| BstV1I | GCAGC | 8 cut(s) | 67, 119, 270, 986, 1068, 1096, 1453, 1567 |
| BstV2I | GAAGAC | 1 cut(s) | 66 |
| BstX2I | RGATCY | 1 cut(s) | 848 |
| BstYI | RGATCY | 1 cut(s) | 848 |
| Bsu15I | ATCGAT | 2 cut(s) | 212, 1296 |
| BsuI | GTATCC | 1 cut(s) | 913 |
| BsuRI | GGCC | 2 cut(s) | 1641, 1707 |
| BsuTUI | ATCGAT | 2 cut(s) | 212, 1296 |
| BtsCI | GGATG | 2 cut(s) | 791, 1054 |
| BtsIMutI | CAGTG | 2 cut(s) | 708, 714 |
| Cac8I | GCNNGC | 6 cut(s) | 695, 745, 813, 827, 1223, 1709 |
| CaiI | CAGNNNCTG | 1 cut(s) | 716 |
| CciI | TCATGA | 2 cut(s) | 333, 799 |
| CfoI | GCGC | 1 cut(s) | 693 |
| ClaI | ATCGAT | 2 cut(s) | 212, 1296 |
| Csp6I | GTAC | 7 cut(s) | 554, 613, 642, 1138, 1251, 1257, 1376 |
| CviQI | GTAC | 7 cut(s) | 554, 613, 642, 1138, 1251, 1257, 1376 |
| DdeI | CTNAG | 8 cut(s) | 279, 738, 837, 1067, 1155, 1242, 1302, 1830 |
| DpnI | GATC | 8 cut(s) | 204, 674, 850, 885, 1295, 1595, 1614, 1967 |
| DpnII | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| DraI | TTTAAA | 1 cut(s) | 1774 |
| DraIII | CACNNNGTG | 1 cut(s) | 359 |
| EaeI | YGGCCR | 1 cut(s) | 1705 |
| Eam1104I | CTCTTC | 3 cut(s) | 839, 1192, 1241 |
| EarI | CTCTTC | 3 cut(s) | 839, 1192, 1241 |
| Eco130I | CCWWGG | 1 cut(s) | 1565 |
| Eco147I | AGGCCT | 1 cut(s) | 1641 |
| Eco32I | GATATC | 3 cut(s) | 216, 946, 1888 |
| Eco57I | CTGAAG | 2 cut(s) | 738, 1571 |
| Eco88I | CYCGRG | 1 cut(s) | 1821 |
| EcoRI | GAATTC | 1 cut(s) | 1556 |
| EcoRII | CCWGG | 5 cut(s) | 260, 289, 385, 1045, 1306 |
| EcoRV | GATATC | 3 cut(s) | 216, 946, 1888 |
| EcoT14I | CCWWGG | 1 cut(s) | 1565 |
| ErhI | CCWWGG | 1 cut(s) | 1565 |
| FaqI | GGGAC | 2 cut(s) | 1144, 1622 |
| FauI | CCCGC | 1 cut(s) | 834 |
| FauNDI | CATATG | 1 cut(s) | 1618 |
| FbaI | TGATCA | 3 cut(s) | 202, 672, 883 |
| Fnu4HI | GCNGC | 9 cut(s) | 81, 108, 284, 989, 1000, 1082, 1085, 1442, 1581 |
| FokI | GGATG | 2 cut(s) | 778, 1041 |
| Fsp4HI | GCNGC | 9 cut(s) | 81, 108, 284, 989, 1000, 1082, 1085, 1442, 1581 |
| FspAI | RTGCGCAY | 1 cut(s) | 692 |
| FspBI | CTAG | 7 cut(s) | 116, 356, 446, 1023, 1254, 1277, 1860 |
| FspI | TGCGCA | 1 cut(s) | 692 |
| GlaI | GCGC | 1 cut(s) | 692 |
| GluI | GCNGC | 9 cut(s) | 81, 108, 284, 989, 1000, 1082, 1085, 1442, 1581 |
| HaeIII | GGCC | 2 cut(s) | 1641, 1707 |
| HapII | CCGG | 2 cut(s) | 557, 752 |
| HhaI | GCGC | 1 cut(s) | 693 |
| Hin6I | GCGC | 1 cut(s) | 691 |
| HinP1I | GCGC | 1 cut(s) | 691 |
| HinfI | GANTC | 6 cut(s) | 362, 529, 548, 600, 904, 1787 |
| HpaII | CCGG | 2 cut(s) | 557, 752 |
| HphI | GGTGA | 8 cut(s) | 371, 466, 583, 965, 1253, 1303, 1516, 1712 |
| Hpy166II | GTNNAC | 3 cut(s) | 644, 1313, 1453 |
| Hpy8I | GTNNAC | 3 cut(s) | 644, 1313, 1453 |
| HpyAV | CCTTC | 8 cut(s) | 240, 351, 1507, 1546, 1631, 1652, 1748, 1915 |
| HpyCH4III | ACNGT | 6 cut(s) | 45, 712, 1137, 1380, 1504, 1537 |
| HpyCH4IV | ACGT | 4 cut(s) | 1018, 1271, 1366, 1769 |
| HpyCH4V | TGCA | 9 cut(s) | 107, 537, 637, 706, 815, 1084, 1221, 1583, 1912 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 690, 703, 788, 1093 |
| HpyF3I | CTNAG | 8 cut(s) | 279, 738, 837, 1067, 1155, 1242, 1302, 1830 |
| HpySE526I | ACGT | 4 cut(s) | 1018, 1271, 1366, 1769 |
| HspAI | GCGC | 1 cut(s) | 691 |
| KpnI | GGTACC | 1 cut(s) | 557 |
| Ksp22I | TGATCA | 3 cut(s) | 202, 672, 883 |
| Kzo9I | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| LmnI | GCTCC | 3 cut(s) | 1551, 1628, 1882 |
| Lsp1109I | GCAGC | 8 cut(s) | 67, 119, 270, 986, 1068, 1096, 1453, 1567 |
| LweI | GCATC | 3 cut(s) | 769, 800, 975 |
| MaeI | CTAG | 7 cut(s) | 116, 356, 446, 1023, 1254, 1277, 1860 |
| MaeII | ACGT | 4 cut(s) | 1018, 1271, 1366, 1769 |
| MaeIII | GTNAC | 7 cut(s) | 39, 45, 479, 712, 1050, 1166, 1272 |
| MalI | GATC | 8 cut(s) | 204, 674, 850, 885, 1295, 1595, 1614, 1967 |
| MbiI | CCGCTC | 1 cut(s) | 1396 |
| MboI | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| MflI | RGATCY | 1 cut(s) | 848 |
| MlsI | TGGCCA | 1 cut(s) | 1707 |
| MluCI | AATT | 7 cut(s) | 240, 253, 857, 1040, 1184, 1189, 1556 |
| MluNI | TGGCCA | 1 cut(s) | 1707 |
| MlyI | GAGTC | 1 cut(s) | 898 |
| MmeI | TCCRAC | 2 cut(s) | 279, 512 |
| Mox20I | TGGCCA | 1 cut(s) | 1707 |
| MroXI | GAANNNNTTC | 4 cut(s) | 861, 1556, 1560, 1641 |
| MscI | TGGCCA | 1 cut(s) | 1707 |
| MseI | TTAA | 3 cut(s) | 686, 1148, 1773 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1230 |
| Msp20I | TGGCCA | 1 cut(s) | 1707 |
| MspA1I | CMGCKG | 1 cut(s) | 1087 |
| MspI | CCGG | 2 cut(s) | 557, 752 |
| MspR9I | CCNGG | 6 cut(s) | 262, 291, 387, 753, 1047, 1308 |
| MvaI | CCWGG | 5 cut(s) | 262, 291, 387, 1047, 1308 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 690, 703, 788, 1093 |
| NciI | CCSGG | 1 cut(s) | 753 |
| NdeI | CATATG | 1 cut(s) | 1618 |
| NdeII | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| NlaIV | GGNNCC | 4 cut(s) | 555, 864, 1494, 1878 |
| NmuCI | GTSAC | 2 cut(s) | 712, 1050 |
| NsbI | TGCGCA | 1 cut(s) | 692 |
| NspI | RCATGY | 3 cut(s) | 332, 524, 1580 |
| PaeR7I | CTCGAG | 1 cut(s) | 1821 |
| PagI | TCATGA | 2 cut(s) | 333, 799 |
| PasI | CCCWGGG | 2 cut(s) | 290, 1046 |
| PceI | AGGCCT | 1 cut(s) | 1641 |
| PciI | ACATGT | 1 cut(s) | 328 |
| PdmI | GAANNNNTTC | 4 cut(s) | 861, 1556, 1560, 1641 |
| PfeI | GAWTC | 5 cut(s) | 362, 529, 548, 600, 1787 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 314 |
| PfoI | TCCNGGA | 1 cut(s) | 751 |
| PkrI | GCNGC | 9 cut(s) | 82, 109, 285, 990, 1001, 1083, 1086, 1443, 1582 |
| PleI | GAGTC | 1 cut(s) | 898 |
| PpsI | GAGTC | 1 cut(s) | 898 |
| PscI | ACATGT | 1 cut(s) | 328 |
| Psp6I | CCWGG | 5 cut(s) | 260, 289, 385, 1045, 1306 |
| PspGI | CCWGG | 5 cut(s) | 260, 289, 385, 1045, 1306 |
| PspN4I | GGNNCC | 4 cut(s) | 555, 864, 1494, 1878 |
| PstI | CTGCAG | 4 cut(s) | 109, 817, 1086, 1585 |
| PstNI | CAGNNNCTG | 1 cut(s) | 716 |
| PsuI | RGATCY | 1 cut(s) | 848 |
| PvuII | CAGCTG | 1 cut(s) | 1087 |
| RsaI | GTAC | 7 cut(s) | 555, 614, 643, 1139, 1252, 1258, 1377 |
| RsaNI | GTAC | 7 cut(s) | 554, 613, 642, 1138, 1251, 1257, 1376 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1230 |
| SaqAI | TTAA | 3 cut(s) | 686, 1148, 1773 |
| SatI | GCNGC | 9 cut(s) | 81, 108, 284, 989, 1000, 1082, 1085, 1442, 1581 |
| Sau3AI | GATC | 8 cut(s) | 202, 672, 848, 883, 1293, 1593, 1612, 1965 |
| ScaI | AGTACT | 2 cut(s) | 1252, 1258 |
| SchI | GAGTC | 1 cut(s) | 898 |
| ScrFI | CCNGG | 6 cut(s) | 262, 291, 387, 753, 1047, 1308 |
| SfaNI | GCATC | 3 cut(s) | 769, 800, 975 |
| SfcI | CTRYAG | 6 cut(s) | 84, 105, 813, 1082, 1477, 1581 |
| Sfr274I | CTCGAG | 1 cut(s) | 1821 |
| SlaI | CTCGAG | 1 cut(s) | 1821 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1230 |
| SmlI | CTYRAG | 1 cut(s) | 1821 |
| SmoI | CTYRAG | 1 cut(s) | 1821 |
| SpeI | ACTAGT | 1 cut(s) | 1253 |
| Sse9I | AATT | 7 cut(s) | 240, 253, 857, 1040, 1184, 1189, 1556 |
| SseBI | AGGCCT | 1 cut(s) | 1641 |
| SsiI | CCGC | 4 cut(s) | 224, 827, 988, 1396 |
| SspI | AATATT | 2 cut(s) | 732, 1809 |
| SspMI | CTAG | 7 cut(s) | 116, 356, 446, 1023, 1254, 1277, 1860 |
| StuI | AGGCCT | 1 cut(s) | 1641 |
| StyD4I | CCNGG | 6 cut(s) | 260, 289, 385, 751, 1045, 1306 |
| StyI | CCWWGG | 1 cut(s) | 1565 |
| TaaI | ACNGT | 6 cut(s) | 45, 712, 1137, 1380, 1504, 1537 |
| TaiI | ACGT | 4 cut(s) | 1021, 1274, 1369, 1772 |
| TaqI | TCGA | 5 cut(s) | 27, 212, 658, 1296, 1822 |
| TasI | AATT | 7 cut(s) | 240, 253, 857, 1040, 1184, 1189, 1556 |
| TatI | WGTACW | 3 cut(s) | 641, 1250, 1256 |
| TauI | GCSGC | 1 cut(s) | 991 |
| TfiI | GAWTC | 5 cut(s) | 362, 529, 548, 600, 1787 |
| Tru1I | TTAA | 3 cut(s) | 686, 1148, 1773 |
| Tru9I | TTAA | 3 cut(s) | 686, 1148, 1773 |
| TscAI | CASTG | 2 cut(s) | 708, 721 |
| TseFI | GTSAC | 2 cut(s) | 712, 1050 |
| TseI | GCWGC | 8 cut(s) | 80, 107, 283, 999, 1081, 1084, 1441, 1580 |
| Tsp45I | GTSAC | 2 cut(s) | 712, 1050 |
| TspDTI | ATGAA | 9 cut(s) | 222, 816, 885, 891, 1549, 1650, 1682, 1743, 1934 |
| TspRI | CASTG | 2 cut(s) | 708, 721 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 314 |
| XapI | RAATTY | 5 cut(s) | 240, 253, 1040, 1184, 1556 |
| XceI | RCATGY | 3 cut(s) | 332, 524, 1580 |
| XhoI | CTCGAG | 1 cut(s) | 1821 |
| XmnI | GAANNNNTTC | 4 cut(s) | 861, 1556, 1560, 1641 |
| XspI | CTAG | 7 cut(s) | 116, 356, 446, 1023, 1254, 1277, 1860 |
| ZrmI | AGTACT | 2 cut(s) | 1252, 1258 |