Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0017310

Physical Location & Seq

Genomic Coordinates Forward (+)

31204099 .. 31206423

Gene Structure 2325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG288900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGATGGTTGCTACGGACTTCGACTTGAATTTGTTACCATTACCTGAAGAAGAAGATGAGAAGACTTTGCAAGGTCCTGCAGAACAATATTCCACGGCGGCACCAAACCTTGAACAAATGCTATTCGGTGTAGATATAGCACACAGCGAGAACCAAGAGAGACATAAGCGAATGAGACTAGAACAATGCTCAGATGATCACAGATCAGTACTAATGCAGATGCAAACATCGATATCTCAACTGCCTCCTTCATATGATTCGTCTCGAGTTCAACCAAAACATTTTGTCAGCTCTTATGACACATCTAAGCTCCCCTCTGGGTGGTTGGATTGCCCATCGTTTGGTCAAGAGTTATATTGCATGATACCTTCTAAAGTGCCACTAGGTGAGTCCTACAATCATTATGTTCCTCCTGGTAAAAGATACTCACTCAAGCAAGTCATTGAGAAACAGAGACACCTGAAAAGAAAACTCGGTTTGGTGATCGATTTGACCAACACATTCAAATCTCGTTACTATCCAACCTCTGATTTGGAGAAGGAGGGTATTAGGCATGTCAAAATTCCATGCAAGGGGCGAGATTCTGTACCCGACAACCTTTCCGTGAATAGGTTTGTATACGAAGTCATACGATTCAAACAGATGTACCCTAAGAAGTATATCCTTGTGCATTGTACACATGGACACAATCGAACAGGGTATATGATCATACATTACTTAATGCGCATGCTACCGATGCATACAGTCACTGAAGCAATACAAACATTTGCTAAAGCGCGCCCTCCGGGAATATATAAACCCGACTACATTGATGCTCTATACTCATTCTACCATGAAAGGAAGCCTGCAGAAATTGTTTGCCCGCCTACTCCAGATTGGAAGAGGTCTTCAGAATTTGTTCCAGACAACGACGACGATCATCAAGGTTTAGCAGGTCCTTTGCATGAGGATATGGATACAGATATAATGACAAATGATGATATCTTGGGTGATGAGATACCTCCTGAGCAGCAAGAGGAGATGCGGCTGTTCTGCTGCCAAAGTCTTAATACGCGTTGTAAGAATATAAGCTCGGCATTCCCAGGGTCACACCCAGTTTCTCTTAGCAGAGAAAAGCTACAGCTGTTGAAGCAGAGGTATTATTATGCTACATGGAAAGCTGATGGAACACGATGCATGATGTTAATTACTAAGGACGGGTGTTACTTGATTGATAGAAAATTCAATTTTAGGAGAGTTCAAATGAGGTTTCCTTGCAAACACACAAATGGTTTAGCTGAGAATGGTACTAGTACTCACCACTATACGTTACTAGACGGGGAGATGGTGATTGATACTGAGCCAGGTTCACAGAAGAAGAAGAGAAGATACCTAATTTATGACATGATGGCAATCAACAACAGTCCTGTGGTAAAATTGCCTTTTCATGAGCGGTGGAAGATGATTGAGGAAGAAGTAATTCAGCCTCGGAATGAGCAGCGTCGAGTTTACCAAAGTAGGTATAATCCCAACTACAGATATGACTTGGAACCATTCACGGTGAGGAGGAAGGGCTTTTGGTTGCTCTCTACGGTTGAAAAGCTTCTGAAGGACTTCATTCCAAAGCTTTCACATGATGCAGATGGTGTTATCTTTCAGGGTTGGGATGATCCATACGTTCAGGGAGCTGATGAAGGCCTTCTAAAGTGGAAATATCCTGCTATGAACTCTATTGATTTTCTATTTGAGGTAAGTGGTGATGGCCGGCAACAGCTTTTTCTGTATGAACAAGGAAAGAAGAAACTAATGGAAGGATATAGGATTACGTTTAGGGATAGTGTGGAATCTTTTTATTCCGGAAAAATAATAGAGTGTTCTTGGGATTCTGAGACAAAAGAATGGGTCTATATGCGGACTAGGACTGATAAATCGGCTCCAAATGACATCAATACCCACGACAAGATAATGCAAAGCATAAAGGACAATATCACAGAGGACGTCTTGCTAAATGAGATATACAAGACCATTCGTCTGCCTATATATGTTCATAGAATACAGAAAGATAGCAAAGCAACAGAGAAACATGCAAGTTCAGCAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004484 GO:0004651 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008192 GO:0009452 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016311 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019222 GO:0034641 GO:0036260 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0050355 GO:0050789 GO:0060255 GO:0065007 GO:0070568 GO:0071704 GO:0090304 GO:0098501 GO:0098507 GO:0098518 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

693

Amino Acids

81.14

Weight (kDa)

7.59

Isoelectric Point (pI)

51.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	153 - 277	8.7e-11	Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme	PF01331	364 - 564	1.5e-71	mRNA capping enzyme, catalytic domain
mRNA_cap_C	PF03919	602 - 662	1.8e-18	mRNA capping enzyme, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017310)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g25120
rosa_chinensis	RchiOBHm_Chr7g0215321
rosa_laevigata	RLG00000002670
rosa_multiflora	Rmu_co8409009.1_g000001 Rmu_sc0021837.1_g000001
rosa_roxburghii	Rroxscaffold_3G00244280
rosa_rugosa	Rorug07G0152100
rosa_samantha	Rh7AG288900 Rh7BG280900 Rh7CG308700 Rh7DG292500
rosa_wichuraiana	Rw7G024700 Rw7G028500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1980
Acc16I	TGCGCA	1 cut(s)	725
Acc36I	ACCTGC	1 cut(s)	923
AccB1I	GGYRCC	1 cut(s)	100
AccB7I	CCANNNNNTGG	1 cut(s)	341
AccBSI	CCGCTC	1 cut(s)	1432
AccI	GTMKAC	1 cut(s)	618
AccII	CGCG	2 cut(s)	778, 1054
AccIII	TCCGGA	1 cut(s)	1835
AciI	CCGC	5 cut(s)	98, 863, 1024, 1432, 1891
AclWI	GGATC	1 cut(s)	1643
AcoI	YGGCCR	1 cut(s)	1741
AcsI	RAATTY	4 cut(s)	28, 561, 893, 1220
AcuI	CTGAAG	4 cut(s)	66, 771, 873, 1607
AcyI	GRCGYC	1 cut(s)	1977
AdeI	CACNNNGTG	1 cut(s)	386
AfaI	GTAC	6 cut(s)	210, 588, 647, 676, 1288, 1294
AfiI	CCNNNNNNNGG	4 cut(s)	321, 341, 572, 609
AflIII	ACRYGT	1 cut(s)	1052
AgsI	TTSAA	9 cut(s)	28, 113, 272, 505, 637, 1129, 1225, 1241, 1577
AhdI	GACNNNNNGTC	1 cut(s)	2007
AhlI	ACTAGT	1 cut(s)	1289
AjnI	CCWGG	3 cut(s)	412, 1081, 1342
Alw26I	GTCTC	5 cut(s)	154, 169, 267, 448, 1862
AlwI	GGATC	1 cut(s)	1643
AlwNI	CAGNNNCTG	1 cut(s)	749
Ama87I	CYCGRG	1 cut(s)	264
Aor13HI	TCCGGA	1 cut(s)	1835
AoxI	GGCC	2 cut(s)	1675, 1741
ApeKI	GCWGC	3 cut(s)	1009, 1035, 1477
ApoI	RAATTY	4 cut(s)	28, 561, 893, 1220
Asp700I	GAANNNNTTC	5 cut(s)	897, 1458, 1581, 1592, 1677
AspLEI	GCGC	3 cut(s)	726, 778, 780
AspS9I	GGNCC	2 cut(s)	74, 935
AsuC2I	CCSGG	1 cut(s)	786
AsuHPI	GGTGA	7 cut(s)	398, 493, 1001, 1289, 1339, 1552, 1748
AvaI	CYCGRG	1 cut(s)	264
AvaII	GGWCC	2 cut(s)	74, 935
BaeI	ACNNNNGTAYC	2 cut(s)	629, 662
BanI	GGYRCC	1 cut(s)	100
BarI	GAAGNNNNNNTAC	2 cut(s)	1352, 1384
BbsI	GAAGAC	2 cut(s)	68, 879
BbvI	GCAGC	3 cut(s)	1021, 1022, 1489
BccI	CCATC	6 cut(s)	343, 1157, 1318, 1381, 1616, 1733
BceAI	ACGGC	1 cut(s)	111
BciT130I	CCWGG	3 cut(s)	414, 1083, 1344
BciVI	GTATCC	1 cut(s)	949
BclI	TGATCA	2 cut(s)	196, 705
BcnI	CCSGG	1 cut(s)	786
BcoDI	GTCTC	5 cut(s)	154, 169, 267, 448, 1862
BcuI	ACTAGT	1 cut(s)	1289
BfaI	CTAG	5 cut(s)	179, 383, 1290, 1313, 1896
BfmI	CTRYAG	4 cut(s)	78, 846, 1118, 1513
BfuAI	ACCTGC	1 cut(s)	923
BfuI	GTATCC	1 cut(s)	949
BisI	GCNGC	5 cut(s)	99, 1010, 1025, 1036, 1478
BlsI	GCNGC	5 cut(s)	100, 1011, 1026, 1037, 1479
BmcAI	AGTACT	2 cut(s)	210, 1294
Bme1390I	CCNGG	4 cut(s)	414, 786, 1083, 1344
Bme18I	GGWCC	2 cut(s)	74, 935
BmeRI	GACNNNNNGTC	1 cut(s)	2007
BmeT110I	CYCGRG	1 cut(s)	264
BmgT120I	GGNCC	2 cut(s)	74, 935
BmiI	GGNNCC	3 cut(s)	102, 1530, 1914
BmrFI	CCNGG	4 cut(s)	414, 786, 1083, 1344
BmrI	ACTGGG	1 cut(s)	1088
BmsI	GCATC	6 cut(s)	210, 726, 802, 1011, 1163, 1606
BmuI	ACTGGG	1 cut(s)	1088
BpiI	GAAGAC	2 cut(s)	68, 879
BpmI	CTGGAG	1 cut(s)	855
Bpu10I	CCTNAGC	1 cut(s)	1005
BpuEI	CTTGAG	1 cut(s)	416
BpuMI	CCSGG	1 cut(s)	786
Bsa29I	ATCGAT	2 cut(s)	230, 486
BsaBI	GATNNNNATC	1 cut(s)	1391
BsaHI	GRCGYC	1 cut(s)	1977
BsaJI	CCNNGG	4 cut(s)	93, 1081, 1082, 1466
BsaWI	WCCGGW	1 cut(s)	1835
Bsc4I	CCNNNNNNNGG	4 cut(s)	321, 341, 572, 609
Bse118I	RCCGGY	1 cut(s)	1743
Bse1I	ACTGG	1 cut(s)	1094
Bse8I	GATNNNNATC	1 cut(s)	1391
BseAI	TCCGGA	1 cut(s)	1835
BseBI	CCWGG	3 cut(s)	414, 1083, 1344
BseCI	ATCGAT	2 cut(s)	230, 486
BseDI	CCNNGG	4 cut(s)	93, 1081, 1082, 1466
BseGI	GGATG	1 cut(s)	1651
BseJI	GATNNNNATC	1 cut(s)	1391
BseLI	CCNNNNNNNGG	4 cut(s)	321, 341, 572, 609
BseMII	CTCAG	5 cut(s)	204, 996, 1269, 1329, 1857
BseNI	ACTGG	1 cut(s)	1094
BsePI	GCGCGC	1 cut(s)	776
BseRI	GAGGAG	2 cut(s)	1031, 1558
BseXI	GCAGC	3 cut(s)	1021, 1022, 1489
Bsh1236I	CGCG	2 cut(s)	778, 1054
BshFI	GGCC	2 cut(s)	1677, 1743
BshNI	GGYRCC	1 cut(s)	100
BshVI	ATCGAT	2 cut(s)	230, 486
BsiHKCI	CYCGRG	1 cut(s)	264
BsiSI	CCGG	3 cut(s)	785, 1744, 1836
BslI	CCNNNNNNNGG	4 cut(s)	321, 341, 572, 609
BsmAI	GTCTC	5 cut(s)	154, 169, 267, 448, 1862
BsmBI	CGTCTC	1 cut(s)	267
BsmI	GAATGC	1 cut(s)	1076
BsnI	GGCC	2 cut(s)	1677, 1743
BsoBI	CYCGRG	1 cut(s)	264
Bsp13I	TCCGGA	1 cut(s)	1835
Bsp1407I	TGTACA	1 cut(s)	674
Bsp143I	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
BspACI	CCGC	5 cut(s)	98, 863, 1024, 1432, 1891
BspANI	GGCC	2 cut(s)	1677, 1743
BspCNI	CTCAG	5 cut(s)	203, 997, 1270, 1330, 1858
BspDI	ATCGAT	2 cut(s)	230, 486
BspEI	TCCGGA	1 cut(s)	1835
BspFNI	CGCG	2 cut(s)	778, 1054
BspHI	TCATGA	1 cut(s)	1426
BspLI	GGNNCC	3 cut(s)	102, 1530, 1914
BspMAI	CTGCAG	2 cut(s)	82, 850
BspMI	ACCTGC	1 cut(s)	923
BspPI	GGATC	1 cut(s)	1643
BspT107I	GGYRCC	1 cut(s)	100
BsrBI	CCGCTC	1 cut(s)	1432
BsrFI	RCCGGY	1 cut(s)	1743
BsrGI	TGTACA	1 cut(s)	674
BsrI	ACTGG	1 cut(s)	1094
BssAI	RCCGGY	1 cut(s)	1743
BssECI	CCNNGG	4 cut(s)	93, 1081, 1082, 1466
BssHII	GCGCGC	1 cut(s)	776
BssMI	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
BssNAI	GTATAC	1 cut(s)	619
BssNI	GRCGYC	1 cut(s)	1977
Bst1107I	GTATAC	1 cut(s)	619
Bst2UI	CCWGG	3 cut(s)	414, 1083, 1344
Bst4CI	ACNGT	4 cut(s)	745, 1403, 1540, 1573
Bst6I	CTCTTC	2 cut(s)	875, 1355
BstACI	GRCGYC	1 cut(s)	1977
BstAUI	TGTACA	1 cut(s)	674
BstC8I	GCNNGC	5 cut(s)	728, 778, 846, 863, 1745
BstDEI	CTNAG	9 cut(s)	190, 306, 651, 1005, 1103, 1191, 1278, 1338, 1866
BstDSI	CCRYGG	1 cut(s)	93
BstF5I	GGATG	1 cut(s)	1651
BstFNI	CGCG	2 cut(s)	778, 1054
BstHHI	GCGC	3 cut(s)	726, 778, 780
BstKTI	GATC	6 cut(s)	199, 206, 486, 708, 919, 1651
BstMAI	GTCTC	5 cut(s)	154, 169, 267, 448, 1862
BstMBI	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
BstMWI	GCNNNNNNNGC	3 cut(s)	736, 1129, 2072
BstNI	CCWGG	3 cut(s)	414, 1083, 1344
BstNSI	RCATGY	3 cut(s)	557, 730, 2066
BstSCI	CCNGG	4 cut(s)	412, 784, 1081, 1342
BstSFI	CTRYAG	4 cut(s)	78, 846, 1118, 1513
BstUI	CGCG	2 cut(s)	778, 1054
BstV1I	GCAGC	3 cut(s)	1021, 1022, 1489
BstV2I	GAAGAC	2 cut(s)	68, 879
BstZ17I	GTATAC	1 cut(s)	619
Bsu15I	ATCGAT	2 cut(s)	230, 486
BsuI	GTATCC	1 cut(s)	949
BsuRI	GGCC	2 cut(s)	1677, 1743
BsuTUI	ATCGAT	2 cut(s)	230, 486
BtgI	CCRYGG	1 cut(s)	93
BtsCI	GGATG	1 cut(s)	1651
BtsIMutI	CAGTG	1 cut(s)	747
BveI	ACCTGC	1 cut(s)	923
Cac8I	GCNNGC	5 cut(s)	728, 778, 846, 863, 1745
CaiI	CAGNNNCTG	1 cut(s)	749
CciI	TCATGA	1 cut(s)	1426
CfoI	GCGC	3 cut(s)	726, 778, 780
Cfr10I	RCCGGY	1 cut(s)	1743
Cfr13I	GGNCC	2 cut(s)	74, 935
ClaI	ATCGAT	2 cut(s)	230, 486
CseI	GACGC	1 cut(s)	1469
Csp6I	GTAC	6 cut(s)	209, 587, 646, 675, 1287, 1293
CviQI	GTAC	6 cut(s)	209, 587, 646, 675, 1287, 1293
DdeI	CTNAG	9 cut(s)	190, 306, 651, 1005, 1103, 1191, 1278, 1338, 1866
DpnI	GATC	6 cut(s)	198, 205, 485, 707, 918, 1650
DpnII	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
DraIII	CACNNNGTG	1 cut(s)	386
DriI	GACNNNNNGTC	1 cut(s)	2007
EaeI	YGGCCR	1 cut(s)	1741
Eam1104I	CTCTTC	2 cut(s)	875, 1355
Eam1105I	GACNNNNNGTC	1 cut(s)	2007
EarI	CTCTTC	2 cut(s)	875, 1355
Eco147I	AGGCCT	1 cut(s)	1677
Eco32I	GATATC	2 cut(s)	234, 982
Eco47I	GGWCC	2 cut(s)	74, 935
Eco57I	CTGAAG	4 cut(s)	66, 771, 873, 1607
Eco88I	CYCGRG	1 cut(s)	264
EcoO109I	RGGNCCY	2 cut(s)	74, 935
EcoRII	CCWGG	3 cut(s)	412, 1081, 1342
EcoRV	GATATC	2 cut(s)	234, 982
EcoT22I	ATGCAT	2 cut(s)	741, 1178
Esp3I	CGTCTC	1 cut(s)	267
FauI	CCCGC	1 cut(s)	870
FauNDI	CATATG	1 cut(s)	253
FbaI	TGATCA	2 cut(s)	196, 705
FblI	GTMKAC	1 cut(s)	618
Fnu4HI	GCNGC	5 cut(s)	99, 1010, 1025, 1036, 1478
FokI	GGATG	1 cut(s)	1658
Fsp4HI	GCNGC	5 cut(s)	99, 1010, 1025, 1036, 1478
FspAI	RTGCGCAY	1 cut(s)	725
FspBI	CTAG	5 cut(s)	179, 383, 1290, 1313, 1896
FspI	TGCGCA	1 cut(s)	725
GlaI	GCGC	3 cut(s)	725, 777, 779
GluI	GCNGC	5 cut(s)	99, 1010, 1025, 1036, 1478
GsuI	CTGGAG	1 cut(s)	855
HaeIII	GGCC	2 cut(s)	1677, 1743
HapII	CCGG	3 cut(s)	785, 1744, 1836
HgaI	GACGC	1 cut(s)	1469
HhaI	GCGC	3 cut(s)	726, 778, 780
Hin1I	GRCGYC	1 cut(s)	1977
Hin6I	GCGC	3 cut(s)	724, 776, 778
HinP1I	GCGC	3 cut(s)	724, 776, 778
HindIII	AAGCTT	2 cut(s)	1580, 1604
HinfI	GANTC	6 cut(s)	257, 389, 581, 633, 1823, 1862
HpaII	CCGG	3 cut(s)	785, 1744, 1836
HphI	GGTGA	7 cut(s)	398, 493, 1001, 1289, 1339, 1552, 1748
Hpy166II	GTNNAC	4 cut(s)	619, 677, 1349, 1489
Hpy188I	TCNGA	6 cut(s)	193, 529, 892, 1470, 1587, 1867
Hpy188III	TCNNGA	7 cut(s)	264, 347, 872, 902, 1004, 1427, 1836
Hpy8I	GTNNAC	4 cut(s)	619, 677, 1349, 1489
Hpy99I	CGWCG	3 cut(s)	914, 917, 1485
HpyAV	CCTTC	8 cut(s)	258, 378, 532, 1543, 1582, 1667, 1688, 1784
HpyCH4III	ACNGT	4 cut(s)	745, 1403, 1540, 1573
HpyCH4IV	ACGT	4 cut(s)	1307, 1656, 1805, 1977
HpyF10VI	GCNNNNNNNGC	3 cut(s)	736, 1129, 2072
HpyF3I	CTNAG	9 cut(s)	190, 306, 651, 1005, 1103, 1191, 1278, 1338, 1866
HpySE526I	ACGT	4 cut(s)	1307, 1656, 1805, 1977
Hsp92I	GRCGYC	1 cut(s)	1977
HspAI	GCGC	3 cut(s)	724, 776, 778
Kpn2I	TCCGGA	1 cut(s)	1835
KroI	GCCGGC	1 cut(s)	1743
KroNI	GCCGGC	1 cut(s)	1745
Ksp22I	TGATCA	2 cut(s)	196, 705
Kzo9I	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
LmnI	GCTCC	3 cut(s)	315, 1664, 1918
Lsp1109I	GCAGC	3 cut(s)	1021, 1022, 1489
LweI	GCATC	6 cut(s)	210, 726, 802, 1011, 1163, 1606
MaeI	CTAG	5 cut(s)	179, 383, 1290, 1313, 1896
MaeII	ACGT	4 cut(s)	1307, 1656, 1805, 1977
MaeIII	GTNAC	6 cut(s)	33, 512, 745, 1086, 1202, 1308
MalI	GATC	6 cut(s)	198, 205, 485, 707, 918, 1650
MbiI	CCGCTC	1 cut(s)	1432
MboI	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
MluI	ACGCGT	1 cut(s)	1052
MlyI	GAGTC	1 cut(s)	398
MmeI	TCCRAC	2 cut(s)	306, 545
Mph1103I	ATGCAT	2 cut(s)	741, 1178
MroI	TCCGGA	1 cut(s)	1835
MroNI	GCCGGC	1 cut(s)	1743
MroXI	GAANNNNTTC	5 cut(s)	897, 1458, 1581, 1592, 1677
MseI	TTAA	3 cut(s)	719, 1047, 1184
MslI	CAYNNNNRTG	1 cut(s)	1266
MspA1I	CMGCKG	1 cut(s)	1123
MspI	CCGG	3 cut(s)	785, 1744, 1836
MspR9I	CCNGG	4 cut(s)	414, 786, 1083, 1344
Mva1269I	GAATGC	1 cut(s)	1076
MvaI	CCWGG	3 cut(s)	414, 1083, 1344
MvnI	CGCG	2 cut(s)	778, 1054
MwoI	GCNNNNNNNGC	3 cut(s)	736, 1129, 2072
NaeI	GCCGGC	1 cut(s)	1745
NciI	CCSGG	1 cut(s)	786
NdeI	CATATG	1 cut(s)	253
NdeII	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
NgoMIV	GCCGGC	1 cut(s)	1743
NlaIV	GGNNCC	3 cut(s)	102, 1530, 1914
NmeAIII	GCCGAG	1 cut(s)	1052
NmuCI	GTSAC	2 cut(s)	745, 1086
NsbI	TGCGCA	1 cut(s)	725
NsiI	ATGCAT	2 cut(s)	741, 1178
NspI	RCATGY	3 cut(s)	557, 730, 2066
PaeI	GCATGC	1 cut(s)	730
PaeR7I	CTCGAG	1 cut(s)	264
PagI	TCATGA	1 cut(s)	1426
PasI	CCCWGGG	1 cut(s)	1082
PauI	GCGCGC	1 cut(s)	776
PceI	AGGCCT	1 cut(s)	1677
PctI	GAATGC	1 cut(s)	1076
PdiI	GCCGGC	1 cut(s)	1745
PdmI	GAANNNNTTC	5 cut(s)	897, 1458, 1581, 1592, 1677
PfeI	GAWTC	5 cut(s)	257, 581, 633, 1823, 1862
PflMI	CCANNNNNTGG	1 cut(s)	341
PfoI	TCCNGGA	1 cut(s)	784
PkrI	GCNGC	5 cut(s)	100, 1011, 1026, 1037, 1479
PleI	GAGTC	1 cut(s)	397
PpsI	GAGTC	1 cut(s)	397
PpuMI	RGGWCCY	2 cut(s)	74, 935
Psp5II	RGGWCCY	2 cut(s)	74, 935
Psp6I	CCWGG	3 cut(s)	412, 1081, 1342
PspGI	CCWGG	3 cut(s)	412, 1081, 1342
PspN4I	GGNNCC	3 cut(s)	102, 1530, 1914
PspPI	GGNCC	2 cut(s)	74, 935
PspPPI	RGGWCCY	2 cut(s)	74, 935
PstI	CTGCAG	2 cut(s)	82, 850
PstNI	CAGNNNCTG	1 cut(s)	749
PteI	GCGCGC	1 cut(s)	776
PvuII	CAGCTG	1 cut(s)	1123
RsaI	GTAC	6 cut(s)	210, 588, 647, 676, 1288, 1294
RsaNI	GTAC	6 cut(s)	209, 587, 646, 675, 1287, 1293
RseI	CAYNNNNRTG	1 cut(s)	1266
SaqAI	TTAA	3 cut(s)	719, 1047, 1184
SatI	GCNGC	5 cut(s)	99, 1010, 1025, 1036, 1478
Sau3AI	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
Sau96I	GGNCC	2 cut(s)	74, 935
ScaI	AGTACT	2 cut(s)	210, 1294
SchI	GAGTC	1 cut(s)	398
ScrFI	CCNGG	4 cut(s)	414, 786, 1083, 1344
SfaNI	GCATC	6 cut(s)	210, 726, 802, 1011, 1163, 1606
SfcI	CTRYAG	4 cut(s)	78, 846, 1118, 1513
Sfr274I	CTCGAG	1 cut(s)	264
SinI	GGWCC	2 cut(s)	74, 935
SlaI	CTCGAG	1 cut(s)	264
SmiMI	CAYNNNNRTG	1 cut(s)	1266
SmlI	CTYRAG	2 cut(s)	264, 431
SmoI	CTYRAG	2 cut(s)	264, 431
SpeI	ACTAGT	1 cut(s)	1289
SphI	GCATGC	1 cut(s)	730
SseBI	AGGCCT	1 cut(s)	1677
SsiI	CCGC	5 cut(s)	98, 863, 1024, 1432, 1891
SspI	AATATT	1 cut(s)	89
SspMI	CTAG	5 cut(s)	179, 383, 1290, 1313, 1896
StuI	AGGCCT	1 cut(s)	1677
StyD4I	CCNGG	4 cut(s)	412, 784, 1081, 1342
TaaI	ACNGT	4 cut(s)	745, 1403, 1540, 1573
TaiI	ACGT	4 cut(s)	1310, 1659, 1808, 1980
TaqI	TCGA	6 cut(s)	21, 230, 265, 486, 691, 1483
TatI	WGTACW	3 cut(s)	208, 674, 1292
TauI	GCSGC	2 cut(s)	101, 1027
TfiI	GAWTC	5 cut(s)	257, 581, 633, 1823, 1862
Tru1I	TTAA	3 cut(s)	719, 1047, 1184
Tru9I	TTAA	3 cut(s)	719, 1047, 1184
TscAI	CASTG	1 cut(s)	754
TseFI	GTSAC	2 cut(s)	745, 1086
TseI	GCWGC	3 cut(s)	1009, 1035, 1477
Tsp45I	GTSAC	2 cut(s)	745, 1086
TspDTI	ATGAA	8 cut(s)	240, 849, 1415, 1585, 1686, 1718, 1779, 2015
TspGWI	ACGGA	2 cut(s)	29, 592
TspRI	CASTG	1 cut(s)	754
Van91I	CCANNNNNTGG	1 cut(s)	341
VpaK11BI	GGWCC	2 cut(s)	74, 935
XapI	RAATTY	4 cut(s)	28, 561, 893, 1220
XceI	RCATGY	3 cut(s)	557, 730, 2066
XhoI	CTCGAG	1 cut(s)	264
XmiI	GTMKAC	1 cut(s)	618
XmnI	GAANNNNTTC	5 cut(s)	897, 1458, 1581, 1592, 1677
XspI	CTAG	5 cut(s)	179, 383, 1290, 1313, 1896
ZraI	GACGTC	1 cut(s)	1978
ZrmI	AGTACT	2 cut(s)	210, 1294
Zsp2I	ATGCAT	2 cut(s)	741, 1178

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.