Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0008923

Physical Location & Seq

Genomic Coordinates Reverse (-)

26640920 .. 26645855

Gene Structure 4936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1205800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGCACCTATTGGGGTGCAATTGCTTGTCCAAGATGACCATGTAATGATGGATAATGGGATTGTCCAAGTGACGCTATCAAAGCCAGACGGAATCGTGACTGGAATCCGATACAATGGCATCGATAACTTGCTTGAAATTCGAAACGAGGAATCTAACAGAGGGTACTGGGACCTTGTTTGGAGTTCAGCAACTACTGGAACAACAGGAACATTTGATGTGATCAAAGGAACAAGCTTTACGGTTATAATGCAAAATGATGAACAGGTGGAGCTCTCTTTCACAAGAACCTGGGATCCCTCCCAAGAGGGACAACTCGTACCCTTAAATATTGATAAAAGGTTCATTATGCTTCGAGGGTGCTCAGGCTTCTACTCCTATGCCATTTACGAGCACTTGAAGGACTGGCCTGCTTTCCAGCTTGCAGAAACCAGAATTGCCTTCAAACTCCGGAAAGACAACTTTCACTATATGGCCATGGCGGACAATAGGCAAAGATACATGCCCTTGCCTGATGACCGTTTACCACCGAGAGGCCAAGCCCTGGCCTATCCGGAGGCAGTTCTTCTTGTCAATCCTGTGGAGCCGGAGTTTAAAGGAGAAGTGGATGACAAGTATCAATATTCATGTGACAACAAAGATAGCAAGGTACATGGATGGATATGCACCGAGCCACTGGTAGGGTTCTGGCTAATTACACCAAGCCAAGAGTTCCGATCCGGTGGACCCTTTAAACAAAACCTCACCTCCCATGTTGGCCCCACCACCCTTGCGGTGTTTCTAAGCGCACATTATTCTGGAGAAGATTTGGTGCCAAAATTTGCAGTTGGTGAGGAATGGAAGAAAGTTTTTGGGCCAGTTTTTATGTATGTTAATTCTGCATACGAAGGAAATGATCCACTTTCATTATGGGAGGATGCTAAATTACAGATGGTGATGGAAGTCCAGAGCTGGCCCTACAGCTTCCCAGCATCTGAGGATTTTCCCAAGTCACGCCAACGGGGTAATGTTAGGGGCCGACTACTTATTCAAGACAGATACGTTAGCGATGATTATGTATCCATCAATGGTGCATATGTTGGGTTAGCCCCGCCAGGAGACGTTGGATCGTGGCAAAGAGAGTGCAAGGACTATCAATTCTGGACCACAACCGATGAAGATGGCTACTTTTGCATCAACGGGGTACGCACCGGCGATTATAATCTGAATGCATCAGTCCCTGGTTTTATTGGAGATTATCATTACGATGTTGTTATGACTATAACCTCAGGTTGTGACATTGATATGGGTGATCTTGTATATAAGCCTCCCAGAGATGGCCCTACTTTATGGGAAATAGGCATTCCTGATCGTTCTGCTGCAGAGTTTTATGTTCCCGACCCTAATCCAAAGTACATCAACAAACTTTTTGTCAATCATCCTGACAGGTTTAGGCAGTACGGACTGTGGGAAAGATACTCAGAGTTATATTCTGATCAAGACTTGGTTTATACCGTAGGTGTCAGTGACTACAGTAAAGACTGGTTCTTTGCTCAGGTTACTAGGAAGAAAGATGATAATAAATATCAAGGAACTACTTGGCAAATTAAATTCAAACTTGAGAATGTAGACAAGACTGGTTCCTACAAGCTAAGAGTGGCACTTGCATCTGCAAATTATTCAGAGTTGCAGGTTTGGGTGAACGATCCAAAGGCAAATCGCCCTCTATTCACGAGCGGGATGATAGGGAAAGACAACTCAATAGCAAGGCATGGAATCCACGGGCTTTACTGGCTTTACAATGTAGACGTACCAAGCTCTCGGCTTGTCGAGGGAGACAACATTATCTATTTGACGCAACCAAGAAGCACAACAGGCCCTTTCCAGGGTATTATGTATGATTATCTTCGCTTAGAAGGTCCCCCATCTCCAAGCTCCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

641

Amino Acids

73.04

Weight (kDa)

5.05

Isoelectric Point (pI)

34.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	6 - 202	7.6e-99	Rhamnogalacturonate lyase family
fn3_3	PF14686	356 - 428	1.6e-23	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	442 - 631	5.3e-54	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09890 AT1G09890 AT1G09890 AT1G09890 AT1G09890
fragaria_vesca	FvH4_5g34111
malus_domestica	MD08G1205800.v1.1 MD15G1389300.v1.1
prunus_persica	Prupe.1G538300_v2.0.a1
pyrus_communis	pycom08g17790 pycom08g17800
rosa_chinensis	RchiOBHm_Chr7g0233621
rosa_laevigata	RLG00000001248
rosa_multiflora	Rmu_sc0003712.1_g000013
rosa_roxburghii	Rroxscaffold_3G00227110
rosa_rugosa	Rorug03G0282300 Rorug07G0062800 Rorug07G0281700
rosa_samantha	Rh7AG438200 Rh7BG410900 Rh7CG457800 Rh7DG427200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	248, 1200
Acc36I	ACCTGC	1 cut(s)	1660
AccB1I	GGYRCC	2 cut(s)	4, 811
AccB7I	CCANNNNNTGG	1 cut(s)	544
AccBSI	CCGCTC	1 cut(s)	1716
AccI	GTMKAC	2 cut(s)	1608, 1785
AccIII	TCCGGA	2 cut(s)	450, 553
AciI	CCGC	4 cut(s)	482, 773, 1091, 1716
AclWI	GGATC	6 cut(s)	290, 303, 711, 890, 1114, 1679
AcoI	YGGCCR	1 cut(s)	474
AcsI	RAATTY	3 cut(s)	138, 818, 1589
AfaI	GTAC	7 cut(s)	167, 321, 651, 1185, 1394, 1439, 1791
AfiI	CCNNNNNNNGG	6 cut(s)	533, 544, 680, 1316, 1864, 1865
AgsI	TTSAA	5 cut(s)	137, 400, 445, 1031, 1594
AjnI	CCWGG	5 cut(s)	290, 543, 1093, 1219, 1863
AloI	GAACNNNNNNTCC	2 cut(s)	280, 312
AluBI	AGCT	8 cut(s)	237, 274, 421, 951, 963, 1630, 1797, 1914
AluI	AGCT	8 cut(s)	237, 274, 421, 951, 963, 1630, 1797, 1914
Alw21I	GWGCWC	3 cut(s)	276, 365, 396
Alw26I	GTCTC	2 cut(s)	1092, 1809
AlwI	GGATC	6 cut(s)	290, 303, 711, 890, 1114, 1679
AlwNI	CAGNNNCTG	2 cut(s)	974, 1220
Aor13HI	TCCGGA	2 cut(s)	450, 553
ApeKI	GCWGC	1 cut(s)	1358
ApoI	RAATTY	3 cut(s)	138, 818, 1589
ArsI	GACNNNNNNTTYG	4 cut(s)	1395, 1427, 1511, 1543
AspLEI	GCGC	1 cut(s)	788
AsuHPI	GGTGA	5 cut(s)	736, 842, 946, 1301, 1690
AsuII	TTCGAA	1 cut(s)	142
AvaII	GGWCC	4 cut(s)	172, 725, 1143, 1898
AxyI	CCTNAGG	1 cut(s)	1267
BalI	TGGCCA	1 cut(s)	476
BamHI	GGATCC	1 cut(s)	295
BanI	GGYRCC	2 cut(s)	4, 811
BanII	GRGCYC	1 cut(s)	276
BauI	CACGAG	1 cut(s)	1711
Bbv12I	GWGCWC	3 cut(s)	276, 365, 396
BbvI	GCAGC	1 cut(s)	1345
BccI	CCATC	8 cut(s)	43, 651, 925, 931, 1070, 1154, 1310, 1912
BciT130I	CCWGG	5 cut(s)	292, 545, 1095, 1221, 1865
BciVI	GTATCC	1 cut(s)	1069
BclI	TGATCA	2 cut(s)	222, 1474
BcoDI	GTCTC	2 cut(s)	1092, 1809
BfaI	CTAG	1 cut(s)	1542
BfmI	CTRYAG	3 cut(s)	958, 1359, 1510
BfuAI	ACCTGC	1 cut(s)	1660
BfuI	GTATCC	1 cut(s)	1069
BisI	GCNGC	1 cut(s)	1359
BlsI	GCNGC	1 cut(s)	1360
Bme1390I	CCNGG	5 cut(s)	292, 545, 1095, 1221, 1865
Bme18I	GGWCC	4 cut(s)	172, 725, 1143, 1898
BmrFI	CCNGG	5 cut(s)	292, 545, 1095, 1221, 1865
BmrI	ACTGGG	1 cut(s)	178
BmsI	GCATC	6 cut(s)	129, 907, 980, 1182, 1220, 1655
BmuI	ACTGGG	1 cut(s)	178
BpmI	CTGGAG	1 cut(s)	819
Bpu10I	CCTNAGC	2 cut(s)	364, 1533
Bpu14I	TTCGAA	1 cut(s)	142
BpuEI	CTTGAG	1 cut(s)	1619
Bsa29I	ATCGAT	1 cut(s)	123
BsaBI	GATNNNNATC	1 cut(s)	1200
BsaJI	CCNNGG	6 cut(s)	291, 477, 543, 1219, 1759, 1864
BsaWI	WCCGGW	3 cut(s)	450, 553, 719
BsaXI	ACNNNNNCTCC	4 cut(s)	575, 605, 731, 761
Bsc4I	CCNNNNNNNGG	6 cut(s)	533, 544, 680, 1316, 1864, 1865
Bse118I	RCCGGY	1 cut(s)	1190
Bse1I	ACTGG	9 cut(s)	106, 173, 202, 410, 681, 857, 1526, 1621, 1775
Bse21I	CCTNAGG	1 cut(s)	1267
Bse8I	GATNNNNATC	1 cut(s)	1200
BseAI	TCCGGA	2 cut(s)	450, 553
BseBI	CCWGG	5 cut(s)	292, 545, 1095, 1221, 1865
BseCI	ATCGAT	1 cut(s)	123
BseDI	CCNNGG	6 cut(s)	291, 477, 543, 1219, 1759, 1864
BseGI	GGATG	5 cut(s)	613, 662, 922, 1417, 1725
BseJI	GATNNNNATC	1 cut(s)	1200
BseLI	CCNNNNNNNGG	6 cut(s)	533, 544, 680, 1316, 1864, 1865
BseMII	CTCAG	5 cut(s)	378, 966, 1281, 1473, 1547
BseNI	ACTGG	9 cut(s)	106, 173, 202, 410, 681, 857, 1526, 1621, 1775
BseXI	GCAGC	1 cut(s)	1345
BseYI	CCCAGC	1 cut(s)	967
BshNI	GGYRCC	2 cut(s)	4, 811
BshVI	ATCGAT	1 cut(s)	123
BsiHKAI	GWGCWC	3 cut(s)	276, 365, 396
BsiSI	CCGG	5 cut(s)	451, 554, 587, 720, 1191
BslFI	GGGAC	4 cut(s)	185, 324, 1202, 1884
BslI	CCNNNNNNNGG	6 cut(s)	533, 544, 680, 1316, 1864, 1865
BsmAI	GTCTC	2 cut(s)	1092, 1809
BsmBI	CGTCTC	1 cut(s)	1092
BsmFI	GGGAC	4 cut(s)	185, 324, 1202, 1884
BsmI	GAATGC	2 cut(s)	1213, 1341
Bsp119I	TTCGAA	1 cut(s)	142
Bsp1286I	GDGCHC	3 cut(s)	276, 365, 396
Bsp13I	TCCGGA	2 cut(s)	450, 553
Bsp143I	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
Bsp19I	CCATGG	1 cut(s)	477
BspACI	CCGC	4 cut(s)	482, 773, 1091, 1716
BspCNI	CTCAG	5 cut(s)	377, 967, 1280, 1472, 1546
BspDI	ATCGAT	1 cut(s)	123
BspEI	TCCGGA	2 cut(s)	450, 553
BspMAI	CTGCAG	1 cut(s)	1363
BspMI	ACCTGC	1 cut(s)	1660
BspPI	GGATC	6 cut(s)	290, 303, 711, 890, 1114, 1679
BspT104I	TTCGAA	1 cut(s)	142
BspT107I	GGYRCC	2 cut(s)	4, 811
BsrBI	CCGCTC	1 cut(s)	1716
BsrFI	RCCGGY	1 cut(s)	1190
BsrI	ACTGG	9 cut(s)	106, 173, 202, 410, 681, 857, 1526, 1621, 1775
BssAI	RCCGGY	1 cut(s)	1190
BssECI	CCNNGG	6 cut(s)	291, 477, 543, 1219, 1759, 1864
BssMI	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
BssSI	CACGAG	1 cut(s)	1711
BssT1I	CCWWGG	1 cut(s)	477
Bst2BI	CACGAG	1 cut(s)	1711
Bst2UI	CCWGG	5 cut(s)	292, 545, 1095, 1221, 1865
Bst4CI	ACNGT	5 cut(s)	244, 521, 1446, 1495, 1514
BstBI	TTCGAA	1 cut(s)	142
BstC8I	GCNNGC	3 cut(s)	411, 423, 953
BstDEI	CTNAG	8 cut(s)	364, 782, 975, 1267, 1459, 1533, 1631, 1891
BstDSI	CCRYGG	2 cut(s)	477, 1759
BstF5I	GGATG	5 cut(s)	613, 662, 922, 1417, 1725
BstHHI	GCGC	1 cut(s)	788
BstKTI	GATC	9 cut(s)	225, 298, 719, 898, 1109, 1294, 1351, 1477, 1687
BstMAI	GTCTC	2 cut(s)	1092, 1809
BstMBI	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
BstMWI	GCNNNNNNNGC	4 cut(s)	82, 1170, 1771, 1854
BstNI	CCWGG	5 cut(s)	292, 545, 1095, 1221, 1865
BstNSI	RCATGY	1 cut(s)	505
BstSCI	CCNGG	5 cut(s)	290, 543, 1093, 1219, 1863
BstSFI	CTRYAG	3 cut(s)	958, 1359, 1510
BstV1I	GCAGC	1 cut(s)	1345
BstX2I	RGATCY	1 cut(s)	295
BstYI	RGATCY	1 cut(s)	295
Bsu15I	ATCGAT	1 cut(s)	123
Bsu36I	CCTNAGG	1 cut(s)	1267
BsuI	GTATCC	1 cut(s)	1069
BsuTUI	ATCGAT	1 cut(s)	123
BtgI	CCRYGG	2 cut(s)	477, 1759
BtgZI	GCGATG	1 cut(s)	1062
BtsCI	GGATG	5 cut(s)	613, 662, 922, 1417, 1725
BtsIMutI	CAGTG	2 cut(s)	674, 1510
BveI	ACCTGC	1 cut(s)	1660
Cac8I	GCNNGC	3 cut(s)	411, 423, 953
CaiI	CAGNNNCTG	2 cut(s)	974, 1220
CfoI	GCGC	1 cut(s)	788
Cfr10I	RCCGGY	1 cut(s)	1190
ClaI	ATCGAT	1 cut(s)	123
CseI	GACGC	2 cut(s)	82, 1843
Csp6I	GTAC	7 cut(s)	166, 320, 650, 1184, 1393, 1438, 1790
CspCI	CAANNNNNGTGG	2 cut(s)	751, 786
CviAII	CATG	7 cut(s)	41, 478, 502, 627, 653, 752, 1751
CviQI	GTAC	7 cut(s)	166, 320, 650, 1184, 1393, 1438, 1790
DdeI	CTNAG	8 cut(s)	364, 782, 975, 1267, 1459, 1533, 1631, 1891
DpnI	GATC	9 cut(s)	224, 297, 718, 897, 1108, 1293, 1350, 1476, 1686
DpnII	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
DraI	TTTAAA	2 cut(s)	595, 733
EaeI	YGGCCR	1 cut(s)	474
EciI	GGCGGA	1 cut(s)	497
Ecl136II	GAGCTC	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	477
Eco24I	GRGCYC	1 cut(s)	276
Eco47I	GGWCC	4 cut(s)	172, 725, 1143, 1898
Eco53kI	GAGCTC	1 cut(s)	274
Eco81I	CCTNAGG	1 cut(s)	1267
EcoICRI	GAGCTC	1 cut(s)	274
EcoO109I	RGGNCCY	3 cut(s)	172, 1856, 1898
EcoRII	CCWGG	5 cut(s)	290, 543, 1093, 1219, 1863
EcoT14I	CCWWGG	1 cut(s)	477
EcoT22I	ATGCAT	1 cut(s)	1213
EcoT38I	GRGCYC	1 cut(s)	276
ErhI	CCWWGG	1 cut(s)	477
Esp3I	CGTCTC	1 cut(s)	1092
FaeI	CATG	7 cut(s)	44, 481, 505, 630, 656, 755, 1754
FaqI	GGGAC	4 cut(s)	185, 324, 1202, 1884
FatI	CATG	7 cut(s)	40, 477, 501, 626, 652, 751, 1750
FauI	CCCGC	2 cut(s)	1098, 1709
FauNDI	CATATG	1 cut(s)	1075
FbaI	TGATCA	2 cut(s)	222, 1474
FblI	GTMKAC	2 cut(s)	1608, 1785
Fnu4HI	GCNGC	1 cut(s)	1359
FokI	GGATG	5 cut(s)	620, 669, 929, 1404, 1732
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	1 cut(s)	1359
FspBI	CTAG	1 cut(s)	1542
GlaI	GCGC	1 cut(s)	787
GluI	GCNGC	1 cut(s)	1359
GsaI	CCCAGC	1 cut(s)	971
GsuI	CTGGAG	1 cut(s)	819
HapII	CCGG	5 cut(s)	451, 554, 587, 720, 1191
HgaI	GACGC	2 cut(s)	82, 1843
HhaI	GCGC	1 cut(s)	788
Hin1II	CATG	7 cut(s)	44, 481, 505, 630, 656, 755, 1754
Hin6I	GCGC	1 cut(s)	786
HinP1I	GCGC	1 cut(s)	786
HindIII	AAGCTT	1 cut(s)	235
HinfI	GANTC	4 cut(s)	93, 105, 152, 1755
HpaII	CCGG	5 cut(s)	451, 554, 587, 720, 1191
HphI	GGTGA	5 cut(s)	736, 842, 946, 1301, 1690
Hpy166II	GTNNAC	5 cut(s)	524, 725, 1609, 1681, 1786
Hpy188I	TCNGA	7 cut(s)	110, 716, 976, 1206, 1462, 1474, 1663
Hpy8I	GTNNAC	5 cut(s)	524, 725, 1609, 1681, 1786
HpyAV	CCTTC	4 cut(s)	394, 451, 881, 1889
HpyCH4III	ACNGT	5 cut(s)	244, 521, 1446, 1495, 1514
HpyCH4IV	ACGT	3 cut(s)	1041, 1101, 1788
HpyF10VI	GCNNNNNNNGC	4 cut(s)	82, 1170, 1771, 1854
HpyF3I	CTNAG	8 cut(s)	364, 782, 975, 1267, 1459, 1533, 1631, 1891
HpySE526I	ACGT	3 cut(s)	1041, 1101, 1788
Hsp92II	CATG	7 cut(s)	44, 481, 505, 630, 656, 755, 1754
HspAI	GCGC	1 cut(s)	786
Kpn2I	TCCGGA	2 cut(s)	450, 553
Ksp22I	TGATCA	2 cut(s)	222, 1474
Kzo9I	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
LmnI	GCTCC	3 cut(s)	271, 583, 1919
Lsp1109I	GCAGC	1 cut(s)	1345
LweI	GCATC	6 cut(s)	129, 907, 980, 1182, 1220, 1655
MaeI	CTAG	1 cut(s)	1542
MaeII	ACGT	3 cut(s)	1041, 1101, 1788
MaeIII	GTNAC	7 cut(s)	70, 97, 629, 990, 1274, 1505, 1537
MalI	GATC	9 cut(s)	224, 297, 718, 897, 1108, 1293, 1350, 1476, 1686
MbiI	CCGCTC	1 cut(s)	1716
MboI	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
MboII	GAAGA	6 cut(s)	557, 815, 853, 1169, 1558, 1877
MfeI	CAATTG	1 cut(s)	20
MflI	RGATCY	1 cut(s)	295
MhlI	GDGCHC	3 cut(s)	276, 365, 396
MlsI	TGGCCA	1 cut(s)	476
MluNI	TGGCCA	1 cut(s)	476
MmeI	TCCRAC	1 cut(s)	1084
Mox20I	TGGCCA	1 cut(s)	476
Mph1103I	ATGCAT	1 cut(s)	1213
MroI	TCCGGA	2 cut(s)	450, 553
MscI	TGGCCA	1 cut(s)	476
MseI	TTAA	5 cut(s)	326, 594, 732, 873, 1587
MslI	CAYNNNNRTG	2 cut(s)	1245, 1283
Msp20I	TGGCCA	1 cut(s)	476
MspI	CCGG	5 cut(s)	451, 554, 587, 720, 1191
MspR9I	CCNGG	5 cut(s)	292, 545, 1095, 1221, 1865
MunI	CAATTG	1 cut(s)	20
Mva1269I	GAATGC	2 cut(s)	1213, 1341
MvaI	CCWGG	5 cut(s)	292, 545, 1095, 1221, 1865
MwoI	GCNNNNNNNGC	4 cut(s)	82, 1170, 1771, 1854
NcoI	CCATGG	1 cut(s)	477
NdeI	CATATG	1 cut(s)	1075
NdeII	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
NlaIII	CATG	7 cut(s)	44, 481, 505, 630, 656, 755, 1754
NmeAIII	GCCGAG	1 cut(s)	1780
NmuCI	GTSAC	6 cut(s)	70, 97, 629, 990, 1274, 1505
NsiI	ATGCAT	1 cut(s)	1213
NspI	RCATGY	1 cut(s)	505
NspV	TTCGAA	1 cut(s)	142
PctI	GAATGC	2 cut(s)	1213, 1341
PfeI	GAWTC	4 cut(s)	93, 105, 152, 1755
PflMI	CCANNNNNTGG	1 cut(s)	544
PkrI	GCNGC	1 cut(s)	1360
PpuMI	RGGWCCY	2 cut(s)	172, 1898
PsiI	TTATAA	2 cut(s)	248, 1200
Psp124BI	GAGCTC	1 cut(s)	276
Psp5II	RGGWCCY	2 cut(s)	172, 1898
Psp6I	CCWGG	5 cut(s)	290, 543, 1093, 1219, 1863
PspFI	CCCAGC	1 cut(s)	967
PspGI	CCWGG	5 cut(s)	290, 543, 1093, 1219, 1863
PspPPI	RGGWCCY	2 cut(s)	172, 1898
PsrI	GAACNNNNNNTAC	2 cut(s)	223, 255
PstI	CTGCAG	1 cut(s)	1363
PstNI	CAGNNNCTG	2 cut(s)	974, 1220
PsuI	RGATCY	1 cut(s)	295
RsaI	GTAC	7 cut(s)	167, 321, 651, 1185, 1394, 1439, 1791
RsaNI	GTAC	7 cut(s)	166, 320, 650, 1184, 1393, 1438, 1790
RseI	CAYNNNNRTG	2 cut(s)	1245, 1283
SacI	GAGCTC	1 cut(s)	276
SaqAI	TTAA	5 cut(s)	326, 594, 732, 873, 1587
SatI	GCNGC	1 cut(s)	1359
Sau3AI	GATC	9 cut(s)	222, 295, 716, 895, 1106, 1291, 1348, 1474, 1684
ScrFI	CCNGG	5 cut(s)	292, 545, 1095, 1221, 1865
SduI	GDGCHC	3 cut(s)	276, 365, 396
SfaNI	GCATC	6 cut(s)	129, 907, 980, 1182, 1220, 1655
SfcI	CTRYAG	3 cut(s)	958, 1359, 1510
SfuI	TTCGAA	1 cut(s)	142
SgrAI	CRCCGGYG	1 cut(s)	1190
SinI	GGWCC	4 cut(s)	172, 725, 1143, 1898
SmiMI	CAYNNNNRTG	2 cut(s)	1245, 1283
SmlI	CTYRAG	1 cut(s)	1598
SmoI	CTYRAG	1 cut(s)	1598
SsiI	CCGC	4 cut(s)	482, 773, 1091, 1716
SspI	AATATT	2 cut(s)	331, 623
SspMI	CTAG	1 cut(s)	1542
SstI	GAGCTC	1 cut(s)	276
StyD4I	CCNGG	5 cut(s)	290, 543, 1093, 1219, 1863
StyI	CCWWGG	1 cut(s)	477
TaaI	ACNGT	5 cut(s)	244, 521, 1446, 1495, 1514
TaiI	ACGT	3 cut(s)	1044, 1104, 1791
TaqI	TCGA	4 cut(s)	123, 142, 355, 1809
TatI	WGTACW	1 cut(s)	1392
TfiI	GAWTC	4 cut(s)	93, 105, 152, 1755
Tru1I	TTAA	5 cut(s)	326, 594, 732, 873, 1587
Tru9I	TTAA	5 cut(s)	326, 594, 732, 873, 1587
TscAI	CASTG	2 cut(s)	681, 1510
TseFI	GTSAC	6 cut(s)	70, 97, 629, 990, 1274, 1505
TseI	GCWGC	1 cut(s)	1358
Tsp45I	GTSAC	6 cut(s)	70, 97, 629, 990, 1274, 1505
TspDTI	ATGAA	5 cut(s)	276, 334, 615, 894, 1170
TspGWI	ACGGA	2 cut(s)	105, 1455
TspRI	CASTG	2 cut(s)	681, 1510
Van91I	CCANNNNNTGG	1 cut(s)	544
VpaK11BI	GGWCC	4 cut(s)	172, 725, 1143, 1898
XapI	RAATTY	3 cut(s)	138, 818, 1589
XceI	RCATGY	1 cut(s)	505
XcmI	CCANNNNNNNNNTGG	1 cut(s)	906
XmiI	GTMKAC	2 cut(s)	1608, 1785
XspI	CTAG	1 cut(s)	1542
Zsp2I	ATGCAT	1 cut(s)	1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.