Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0017310

Physical Location & Seq

Genomic Coordinates Reverse (-)

37833304 .. 37835485

Gene Structure 2182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002670

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGACTTCGACTTGAATTTGTTACCATTACCTGAAGAAGAAGATAAGCAGACTTTGCAAGGTCCTGCAGAACCATATTCCACGGCGGCACCAAACCTTGAACAAACGCTATTCGGTGTAGATATAGCACACAGCGAGAATCAAGAGAGACATAAGCGAATGAGACTAGAACAATGCTCAGATGATCACAGATCAGTACTAATGAAGATGCAAACATCGATATCTCAACCGCCTCCTTCATATGATTCGTCTCGAGTTCAACCAAAACATTTTGTCAGGTCTTATGACACATCTAAGCTCCCCTCTGGGTGGTTGGATTGCCCATCGTTTGGTCAAGAGATATATTGCATGATACCTTCTAAAGTGCCACTAGGTGAGTCCTACAATCATTATGTTCCTCCTGGTAAAAGATACTCACTCAAGCAAGTCATTCAGAAACAGAGACACCTGAAAAGAAAACTCGGTTTGGTGATCGATTTGACCAACACATTCAAATCTCGTTACTATCCAACCTCTGATTTGGAGAAAGAGGGCATCAGGCACGTCAAAATTCCATGCAAAGGGCGAGATTCTGTACCCGACAACCTTTCCGTGAATAGGTTTGTATACGAGGTCATACGATTCAAACAGATGTACCCTAAGAATTATATCCTTGTGCATTGTACACATGGACACAATCGAACAGGGTATATGATCATACATTACTTAATGCGCATGCTACCGATGCATACAGTCACTGAAGCAATACAAACATTTGCTAAAGCGCGCCCTCCGGGAATATATAAACCCGACTACATTGATGCTCTATACTCATTCTACCATGAAAGGAAGCCTGCAGAAATTGTTTGCCCGCCTACTCCAGATTGGAAGAGATCTTCAGGATTTGTTCCAGATGACGACGATGATCATCAAGGTTTAGCAGGTCCTTTGCATGAGGATATGGATACAGATATAATGACAAATGATGATATCTTGGGTGATGAGATACCTCCTGAGCAGCAAGAGGAGATGCGGCTGTTCTGCTGCCAAAGTCTTAATGCGCGTTGTAAGAATATAAGCTCGGCATTCCCAGGGTCACACCCAGTTTCTCTTAGCAGAGAAAAGCTACAGCTGTTGAAGCAGAGGTATTATTATGCTACATGGAAAGCTGATGGAACACGATACATGATGTTAATTACTAAGGACGGGTGTTACTTGATTGATAGAAAATTCAATTTTAGGAGAGTTCAAATGAGGTTTCCTTGCAAACACACAAATGGTTTAGCTGAGAATGGTACTAGTACTCACCACTATACGTTACTAGACGGGGAGATGGTGATTGATACTGAGCCAGGTTCACAGAAGAAGAAGAAGAGAAGATACCTAATTTATGACATGATGGCAATCAACAACCGTCCTGTGGTAAAATTGCCTTTTCATGAGCGGTGGAAGATGATTGAGGAAGAAGTAATTCAGCCTCGGAATGAGCAGCGTCGAGTTTACCAAAGTAGGAATAATCCCAACTACAGATATGACTTGGAACCATTCACGGTGAGGAGGAAGGGCTTTTGGTTGCTCTCTGCGGTTGAAAAGCTTCTGAAGGACTTCATTCCAAAGCTTTCACATGATGCAGATGGTGTGATCTTCCAGGGTTGGGATGATCCATACGTTCAGGGAGCAGATGAAGGCCTTCTCAAGTGGAAATATCCTGCTATGAACTCTATTGATTTTCTATTTGAGGTAAGTGGTGATGGCCAGCAACAGCTTTTTCTGTATGAACAAGGAAAGAAGAAACTAATGGAAGGATATAGGATTACGTTTAGGGATAGTGTGGAATCTTTTTATTCCGGAAAAATAGTAGAGTGTTCTTGGGATTCTGAGACAAAAGAATGGGTCTATATGCGGACTAGGACTGATAAATTGGCTCCAAATGACATCAATACCCACGACAAGATAATGCAAAGCATAAAGGACAATATCACAGAGGATGTCTTGCTAAATGAGATATATAAGACCATTCGTCTGCCTATATATGTTCATAGAATACAGAAAGATAGCAAAGCAGCAGAGAAGTATGCAAGTTCAGCAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004484 GO:0004651 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008192 GO:0009452 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016311 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019222 GO:0034641 GO:0036260 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0050355 GO:0050789 GO:0060255 GO:0065007 GO:0070568 GO:0071704 GO:0090304 GO:0098501 GO:0098507 GO:0098518 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

691

Amino Acids

80.77

Weight (kDa)

8.35

Isoelectric Point (pI)

52.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	148 - 273	1.8e-10	Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme	PF01331	360 - 561	1e-71	mRNA capping enzyme, catalytic domain
mRNA_cap_C	PF03919	566 - 659	3.9e-18	mRNA capping enzyme, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017310)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g25120
rosa_chinensis	RchiOBHm_Chr7g0215321
rosa_laevigata	RLG00000002670
rosa_multiflora	Rmu_co8409009.1_g000001 Rmu_sc0021837.1_g000001
rosa_roxburghii	Rroxscaffold_3G00244280
rosa_rugosa	Rorug07G0152100
rosa_samantha	Rh7AG288900 Rh7BG280900 Rh7CG308700 Rh7DG292500
rosa_wichuraiana	Rw7G024700 Rw7G028500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	713
Acc36I	ACCTGC	1 cut(s)	911
AccB1I	GGYRCC	1 cut(s)	88
AccB7I	CCANNNNNTGG	1 cut(s)	329
AccBSI	CCGCTC	1 cut(s)	1423
AccI	GTMKAC	1 cut(s)	606
AccII	CGCG	2 cut(s)	766, 1042
AccIII	TCCGGA	1 cut(s)	1826
AciI	CCGC	7 cut(s)	86, 230, 851, 1012, 1423, 1562, 1882
AclWI	GGATC	1 cut(s)	1634
AcoI	YGGCCR	1 cut(s)	1732
AcsI	RAATTY	3 cut(s)	16, 549, 1208
AcuI	CTGAAG	4 cut(s)	54, 759, 861, 1598
AdeI	CACNNNGTG	1 cut(s)	374
AfaI	GTAC	6 cut(s)	198, 576, 635, 664, 1276, 1282
AfiI	CCNNNNNNNGG	6 cut(s)	309, 329, 560, 597, 1399, 1633
AgsI	TTSAA	9 cut(s)	16, 101, 260, 493, 625, 1117, 1213, 1229, 1568
AhdI	GACNNNNNGTC	1 cut(s)	1998
AhlI	ACTAGT	1 cut(s)	1277
AjiI	CACGTC	1 cut(s)	544
AjnI	CCWGG	4 cut(s)	400, 1069, 1330, 1626
AluBI	AGCT	9 cut(s)	298, 1059, 1105, 1111, 1148, 1265, 1573, 1597, 1744
AluI	AGCT	9 cut(s)	298, 1059, 1105, 1111, 1148, 1265, 1573, 1597, 1744
Alw26I	GTCTC	5 cut(s)	142, 157, 255, 436, 1853
AlwI	GGATC	1 cut(s)	1634
AlwNI	CAGNNNCTG	1 cut(s)	737
Ama87I	CYCGRG	1 cut(s)	252
Aor13HI	TCCGGA	1 cut(s)	1826
AoxI	GGCC	2 cut(s)	1666, 1732
ApeKI	GCWGC	4 cut(s)	997, 1023, 1468, 2042
ApoI	RAATTY	3 cut(s)	16, 549, 1208
Asp700I	GAANNNNTTC	4 cut(s)	1449, 1572, 1583, 1668
AspLEI	GCGC	4 cut(s)	714, 766, 768, 1042
AspS9I	GGNCC	2 cut(s)	62, 923
AsuC2I	CCSGG	1 cut(s)	774
AsuHPI	GGTGA	7 cut(s)	386, 481, 989, 1277, 1327, 1543, 1739
AvaI	CYCGRG	1 cut(s)	252
AvaII	GGWCC	2 cut(s)	62, 923
BaeI	ACNNNNGTAYC	2 cut(s)	617, 650
BalI	TGGCCA	1 cut(s)	1734
BanI	GGYRCC	1 cut(s)	88
BarI	GAAGNNNNNNTAC	2 cut(s)	1343, 1375
BbvI	GCAGC	4 cut(s)	1009, 1010, 1480, 2054
BccI	CCATC	6 cut(s)	331, 1145, 1306, 1372, 1607, 1724
BceAI	ACGGC	1 cut(s)	99
BciT130I	CCWGG	4 cut(s)	402, 1071, 1332, 1628
BciVI	GTATCC	1 cut(s)	937
BclI	TGATCA	3 cut(s)	184, 693, 904
BcnI	CCSGG	1 cut(s)	774
BcoDI	GTCTC	5 cut(s)	142, 157, 255, 436, 1853
BcuI	ACTAGT	1 cut(s)	1277
BfaI	CTAG	5 cut(s)	167, 371, 1278, 1301, 1887
BfmI	CTRYAG	4 cut(s)	66, 834, 1106, 1504
BfuAI	ACCTGC	1 cut(s)	911
BfuI	GTATCC	1 cut(s)	937
BglII	AGATCT	1 cut(s)	872
BisI	GCNGC	6 cut(s)	87, 998, 1013, 1024, 1469, 2043
BlsI	GCNGC	6 cut(s)	88, 999, 1014, 1025, 1470, 2044
BmcAI	AGTACT	2 cut(s)	198, 1282
Bme1390I	CCNGG	5 cut(s)	402, 774, 1071, 1332, 1628
Bme18I	GGWCC	2 cut(s)	62, 923
BmeRI	GACNNNNNGTC	1 cut(s)	1998
BmeT110I	CYCGRG	1 cut(s)	252
BmgBI	CACGTC	1 cut(s)	544
BmgT120I	GGNCC	2 cut(s)	62, 923
BmiI	GGNNCC	3 cut(s)	90, 1521, 1905
BmrFI	CCNGG	5 cut(s)	402, 774, 1071, 1332, 1628
BmrI	ACTGGG	1 cut(s)	1076
BmsI	GCATC	6 cut(s)	198, 543, 714, 790, 999, 1597
BmuI	ACTGGG	1 cut(s)	1076
BpmI	CTGGAG	1 cut(s)	843
Bpu10I	CCTNAGC	1 cut(s)	993
BpuEI	CTTGAG	2 cut(s)	404, 1658
BpuMI	CCSGG	1 cut(s)	774
Bsa29I	ATCGAT	2 cut(s)	218, 474
BsaBI	GATNNNNATC	2 cut(s)	906, 1382
BsaJI	CCNNGG	5 cut(s)	81, 1069, 1070, 1457, 1627
BsaWI	WCCGGW	1 cut(s)	1826
Bsc4I	CCNNNNNNNGG	6 cut(s)	309, 329, 560, 597, 1399, 1633
Bse1I	ACTGG	1 cut(s)	1082
Bse8I	GATNNNNATC	2 cut(s)	906, 1382
BseAI	TCCGGA	1 cut(s)	1826
BseBI	CCWGG	4 cut(s)	402, 1071, 1332, 1628
BseCI	ATCGAT	2 cut(s)	218, 474
BseDI	CCNNGG	5 cut(s)	81, 1069, 1070, 1457, 1627
BseGI	GGATG	2 cut(s)	1642, 1972
BseJI	GATNNNNATC	2 cut(s)	906, 1382
BseLI	CCNNNNNNNGG	6 cut(s)	309, 329, 560, 597, 1399, 1633
BseMII	CTCAG	5 cut(s)	192, 984, 1257, 1317, 1848
BseNI	ACTGG	1 cut(s)	1082
BsePI	GCGCGC	1 cut(s)	764
BseRI	GAGGAG	2 cut(s)	1019, 1549
BseXI	GCAGC	4 cut(s)	1009, 1010, 1480, 2054
Bsh1236I	CGCG	2 cut(s)	766, 1042
BshFI	GGCC	2 cut(s)	1668, 1734
BshNI	GGYRCC	1 cut(s)	88
BshVI	ATCGAT	2 cut(s)	218, 474
BsiHKCI	CYCGRG	1 cut(s)	252
BsiSI	CCGG	2 cut(s)	773, 1827
BslI	CCNNNNNNNGG	6 cut(s)	309, 329, 560, 597, 1399, 1633
BsmAI	GTCTC	5 cut(s)	142, 157, 255, 436, 1853
BsmBI	CGTCTC	1 cut(s)	255
BsmI	GAATGC	1 cut(s)	1064
BsnI	GGCC	2 cut(s)	1668, 1734
BsoBI	CYCGRG	1 cut(s)	252
Bsp13I	TCCGGA	1 cut(s)	1826
Bsp1407I	TGTACA	1 cut(s)	662
Bsp143I	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
BspACI	CCGC	7 cut(s)	86, 230, 851, 1012, 1423, 1562, 1882
BspANI	GGCC	2 cut(s)	1668, 1734
BspCNI	CTCAG	5 cut(s)	191, 985, 1258, 1318, 1849
BspDI	ATCGAT	2 cut(s)	218, 474
BspEI	TCCGGA	1 cut(s)	1826
BspFNI	CGCG	2 cut(s)	766, 1042
BspHI	TCATGA	1 cut(s)	1417
BspLI	GGNNCC	3 cut(s)	90, 1521, 1905
BspMAI	CTGCAG	2 cut(s)	70, 838
BspMI	ACCTGC	1 cut(s)	911
BspPI	GGATC	1 cut(s)	1634
BspT107I	GGYRCC	1 cut(s)	88
BsrBI	CCGCTC	1 cut(s)	1423
BsrGI	TGTACA	1 cut(s)	662
BsrI	ACTGG	1 cut(s)	1082
BssECI	CCNNGG	5 cut(s)	81, 1069, 1070, 1457, 1627
BssHII	GCGCGC	1 cut(s)	764
BssMI	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
BssNAI	GTATAC	1 cut(s)	607
Bst1107I	GTATAC	1 cut(s)	607
Bst2UI	CCWGG	4 cut(s)	402, 1071, 1332, 1628
Bst4CI	ACNGT	3 cut(s)	733, 1394, 1531
Bst6I	CTCTTC	2 cut(s)	863, 1346
BstAPI	GCANNNNNTGC	1 cut(s)	55
BstAUI	TGTACA	1 cut(s)	662
BstC8I	GCNNGC	5 cut(s)	716, 766, 834, 851, 1736
BstDEI	CTNAG	9 cut(s)	178, 294, 639, 993, 1091, 1179, 1266, 1326, 1857
BstDSI	CCRYGG	1 cut(s)	81
BstF5I	GGATG	2 cut(s)	1642, 1972
BstFNI	CGCG	2 cut(s)	766, 1042
BstHHI	GCGC	4 cut(s)	714, 766, 768, 1042
BstKTI	GATC	8 cut(s)	187, 194, 474, 696, 875, 907, 1623, 1642
BstMAI	GTCTC	5 cut(s)	142, 157, 255, 436, 1853
BstMBI	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
BstMWI	GCNNNNNNNGC	4 cut(s)	55, 724, 1117, 2063
BstNI	CCWGG	4 cut(s)	402, 1071, 1332, 1628
BstNSI	RCATGY	1 cut(s)	718
BstSCI	CCNGG	5 cut(s)	400, 772, 1069, 1330, 1626
BstSFI	CTRYAG	4 cut(s)	66, 834, 1106, 1504
BstUI	CGCG	2 cut(s)	766, 1042
BstV1I	GCAGC	4 cut(s)	1009, 1010, 1480, 2054
BstX2I	RGATCY	1 cut(s)	872
BstYI	RGATCY	1 cut(s)	872
BstZ17I	GTATAC	1 cut(s)	607
Bsu15I	ATCGAT	2 cut(s)	218, 474
BsuI	GTATCC	1 cut(s)	937
BsuRI	GGCC	2 cut(s)	1668, 1734
BsuTUI	ATCGAT	2 cut(s)	218, 474
BtgI	CCRYGG	1 cut(s)	81
BtrI	CACGTC	1 cut(s)	544
BtsCI	GGATG	2 cut(s)	1642, 1972
BtsIMutI	CAGTG	1 cut(s)	735
BveI	ACCTGC	1 cut(s)	911
Cac8I	GCNNGC	5 cut(s)	716, 766, 834, 851, 1736
CaiI	CAGNNNCTG	1 cut(s)	737
CciI	TCATGA	1 cut(s)	1417
CfoI	GCGC	4 cut(s)	714, 766, 768, 1042
Cfr13I	GGNCC	2 cut(s)	62, 923
ClaI	ATCGAT	2 cut(s)	218, 474
CseI	GACGC	1 cut(s)	1460
Csp6I	GTAC	6 cut(s)	197, 575, 634, 663, 1275, 1281
CviQI	GTAC	6 cut(s)	197, 575, 634, 663, 1275, 1281
DdeI	CTNAG	9 cut(s)	178, 294, 639, 993, 1091, 1179, 1266, 1326, 1857
DpnI	GATC	8 cut(s)	186, 193, 473, 695, 874, 906, 1622, 1641
DpnII	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
DraIII	CACNNNGTG	1 cut(s)	374
DriI	GACNNNNNGTC	1 cut(s)	1998
EaeI	YGGCCR	1 cut(s)	1732
Eam1104I	CTCTTC	2 cut(s)	863, 1346
Eam1105I	GACNNNNNGTC	1 cut(s)	1998
EarI	CTCTTC	2 cut(s)	863, 1346
Eco147I	AGGCCT	1 cut(s)	1668
Eco32I	GATATC	2 cut(s)	222, 970
Eco47I	GGWCC	2 cut(s)	62, 923
Eco57I	CTGAAG	4 cut(s)	54, 759, 861, 1598
Eco88I	CYCGRG	1 cut(s)	252
EcoO109I	RGGNCCY	2 cut(s)	62, 923
EcoRII	CCWGG	4 cut(s)	400, 1069, 1330, 1626
EcoRV	GATATC	2 cut(s)	222, 970
EcoT22I	ATGCAT	1 cut(s)	729
Esp3I	CGTCTC	1 cut(s)	255
FauI	CCCGC	1 cut(s)	858
FauNDI	CATATG	1 cut(s)	241
FbaI	TGATCA	3 cut(s)	184, 693, 904
FblI	GTMKAC	1 cut(s)	606
Fnu4HI	GCNGC	6 cut(s)	87, 998, 1013, 1024, 1469, 2043
FokI	GGATG	2 cut(s)	1649, 1979
Fsp4HI	GCNGC	6 cut(s)	87, 998, 1013, 1024, 1469, 2043
FspAI	RTGCGCAY	1 cut(s)	713
FspBI	CTAG	5 cut(s)	167, 371, 1278, 1301, 1887
FspI	TGCGCA	1 cut(s)	713
GlaI	GCGC	4 cut(s)	713, 765, 767, 1041
GluI	GCNGC	6 cut(s)	87, 998, 1013, 1024, 1469, 2043
GsuI	CTGGAG	1 cut(s)	843
HaeIII	GGCC	2 cut(s)	1668, 1734
HapII	CCGG	2 cut(s)	773, 1827
HgaI	GACGC	1 cut(s)	1460
HhaI	GCGC	4 cut(s)	714, 766, 768, 1042
Hin6I	GCGC	4 cut(s)	712, 764, 766, 1040
HinP1I	GCGC	4 cut(s)	712, 764, 766, 1040
HindIII	AAGCTT	2 cut(s)	1571, 1595
HinfI	GANTC	7 cut(s)	139, 245, 377, 569, 621, 1814, 1853
HpaII	CCGG	2 cut(s)	773, 1827
HphI	GGTGA	7 cut(s)	386, 481, 989, 1277, 1327, 1543, 1739
Hpy166II	GTNNAC	4 cut(s)	607, 665, 1337, 1480
Hpy188I	TCNGA	6 cut(s)	181, 435, 517, 1461, 1578, 1858
Hpy188III	TCNNGA	9 cut(s)	143, 252, 335, 860, 879, 890, 992, 1418, 1827
Hpy8I	GTNNAC	4 cut(s)	607, 665, 1337, 1480
Hpy99I	CGWCG	2 cut(s)	902, 1476
HpyAV	CCTTC	7 cut(s)	246, 366, 1534, 1573, 1658, 1679, 1775
HpyCH4III	ACNGT	3 cut(s)	733, 1394, 1531
HpyCH4IV	ACGT	4 cut(s)	543, 1295, 1647, 1796
HpyF10VI	GCNNNNNNNGC	4 cut(s)	55, 724, 1117, 2063
HpyF3I	CTNAG	9 cut(s)	178, 294, 639, 993, 1091, 1179, 1266, 1326, 1857
HpySE526I	ACGT	4 cut(s)	543, 1295, 1647, 1796
HspAI	GCGC	4 cut(s)	712, 764, 766, 1040
Kpn2I	TCCGGA	1 cut(s)	1826
Ksp22I	TGATCA	3 cut(s)	184, 693, 904
Kzo9I	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
LmnI	GCTCC	3 cut(s)	303, 1655, 1909
Lsp1109I	GCAGC	4 cut(s)	1009, 1010, 1480, 2054
LweI	GCATC	6 cut(s)	198, 543, 714, 790, 999, 1597
MaeI	CTAG	5 cut(s)	167, 371, 1278, 1301, 1887
MaeII	ACGT	4 cut(s)	543, 1295, 1647, 1796
MaeIII	GTNAC	6 cut(s)	21, 500, 733, 1074, 1190, 1296
MalI	GATC	8 cut(s)	186, 193, 473, 695, 874, 906, 1622, 1641
MbiI	CCGCTC	1 cut(s)	1423
MboI	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
MflI	RGATCY	1 cut(s)	872
MlsI	TGGCCA	1 cut(s)	1734
MluNI	TGGCCA	1 cut(s)	1734
MlyI	GAGTC	1 cut(s)	386
MmeI	TCCRAC	2 cut(s)	294, 533
Mox20I	TGGCCA	1 cut(s)	1734
Mph1103I	ATGCAT	1 cut(s)	729
MroI	TCCGGA	1 cut(s)	1826
MroXI	GAANNNNTTC	4 cut(s)	1449, 1572, 1583, 1668
MscI	TGGCCA	1 cut(s)	1734
MseI	TTAA	3 cut(s)	707, 1035, 1172
MslI	CAYNNNNRTG	1 cut(s)	1254
Msp20I	TGGCCA	1 cut(s)	1734
MspA1I	CMGCKG	1 cut(s)	1111
MspI	CCGG	2 cut(s)	773, 1827
MspR9I	CCNGG	5 cut(s)	402, 774, 1071, 1332, 1628
Mva1269I	GAATGC	1 cut(s)	1064
MvaI	CCWGG	4 cut(s)	402, 1071, 1332, 1628
MvnI	CGCG	2 cut(s)	766, 1042
MwoI	GCNNNNNNNGC	4 cut(s)	55, 724, 1117, 2063
NciI	CCSGG	1 cut(s)	774
NdeI	CATATG	1 cut(s)	241
NdeII	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
NlaIV	GGNNCC	3 cut(s)	90, 1521, 1905
NmeAIII	GCCGAG	1 cut(s)	1040
NmuCI	GTSAC	2 cut(s)	733, 1074
NsbI	TGCGCA	1 cut(s)	713
NsiI	ATGCAT	1 cut(s)	729
NspI	RCATGY	1 cut(s)	718
PaeI	GCATGC	1 cut(s)	718
PaeR7I	CTCGAG	1 cut(s)	252
PagI	TCATGA	1 cut(s)	1417
PasI	CCCWGGG	1 cut(s)	1070
PauI	GCGCGC	1 cut(s)	764
PceI	AGGCCT	1 cut(s)	1668
PctI	GAATGC	1 cut(s)	1064
PdmI	GAANNNNTTC	4 cut(s)	1449, 1572, 1583, 1668
PfeI	GAWTC	6 cut(s)	139, 245, 569, 621, 1814, 1853
PflMI	CCANNNNNTGG	1 cut(s)	329
PfoI	TCCNGGA	1 cut(s)	772
PkrI	GCNGC	6 cut(s)	88, 999, 1014, 1025, 1470, 2044
PleI	GAGTC	1 cut(s)	385
PpsI	GAGTC	1 cut(s)	385
PpuMI	RGGWCCY	2 cut(s)	62, 923
Psp5II	RGGWCCY	2 cut(s)	62, 923
Psp6I	CCWGG	4 cut(s)	400, 1069, 1330, 1626
PspGI	CCWGG	4 cut(s)	400, 1069, 1330, 1626
PspN4I	GGNNCC	3 cut(s)	90, 1521, 1905
PspPI	GGNCC	2 cut(s)	62, 923
PspPPI	RGGWCCY	2 cut(s)	62, 923
PstI	CTGCAG	2 cut(s)	70, 838
PstNI	CAGNNNCTG	1 cut(s)	737
PsuI	RGATCY	1 cut(s)	872
PteI	GCGCGC	1 cut(s)	764
PvuII	CAGCTG	1 cut(s)	1111
RsaI	GTAC	6 cut(s)	198, 576, 635, 664, 1276, 1282
RsaNI	GTAC	6 cut(s)	197, 575, 634, 663, 1275, 1281
RseI	CAYNNNNRTG	1 cut(s)	1254
SaqAI	TTAA	3 cut(s)	707, 1035, 1172
SatI	GCNGC	6 cut(s)	87, 998, 1013, 1024, 1469, 2043
Sau3AI	GATC	8 cut(s)	184, 191, 471, 693, 872, 904, 1620, 1639
Sau96I	GGNCC	2 cut(s)	62, 923
ScaI	AGTACT	2 cut(s)	198, 1282
SchI	GAGTC	1 cut(s)	386
ScrFI	CCNGG	5 cut(s)	402, 774, 1071, 1332, 1628
SfaNI	GCATC	6 cut(s)	198, 543, 714, 790, 999, 1597
SfcI	CTRYAG	4 cut(s)	66, 834, 1106, 1504
Sfr274I	CTCGAG	1 cut(s)	252
SinI	GGWCC	2 cut(s)	62, 923
SlaI	CTCGAG	1 cut(s)	252
SmiMI	CAYNNNNRTG	1 cut(s)	1254
SmlI	CTYRAG	3 cut(s)	252, 419, 1673
SmoI	CTYRAG	3 cut(s)	252, 419, 1673
SpeI	ACTAGT	1 cut(s)	1277
SphI	GCATGC	1 cut(s)	718
SseBI	AGGCCT	1 cut(s)	1668
SsiI	CCGC	7 cut(s)	86, 230, 851, 1012, 1423, 1562, 1882
SspMI	CTAG	5 cut(s)	167, 371, 1278, 1301, 1887
StuI	AGGCCT	1 cut(s)	1668
StyD4I	CCNGG	5 cut(s)	400, 772, 1069, 1330, 1626
TaaI	ACNGT	3 cut(s)	733, 1394, 1531
TaiI	ACGT	4 cut(s)	546, 1298, 1650, 1799
TaqI	TCGA	6 cut(s)	9, 218, 253, 474, 679, 1474
TatI	WGTACW	3 cut(s)	196, 662, 1280
TauI	GCSGC	2 cut(s)	89, 1015
TfiI	GAWTC	6 cut(s)	139, 245, 569, 621, 1814, 1853
Tru1I	TTAA	3 cut(s)	707, 1035, 1172
Tru9I	TTAA	3 cut(s)	707, 1035, 1172
TscAI	CASTG	1 cut(s)	742
TseFI	GTSAC	2 cut(s)	733, 1074
TseI	GCWGC	4 cut(s)	997, 1023, 1468, 2042
Tsp45I	GTSAC	2 cut(s)	733, 1074
TspDTI	ATGAA	9 cut(s)	218, 228, 837, 1406, 1576, 1677, 1709, 1770, 2006
TspGWI	ACGGA	1 cut(s)	580
TspRI	CASTG	1 cut(s)	742
Van91I	CCANNNNNTGG	1 cut(s)	329
VpaK11BI	GGWCC	2 cut(s)	62, 923
XapI	RAATTY	3 cut(s)	16, 549, 1208
XceI	RCATGY	1 cut(s)	718
XhoI	CTCGAG	1 cut(s)	252
XmiI	GTMKAC	1 cut(s)	606
XmnI	GAANNNNTTC	4 cut(s)	1449, 1572, 1583, 1668
XspI	CTAG	5 cut(s)	167, 371, 1278, 1301, 1887
ZrmI	AGTACT	2 cut(s)	198, 1282
Zsp2I	ATGCAT	1 cut(s)	729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.