Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008923

Physical Location & Seq

Genomic Coordinates Forward (+)

24789468 .. 24797533

Gene Structure 8066 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34111.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGCCGCCTATTGGGGTGCAATTGCTTATTCAAGATCGTCATGTAATGATGGATAATGGGTTTGTCCAAGTGACATTGTCAAAGCCAGAGGGAATAGTCACTGGAATACGATACAATGGCCTTGATAACTTGCTCGAGATTCGTAATGAGGAAACTAATAGAGGCTACTGGGACCTGGTTTGGAGTGAAGCGAGTACCGGAACAACAGGAATATTTGATGTGATCAAAGGTACAGAATTTGATGTTATAGTGGAAAATGATGATCAGGTGGAGCTCTCTTTCAAACGAACCTGGGATCCCTCTCAAGAGGGCAAGCTTGTTCCCTTGAATATTGATAAAAGGTTCGTAATGGTTCGAGGTTCTTCAGGCTTCTACTCTTACGCTATCTACGAGCACTTACAGGAATGGCCTGCTTTTCAGCTCGGAGAAACCAGAATTGCGTTCAAACTCAGAAAAGACAAGTTTCACTACATGGCCATGGCGGATAACCGGCAAAGATACATGCCGTTGCCTGATGACCGTTTACCACTCAGAGGCCAACCCCTGGCTTATCCGGAGGCAGTTCTACTCACCAATCCGATCGAGCCTGAACTTAAAGGAGAAGTGGATGACAAGTACCAGTACTCTTGTGATAACAAGGATAACCGGGTACATGGGTGGATATGCACTGATCCGCCGGTGGGATTGTGGCAAATTACACCCAGCAACGAGTTCCGATCTGGTGGACCTGTTAAGCAAAACCTTACCTCTCATGTTGGTCCAACCACCCTGGCGATGTTTCTAAGCGCTCATTATACCGGAGAAGATTTGGTGCCAAAATTTACAACCGGTGAATACTGGAAGAAAGTTTTCGGCCCTGTGTTTATGTATGTCAATTCGGAATATGCAGGAAATGACCCGTTAGTTTCACTATGGGAGGATGCTAAACTACAAATGATGATTGAAGTCCAAAGCTGGCCATACAGCTTCCCTGCATCTGAAGATTTTCCCAAGTCGGGCCAACGTGGTAACATTAGTGGTAGACTACTTATCCAAGACAGATATATTAGCGATGACTATGTATCAGCCAACGGTGCATATGTCGGGTTAGCCCCTCCAGGAGAGGTTGGATCGTGGCAAAGAGAATGTAAGGACTATCAATTTTGGACAACAACAGACGAGGATGGCTACTTTTCTATCAATGACATACGGACCGGCGCTTATAACCTTAACGCATGGGTTCCTGGTTTTATCGGAGATTATCAATATGATGATGTTATCACTATAACTTCAGGTTGTGAGATTTATATGGGTGAGCTTGTGTATGAGCCTCCTAGAGATGGCCCAACCTTATGGGAAATTGGCATCCCAGATCGATCTGCTGCAGAGTTTTACGTTCCTGATCCTAATTCCAAGTACATTAACAGTCTGTTTGTCAATCATCCGGACAGGTTTAGGCAGTATGGACTGTGGGATAGATACACAGAGTTATATCCTGATGCGGACTTGGTTTACACGGTTGGTGTTAGTGACTATAGCAAAGACTGGTTTTTTGCTCAGGTTACCAGGAAGAAAGGTGACAATAAGTATCAAGGAACAACTTGGCAAATCAAATTCAAGCTGGATGATGTAGACCAGAATGGCACCTATAAGCTGAGAGTAGCAATTGCATCTGCAACTCTTTCGGAATTACAGGTTCGAGTAAACAACCCAAAGGCGAATCCTCCTCTATTCACAAGTGGTTTGATAGGGAAAGACAATTCCATTGCAAGACATGGAATCCACGGGCTCTATTGGCTTTACAAGGTCGATATACCGAATTCTCAGCTTGTTCAGGGAGACAATACTATCTTTCTAACTCAACCAAGAAGCACTGGTCCTTTTCAAGGGATCATGTATGACTATATTCGCTTAGAAGGTCCGCCATCTGCAAGTTCCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

641

Amino Acids

72.99

Weight (kDa)

4.92

Isoelectric Point (pI)

32.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	6 - 202	2.5e-97	Rhamnogalacturonate lyase family
fn3_3	PF14686	357 - 428	2.6e-27	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	443 - 631	2.1e-55	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09890 AT1G09890 AT1G09890 AT1G09890 AT1G09890
fragaria_vesca	FvH4_5g34111
malus_domestica	MD08G1205800.v1.1 MD15G1389300.v1.1
prunus_persica	Prupe.1G538300_v2.0.a1
pyrus_communis	pycom08g17790 pycom08g17800
rosa_chinensis	RchiOBHm_Chr7g0233621
rosa_laevigata	RLG00000001248
rosa_multiflora	Rmu_sc0003712.1_g000013
rosa_roxburghii	Rroxscaffold_3G00227110
rosa_rugosa	Rorug03G0282300 Rorug07G0062800 Rorug07G0281700
rosa_samantha	Rh7AG438200 Rh7BG410900 Rh7CG457800 Rh7DG427200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1203
AccB1I	GGYRCC	2 cut(s)	811, 1622
AccB7I	CCANNNNNTGG	1 cut(s)	544
AccI	GTMKAC	2 cut(s)	1021, 1611
AccIII	TCCGGA	2 cut(s)	553, 1423
AciI	CCGC	5 cut(s)	5, 482, 674, 1481, 1901
AclWI	GGATC	6 cut(s)	290, 303, 665, 1117, 1376, 1877
AcoI	YGGCCR	2 cut(s)	474, 956
AcsI	RAATTY	4 cut(s)	236, 818, 1592, 1798
AcuI	CTGAAG	3 cut(s)	348, 999, 1254
AfaI	GTAC	6 cut(s)	196, 232, 617, 623, 651, 1397
AfeI	AGCGCT	1 cut(s)	787
AfiI	CCNNNNNNNGG	7 cut(s)	11, 533, 544, 680, 995, 1319, 1865
AgeI	ACCGGT	1 cut(s)	827
AgsI	TTSAA	7 cut(s)	32, 283, 328, 445, 944, 1597, 1865
AjnI	CCWGG	7 cut(s)	174, 290, 543, 768, 1096, 1222, 1544
AloI	GAACNNNNNNTCC	2 cut(s)	280, 312
AluBI	AGCT	9 cut(s)	274, 316, 421, 954, 966, 1297, 1600, 1633, 1807
AluI	AGCT	9 cut(s)	274, 316, 421, 954, 966, 1297, 1600, 1633, 1807
Alw21I	GWGCWC	2 cut(s)	276, 396
Alw26I	GTCTC	1 cut(s)	1812
AlwI	GGATC	6 cut(s)	290, 303, 665, 1117, 1376, 1877
Ama87I	CYCGRG	1 cut(s)	134
Aor13HI	TCCGGA	2 cut(s)	553, 1423
Aor51HI	AGCGCT	1 cut(s)	787
AoxI	GGCC	8 cut(s)	118, 407, 474, 535, 853, 956, 997, 1321
ApeKI	GCWGC	1 cut(s)	1361
ApoI	RAATTY	4 cut(s)	236, 818, 1592, 1798
ArsI	GACNNNNNNTTYG	2 cut(s)	1514, 1546
AsiGI	ACCGGT	1 cut(s)	827
Asp700I	GAANNNNTTC	2 cut(s)	848, 984
AspLEI	GCGC	2 cut(s)	788, 1199
AspS9I	GGNCC	9 cut(s)	172, 725, 758, 854, 997, 1191, 1322, 1856, 1898
AsuC2I	CCSGG	1 cut(s)	647
AsuHPI	GGTGA	4 cut(s)	562, 842, 1304, 1568
AvaI	CYCGRG	1 cut(s)	134
AvaII	GGWCC	6 cut(s)	172, 725, 758, 1191, 1856, 1898
BaeI	ACNNNNGTAYC	2 cut(s)	641, 674
BalI	TGGCCA	2 cut(s)	476, 958
BamHI	GGATCC	1 cut(s)	295
BanI	GGYRCC	2 cut(s)	811, 1622
BanII	GRGCYC	2 cut(s)	276, 1770
Bbv12I	GWGCWC	2 cut(s)	276, 396
BbvI	GCAGC	1 cut(s)	1348
BccI	CCATC	4 cut(s)	43, 1157, 1313, 1912
BceAI	ACGGC	1 cut(s)	490
BcgI	CGANNNNNNTGC	2 cut(s)	1644, 1678
BciT130I	CCWGG	7 cut(s)	176, 292, 545, 770, 1098, 1224, 1546
BclI	TGATCA	2 cut(s)	222, 262
BcnI	CCSGG	1 cut(s)	647
BcoDI	GTCTC	1 cut(s)	1812
BfaI	CTAG	1 cut(s)	1314
BfmI	CTRYAG	2 cut(s)	1362, 1513
BfoI	RGCGCY	2 cut(s)	789, 1200
BisI	GCNGC	2 cut(s)	5, 1362
BlsI	GCNGC	2 cut(s)	6, 1363
BmcAI	AGTACT	1 cut(s)	623
Bme1390I	CCNGG	8 cut(s)	176, 292, 545, 647, 770, 1098, 1224, 1546
Bme18I	GGWCC	6 cut(s)	172, 725, 758, 1191, 1856, 1898
BmeT110I	CYCGRG	1 cut(s)	134
BmgT120I	GGNCC	9 cut(s)	172, 725, 758, 854, 997, 1191, 1322, 1856, 1898
BmiI	GGNNCC	5 cut(s)	173, 297, 813, 1221, 1624
BmrFI	CCNGG	8 cut(s)	176, 292, 545, 647, 770, 1098, 1224, 1546
BmrI	ACTGGG	1 cut(s)	178
BmsI	GCATC	5 cut(s)	910, 983, 1353, 1468, 1658
BmuI	ACTGGG	1 cut(s)	178
BpmI	CTGGAG	1 cut(s)	1080
Bpu10I	CCTNAGC	1 cut(s)	1536
BpuEI	CTTGAG	1 cut(s)	288
BpuMI	CCSGG	1 cut(s)	647
Bsa29I	ATCGAT	1 cut(s)	1354
BsaJI	CCNNGG	5 cut(s)	291, 477, 543, 768, 1762
BsaWI	WCCGGW	5 cut(s)	197, 553, 797, 827, 1423
Bsc4I	CCNNNNNNNGG	7 cut(s)	11, 533, 544, 680, 995, 1319, 1865
Bse118I	RCCGGY	4 cut(s)	489, 676, 827, 1193
Bse1I	ACTGG	6 cut(s)	106, 173, 619, 842, 1529, 1858
Bse3DI	GCAATG	1 cut(s)	1743
BseAI	TCCGGA	2 cut(s)	553, 1423
BseBI	CCWGG	7 cut(s)	176, 292, 545, 770, 1098, 1224, 1546
BseCI	ATCGAT	1 cut(s)	1354
BseDI	CCNNGG	5 cut(s)	291, 477, 543, 768, 1762
BseGI	GGATG	6 cut(s)	613, 925, 1168, 1344, 1420, 1609
BseLI	CCNNNNNNNGG	7 cut(s)	11, 533, 544, 680, 995, 1319, 1865
BseMI	GCAATG	1 cut(s)	1743
BseMII	CTCAG	5 cut(s)	463, 544, 1550, 1625, 1817
BseNI	ACTGG	6 cut(s)	106, 173, 619, 842, 1529, 1858
BseRI	GAGGAG	1 cut(s)	1695
BseXI	GCAGC	1 cut(s)	1348
BseYI	CCCAGC	1 cut(s)	701
Bsh1285I	CGRYCG	1 cut(s)	582
BshFI	GGCC	8 cut(s)	120, 409, 476, 537, 855, 958, 999, 1323
BshNI	GGYRCC	2 cut(s)	811, 1622
BshTI	ACCGGT	1 cut(s)	827
BshVI	ATCGAT	1 cut(s)	1354
BsiEI	CGRYCG	1 cut(s)	582
BsiHKAI	GWGCWC	2 cut(s)	276, 396
BsiHKCI	CYCGRG	1 cut(s)	134
BsiSI	CCGG	9 cut(s)	198, 490, 554, 646, 677, 798, 828, 1194, 1424
BslFI	GGGAC	1 cut(s)	185
BslI	CCNNNNNNNGG	7 cut(s)	11, 533, 544, 680, 995, 1319, 1865
BsmAI	GTCTC	1 cut(s)	1812
BsmFI	GGGAC	1 cut(s)	185
BsnI	GGCC	8 cut(s)	120, 409, 476, 537, 855, 958, 999, 1323
BsoBI	CYCGRG	1 cut(s)	134
Bsp1286I	GDGCHC	3 cut(s)	276, 396, 1770
Bsp13I	TCCGGA	2 cut(s)	553, 1423
Bsp19I	CCATGG	1 cut(s)	477
BspACI	CCGC	5 cut(s)	5, 482, 674, 1481, 1901
BspANI	GGCC	8 cut(s)	120, 409, 476, 537, 855, 958, 999, 1323
BspCNI	CTCAG	5 cut(s)	462, 543, 1549, 1626, 1816
BspDI	ATCGAT	1 cut(s)	1354
BspEI	TCCGGA	2 cut(s)	553, 1423
BspLI	GGNNCC	5 cut(s)	173, 297, 813, 1221, 1624
BspMAI	CTGCAG	1 cut(s)	1366
BspPI	GGATC	6 cut(s)	290, 303, 665, 1117, 1376, 1877
BspT107I	GGYRCC	2 cut(s)	811, 1622
BsrDI	GCAATG	1 cut(s)	1743
BsrFI	RCCGGY	4 cut(s)	489, 676, 827, 1193
BsrI	ACTGG	6 cut(s)	106, 173, 619, 842, 1529, 1858
BssAI	RCCGGY	4 cut(s)	489, 676, 827, 1193
BssECI	CCNNGG	5 cut(s)	291, 477, 543, 768, 1762
BssT1I	CCWWGG	1 cut(s)	477
Bst2UI	CCWGG	7 cut(s)	176, 292, 545, 770, 1098, 1224, 1546
Bst4CI	ACNGT	5 cut(s)	521, 1073, 1406, 1449, 1498
BstC8I	GCNNGC	3 cut(s)	314, 411, 956
BstDEI	CTNAG	7 cut(s)	449, 530, 782, 1536, 1634, 1803, 1891
BstDSI	CCRYGG	2 cut(s)	477, 1762
BstEII	GGTNACC	1 cut(s)	1540
BstENI	CCTNNNNNAGG	1 cut(s)	1863
BstF5I	GGATG	6 cut(s)	613, 925, 1168, 1344, 1420, 1609
BstH2I	RGCGCY	2 cut(s)	789, 1200
BstHHI	GCGC	2 cut(s)	788, 1199
BstMAI	GTCTC	1 cut(s)	1812
BstMCI	CGRYCG	1 cut(s)	582
BstMWI	GCNNNNNNNGC	2 cut(s)	1073, 1774
BstNI	CCWGG	7 cut(s)	176, 292, 545, 770, 1098, 1224, 1546
BstNSI	RCATGY	1 cut(s)	505
BstPI	GGTNACC	1 cut(s)	1540
BstSCI	CCNGG	8 cut(s)	174, 290, 543, 645, 768, 1096, 1222, 1544
BstSFI	CTRYAG	2 cut(s)	1362, 1513
BstV1I	GCAGC	1 cut(s)	1348
BstX2I	RGATCY	1 cut(s)	295
BstXI	CCANNNNNNTGG	1 cut(s)	1332
BstYI	RGATCY	1 cut(s)	295
Bsu15I	ATCGAT	1 cut(s)	1354
BsuRI	GGCC	8 cut(s)	120, 409, 476, 537, 855, 958, 999, 1323
BsuTUI	ATCGAT	1 cut(s)	1354
BtgI	CCRYGG	2 cut(s)	477, 1762
BtgZI	GCGATG	2 cut(s)	788, 1065
BtsCI	GGATG	6 cut(s)	613, 925, 1168, 1344, 1420, 1609
BtsIMutI	CAGTG	3 cut(s)	99, 666, 1851
Cac8I	GCNNGC	3 cut(s)	314, 411, 956
CfoI	GCGC	2 cut(s)	788, 1199
Cfr10I	RCCGGY	4 cut(s)	489, 676, 827, 1193
Cfr13I	GGNCC	9 cut(s)	172, 725, 758, 854, 997, 1191, 1322, 1856, 1898
ClaI	ATCGAT	1 cut(s)	1354
CpoI	CGGWCCG	1 cut(s)	1191
CsiI	ACCWGGT	1 cut(s)	174
Csp6I	GTAC	6 cut(s)	195, 231, 616, 622, 650, 1396
CspAI	ACCGGT	1 cut(s)	827
CspI	CGGWCCG	1 cut(s)	1191
CviAII	CATG	9 cut(s)	41, 472, 478, 502, 653, 752, 1215, 1754, 1873
CviQI	GTAC	6 cut(s)	195, 231, 616, 622, 650, 1396
DdeI	CTNAG	7 cut(s)	449, 530, 782, 1536, 1634, 1803, 1891
EaeI	YGGCCR	2 cut(s)	474, 956
EciI	GGCGGA	3 cut(s)	497, 663, 1890
Ecl136II	GAGCTC	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	477
Eco24I	GRGCYC	2 cut(s)	276, 1770
Eco47I	GGWCC	6 cut(s)	172, 725, 758, 1191, 1856, 1898
Eco47III	AGCGCT	1 cut(s)	787
Eco53kI	GAGCTC	1 cut(s)	274
Eco57I	CTGAAG	3 cut(s)	348, 999, 1254
Eco88I	CYCGRG	1 cut(s)	134
Eco91I	GGTNACC	1 cut(s)	1540
EcoICRI	GAGCTC	1 cut(s)	274
EcoNI	CCTNNNNNAGG	1 cut(s)	1863
EcoO109I	RGGNCCY	1 cut(s)	172
EcoO65I	GGTNACC	1 cut(s)	1540
EcoRI	GAATTC	1 cut(s)	1798
EcoRII	CCWGG	7 cut(s)	174, 290, 543, 768, 1096, 1222, 1544
EcoT14I	CCWWGG	1 cut(s)	477
EcoT38I	GRGCYC	2 cut(s)	276, 1770
ErhI	CCWWGG	1 cut(s)	477
FaeI	CATG	9 cut(s)	44, 475, 481, 505, 656, 755, 1218, 1757, 1876
FaqI	GGGAC	1 cut(s)	185
FatI	CATG	9 cut(s)	40, 471, 477, 501, 652, 751, 1214, 1753, 1872
FauNDI	CATATG	1 cut(s)	1078
FbaI	TGATCA	2 cut(s)	222, 262
FblI	GTMKAC	2 cut(s)	1021, 1611
Fnu4HI	GCNGC	2 cut(s)	5, 1362
FokI	GGATG	6 cut(s)	620, 932, 1175, 1331, 1407, 1616
FriOI	GRGCYC	2 cut(s)	276, 1770
Fsp4HI	GCNGC	2 cut(s)	5, 1362
FspBI	CTAG	1 cut(s)	1314
GlaI	GCGC	2 cut(s)	787, 1198
GluI	GCNGC	2 cut(s)	5, 1362
GsaI	CCCAGC	1 cut(s)	705
GsuI	CTGGAG	1 cut(s)	1080
HaeII	RGCGCY	2 cut(s)	789, 1200
HaeIII	GGCC	8 cut(s)	120, 409, 476, 537, 855, 958, 999, 1323
HapII	CCGG	9 cut(s)	198, 490, 554, 646, 677, 798, 828, 1194, 1424
HhaI	GCGC	2 cut(s)	788, 1199
Hin1II	CATG	9 cut(s)	44, 475, 481, 505, 656, 755, 1218, 1757, 1876
Hin6I	GCGC	2 cut(s)	786, 1197
HinP1I	GCGC	2 cut(s)	786, 1197
HindIII	AAGCTT	1 cut(s)	314
HinfI	GANTC	3 cut(s)	139, 1699, 1758
HpaII	CCGG	9 cut(s)	198, 490, 554, 646, 677, 798, 828, 1194, 1424
HphI	GGTGA	4 cut(s)	562, 842, 1304, 1568
Hpy166II	GTNNAC	6 cut(s)	524, 725, 1022, 1492, 1612, 1684
Hpy188I	TCNGA	9 cut(s)	425, 452, 533, 579, 716, 880, 979, 1235, 1666
Hpy188III	TCNNGA	7 cut(s)	32, 136, 305, 554, 1379, 1424, 1475
Hpy8I	GTNNAC	6 cut(s)	524, 725, 1022, 1492, 1612, 1684
HpyAV	CCTTC	1 cut(s)	1889
HpyCH4III	ACNGT	5 cut(s)	521, 1073, 1406, 1449, 1498
HpyCH4IV	ACGT	2 cut(s)	1003, 1374
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1073, 1774
HpyF3I	CTNAG	7 cut(s)	449, 530, 782, 1536, 1634, 1803, 1891
HpySE526I	ACGT	2 cut(s)	1003, 1374
Hsp92II	CATG	9 cut(s)	44, 475, 481, 505, 656, 755, 1218, 1757, 1876
HspAI	GCGC	2 cut(s)	786, 1197
Kpn2I	TCCGGA	2 cut(s)	553, 1423
Ksp22I	TGATCA	2 cut(s)	222, 262
LmnI	GCTCC	1 cut(s)	271
Lsp1109I	GCAGC	1 cut(s)	1348
LweI	GCATC	5 cut(s)	910, 983, 1353, 1468, 1658
MabI	ACCWGGT	1 cut(s)	174
MaeI	CTAG	1 cut(s)	1314
MaeII	ACGT	2 cut(s)	1003, 1374
MaeIII	GTNAC	6 cut(s)	70, 97, 1007, 1508, 1540, 1556
MboII	GAAGA	5 cut(s)	354, 815, 853, 992, 1561
MfeI	CAATTG	2 cut(s)	20, 1644
MflI	RGATCY	1 cut(s)	295
MhlI	GDGCHC	3 cut(s)	276, 396, 1770
MlsI	TGGCCA	2 cut(s)	476, 958
MluNI	TGGCCA	2 cut(s)	476, 958
MmeI	TCCRAC	2 cut(s)	785, 1087
Mox20I	TGGCCA	2 cut(s)	476, 958
MroI	TCCGGA	2 cut(s)	553, 1423
MroXI	GAANNNNTTC	2 cut(s)	848, 984
MscI	TGGCCA	2 cut(s)	476, 958
MseI	TTAA	4 cut(s)	594, 732, 1209, 1401
MslI	CAYNNNNRTG	1 cut(s)	476
Msp20I	TGGCCA	2 cut(s)	476, 958
MspI	CCGG	9 cut(s)	198, 490, 554, 646, 677, 798, 828, 1194, 1424
MspR9I	CCNGG	8 cut(s)	176, 292, 545, 647, 770, 1098, 1224, 1546
MunI	CAATTG	2 cut(s)	20, 1644
MvaI	CCWGG	7 cut(s)	176, 292, 545, 770, 1098, 1224, 1546
MwoI	GCNNNNNNNGC	2 cut(s)	1073, 1774
NciI	CCSGG	1 cut(s)	647
NcoI	CCATGG	1 cut(s)	477
NdeI	CATATG	1 cut(s)	1078
NlaIII	CATG	9 cut(s)	44, 475, 481, 505, 656, 755, 1218, 1757, 1876
NlaIV	GGNNCC	5 cut(s)	173, 297, 813, 1221, 1624
NmuCI	GTSAC	4 cut(s)	70, 97, 1508, 1556
NspI	RCATGY	1 cut(s)	505
PaeR7I	CTCGAG	1 cut(s)	134
PcsI	WCGNNNNNNNCGW	1 cut(s)	387
PdmI	GAANNNNTTC	2 cut(s)	848, 984
PfeI	GAWTC	3 cut(s)	139, 1699, 1758
PflFI	GACNNNGTC	1 cut(s)	76
PflMI	CCANNNNNTGG	1 cut(s)	544
PfoI	TCCNGGA	1 cut(s)	1096
PinAI	ACCGGT	1 cut(s)	827
PkrI	GCNGC	2 cut(s)	6, 1363
Ple19I	CGATCG	1 cut(s)	582
PpuMI	RGGWCCY	1 cut(s)	172
PsiI	TTATAA	1 cut(s)	1203
Psp124BI	GAGCTC	1 cut(s)	276
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	7 cut(s)	174, 290, 543, 768, 1096, 1222, 1544
PspEI	GGTNACC	1 cut(s)	1540
PspFI	CCCAGC	1 cut(s)	701
PspGI	CCWGG	7 cut(s)	174, 290, 543, 768, 1096, 1222, 1544
PspN4I	GGNNCC	5 cut(s)	173, 297, 813, 1221, 1624
PspPI	GGNCC	9 cut(s)	172, 725, 758, 854, 997, 1191, 1322, 1856, 1898
PspPPI	RGGWCCY	1 cut(s)	172
PstI	CTGCAG	1 cut(s)	1366
PsuI	RGATCY	1 cut(s)	295
PsyI	GACNNNGTC	1 cut(s)	76
PvuI	CGATCG	1 cut(s)	582
RsaI	GTAC	6 cut(s)	196, 232, 617, 623, 651, 1397
RsaNI	GTAC	6 cut(s)	195, 231, 616, 622, 650, 1396
RseI	CAYNNNNRTG	1 cut(s)	476
Rsr2I	CGGWCCG	1 cut(s)	1191
RsrII	CGGWCCG	1 cut(s)	1191
SacI	GAGCTC	1 cut(s)	276
SaqAI	TTAA	4 cut(s)	594, 732, 1209, 1401
SatI	GCNGC	2 cut(s)	5, 1362
Sau96I	GGNCC	9 cut(s)	172, 725, 758, 854, 997, 1191, 1322, 1856, 1898
ScaI	AGTACT	1 cut(s)	623
ScrFI	CCNGG	8 cut(s)	176, 292, 545, 647, 770, 1098, 1224, 1546
SduI	GDGCHC	3 cut(s)	276, 396, 1770
SexAI	ACCWGGT	1 cut(s)	174
SfaNI	GCATC	5 cut(s)	910, 983, 1353, 1468, 1658
SfcI	CTRYAG	2 cut(s)	1362, 1513
Sfr274I	CTCGAG	1 cut(s)	134
SgrAI	CRCCGGYG	1 cut(s)	676
SinI	GGWCC	6 cut(s)	172, 725, 758, 1191, 1856, 1898
SlaI	CTCGAG	1 cut(s)	134
SmiMI	CAYNNNNRTG	1 cut(s)	476
SmlI	CTYRAG	2 cut(s)	134, 303
SmoI	CTYRAG	2 cut(s)	134, 303
SsiI	CCGC	5 cut(s)	5, 482, 674, 1481, 1901
SspI	AATATT	2 cut(s)	213, 331
SspMI	CTAG	1 cut(s)	1314
SstI	GAGCTC	1 cut(s)	276
StyD4I	CCNGG	8 cut(s)	174, 290, 543, 645, 768, 1096, 1222, 1544
StyI	CCWWGG	1 cut(s)	477
TaaI	ACNGT	5 cut(s)	521, 1073, 1406, 1449, 1498
TaiI	ACGT	2 cut(s)	1006, 1377
TaqI	TCGA	6 cut(s)	135, 355, 582, 1354, 1678, 1788
TatI	WGTACW	2 cut(s)	621, 1395
TauI	GCSGC	1 cut(s)	7
TfiI	GAWTC	3 cut(s)	139, 1699, 1758
Tru1I	TTAA	4 cut(s)	594, 732, 1209, 1401
Tru9I	TTAA	4 cut(s)	594, 732, 1209, 1401
TscAI	CASTG	3 cut(s)	106, 673, 1858
TseFI	GTSAC	4 cut(s)	70, 97, 1508, 1556
TseI	GCWGC	1 cut(s)	1361
Tsp45I	GTSAC	4 cut(s)	70, 97, 1508, 1556
TspGWI	ACGGA	1 cut(s)	1204
TspRI	CASTG	3 cut(s)	106, 673, 1858
Tth111I	GACNNNGTC	1 cut(s)	76
Van91I	CCANNNNNTGG	1 cut(s)	544
VpaK11BI	GGWCC	6 cut(s)	172, 725, 758, 1191, 1856, 1898
XagI	CCTNNNNNAGG	1 cut(s)	1863
XapI	RAATTY	4 cut(s)	236, 818, 1592, 1798
XceI	RCATGY	1 cut(s)	505
XhoI	CTCGAG	1 cut(s)	134
XmiI	GTMKAC	2 cut(s)	1021, 1611
XmnI	GAANNNNTTC	2 cut(s)	848, 984
XspI	CTAG	1 cut(s)	1314
ZrmI	AGTACT	1 cut(s)	623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.