Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0015103

Physical Location & Seq

Genomic Coordinates Forward (+)

18795079 .. 18802496

Gene Structure 7418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3291 bp

ATGGCGAAGAACGACGCGTCGTTGCTGGAATCGGTTGACGAGTTCCTGAAGCGGTGTGAGCAATCGGGCGACGCCGCGTACGGCGCTCTGAGATCAGTGCTGGAGCGTCTCGAGGATCCGAAAACCCGAAGTCGTGCTCGGATCTTCCTCGCCGACCTCCAGAAACGCTTCCCTACCAAGGACGACTGCGACCGCTGCTTCCGCACTTACCATTTCCAGATTGAGGACATTTTCTTTGATCAGTATCAAGGTTACCAGGGAAGGAAGAAATTGACAATGATGGTTATCCCGAGCATTTTTGTTCCAGAAGATTGGTCCTTCACTTTTTTTGAAGGACTAAATAGACATCCGGACTCTATCTTTAAGGACAAGACACTTGCTGAGCTTGGTTGTGGAAATGGTTGGATATCCATTGCCATTGCTGAGAAGTGGTCGCCGTCAAAGGTTTATGGCCTTGATATCAATCCTAGAGCAGTCAAGATGTCATGGATAAATTTGTATCTTAATGCTTTGGACGAGAAAGGTCAGCCCATCTATGATGCGGAGAAAAAGACCTTGCTGGACAGGGTTGAGTTTCATGAATCAGATCTCCTATCATATTGCAGAGACAATGATATTCAACTAGAACGAATTGTTGGTTGCATCCCTCAGATTCTTAACCCAAATCCAGATGCAATGTCTAAGATGATAACTGAGAATGCAAGTGAGGAATTTCTACATTCATTGAGCAATTATTGCGCGCTTCAGGGTTTTCTTGAGGATCAATTTGGCTTAGGTCTAATTGCTAGGGCCGTGGAGGAAGGAATAACTGTCATTAAACCTATGGGGATAATGATCTTCAACATGGGGGGGCGTCCTGGACAAGCTGTTTGTAAACACTTGTTTGAACGCCGTGGCTTTCAGGTTAACAAGCTTTGGCAGACTAAAATTCTACAGGCTGCAGACACAGATATATCAGCATTAGTTGAAATAGAAAAGAACAGTCCACACCGTTTTGAGTTCTTCATGGGACTTTCTGGAGATCAGCCTATTTGTGCTCGAACTGCATGGGCATATGGAAATGCCGGTGGTCGAATCTCGCATGCCTTATCAGTTTACAGCTGTCAACTTCGCCAACCAAATCAGGTCAAGACAATATTTGAGTTTCTTAAGAATGGCTTCCACGACATCAGCAGTTCTTTAGATTTATCGTTTGATGATGATTCTGTGGCTGATGAGAAGATTCCCTTCCTAGCTTATCTGTCCAGTGTTCTGAAAGACAGTTCTTTCTGCAAGTATGAGCCACCAGCAGGAAGCAAACATTTTCGTAACCTCATTGCTGGATTTTTGAAAACATATCACCGTGTTCCACTCAATACTGATAATGTTGTTGTCTTTCCTTCAAGGGCTGTAGCGATAGAAAATGCCCTTCGGTTGTTCTCACCTCGTCTTGCAATTGTTGATGAACATTTGACGCGCCACCTTCCAAGGAACTGGTTAACGTCTTTAGCAGTTAAGTGTGCAGGAACTGATAATCCTGCAGAGGATTCACTTACAGTTATTGAAGCGCCTCGACAGTCTGATTTGATGATAGAGCTTATAAGGAAGTTGAAGCCGCAGGTGGTGGTTACTGGGATAGCCGATTATGAGTCTGTTACTAGTTCAGCCTTTGTACACCTTTTAGATGTTACAAGAGAAATTGGATCTCGTCTTTTCTTAGACATATCTGATCACTTTGAGCTATCCAGCCTTCCGAGTTCCAATGGAGTCCTCAAATATATAGGAGGGACTGTTCTGCCATCCCATGCAGCAATTATATGTGGCTTAGTGAAAAACAAGGTTTATTCAGATCTCGAAGTAGCTTTTGTAATTTCAGAGGAGGAGAATATTTTCAAGGCCTTGTCGAAGACTGTTGAACTACTAGAAGGGAATACAGCACCAATTAGTCAATGTTATTACGGTTGTCTTTTTCATGAACTTTTATCTTTTCAACTTGCTGACAGACACCCACCTCCACAGAGGGAATGCACATCAGTTAAATCAGCAGAGATGATTGGTTTCGCTAGCTCAGCAGACTCTGTTCTTAATAATGCCGAGTTGGCAATTAATGAGGCTGGGAACTCTTCCCTGATTCATATGGACGTGGATCAAACCTTCTTACATGTTCCATCACCTGTCAATGCTGCAATTTTTGAAAGCTTTGCCAGACAGAACATAGCTGAGTCAGAAATAGATGTCACCAGCAGCATTAAGGAATTCATAAAGAGCAATTATGGTTACCCACTTGGTAGCAACACCGAATTTATATATGCCGACAGCTCACTAGCTCTATTTAACAAGTTGGTTCTTTGTTGCATACAAGAAGGGGGGACATTGTGCTTTCCTTCGGGCTCAAATGGAAACTATGTCTCCGCTGCAAAATTTTTAAAAGCAAACATTGTAAATATACCTACAAAGATCGAAGAAGGCTTTAAACTGACAGACAAGGGTCTCTCTGGAGTCCTAGAGACTCTGCATAAACCATGGGTCTACATATCTGGACCAACAGTTAACCCAACTGGTGCGCTATACAGCAACAAAGAGATTGAAAATTTACTGTCTACCTGTGCCAAATTTGGCGCCAGGGTTGTGATTGACACTTCATTCTCGGGTTTGGAATTTGACTTGGAGGGTTGGGGTGGCTGGAATCTGGTGGACAGTTTGTTGAAGTTATATTCTTCTAGCAAGCCATCCTTTTGTGTCTCTCTGCTTGGGGGATTGTCTTTGAAGATGCTGAGTGGGGGTCTCAAATTTGGGTTTCTGGTTCTGAACCAGTCTGCTATGGTGGAAACATTTTATAGCTTTCCAGGATTAAGCAAACCTCATAACACTGTTAAATATGCTGTGAAGAAGCTACTGGGTCTGAGAGAGCAGAAATCAGGAGATCTCTGGGATGCCATTGCTGAACAGATAAGAAATTTGAAGAGTCGATCGAAGTGCTTGAAGGAGACGCTGGAAAAGAGTGGATGGGATGTGCTTGAATCCTATGGTGGTGTTTCCATGGTGGCCAAGCCCTCATCTTATTTGAACAAGACTGTAAAGTTCAAGCAATATAAAGATGGAGGCAGCACTGAAGATGGAACAGTTCATGAAGTTAAGCTTGATGACTCTAATATCAGGGAGGTTGTTCACAAGGCTACGGGATTATGCATCAATAGCGGCTCCTGGACTGGAATTCCTGGCTATTGTCGTTTCACAATTGCTCTTGAAGAAAGTGAATTTGAGCGGGCATTGGATTGCATTGTTCAATTTAAGAAGACCATCAGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001887 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006732 GO:0006790 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009987 GO:0016740 GO:0016741 GO:0017144 GO:0032259 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046500 GO:0051186 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00450 map00450

Pfam Domains

Protein Families

Aminotran_1_2 MTS Methyltransf_31

Protein Analysis

1097

Amino Acids

121.9

Weight (kDa)

5.75

Isoelectric Point (pI)

38.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_1_2	PF00155	739 - 1086	1.5e-16	Aminotransferase class I and II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0015103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49810
fragaria_vesca	FvH4_5g27550
malus_domestica	MD08G1249200.v1.1 MD15G1443800.v1.1
prunus_persica	Prupe.1G586400_v2.0.a1
pyrus_communis	pycom08g21570
rosa_chinensis	RchiOBHm_Chr7g0218921
rosa_laevigata	RLG00000002317
rosa_multiflora	Rmu_sc0003823.1_g000008
rosa_roxburghii	Rroxscaffold_3G00240310
rosa_rugosa	Rorug07G0179800
rosa_samantha	Rh7AG323100 Rh7BG314100 Rh7CG339800 Rh7DG320200
rosa_wichuraiana	Rw7G027380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1580
AarI	CACCTGC	1 cut(s)	1588
Acc36I	ACCTGC	1 cut(s)	1588
AccB1I	GGYRCC	1 cut(s)	2597
AccBSI	CCGCTC	1 cut(s)	3244
AccI	GTMKAC	2 cut(s)	2508, 2579
AccII	CGCG	4 cut(s)	17, 77, 740, 1456
AccIII	TCCGGA	1 cut(s)	349
AciI	CCGC	9 cut(s)	52, 75, 193, 202, 542, 1595, 2391, 3177, 3244
AclWI	GGATC	6 cut(s)	110, 123, 149, 768, 1690, 2133
AcoI	YGGCCR	1 cut(s)	3024
AcuI	CTGAAG	3 cut(s)	68, 728, 3111
AcyI	GRCGYC	3 cut(s)	72, 853, 2598
AfaI	GTAC	2 cut(s)	80, 1653
AfiI	CCNNNNNNNGG	3 cut(s)	178, 223, 1289
AflII	CTTAAG	1 cut(s)	1148
AflIII	ACRYGT	2 cut(s)	15, 2140
AhlI	ACTAGT	1 cut(s)	1637
AjiI	CACGTC	1 cut(s)	2122
AjnI	CCWGG	6 cut(s)	255, 856, 2600, 2824, 3182, 3196
AjuI	GAANNNNNNNTTGG	2 cut(s)	618, 650
AloI	GAACNNNNNNTCC	4 cut(s)	1498, 1530, 1755, 1787
Alw21I	GWGCWC	2 cut(s)	139, 1039
Alw26I	GTCTC	8 cut(s)	113, 600, 2392, 2474, 2480, 2725, 2768, 2960
AlwI	GGATC	6 cut(s)	110, 123, 149, 768, 1690, 2133
AlwNI	CAGNNNCTG	3 cut(s)	1508, 2057, 3288
Ama87I	CYCGRG	3 cut(s)	110, 289, 2626
Aor13HI	TCCGGA	1 cut(s)	349
AoxI	GGCC	4 cut(s)	451, 789, 1875, 3024
ApeKI	GCWGC	7 cut(s)	195, 938, 1787, 2162, 2223, 2393, 3084
ArsI	GACNNNNNNTTYG	4 cut(s)	218, 250, 852, 884
AseI	ATTAAT	1 cut(s)	2085
Asp700I	GAANNNNTTC	3 cut(s)	167, 1157, 1868
AspLEI	GCGC	7 cut(s)	86, 740, 742, 1458, 1549, 2545, 2600
AspS9I	GGNCC	3 cut(s)	315, 789, 2519
AsuHPI	GGTGA	4 cut(s)	1331, 1413, 2142, 2209
AsuNHI	GCTAGC	1 cut(s)	2042
AvaI	CYCGRG	3 cut(s)	110, 289, 2626
AvaII	GGWCC	2 cut(s)	315, 2519
BalI	TGGCCA	1 cut(s)	3026
BamHI	GGATCC	1 cut(s)	115
BanI	GGYRCC	1 cut(s)	2597
BanII	GRGCYC	1 cut(s)	2372
BbsI	GAAGAC	2 cut(s)	1892, 3281
Bbv12I	GWGCWC	2 cut(s)	139, 1039
BbvI	GCAGC	7 cut(s)	182, 925, 1799, 2149, 2235, 2380, 3096
BccI	CCATC	9 cut(s)	274, 539, 1786, 2155, 2716, 2979, 3071, 3089, 3287
BceAI	ACGGC	4 cut(s)	97, 421, 776, 876
BcgI	CGANNNNNNTGC	2 cut(s)	2937, 2971
BciT130I	CCWGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
BclI	TGATCA	2 cut(s)	238, 1708
BcoDI	GTCTC	8 cut(s)	113, 600, 2392, 2474, 2480, 2725, 2768, 2960
BcuI	ACTAGT	1 cut(s)	1637
BfmI	CTRYAG	4 cut(s)	932, 939, 1389, 1518
BfoI	RGCGCY	3 cut(s)	87, 1550, 2601
BfrI	CTTAAG	1 cut(s)	1148
BfuAI	ACCTGC	1 cut(s)	1588
BglI	GCCNNNNNGGC	1 cut(s)	2078
BglII	AGATCT	3 cut(s)	586, 1828, 2902
BlpI	GCTNAGC	2 cut(s)	381, 2047
Bme1390I	CCNGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
Bme18I	GGWCC	2 cut(s)	315, 2519
BmeT110I	CYCGRG	3 cut(s)	110, 289, 2626
BmgBI	CACGTC	1 cut(s)	2122
BmgT120I	GGNCC	3 cut(s)	315, 789, 2519
BmiI	GGNNCC	3 cut(s)	117, 2599, 3181
BmrFI	CCNGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
BmrI	ACTGGG	2 cut(s)	1620, 2885
BmsI	GCATC	6 cut(s)	529, 651, 661, 2739, 2902, 3177
BmtI	GCTAGC	1 cut(s)	2046
BmuI	ACTGGG	2 cut(s)	1620, 2885
BoxI	GACNNNNGTC	1 cut(s)	2466
BpiI	GAAGAC	2 cut(s)	1892, 3281
BpmI	CTGGAG	4 cut(s)	122, 143, 1038, 2496
Bpu10I	CCTNAGC	1 cut(s)	772
Bpu1102I	GCTNAGC	2 cut(s)	381, 2047
BpuEI	CTTGAG	1 cut(s)	776
BsaBI	GATNNNNATC	4 cut(s)	243, 284, 462, 833
BsaHI	GRCGYC	3 cut(s)	72, 853, 2598
BsaI	GGTCTC	2 cut(s)	2474, 2768
BsaJI	CCNNGG	8 cut(s)	177, 256, 792, 892, 1466, 2501, 2601, 3018
BsaWI	WCCGGW	1 cut(s)	349
BsaXI	ACNNNNNCTCC	4 cut(s)	1755, 1785, 2372, 2402
Bsc4I	CCNNNNNNNGG	3 cut(s)	178, 223, 1289
Bse118I	RCCGGY	1 cut(s)	1064
Bse1I	ACTGG	7 cut(s)	1245, 1478, 1615, 2542, 2791, 2880, 3193
Bse3DI	GCAATG	5 cut(s)	411, 417, 681, 1314, 2916
Bse8I	GATNNNNATC	4 cut(s)	243, 284, 462, 833
BseAI	TCCGGA	1 cut(s)	349
BseBI	CCWGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
BseDI	CCNNGG	8 cut(s)	177, 256, 792, 892, 1466, 2501, 2601, 3018
BseGI	GGATG	7 cut(s)	346, 642, 1778, 2708, 2917, 2990, 2995
BseJI	GATNNNNATC	4 cut(s)	243, 284, 462, 833
BseLI	CCNNNNNNNGG	3 cut(s)	178, 223, 1289
BseMI	GCAATG	5 cut(s)	411, 417, 681, 1314, 2916
BseMII	CTCAG	9 cut(s)	80, 372, 414, 662, 684, 2061, 2190, 2744, 2873
BseNI	ACTGG	7 cut(s)	1245, 1478, 1615, 2542, 2791, 2880, 3193
BsePI	GCGCGC	1 cut(s)	738
BseRI	GAGGAG	2 cut(s)	1871, 1874
BseXI	GCAGC	7 cut(s)	182, 925, 1799, 2149, 2235, 2380, 3096
BseYI	CCCAGC	1 cut(s)	2093
BsgI	GTGCAG	1 cut(s)	1521
Bsh1236I	CGCG	4 cut(s)	17, 77, 740, 1456
Bsh1285I	CGRYCG	2 cut(s)	193, 2951
BshFI	GGCC	4 cut(s)	453, 791, 1877, 3026
BshNI	GGYRCC	1 cut(s)	2597
BsiEI	CGRYCG	2 cut(s)	193, 2951
BsiHKAI	GWGCWC	2 cut(s)	139, 1039
BsiHKCI	CYCGRG	3 cut(s)	110, 289, 2626
BsiSI	CCGG	2 cut(s)	350, 1065
BsiWI	CGTACG	1 cut(s)	78
BslFI	GGGAC	3 cut(s)	1023, 1780, 2362
BslI	CCNNNNNNNGG	3 cut(s)	178, 223, 1289
BsmAI	GTCTC	8 cut(s)	113, 600, 2392, 2474, 2480, 2725, 2768, 2960
BsmBI	CGTCTC	2 cut(s)	113, 2960
BsmFI	GGGAC	3 cut(s)	1023, 1780, 2362
BsmI	GAATGC	2 cut(s)	703, 2009
BsnI	GGCC	4 cut(s)	453, 791, 1877, 3026
Bso31I	GGTCTC	2 cut(s)	2474, 2768
BsoBI	CYCGRG	3 cut(s)	110, 289, 2626
Bsp1286I	GDGCHC	3 cut(s)	139, 1039, 2372
Bsp13I	TCCGGA	1 cut(s)	349
Bsp1407I	TGTACA	1 cut(s)	1651
Bsp1720I	GCTNAGC	2 cut(s)	381, 2047
Bsp19I	CCATGG	2 cut(s)	2501, 3018
BspACI	CCGC	9 cut(s)	52, 75, 193, 202, 542, 1595, 2391, 3177, 3244
BspANI	GGCC	4 cut(s)	453, 791, 1877, 3026
BspCNI	CTCAG	9 cut(s)	81, 373, 415, 661, 685, 2060, 2191, 2745, 2874
BspEI	TCCGGA	1 cut(s)	349
BspFNI	CGCG	4 cut(s)	17, 77, 740, 1456
BspHI	TCATGA	3 cut(s)	577, 1951, 3106
BspLI	GGNNCC	3 cut(s)	117, 2599, 3181
BspMAI	CTGCAG	2 cut(s)	943, 1522
BspMI	ACCTGC	1 cut(s)	1588
BspOI	GCTAGC	1 cut(s)	2046
BspPI	GGATC	6 cut(s)	110, 123, 149, 768, 1690, 2133
BspT107I	GGYRCC	1 cut(s)	2597
BspTI	CTTAAG	1 cut(s)	1148
BspTNI	GGTCTC	2 cut(s)	2474, 2768
BsrBI	CCGCTC	1 cut(s)	3244
BsrDI	GCAATG	5 cut(s)	411, 417, 681, 1314, 2916
BsrFI	RCCGGY	1 cut(s)	1064
BsrGI	TGTACA	1 cut(s)	1651
BsrI	ACTGG	7 cut(s)	1245, 1478, 1615, 2542, 2791, 2880, 3193
BssAI	RCCGGY	1 cut(s)	1064
BssECI	CCNNGG	8 cut(s)	177, 256, 792, 892, 1466, 2501, 2601, 3018
BssHII	GCGCGC	1 cut(s)	738
BssNI	GRCGYC	3 cut(s)	72, 853, 2598
BssT1I	CCWWGG	4 cut(s)	177, 1466, 2501, 3018
Bst2UI	CCWGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
Bst6I	CTCTTC	2 cut(s)	2107, 2936
BstACI	GRCGYC	3 cut(s)	72, 853, 2598
BstAFI	CTTAAG	1 cut(s)	1148
BstAPI	GCANNNNNTGC	1 cut(s)	735
BstAUI	TGTACA	1 cut(s)	1651
BstC8I	GCNNGC	5 cut(s)	740, 1083, 2044, 2705, 3246
BstDSI	CCRYGG	4 cut(s)	792, 892, 2501, 3018
BstEII	GGTNACC	2 cut(s)	251, 2255
BstF5I	GGATG	7 cut(s)	346, 642, 1778, 2708, 2917, 2990, 2995
BstFNI	CGCG	4 cut(s)	17, 77, 740, 1456
BstH2I	RGCGCY	3 cut(s)	87, 1550, 2601
BstHHI	GCGC	7 cut(s)	86, 740, 742, 1458, 1549, 2545, 2600
BstMAI	GTCTC	8 cut(s)	113, 600, 2392, 2474, 2480, 2725, 2768, 2960
BstMCI	CGRYCG	2 cut(s)	193, 2951
BstMWI	GCNNNNNNNGC	9 cut(s)	58, 83, 195, 201, 735, 1043, 2048, 2078, 3174
BstNI	CCWGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
BstNSI	RCATGY	2 cut(s)	1085, 2144
BstPAI	GACNNNNGTC	1 cut(s)	2466
BstPI	GGTNACC	2 cut(s)	251, 2255
BstSCI	CCNGG	6 cut(s)	255, 856, 2600, 2824, 3182, 3196
BstSFI	CTRYAG	4 cut(s)	932, 939, 1389, 1518
BstUI	CGCG	4 cut(s)	17, 77, 740, 1456
BstV1I	GCAGC	7 cut(s)	182, 925, 1799, 2149, 2235, 2380, 3096
BstV2I	GAAGAC	2 cut(s)	1892, 3281
BstX2I	RGATCY	6 cut(s)	115, 141, 586, 1682, 1828, 2902
BstXI	CCANNNNNNTGG	2 cut(s)	312, 1473
BstYI	RGATCY	6 cut(s)	115, 141, 586, 1682, 1828, 2902
BsuRI	GGCC	4 cut(s)	453, 791, 1877, 3026
BtgI	CCRYGG	4 cut(s)	792, 892, 2501, 3018
BtrI	CACGTC	1 cut(s)	2122
BtsCI	GGATG	7 cut(s)	346, 642, 1778, 2708, 2917, 2990, 2995
BtsIMutI	CAGTG	4 cut(s)	102, 1252, 2847, 3087
BveI	ACCTGC	1 cut(s)	1588
Cac8I	GCNNGC	5 cut(s)	740, 1083, 2044, 2705, 3246
CaiI	CAGNNNCTG	3 cut(s)	1508, 2057, 3288
CciI	TCATGA	3 cut(s)	577, 1951, 3106
CfoI	GCGC	7 cut(s)	86, 740, 742, 1458, 1549, 2545, 2600
Cfr10I	RCCGGY	1 cut(s)	1064
Cfr13I	GGNCC	3 cut(s)	315, 789, 2519
CseI	GACGC	7 cut(s)	6, 23, 80, 95, 842, 1462, 2977
Csp6I	GTAC	2 cut(s)	79, 1652
CviQI	GTAC	2 cut(s)	79, 1652
DinI	GGCGCC	1 cut(s)	2599
DraI	TTTAAA	2 cut(s)	2406, 2452
EaeI	YGGCCR	1 cut(s)	3024
Eam1104I	CTCTTC	2 cut(s)	2107, 2936
EarI	CTCTTC	2 cut(s)	2107, 2936
Eco130I	CCWWGG	4 cut(s)	177, 1466, 2501, 3018
Eco147I	AGGCCT	1 cut(s)	1877
Eco24I	GRGCYC	1 cut(s)	2372
Eco31I	GGTCTC	2 cut(s)	2474, 2768
Eco32I	GATATC	2 cut(s)	408, 460
Eco47I	GGWCC	2 cut(s)	315, 2519
Eco57I	CTGAAG	3 cut(s)	68, 728, 3111
Eco88I	CYCGRG	3 cut(s)	110, 289, 2626
Eco91I	GGTNACC	2 cut(s)	251, 2255
EcoO65I	GGTNACC	2 cut(s)	251, 2255
EcoRI	GAATTC	2 cut(s)	2234, 3192
EcoRII	CCWGG	6 cut(s)	255, 856, 2600, 2824, 3182, 3196
EcoRV	GATATC	2 cut(s)	408, 460
EcoT14I	CCWWGG	4 cut(s)	177, 1466, 2501, 3018
EcoT22I	ATGCAT	1 cut(s)	3170
EcoT38I	GRGCYC	1 cut(s)	2372
EgeI	GGCGCC	1 cut(s)	2599
EheI	GGCGCC	1 cut(s)	2599
ErhI	CCWWGG	4 cut(s)	177, 1466, 2501, 3018
Esp3I	CGTCTC	2 cut(s)	113, 2960
FalI	AAGNNNNNCTT	8 cut(s)	1142, 1174, 1211, 1243, 2696, 2728, 3102, 3134
FaqI	GGGAC	3 cut(s)	1023, 1780, 2362
FauI	CCCGC	1 cut(s)	3237
FauNDI	CATATG	2 cut(s)	1054, 2115
FbaI	TGATCA	2 cut(s)	238, 1708
FblI	GTMKAC	2 cut(s)	2508, 2579
FokI	GGATG	7 cut(s)	333, 629, 1765, 2695, 2924, 2997, 3002
FriOI	GRGCYC	1 cut(s)	2372
GlaI	GCGC	7 cut(s)	85, 739, 741, 1457, 1548, 2544, 2599
GsaI	CCCAGC	1 cut(s)	2097
GsuI	CTGGAG	4 cut(s)	122, 143, 1038, 2496
HaeII	RGCGCY	3 cut(s)	87, 1550, 2601
HaeIII	GGCC	4 cut(s)	453, 791, 1877, 3026
HapII	CCGG	2 cut(s)	350, 1065
HgaI	GACGC	7 cut(s)	6, 23, 80, 95, 842, 1462, 2977
HhaI	GCGC	7 cut(s)	86, 740, 742, 1458, 1549, 2545, 2600
Hin1I	GRCGYC	3 cut(s)	72, 853, 2598
Hin6I	GCGC	7 cut(s)	84, 738, 740, 1456, 1547, 2543, 2598
HinP1I	GCGC	7 cut(s)	84, 738, 740, 1456, 1547, 2543, 2598
HincII	GTYRAC	5 cut(s)	37, 907, 1106, 1479, 2530
HindII	GTYRAC	5 cut(s)	37, 907, 1106, 1479, 2530
HindIII	AAGCTT	3 cut(s)	911, 2176, 3116
HpaI	GTTAAC	3 cut(s)	907, 1479, 2530
HpaII	CCGG	2 cut(s)	350, 1065
HphI	GGTGA	4 cut(s)	1331, 1413, 2142, 2209
Hpy99I	CGWCG	3 cut(s)	17, 22, 74
HpyCH4IV	ACGT	2 cut(s)	1481, 2121
HpyF10VI	GCNNNNNNNGC	9 cut(s)	58, 83, 195, 201, 735, 1043, 2048, 2078, 3174
HpySE526I	ACGT	2 cut(s)	1481, 2121
Hsp92I	GRCGYC	3 cut(s)	72, 853, 2598
HspAI	GCGC	7 cut(s)	84, 738, 740, 1456, 1547, 2543, 2598
KasI	GGCGCC	1 cut(s)	2597
Kpn2I	TCCGGA	1 cut(s)	349
Ksp22I	TGATCA	2 cut(s)	238, 1708
KspAI	GTTAAC	3 cut(s)	907, 1479, 2530
LmnI	GCTCC	2 cut(s)	103, 3185
Lsp1109I	GCAGC	7 cut(s)	182, 925, 1799, 2149, 2235, 2380, 3096
LweI	GCATC	6 cut(s)	529, 651, 661, 2739, 2902, 3177
MaeII	ACGT	2 cut(s)	1481, 2121
MaeIII	GTNAC	8 cut(s)	251, 1307, 1606, 1633, 1666, 2215, 2255, 3284
MbiI	CCGCTC	1 cut(s)	3244
MfeI	CAATTG	2 cut(s)	1434, 3216
MflI	RGATCY	6 cut(s)	115, 141, 586, 1682, 1828, 2902
MhlI	GDGCHC	3 cut(s)	139, 1039, 2372
MlsI	TGGCCA	1 cut(s)	3026
MluI	ACGCGT	1 cut(s)	15
MluNI	TGGCCA	1 cut(s)	3026
Mly113I	GGCGCC	1 cut(s)	2598
MlyI	GAGTC	9 cut(s)	347, 1637, 1755, 2048, 2210, 2482, 2487, 2953, 3119
MmeI	TCCRAC	1 cut(s)	383
Mox20I	TGGCCA	1 cut(s)	3026
Mph1103I	ATGCAT	1 cut(s)	3170
MroI	TCCGGA	1 cut(s)	349
MroXI	GAANNNNTTC	3 cut(s)	167, 1157, 1868
MscI	TGGCCA	1 cut(s)	3026
Msp20I	TGGCCA	1 cut(s)	3026
MspA1I	CMGCKG	3 cut(s)	195, 1101, 2393
MspCI	CTTAAG	1 cut(s)	1148
MspI	CCGG	2 cut(s)	350, 1065
MspR9I	CCNGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
MunI	CAATTG	2 cut(s)	1434, 3216
Mva1269I	GAATGC	2 cut(s)	703, 2009
MvaI	CCWGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
MvnI	CGCG	4 cut(s)	17, 77, 740, 1456
MwoI	GCNNNNNNNGC	9 cut(s)	58, 83, 195, 201, 735, 1043, 2048, 2078, 3174
NarI	GGCGCC	1 cut(s)	2598
NcoI	CCATGG	2 cut(s)	2501, 3018
NdeI	CATATG	2 cut(s)	1054, 2115
NheI	GCTAGC	1 cut(s)	2042
NlaIV	GGNNCC	3 cut(s)	117, 2599, 3181
NmeAIII	GCCGAG	1 cut(s)	2098
NmuCI	GTSAC	1 cut(s)	2215
NsiI	ATGCAT	1 cut(s)	3170
NspI	RCATGY	2 cut(s)	1085, 2144
PaeI	GCATGC	1 cut(s)	1085
PaeR7I	CTCGAG	1 cut(s)	110
PagI	TCATGA	3 cut(s)	577, 1951, 3106
PaqCI	CACCTGC	1 cut(s)	1588
PauI	GCGCGC	1 cut(s)	738
PceI	AGGCCT	1 cut(s)	1877
PciI	ACATGT	1 cut(s)	2140
PctI	GAATGC	2 cut(s)	703, 2009
PdmI	GAANNNNTTC	3 cut(s)	167, 1157, 1868
Pfl23II	CGTACG	1 cut(s)	78
PfoI	TCCNGGA	3 cut(s)	856, 2824, 3182
Ple19I	CGATCG	1 cut(s)	2951
PleI	GAGTC	9 cut(s)	347, 1636, 1754, 2048, 2209, 2482, 2486, 2952, 3119
PluTI	GGCGCC	1 cut(s)	2601
PpsI	GAGTC	9 cut(s)	347, 1636, 1754, 2048, 2209, 2482, 2486, 2952, 3119
PscI	ACATGT	1 cut(s)	2140
PshAI	GACNNNNGTC	1 cut(s)	2466
PshBI	ATTAAT	1 cut(s)	2085
PsiI	TTATAA	1 cut(s)	1580
Psp6I	CCWGG	6 cut(s)	255, 856, 2600, 2824, 3182, 3196
PspEI	GGTNACC	2 cut(s)	251, 2255
PspFI	CCCAGC	1 cut(s)	2093
PspGI	CCWGG	6 cut(s)	255, 856, 2600, 2824, 3182, 3196
PspLI	CGTACG	1 cut(s)	78
PspN4I	GGNNCC	3 cut(s)	117, 2599, 3181
PspPI	GGNCC	3 cut(s)	315, 789, 2519
PstI	CTGCAG	2 cut(s)	943, 1522
PstNI	CAGNNNCTG	3 cut(s)	1508, 2057, 3288
PsuI	RGATCY	6 cut(s)	115, 141, 586, 1682, 1828, 2902
PteI	GCGCGC	1 cut(s)	738
PvuI	CGATCG	1 cut(s)	2951
PvuII	CAGCTG	1 cut(s)	1101
RsaI	GTAC	2 cut(s)	80, 1653
RsaNI	GTAC	2 cut(s)	79, 1652
Sau96I	GGNCC	3 cut(s)	315, 789, 2519
SchI	GAGTC	9 cut(s)	347, 1637, 1755, 2048, 2210, 2482, 2487, 2953, 3119
ScrFI	CCNGG	6 cut(s)	257, 858, 2602, 2826, 3184, 3198
SduI	GDGCHC	3 cut(s)	139, 1039, 2372
SfaNI	GCATC	6 cut(s)	529, 651, 661, 2739, 2902, 3177
SfcI	CTRYAG	4 cut(s)	932, 939, 1389, 1518
SfoI	GGCGCC	1 cut(s)	2599
Sfr274I	CTCGAG	1 cut(s)	110
SinI	GGWCC	2 cut(s)	315, 2519
SlaI	CTCGAG	1 cut(s)	110
SmlI	CTYRAG	3 cut(s)	110, 755, 1148
SmoI	CTYRAG	3 cut(s)	110, 755, 1148
SpeI	ACTAGT	1 cut(s)	1637
SphI	GCATGC	1 cut(s)	1085
SseBI	AGGCCT	1 cut(s)	1877
SsiI	CCGC	9 cut(s)	52, 75, 193, 202, 542, 1595, 2391, 3177, 3244
SspDI	GGCGCC	1 cut(s)	2597
SspI	AATATT	2 cut(s)	1137, 1867
StuI	AGGCCT	1 cut(s)	1877
StyD4I	CCNGG	6 cut(s)	255, 856, 2600, 2824, 3182, 3196
StyI	CCWWGG	4 cut(s)	177, 1466, 2501, 3018
TaiI	ACGT	2 cut(s)	1484, 2124
TaqI	TCGA	9 cut(s)	111, 1039, 1072, 1552, 1833, 1883, 2439, 2947, 2951
TatI	WGTACW	1 cut(s)	1651
TauI	GCSGC	3 cut(s)	77, 1597, 3180
TscAI	CASTG	4 cut(s)	102, 1252, 2854, 3094
TseFI	GTSAC	1 cut(s)	2215
TseI	GCWGC	7 cut(s)	195, 938, 1787, 2162, 2223, 2393, 3084
Tsp45I	GTSAC	1 cut(s)	2215
TspRI	CASTG	4 cut(s)	102, 1252, 2854, 3094
Vha464I	CTTAAG	1 cut(s)	1148
VpaK11BI	GGWCC	2 cut(s)	315, 2519
VspI	ATTAAT	1 cut(s)	2085
XceI	RCATGY	2 cut(s)	1085, 2144
XhoI	CTCGAG	1 cut(s)	110
XmiI	GTMKAC	2 cut(s)	2508, 2579
XmnI	GAANNNNTTC	3 cut(s)	167, 1157, 1868
Zsp2I	ATGCAT	1 cut(s)	3170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.