Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0017310

Physical Location & Seq

Genomic Coordinates Forward (+)

30641174 .. 30643261

Gene Structure 2088 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G024700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGTTGCTACGGACTTCGATTTGAATTTGTTACCATTACCTGAAGAAGAAGATAAGAAGACTTTGCAAGGTCCTGCAGAACAATATTCCACGGCGGCACCAAACCTTGAACAAATGCTATTCGGTGTAGATATAACACACAGAGAGAACCAAGAGAGACATAAGCGAATGAGACTAGAACAATGCTCAGATGATCACAGATCAGTACTAATGCAGATGCAAACATCGATATCTCAACTGCCTCCTTCATATGATTCGTCTCGAGTTCAACCAAGACATTTTGTCAGCTCTTATGACACATCTAAGCTCCCCTCTGGGTGGTTGGATTGCCCATCGTTTGGTCAAGAGTTATATTGCATGATACCTTCTAAAGTGCCACTAGGTGAGTCCTACAATCATTATGTTCCTCCTGGTAAAAGATACTCACTCAAGCAAGTCATTCAGAAACAGAGACACCTGAAAAGAAAACTAGGTTTGGTGATCGATTTGACCAACACATTCAAATCTCGTTACTATCCAACCTCTGATTTGGAGAAAGAGGGTATTAGGCATGTCAAAATTCCATGCAAGGGGCGAGATTCTGTACCCGACAACCTTTCCGTGAATAGGTTTGTATACGAAGTCATACGATTCAAACAGATGTACCCTAAGAAGTATATCCTTGTGCATTGTACACATGGACACAATCGAACAGGGTATATGATCATACATTACTTAATGCGCATGCTACCGATGCATACAGTCACTGAAGCAATACAAACATTTGCTAAAGCGCGCCCTCCGGGAATATATAAACCCGACTACATTGATGCTCTATACTCATTCTACCATGAAAGGAAGCCTGCAGAAATTGTTTGCCCGCCTACTCCAGATTGGAAGAGGTCTTCAGAATTTGTTCCAGACGACGACGACGATCATCAAGGTTTAGCGGGTCCTTTGCATGAGGATATGGATACAGATATAATGACAAATGATGATATCTTGGGTGATGAGATACCTCCTGAGCAGCAAGAGGAGATGCGGCTGTTCTGCTGCCAAAGTCTTAATACGCGTTGTAAGAATATAAGCTCGGCATTCCCAGGGTCACACCCAGTTTCTCTTAGCAGAGAAAAGCTACAGCTGTTGAAGCAGAGGTATTATTATGCTACATGGAAAGCTGATGGAACACGATACATGATGTTAATTACTAAGGACGGGTGTTACTTGATTGATAGAAAATTCAATTTTAGGAGAGTTCAAATGAGGTTTCCTTGCAAACACACAAATGGTTTAGCTGAAAATGGTACTAGTACTCACCACTATACGTTACTAGACGGGGAGATGGTGATTGATACTGAGCCAGGTTCACAGAAGAAGAAGAGAAGATACCTAATTTATGACATGATGGCAATCAACAACCGTCCTGTGGTAAAATTGCCTTTTCATGAGCGGTGGAAGATGATTGAGGAAGAAGTAATTCAGCCTCGGAATGAGCAGCGTCGAGTTTACCAAAGTAGGAATAATCCCAACTACAGATATGACTTGGAACCATTCACGGTGAGGAGGAAGGGCTTTTGGTTGCTCTCTACGGTTGAAAAGCTTCTGAAGGACTTCATTCCAAAGCTTTCACATGATGCAGATGGTGTTATCTTTCAGGGTTGGGATGATCCATACGTTCAGGGAGCTGATGAAGGCCTTCTAAAGTGGAAATATCCTGCTATGAACTCTATTGATTTTCTATTTGAGGTAAGTGGTGATGGCCGGCAACAGCTTTTTCTGTATGAACAAGGAAAGAAGAAACTAATGGAAGGATATAGGATTACGTTTAGGGATAGTGTGGAATCTTTTTATTCCGGAAAAATAATAGAGTGTTCTTGGGATTCTGAGACAAAAGAATGGGTCTATATGCGGACTAGGACTGATAAATCGGCTCCAAATGACATCAATACCCACGACAAGATAATGCAAAGCATAAAGGACAATATCACAGAGGACGTCTTGCTAAATGAGATATACAAGACCATTCGTCTGCCTATATATGTTCATAGAATACAGAAAGATAGCAAAGCAACAGAGAAACATGCAAGTTCAGCAAGGACTGCAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004484 GO:0004651 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008192 GO:0009452 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016071 GO:0016311 GO:0016462 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0019222 GO:0034641 GO:0036260 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048518 GO:0050355 GO:0050789 GO:0060255 GO:0065007 GO:0070568 GO:0071704 GO:0090304 GO:0098501 GO:0098507 GO:0098518 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

695

Amino Acids

81.54

Weight (kDa)

8.46

Isoelectric Point (pI)

50.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DSPc	PF00782	151 - 276	7.9e-11	Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme	PF01331	363 - 563	4.5e-72	mRNA capping enzyme, catalytic domain
mRNA_cap_C	PF03919	601 - 661	1.8e-18	mRNA capping enzyme, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017310)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g25120
rosa_chinensis	RchiOBHm_Chr7g0215321
rosa_laevigata	RLG00000002670
rosa_multiflora	Rmu_co8409009.1_g000001 Rmu_sc0021837.1_g000001
rosa_roxburghii	Rroxscaffold_3G00244280
rosa_rugosa	Rorug07G0152100
rosa_samantha	Rh7AG288900 Rh7BG280900 Rh7CG308700 Rh7DG292500
rosa_wichuraiana	Rw7G024700 Rw7G028500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1977
Acc16I	TGCGCA	1 cut(s)	722
AccB1I	GGYRCC	1 cut(s)	97
AccB7I	CCANNNNNTGG	1 cut(s)	338
AccBSI	CCGCTC	1 cut(s)	1429
AccI	GTMKAC	1 cut(s)	615
AccII	CGCG	2 cut(s)	775, 1051
AccIII	TCCGGA	1 cut(s)	1832
AciI	CCGC	6 cut(s)	95, 860, 929, 1021, 1429, 1888
AclWI	GGATC	1 cut(s)	1640
AcoI	YGGCCR	1 cut(s)	1738
AcsI	RAATTY	4 cut(s)	25, 558, 890, 1217
AcuI	CTGAAG	4 cut(s)	63, 768, 870, 1604
AcyI	GRCGYC	1 cut(s)	1974
AdeI	CACNNNGTG	1 cut(s)	383
AfaI	GTAC	6 cut(s)	207, 585, 644, 673, 1285, 1291
AfiI	CCNNNNNNNGG	5 cut(s)	318, 338, 569, 606, 1405
AflIII	ACRYGT	1 cut(s)	1049
AgsI	TTSAA	9 cut(s)	25, 110, 269, 502, 634, 1126, 1222, 1238, 1574
AhdI	GACNNNNNGTC	2 cut(s)	281, 2004
AhlI	ACTAGT	1 cut(s)	1286
AjnI	CCWGG	3 cut(s)	409, 1078, 1339
Alw26I	GTCTC	5 cut(s)	151, 166, 264, 445, 1859
AlwI	GGATC	1 cut(s)	1640
AlwNI	CAGNNNCTG	1 cut(s)	746
Ama87I	CYCGRG	1 cut(s)	261
Aor13HI	TCCGGA	1 cut(s)	1832
AoxI	GGCC	2 cut(s)	1672, 1738
ApeKI	GCWGC	3 cut(s)	1006, 1032, 1474
ApoI	RAATTY	4 cut(s)	25, 558, 890, 1217
Asp700I	GAANNNNTTC	5 cut(s)	894, 1455, 1578, 1589, 1674
AspLEI	GCGC	3 cut(s)	723, 775, 777
AspS9I	GGNCC	2 cut(s)	71, 932
AsuC2I	CCSGG	1 cut(s)	783
AsuHPI	GGTGA	7 cut(s)	395, 490, 998, 1286, 1336, 1549, 1745
AvaI	CYCGRG	1 cut(s)	261
AvaII	GGWCC	2 cut(s)	71, 932
BaeI	ACNNNNGTAYC	2 cut(s)	626, 659
BanI	GGYRCC	1 cut(s)	97
BarI	GAAGNNNNNNTAC	2 cut(s)	1349, 1381
BbsI	GAAGAC	2 cut(s)	65, 876
BbvI	GCAGC	3 cut(s)	1018, 1019, 1486
BccI	CCATC	6 cut(s)	340, 1154, 1315, 1378, 1613, 1730
BceAI	ACGGC	1 cut(s)	108
BciT130I	CCWGG	3 cut(s)	411, 1080, 1341
BciVI	GTATCC	1 cut(s)	946
BclI	TGATCA	2 cut(s)	193, 702
BcnI	CCSGG	1 cut(s)	783
BcoDI	GTCTC	5 cut(s)	151, 166, 264, 445, 1859
BcuI	ACTAGT	1 cut(s)	1286
BfaI	CTAG	6 cut(s)	176, 380, 470, 1287, 1310, 1893
BfmI	CTRYAG	4 cut(s)	75, 843, 1115, 1510
BfuI	GTATCC	1 cut(s)	946
BisI	GCNGC	5 cut(s)	96, 1007, 1022, 1033, 1475
BlsI	GCNGC	5 cut(s)	97, 1008, 1023, 1034, 1476
BmcAI	AGTACT	2 cut(s)	207, 1291
Bme1390I	CCNGG	4 cut(s)	411, 783, 1080, 1341
Bme18I	GGWCC	2 cut(s)	71, 932
BmeRI	GACNNNNNGTC	2 cut(s)	281, 2004
BmeT110I	CYCGRG	1 cut(s)	261
BmgT120I	GGNCC	2 cut(s)	71, 932
BmiI	GGNNCC	4 cut(s)	99, 933, 1527, 1911
BmrFI	CCNGG	4 cut(s)	411, 783, 1080, 1341
BmrI	ACTGGG	1 cut(s)	1085
BmsI	GCATC	5 cut(s)	207, 723, 799, 1008, 1603
BmuI	ACTGGG	1 cut(s)	1085
BpiI	GAAGAC	2 cut(s)	65, 876
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	1 cut(s)	1002
BpuEI	CTTGAG	1 cut(s)	413
BpuMI	CCSGG	1 cut(s)	783
Bsa29I	ATCGAT	2 cut(s)	227, 483
BsaBI	GATNNNNATC	1 cut(s)	1388
BsaHI	GRCGYC	1 cut(s)	1974
BsaJI	CCNNGG	4 cut(s)	90, 1078, 1079, 1463
BsaWI	WCCGGW	1 cut(s)	1832
Bsc4I	CCNNNNNNNGG	5 cut(s)	318, 338, 569, 606, 1405
Bse118I	RCCGGY	1 cut(s)	1740
Bse1I	ACTGG	1 cut(s)	1091
Bse8I	GATNNNNATC	1 cut(s)	1388
BseAI	TCCGGA	1 cut(s)	1832
BseBI	CCWGG	3 cut(s)	411, 1080, 1341
BseCI	ATCGAT	2 cut(s)	227, 483
BseDI	CCNNGG	4 cut(s)	90, 1078, 1079, 1463
BseGI	GGATG	1 cut(s)	1648
BseJI	GATNNNNATC	1 cut(s)	1388
BseLI	CCNNNNNNNGG	5 cut(s)	318, 338, 569, 606, 1405
BseMII	CTCAG	4 cut(s)	201, 993, 1326, 1854
BseNI	ACTGG	1 cut(s)	1091
BsePI	GCGCGC	1 cut(s)	773
BseRI	GAGGAG	2 cut(s)	1028, 1555
BseXI	GCAGC	3 cut(s)	1018, 1019, 1486
Bsh1236I	CGCG	2 cut(s)	775, 1051
BshFI	GGCC	2 cut(s)	1674, 1740
BshNI	GGYRCC	1 cut(s)	97
BshVI	ATCGAT	2 cut(s)	227, 483
BsiHKCI	CYCGRG	1 cut(s)	261
BsiSI	CCGG	3 cut(s)	782, 1741, 1833
BslI	CCNNNNNNNGG	5 cut(s)	318, 338, 569, 606, 1405
BsmAI	GTCTC	5 cut(s)	151, 166, 264, 445, 1859
BsmBI	CGTCTC	1 cut(s)	264
BsmI	GAATGC	1 cut(s)	1073
BsnI	GGCC	2 cut(s)	1674, 1740
BsoBI	CYCGRG	1 cut(s)	261
Bsp13I	TCCGGA	1 cut(s)	1832
Bsp1407I	TGTACA	1 cut(s)	671
Bsp143I	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
BspACI	CCGC	6 cut(s)	95, 860, 929, 1021, 1429, 1888
BspANI	GGCC	2 cut(s)	1674, 1740
BspCNI	CTCAG	4 cut(s)	200, 994, 1327, 1855
BspDI	ATCGAT	2 cut(s)	227, 483
BspEI	TCCGGA	1 cut(s)	1832
BspFNI	CGCG	2 cut(s)	775, 1051
BspHI	TCATGA	1 cut(s)	1423
BspLI	GGNNCC	4 cut(s)	99, 933, 1527, 1911
BspMAI	CTGCAG	2 cut(s)	79, 847
BspPI	GGATC	1 cut(s)	1640
BspT107I	GGYRCC	1 cut(s)	97
BsrBI	CCGCTC	1 cut(s)	1429
BsrFI	RCCGGY	1 cut(s)	1740
BsrGI	TGTACA	1 cut(s)	671
BsrI	ACTGG	1 cut(s)	1091
BssAI	RCCGGY	1 cut(s)	1740
BssECI	CCNNGG	4 cut(s)	90, 1078, 1079, 1463
BssHII	GCGCGC	1 cut(s)	773
BssMI	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
BssNAI	GTATAC	1 cut(s)	616
BssNI	GRCGYC	1 cut(s)	1974
Bst1107I	GTATAC	1 cut(s)	616
Bst2UI	CCWGG	3 cut(s)	411, 1080, 1341
Bst4CI	ACNGT	4 cut(s)	742, 1400, 1537, 1570
Bst6I	CTCTTC	2 cut(s)	872, 1352
BstACI	GRCGYC	1 cut(s)	1974
BstAPI	GCANNNNNTGC	1 cut(s)	2078
BstAUI	TGTACA	1 cut(s)	671
BstC8I	GCNNGC	5 cut(s)	725, 775, 843, 860, 1742
BstDEI	CTNAG	8 cut(s)	187, 303, 648, 1002, 1100, 1188, 1335, 1863
BstDSI	CCRYGG	1 cut(s)	90
BstF5I	GGATG	1 cut(s)	1648
BstFNI	CGCG	2 cut(s)	775, 1051
BstHHI	GCGC	3 cut(s)	723, 775, 777
BstKTI	GATC	6 cut(s)	196, 203, 483, 705, 916, 1648
BstMAI	GTCTC	5 cut(s)	151, 166, 264, 445, 1859
BstMBI	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
BstMWI	GCNNNNNNNGC	4 cut(s)	733, 1126, 2069, 2078
BstNI	CCWGG	3 cut(s)	411, 1080, 1341
BstNSI	RCATGY	3 cut(s)	554, 727, 2063
BstSCI	CCNGG	4 cut(s)	409, 781, 1078, 1339
BstSFI	CTRYAG	4 cut(s)	75, 843, 1115, 1510
BstUI	CGCG	2 cut(s)	775, 1051
BstV1I	GCAGC	3 cut(s)	1018, 1019, 1486
BstV2I	GAAGAC	2 cut(s)	65, 876
BstZ17I	GTATAC	1 cut(s)	616
Bsu15I	ATCGAT	2 cut(s)	227, 483
BsuI	GTATCC	1 cut(s)	946
BsuRI	GGCC	2 cut(s)	1674, 1740
BsuTUI	ATCGAT	2 cut(s)	227, 483
BtgI	CCRYGG	1 cut(s)	90
BtsCI	GGATG	1 cut(s)	1648
BtsIMutI	CAGTG	1 cut(s)	744
Cac8I	GCNNGC	5 cut(s)	725, 775, 843, 860, 1742
CaiI	CAGNNNCTG	1 cut(s)	746
CciI	TCATGA	1 cut(s)	1423
CfoI	GCGC	3 cut(s)	723, 775, 777
Cfr10I	RCCGGY	1 cut(s)	1740
Cfr13I	GGNCC	2 cut(s)	71, 932
ClaI	ATCGAT	2 cut(s)	227, 483
CseI	GACGC	1 cut(s)	1466
Csp6I	GTAC	6 cut(s)	206, 584, 643, 672, 1284, 1290
CviQI	GTAC	6 cut(s)	206, 584, 643, 672, 1284, 1290
DdeI	CTNAG	8 cut(s)	187, 303, 648, 1002, 1100, 1188, 1335, 1863
DpnI	GATC	6 cut(s)	195, 202, 482, 704, 915, 1647
DpnII	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
DraIII	CACNNNGTG	1 cut(s)	383
DriI	GACNNNNNGTC	2 cut(s)	281, 2004
EaeI	YGGCCR	1 cut(s)	1738
Eam1104I	CTCTTC	2 cut(s)	872, 1352
Eam1105I	GACNNNNNGTC	2 cut(s)	281, 2004
EarI	CTCTTC	2 cut(s)	872, 1352
Eco147I	AGGCCT	1 cut(s)	1674
Eco32I	GATATC	2 cut(s)	231, 979
Eco47I	GGWCC	2 cut(s)	71, 932
Eco57I	CTGAAG	4 cut(s)	63, 768, 870, 1604
Eco88I	CYCGRG	1 cut(s)	261
EcoO109I	RGGNCCY	2 cut(s)	71, 932
EcoRII	CCWGG	3 cut(s)	409, 1078, 1339
EcoRV	GATATC	2 cut(s)	231, 979
EcoT22I	ATGCAT	1 cut(s)	738
Esp3I	CGTCTC	1 cut(s)	264
FauI	CCCGC	2 cut(s)	867, 922
FauNDI	CATATG	1 cut(s)	250
FbaI	TGATCA	2 cut(s)	193, 702
FblI	GTMKAC	1 cut(s)	615
Fnu4HI	GCNGC	5 cut(s)	96, 1007, 1022, 1033, 1475
FokI	GGATG	1 cut(s)	1655
Fsp4HI	GCNGC	5 cut(s)	96, 1007, 1022, 1033, 1475
FspAI	RTGCGCAY	1 cut(s)	722
FspBI	CTAG	6 cut(s)	176, 380, 470, 1287, 1310, 1893
FspI	TGCGCA	1 cut(s)	722
GlaI	GCGC	3 cut(s)	722, 774, 776
GluI	GCNGC	5 cut(s)	96, 1007, 1022, 1033, 1475
GsuI	CTGGAG	1 cut(s)	852
HaeIII	GGCC	2 cut(s)	1674, 1740
HapII	CCGG	3 cut(s)	782, 1741, 1833
HgaI	GACGC	1 cut(s)	1466
HhaI	GCGC	3 cut(s)	723, 775, 777
Hin1I	GRCGYC	1 cut(s)	1974
Hin6I	GCGC	3 cut(s)	721, 773, 775
HinP1I	GCGC	3 cut(s)	721, 773, 775
HindIII	AAGCTT	2 cut(s)	1577, 1601
HinfI	GANTC	6 cut(s)	254, 386, 578, 630, 1820, 1859
HpaII	CCGG	3 cut(s)	782, 1741, 1833
HphI	GGTGA	7 cut(s)	395, 490, 998, 1286, 1336, 1549, 1745
Hpy166II	GTNNAC	4 cut(s)	616, 674, 1346, 1486
Hpy188I	TCNGA	7 cut(s)	190, 444, 526, 889, 1467, 1584, 1864
Hpy188III	TCNNGA	7 cut(s)	261, 344, 869, 899, 1001, 1424, 1833
Hpy8I	GTNNAC	4 cut(s)	616, 674, 1346, 1486
Hpy99I	CGWCG	4 cut(s)	908, 911, 914, 1482
HpyAV	CCTTC	7 cut(s)	255, 375, 1540, 1579, 1664, 1685, 1781
HpyCH4III	ACNGT	4 cut(s)	742, 1400, 1537, 1570
HpyCH4IV	ACGT	4 cut(s)	1304, 1653, 1802, 1974
HpyF10VI	GCNNNNNNNGC	4 cut(s)	733, 1126, 2069, 2078
HpyF3I	CTNAG	8 cut(s)	187, 303, 648, 1002, 1100, 1188, 1335, 1863
HpySE526I	ACGT	4 cut(s)	1304, 1653, 1802, 1974
Hsp92I	GRCGYC	1 cut(s)	1974
HspAI	GCGC	3 cut(s)	721, 773, 775
Kpn2I	TCCGGA	1 cut(s)	1832
KroI	GCCGGC	1 cut(s)	1740
KroNI	GCCGGC	1 cut(s)	1742
Ksp22I	TGATCA	2 cut(s)	193, 702
Kzo9I	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
LmnI	GCTCC	3 cut(s)	312, 1661, 1915
Lsp1109I	GCAGC	3 cut(s)	1018, 1019, 1486
LweI	GCATC	5 cut(s)	207, 723, 799, 1008, 1603
MaeI	CTAG	6 cut(s)	176, 380, 470, 1287, 1310, 1893
MaeII	ACGT	4 cut(s)	1304, 1653, 1802, 1974
MaeIII	GTNAC	6 cut(s)	30, 509, 742, 1083, 1199, 1305
MalI	GATC	6 cut(s)	195, 202, 482, 704, 915, 1647
MbiI	CCGCTC	1 cut(s)	1429
MboI	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
MluI	ACGCGT	1 cut(s)	1049
MlyI	GAGTC	1 cut(s)	395
MmeI	TCCRAC	2 cut(s)	303, 542
Mph1103I	ATGCAT	1 cut(s)	738
MroI	TCCGGA	1 cut(s)	1832
MroNI	GCCGGC	1 cut(s)	1740
MroXI	GAANNNNTTC	5 cut(s)	894, 1455, 1578, 1589, 1674
MseI	TTAA	3 cut(s)	716, 1044, 1181
MslI	CAYNNNNRTG	1 cut(s)	1263
MspA1I	CMGCKG	1 cut(s)	1120
MspI	CCGG	3 cut(s)	782, 1741, 1833
MspR9I	CCNGG	4 cut(s)	411, 783, 1080, 1341
Mva1269I	GAATGC	1 cut(s)	1073
MvaI	CCWGG	3 cut(s)	411, 1080, 1341
MvnI	CGCG	2 cut(s)	775, 1051
MwoI	GCNNNNNNNGC	4 cut(s)	733, 1126, 2069, 2078
NaeI	GCCGGC	1 cut(s)	1742
NciI	CCSGG	1 cut(s)	783
NdeI	CATATG	1 cut(s)	250
NdeII	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
NgoMIV	GCCGGC	1 cut(s)	1740
NlaIV	GGNNCC	4 cut(s)	99, 933, 1527, 1911
NmeAIII	GCCGAG	1 cut(s)	1049
NmuCI	GTSAC	2 cut(s)	742, 1083
NsbI	TGCGCA	1 cut(s)	722
NsiI	ATGCAT	1 cut(s)	738
NspI	RCATGY	3 cut(s)	554, 727, 2063
PaeI	GCATGC	1 cut(s)	727
PaeR7I	CTCGAG	1 cut(s)	261
PagI	TCATGA	1 cut(s)	1423
PasI	CCCWGGG	1 cut(s)	1079
PauI	GCGCGC	1 cut(s)	773
PceI	AGGCCT	1 cut(s)	1674
PcsI	WCGNNNNNNNCGW	1 cut(s)	909
PctI	GAATGC	1 cut(s)	1073
PdiI	GCCGGC	1 cut(s)	1742
PdmI	GAANNNNTTC	5 cut(s)	894, 1455, 1578, 1589, 1674
PfeI	GAWTC	5 cut(s)	254, 578, 630, 1820, 1859
PflMI	CCANNNNNTGG	1 cut(s)	338
PfoI	TCCNGGA	1 cut(s)	781
PkrI	GCNGC	5 cut(s)	97, 1008, 1023, 1034, 1476
PleI	GAGTC	1 cut(s)	394
PpsI	GAGTC	1 cut(s)	394
PpuMI	RGGWCCY	2 cut(s)	71, 932
Psp5II	RGGWCCY	2 cut(s)	71, 932
Psp6I	CCWGG	3 cut(s)	409, 1078, 1339
PspGI	CCWGG	3 cut(s)	409, 1078, 1339
PspN4I	GGNNCC	4 cut(s)	99, 933, 1527, 1911
PspPI	GGNCC	2 cut(s)	71, 932
PspPPI	RGGWCCY	2 cut(s)	71, 932
PstI	CTGCAG	2 cut(s)	79, 847
PstNI	CAGNNNCTG	1 cut(s)	746
PteI	GCGCGC	1 cut(s)	773
PvuII	CAGCTG	1 cut(s)	1120
RsaI	GTAC	6 cut(s)	207, 585, 644, 673, 1285, 1291
RsaNI	GTAC	6 cut(s)	206, 584, 643, 672, 1284, 1290
RseI	CAYNNNNRTG	1 cut(s)	1263
SaqAI	TTAA	3 cut(s)	716, 1044, 1181
SatI	GCNGC	5 cut(s)	96, 1007, 1022, 1033, 1475
Sau3AI	GATC	6 cut(s)	193, 200, 480, 702, 913, 1645
Sau96I	GGNCC	2 cut(s)	71, 932
ScaI	AGTACT	2 cut(s)	207, 1291
SchI	GAGTC	1 cut(s)	395
ScrFI	CCNGG	4 cut(s)	411, 783, 1080, 1341
SfaNI	GCATC	5 cut(s)	207, 723, 799, 1008, 1603
SfcI	CTRYAG	4 cut(s)	75, 843, 1115, 1510
Sfr274I	CTCGAG	1 cut(s)	261
SinI	GGWCC	2 cut(s)	71, 932
SlaI	CTCGAG	1 cut(s)	261
SmiMI	CAYNNNNRTG	1 cut(s)	1263
SmlI	CTYRAG	2 cut(s)	261, 428
SmoI	CTYRAG	2 cut(s)	261, 428
SpeI	ACTAGT	1 cut(s)	1286
SphI	GCATGC	1 cut(s)	727
SseBI	AGGCCT	1 cut(s)	1674
SsiI	CCGC	6 cut(s)	95, 860, 929, 1021, 1429, 1888
SspI	AATATT	1 cut(s)	86
SspMI	CTAG	6 cut(s)	176, 380, 470, 1287, 1310, 1893
StuI	AGGCCT	1 cut(s)	1674
StyD4I	CCNGG	4 cut(s)	409, 781, 1078, 1339
TaaI	ACNGT	4 cut(s)	742, 1400, 1537, 1570
TaiI	ACGT	4 cut(s)	1307, 1656, 1805, 1977
TaqI	TCGA	6 cut(s)	18, 227, 262, 483, 688, 1480
TatI	WGTACW	3 cut(s)	205, 671, 1289
TauI	GCSGC	2 cut(s)	98, 1024
TfiI	GAWTC	5 cut(s)	254, 578, 630, 1820, 1859
Tru1I	TTAA	3 cut(s)	716, 1044, 1181
Tru9I	TTAA	3 cut(s)	716, 1044, 1181
TscAI	CASTG	1 cut(s)	751
TseFI	GTSAC	2 cut(s)	742, 1083
TseI	GCWGC	3 cut(s)	1006, 1032, 1474
Tsp45I	GTSAC	2 cut(s)	742, 1083
TspDTI	ATGAA	8 cut(s)	237, 846, 1412, 1582, 1683, 1715, 1776, 2012
TspGWI	ACGGA	2 cut(s)	26, 589
TspRI	CASTG	1 cut(s)	751
Van91I	CCANNNNNTGG	1 cut(s)	338
VpaK11BI	GGWCC	2 cut(s)	71, 932
XapI	RAATTY	4 cut(s)	25, 558, 890, 1217
XceI	RCATGY	3 cut(s)	554, 727, 2063
XhoI	CTCGAG	1 cut(s)	261
XmiI	GTMKAC	1 cut(s)	615
XmnI	GAANNNNTTC	5 cut(s)	894, 1455, 1578, 1589, 1674
XspI	CTAG	6 cut(s)	176, 380, 470, 1287, 1310, 1893
ZraI	GACGTC	1 cut(s)	1975
ZrmI	AGTACT	2 cut(s)	207, 1291
Zsp2I	ATGCAT	1 cut(s)	738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.