Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005698

Physical Location & Seq

Genomic Coordinates Forward (+)

28931052 .. 28939644

Gene Structure 8593 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g39210.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGAGGGGGAGGATGTGCCTCTGGACGACAAGGCGAAGAGAATGCGGGATCTGCTATCGAGCTTCTACTCTCCAGATCCTTCAATGTCGTCCCCAAACTCCAATTCGTCTTCCAAAAACGTCACTCTCGACGCCATCAACTCCACCTCCTTCGATCCCGATCAGTACATGAATCTTCTCGTTCATAAGTCAAACTTGGAAGGGCTTCTACAGAAGCATGTTGAAATGGCTGCTGAGATCAAGAATCTTGACACCGACTTACAGATGTTAGTTTATGAGAACTACAACAAGTTTATCAGCGCAACCGATACAATTAAACAGATGAAAAGTAATATCGTGGGCATGGAGGCAAACATGGAGCAGCTGCTTGAGAAGATATTGTCTGTGCAATCTAGAAGTGATAGTGTCAACACTTCTCTTTTTGAAAGGAGAGAACGTATAGAGAAATTGCATCGTACCCGCAATCTTCTTCGTAAGCTTCAGTTCATATATGATCTACCTGCTAGACTCACAAAGTGTATCAAATCAGAAGCATATGCTGATGCAGTCAAGTTCTATACTGGTGCAATGCCAATTTTTAAAGATTGTAAGCGAGCATCTGAAGAAGTTGTGGCCATAATTATAAAGAATTTGCAGGGAAAGCTTTTCTCAGATTCTGAATCCATCCAAGCAAGAGCTGAGGCTGCTGTGCTTCTCAAGCGACTGGATTTCCCAGTTGATAGCTTAAAGGTGAAACTGCTTGAGAAGTTGGAACAGTCTGTTGCCGACCTGCAGCTTAACATTGAAGAGGTTGGTAATGCTTCAGTTGATTCAAATCACCCTTCTACTGATTCAACTCCTGCCACTGCTCATGAGGTCTCTGTTCGTGAGTTTGCGGAGGCTATTCGTGCTTATCGAGCAATATTTCCTGATTCAGATAACCAACTAAGCAAACTTGCACAAGACTTGGTTACCAGGCACTTTGAAACCACTGAGCACTACATAAAGCAACAAGTTTGGTCAGCAGATCTACTAGCTGTAATTCGAATTATATGGAAAGATGTACTTCTGTTGGAAGATGTGCTACATGAGGCTGCTCTAACTGATTATTCTTTTGAGGCTGCCCAAGTTTCTGTCAAATTCTATGTTGCCAATAAATTTTCTCATCTCCAAAGTGAGATATCAGATGCTCTAAAAAAGGTCCAAATTAGACAAAAAAATAGCGGAGAAGATAATTCCTTACAAGTTGCTCTCGAGGGCGGAAAAAAGGCAGTTCTCCAAGGCAGCATGAATGTCTTACTGGACTTCCGTCAACTTCTGGATGATGATTTGGGACTGCTAGTTAAACTGAGAGACTTAATTATTGATTGGGTCCAAGAAGGGTTTCAGGAATTCTTCAGGGCACTTGATGGTCACTTCCTCTTGCTATCAGGCAGGCATAGTTTAGCCAGTCAAGATCAGGGTTTGACAGAGGGAATACTAGATGACAAAGTTCTGGCAGGGCTTGTCCTTGTGCTGGCCCAAATTTCGCTTTTCATAGAACAGAATGCCATCCCAAGAATCACTGAGGAAATAGGTGCTTCCTTTTCTGGTGGTGGTGTCAGACGCTATGAATATGGACCAGCCTTTGTTCCTGGGGAGATCTGTCGGATATTCCGATCAGCTGGTGAAAAGTTTCTGCACCTTTACATAAAAATGACAACTCAAAGGATATCAGTTCTCCAAAAGAGGAAGTTTACAGCAACAGTTTGGGTCAAGCACAAGGAACCACGAGAAGTTAGCATGTTTGTTGATTTATTTCTTCACGAGTTGGAAGGAATAGGGAGAGAGGTTAAGCAGATTTTACCTGAAGGCCTCCGCAGACATCGTAGGGCTGACAGCACTGGGAGCACTACCTCATCACGGAGTAATCCATTACGTGAGGAGAAATTGAGTCGGTCAAATACACAAAGGGCAAGGAGCCAGCTACTGGAAACCCATCTAGCAAAGTTGTTCAAGCAAAAAGTTGAAATTTTTACAAAAGTGGAGTTTACACAGGGTTCAGTTTTAACAACAGTGGTAAAACTTGGTCTTAAAAGCTTGCAAGAATTTGTCAGACTCCAAACTTTTAGTCGAAGTGGATTCCAGCAAGTTCAGTTGGACATTCAGTTTATGAGGACTCCTTTAAAGGAAATGGCTGAAGATGAAGCTGCCATTGACTTTTTACTGGATGAGGTGGTTGTTGCAACTGCGGAGCGTTGTCTTGACCCAACTCCATTAGAGCCCCCCATCTTGGACAGACTTATACAAGCAAAGTTGGCAAAAACCAGGGAACAGAATCCACTTTCTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000938 GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006810 GO:0006914 GO:0007034 GO:0007041 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010051 GO:0010305 GO:0012505 GO:0016192 GO:0016197 GO:0016482 GO:0031410 GO:0031982 GO:0032456 GO:0032501 GO:0032502 GO:0032991 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055037 GO:0061919 GO:0097708 GO:0099023 GO:1990745

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps51

Protein Analysis

771

Amino Acids

87.18

Weight (kDa)

6.06

Isoelectric Point (pI)

46.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec5	PF15469	36 - 195	2.5e-17	Exocyst complex component Sec5
VPS51_Exo84_N	PF08700	46 - 130	1e-22	Vps51/EXO84/COG1 N-terminal
Dor1	PF04124	63 - 351	7.7e-12	Dor1-like family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02030 AT4G02030
fragaria_vesca	FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210
malus_domestica	MD03G1295300.v1.1
prunus_persica	Prupe.5G007800_v2.0.a1 Prupe.5G007800_v2.0.a1
pyrus_communis	pycom01g04460
rosa_chinensis	RchiOBHm_Chr7g0241471
rosa_laevigata	RLG00000000578
rosa_multiflora	Rmu_sc0040921.1_g000003
rosa_roxburghii	Rroxscaffold_3G00219100
rosa_rugosa	Rorug07G0344000 Rorug07G0344100 Rorug07G0344200
rosa_samantha	Rh7AG498800 Rh7BG469400 Rh7CG515700 Rh7DG483500
rosa_wichuraiana	Rw7G042130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	623
Acc36I	ACCTGC	2 cut(s)	508, 777
AccB7I	CCANNNNNTGG	1 cut(s)	1948
AciI	CCGC	7 cut(s)	46, 460, 875, 1203, 1239, 1837, 2210
AclWI	GGATC	3 cut(s)	57, 71, 149
AcoI	YGGCCR	1 cut(s)	612
AcsI	RAATTY	7 cut(s)	628, 1118, 1136, 1370, 1503, 1989, 2066
AcuI	CTGAAG	6 cut(s)	464, 621, 786, 1360, 1848, 2178
AcyI	GRCGYC	1 cut(s)	132
AdeI	CACNNNGTG	1 cut(s)	516
AfaI	GTAC	3 cut(s)	167, 457, 1044
AfiI	CCNNNNNNNGG	4 cut(s)	1495, 1881, 1948, 2251
AgsI	TTSAA	9 cut(s)	84, 224, 425, 785, 813, 834, 965, 1975, 1988
AjnI	CCWGG	3 cut(s)	953, 1612, 2285
AjuI	GAANNNNNNNTTGG	4 cut(s)	88, 120, 1347, 1379
Alw21I	GWGCWC	2 cut(s)	978, 1871
Alw26I	GTCTC	2 cut(s)	862, 1326
AlwI	GGATC	3 cut(s)	57, 71, 149
AlwNI	CAGNNNCTG	2 cut(s)	656, 1948
Ama87I	CYCGRG	1 cut(s)	1232
AoxI	GGCC	3 cut(s)	612, 1497, 1831
ApeKI	GCWGC	9 cut(s)	230, 361, 364, 683, 772, 1073, 1100, 1263, 2168
ApoI	RAATTY	7 cut(s)	628, 1118, 1136, 1370, 1503, 1989, 2066
ArsI	GACNNNNNNTTYG	2 cut(s)	2074, 2106
Asp700I	GAANNNNTTC	3 cut(s)	204, 1362, 1653
AspLEI	GCGC	1 cut(s)	302
AspS9I	GGNCC	4 cut(s)	1180, 1351, 1498, 1598
AsuHPI	GGTGA	3 cut(s)	742, 809, 1658
AsuII	TTCGAA	1 cut(s)	1024
AvaI	CYCGRG	1 cut(s)	1232
AvaII	GGWCC	3 cut(s)	1180, 1351, 1598
BaeGI	GKGCMC	1 cut(s)	1384
BalI	TGGCCA	1 cut(s)	614
BanII	GRGCYC	1 cut(s)	2244
BarI	GAAGNNNNNNTAC	4 cut(s)	192, 224, 1047, 1079
BauI	CACGAG	2 cut(s)	1749, 1784
BbsI	GAAGAC	1 cut(s)	102
Bbv12I	GWGCWC	2 cut(s)	978, 1871
BbvCI	CCTCAGC	1 cut(s)	678
BbvI	GCAGC	9 cut(s)	217, 351, 373, 670, 784, 1060, 1087, 1275, 2155
BccI	CCATC	6 cut(s)	143, 671, 1382, 1538, 1965, 2255
BcgI	CGANNNNNNTGC	2 cut(s)	25, 59
BciT130I	CCWGG	3 cut(s)	955, 1614, 2287
BcoDI	GTCTC	2 cut(s)	862, 1326
BfaI	CTAG	6 cut(s)	393, 504, 1013, 1319, 1460, 1961
BfmI	CTRYAG	2 cut(s)	209, 770
BfuAI	ACCTGC	2 cut(s)	508, 777
BglII	AGATCT	2 cut(s)	1006, 1620
BisI	GCNGC	9 cut(s)	231, 362, 365, 684, 773, 1074, 1101, 1264, 2169
BlsI	GCNGC	9 cut(s)	232, 363, 366, 685, 774, 1075, 1102, 1265, 2170
Bme1390I	CCNGG	3 cut(s)	955, 1614, 2287
Bme18I	GGWCC	3 cut(s)	1180, 1351, 1598
BmeT110I	CYCGRG	1 cut(s)	1232
BmgT120I	GGNCC	4 cut(s)	1180, 1351, 1498, 1598
BmiI	GGNNCC	3 cut(s)	1352, 1746, 1940
BmrFI	CCNGG	3 cut(s)	955, 1614, 2287
BmrI	ACTGGG	2 cut(s)	707, 1872
BmsI	GCATC	4 cut(s)	460, 532, 605, 1156
BmuI	ACTGGG	2 cut(s)	707, 1872
BoxI	GACNNNNGTC	1 cut(s)	1287
BpiI	GAAGAC	1 cut(s)	102
BpmI	CTGGAG	1 cut(s)	57
Bpu10I	CCTNAGC	1 cut(s)	678
Bpu14I	TTCGAA	1 cut(s)	1024
BpuEI	CTTGAG	3 cut(s)	389, 680, 761
BsaAI	YACGTR	1 cut(s)	1898
BsaBI	GATNNNNATC	2 cut(s)	159, 813
BsaHI	GRCGYC	1 cut(s)	132
BsaI	GGTCTC	1 cut(s)	862
BsaJI	CCNNGG	3 cut(s)	1258, 1613, 2286
BsaXI	ACNNNNNCTCC	4 cut(s)	131, 161, 421, 451
Bsc4I	CCNNNNNNNGG	4 cut(s)	1495, 1881, 1948, 2251
Bse1I	ACTGG	8 cut(s)	565, 708, 713, 1284, 1428, 1867, 1953, 2190
Bse3DI	GCAATG	1 cut(s)	573
Bse8I	GATNNNNATC	2 cut(s)	159, 813
BseBI	CCWGG	3 cut(s)	955, 1614, 2287
BseDI	CCNNGG	3 cut(s)	1258, 1613, 2286
BseGI	GGATG	5 cut(s)	19, 663, 1306, 1530, 2194
BseJI	GATNNNNATC	2 cut(s)	159, 813
BseLI	CCNNNNNNNGG	4 cut(s)	1495, 1881, 1948, 2251
BseMI	GCAATG	1 cut(s)	573
BseMII	CTCAG	6 cut(s)	225, 663, 669, 963, 1319, 1536
BseNI	ACTGG	8 cut(s)	565, 708, 713, 1284, 1428, 1867, 1953, 2190
BseRI	GAGGAG	1 cut(s)	1916
BseSI	GKGCMC	1 cut(s)	1384
BseXI	GCAGC	9 cut(s)	217, 351, 373, 670, 784, 1060, 1087, 1275, 2155
BsgI	GTGCAG	1 cut(s)	1643
BshFI	GGCC	3 cut(s)	614, 1499, 1833
BsiHKAI	GWGCWC	2 cut(s)	978, 1871
BsiHKCI	CYCGRG	1 cut(s)	1232
BslFI	GGGAC	2 cut(s)	76, 1326
BslI	CCNNNNNNNGG	4 cut(s)	1495, 1881, 1948, 2251
BsmAI	GTCTC	2 cut(s)	862, 1326
BsmFI	GGGAC	2 cut(s)	76, 1326
BsmI	GAATGC	2 cut(s)	48, 1531
BsnI	GGCC	3 cut(s)	614, 1499, 1833
Bso31I	GGTCTC	1 cut(s)	862
BsoBI	CYCGRG	1 cut(s)	1232
Bsp119I	TTCGAA	1 cut(s)	1024
Bsp1286I	GDGCHC	4 cut(s)	978, 1384, 1871, 2244
BspACI	CCGC	7 cut(s)	46, 460, 875, 1203, 1239, 1837, 2210
BspANI	GGCC	3 cut(s)	614, 1499, 1833
BspCNI	CTCAG	6 cut(s)	226, 662, 670, 964, 1320, 1537
BspHI	TCATGA	1 cut(s)	850
BspLI	GGNNCC	3 cut(s)	1352, 1746, 1940
BspMAI	CTGCAG	1 cut(s)	774
BspMI	ACCTGC	2 cut(s)	508, 777
BspPI	GGATC	3 cut(s)	57, 71, 149
BspT104I	TTCGAA	1 cut(s)	1024
BspTNI	GGTCTC	1 cut(s)	862
BsrDI	GCAATG	1 cut(s)	573
BsrI	ACTGG	8 cut(s)	565, 708, 713, 1284, 1428, 1867, 1953, 2190
BssECI	CCNNGG	3 cut(s)	1258, 1613, 2286
BssNI	GRCGYC	1 cut(s)	132
BssSI	CACGAG	2 cut(s)	1749, 1784
BssT1I	CCWWGG	1 cut(s)	1258
Bst2BI	CACGAG	2 cut(s)	1749, 1784
Bst2UI	CCWGG	3 cut(s)	955, 1614, 2287
Bst4CI	ACNGT	3 cut(s)	756, 1726, 2035
Bst6I	CTCTTC	2 cut(s)	32, 780
BstACI	GRCGYC	1 cut(s)	132
BstBAI	YACGTR	1 cut(s)	1898
BstBI	TTCGAA	1 cut(s)	1024
BstC8I	GCNNGC	5 cut(s)	594, 1415, 1497, 1943, 2060
BstDEI	CTNAG	7 cut(s)	234, 649, 678, 926, 972, 1328, 1545
BstEII	GGTNACC	1 cut(s)	949
BstF5I	GGATG	5 cut(s)	19, 663, 1306, 1530, 2194
BstHHI	GCGC	1 cut(s)	302
BstMAI	GTCTC	2 cut(s)	862, 1326
BstMWI	GCNNNNNNNGC	8 cut(s)	52, 640, 683, 697, 887, 896, 1866, 2276
BstNI	CCWGG	3 cut(s)	955, 1614, 2287
BstNSI	RCATGY	2 cut(s)	221, 1765
BstPAI	GACNNNNGTC	1 cut(s)	1287
BstPI	GGTNACC	1 cut(s)	949
BstSCI	CCNGG	3 cut(s)	953, 1612, 2285
BstSFI	CTRYAG	2 cut(s)	209, 770
BstSLI	GKGCMC	1 cut(s)	1384
BstV1I	GCAGC	9 cut(s)	217, 351, 373, 670, 784, 1060, 1087, 1275, 2155
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	4 cut(s)	49, 76, 1006, 1620
BstYI	RGATCY	4 cut(s)	49, 76, 1006, 1620
BsuRI	GGCC	3 cut(s)	614, 1499, 1833
BtsCI	GGATG	5 cut(s)	19, 663, 1306, 1530, 2194
BtsI	GCAGTG	1 cut(s)	843
BtsIMutI	CAGTG	5 cut(s)	843, 969, 1542, 1860, 2040
BveI	ACCTGC	2 cut(s)	508, 777
Cac8I	GCNNGC	5 cut(s)	594, 1415, 1497, 1943, 2060
CaiI	CAGNNNCTG	2 cut(s)	656, 1948
CciI	TCATGA	1 cut(s)	850
CfoI	GCGC	1 cut(s)	302
Cfr13I	GGNCC	4 cut(s)	1180, 1351, 1498, 1598
CseI	GACGC	2 cut(s)	140, 1593
Csp6I	GTAC	3 cut(s)	166, 456, 1043
CviAII	CATG	9 cut(s)	169, 218, 343, 355, 851, 1067, 1267, 1762, 2310
CviQI	GTAC	3 cut(s)	166, 456, 1043
DdeI	CTNAG	7 cut(s)	234, 649, 678, 926, 972, 1328, 1545
DraI	TTTAAA	2 cut(s)	580, 2145
DraIII	CACNNNGTG	1 cut(s)	516
EaeI	YGGCCR	1 cut(s)	612
Eam1104I	CTCTTC	2 cut(s)	32, 780
EarI	CTCTTC	2 cut(s)	32, 780
EciI	GGCGGA	1 cut(s)	1254
Eco130I	CCWWGG	1 cut(s)	1258
Eco147I	AGGCCT	1 cut(s)	1833
Eco24I	GRGCYC	1 cut(s)	2244
Eco31I	GGTCTC	1 cut(s)	862
Eco32I	GATATC	2 cut(s)	1161, 1692
Eco47I	GGWCC	3 cut(s)	1180, 1351, 1598
Eco57I	CTGAAG	6 cut(s)	464, 621, 786, 1360, 1848, 2178
Eco88I	CYCGRG	1 cut(s)	1232
Eco91I	GGTNACC	1 cut(s)	949
EcoO65I	GGTNACC	1 cut(s)	949
EcoRI	GAATTC	1 cut(s)	1370
EcoRII	CCWGG	3 cut(s)	953, 1612, 2285
EcoRV	GATATC	2 cut(s)	1161, 1692
EcoT14I	CCWWGG	1 cut(s)	1258
EcoT38I	GRGCYC	1 cut(s)	2244
ErhI	CCWWGG	1 cut(s)	1258
FaeI	CATG	9 cut(s)	172, 221, 346, 358, 854, 1070, 1270, 1765, 2313
FalI	AAGNNNNNCTT	4 cut(s)	179, 211, 1029, 1061
FaqI	GGGAC	2 cut(s)	76, 1326
FatI	CATG	9 cut(s)	168, 217, 342, 354, 850, 1066, 1266, 1761, 2309
FauI	CCCGC	2 cut(s)	39, 467
FauNDI	CATATG	1 cut(s)	535
Fnu4HI	GCNGC	9 cut(s)	231, 362, 365, 684, 773, 1074, 1101, 1264, 2169
FokI	GGATG	5 cut(s)	26, 650, 1313, 1517, 2201
FriOI	GRGCYC	1 cut(s)	2244
Fsp4HI	GCNGC	9 cut(s)	231, 362, 365, 684, 773, 1074, 1101, 1264, 2169
FspBI	CTAG	6 cut(s)	393, 504, 1013, 1319, 1460, 1961
GlaI	GCGC	1 cut(s)	301
GluI	GCNGC	9 cut(s)	231, 362, 365, 684, 773, 1074, 1101, 1264, 2169
GsuI	CTGGAG	1 cut(s)	57
HaeIII	GGCC	3 cut(s)	614, 1499, 1833
HgaI	GACGC	2 cut(s)	140, 1593
HhaI	GCGC	1 cut(s)	302
Hin1I	GRCGYC	1 cut(s)	132
Hin1II	CATG	9 cut(s)	172, 221, 346, 358, 854, 1070, 1270, 1765, 2313
Hin6I	GCGC	1 cut(s)	300
HinP1I	GCGC	1 cut(s)	300
HincII	GTYRAC	2 cut(s)	409, 1292
HindII	GTYRAC	2 cut(s)	409, 1292
HindIII	AAGCTT	3 cut(s)	476, 641, 2056
HphI	GGTGA	3 cut(s)	742, 809, 1658
Hpy166II	GTNNAC	4 cut(s)	409, 1292, 1716, 2010
Hpy8I	GTNNAC	4 cut(s)	409, 1292, 1716, 2010
Hpy99I	CGWCG	1 cut(s)	134
HpyAV	CCTTC	7 cut(s)	90, 160, 194, 831, 1352, 1787, 1823
HpyCH4III	ACNGT	3 cut(s)	756, 1726, 2035
HpyCH4IV	ACGT	3 cut(s)	120, 436, 1897
HpyF10VI	GCNNNNNNNGC	8 cut(s)	52, 640, 683, 697, 887, 896, 1866, 2276
HpyF3I	CTNAG	7 cut(s)	234, 649, 678, 926, 972, 1328, 1545
HpySE526I	ACGT	3 cut(s)	120, 436, 1897
Hsp92I	GRCGYC	1 cut(s)	132
Hsp92II	CATG	9 cut(s)	172, 221, 346, 358, 854, 1070, 1270, 1765, 2313
HspAI	GCGC	1 cut(s)	300
LmnI	GCTCC	4 cut(s)	358, 1866, 1938, 2212
Lsp1109I	GCAGC	9 cut(s)	217, 351, 373, 670, 784, 1060, 1087, 1275, 2155
LweI	GCATC	4 cut(s)	460, 532, 605, 1156
MaeI	CTAG	6 cut(s)	393, 504, 1013, 1319, 1460, 1961
MaeII	ACGT	3 cut(s)	120, 436, 1897
MaeIII	GTNAC	3 cut(s)	121, 949, 1391
MflI	RGATCY	4 cut(s)	49, 76, 1006, 1620
MhlI	GDGCHC	4 cut(s)	978, 1384, 1871, 2244
MlsI	TGGCCA	1 cut(s)	614
MluNI	TGGCCA	1 cut(s)	614
MlyI	GAGTC	4 cut(s)	501, 1921, 2070, 2131
MmeI	TCCRAC	5 cut(s)	729, 1032, 1607, 1770, 2097
Mox20I	TGGCCA	1 cut(s)	614
MroXI	GAANNNNTTC	3 cut(s)	204, 1362, 1653
MscI	TGGCCA	1 cut(s)	614
MslI	CAYNNNNRTG	1 cut(s)	1673
Msp20I	TGGCCA	1 cut(s)	614
MspA1I	CMGCKG	2 cut(s)	364, 1643
MspR9I	CCNGG	3 cut(s)	955, 1614, 2287
Mva1269I	GAATGC	2 cut(s)	48, 1531
MvaI	CCWGG	3 cut(s)	955, 1614, 2287
MwoI	GCNNNNNNNGC	8 cut(s)	52, 640, 683, 697, 887, 896, 1866, 2276
NdeI	CATATG	1 cut(s)	535
NlaIII	CATG	9 cut(s)	172, 221, 346, 358, 854, 1070, 1270, 1765, 2313
NlaIV	GGNNCC	3 cut(s)	1352, 1746, 1940
NmuCI	GTSAC	2 cut(s)	121, 1391
NspI	RCATGY	2 cut(s)	221, 1765
NspV	TTCGAA	1 cut(s)	1024
PaeR7I	CTCGAG	1 cut(s)	1232
PagI	TCATGA	1 cut(s)	850
PceI	AGGCCT	1 cut(s)	1833
PcsI	WCGNNNNNNNCGW	3 cut(s)	126, 892, 1633
PctI	GAATGC	2 cut(s)	48, 1531
PdmI	GAANNNNTTC	3 cut(s)	204, 1362, 1653
PflMI	CCANNNNNTGG	1 cut(s)	1948
PkrI	GCNGC	9 cut(s)	232, 363, 366, 685, 774, 1075, 1102, 1265, 2170
PleI	GAGTC	4 cut(s)	501, 1920, 2070, 2131
PpsI	GAGTC	4 cut(s)	501, 1920, 2070, 2131
Ppu21I	YACGTR	1 cut(s)	1898
PshAI	GACNNNNGTC	1 cut(s)	1287
PsiI	TTATAA	1 cut(s)	623
Psp6I	CCWGG	3 cut(s)	953, 1612, 2285
PspEI	GGTNACC	1 cut(s)	949
PspGI	CCWGG	3 cut(s)	953, 1612, 2285
PspN4I	GGNNCC	3 cut(s)	1352, 1746, 1940
PspPI	GGNCC	4 cut(s)	1180, 1351, 1498, 1598
PstI	CTGCAG	1 cut(s)	774
PstNI	CAGNNNCTG	2 cut(s)	656, 1948
PsuI	RGATCY	4 cut(s)	49, 76, 1006, 1620
PvuII	CAGCTG	2 cut(s)	364, 1643
RsaI	GTAC	3 cut(s)	167, 457, 1044
RsaNI	GTAC	3 cut(s)	166, 456, 1043
RseI	CAYNNNNRTG	1 cut(s)	1673
SatI	GCNGC	9 cut(s)	231, 362, 365, 684, 773, 1074, 1101, 1264, 2169
Sau96I	GGNCC	4 cut(s)	1180, 1351, 1498, 1598
SchI	GAGTC	4 cut(s)	501, 1921, 2070, 2131
ScrFI	CCNGG	3 cut(s)	955, 1614, 2287
SduI	GDGCHC	4 cut(s)	978, 1384, 1871, 2244
SfaNI	GCATC	4 cut(s)	460, 532, 605, 1156
SfcI	CTRYAG	2 cut(s)	209, 770
Sfr274I	CTCGAG	1 cut(s)	1232
SfuI	TTCGAA	1 cut(s)	1024
SinI	GGWCC	3 cut(s)	1180, 1351, 1598
SlaI	CTCGAG	1 cut(s)	1232
SmiMI	CAYNNNNRTG	1 cut(s)	1673
SmlI	CTYRAG	4 cut(s)	368, 695, 740, 1232
SmoI	CTYRAG	4 cut(s)	368, 695, 740, 1232
SseBI	AGGCCT	1 cut(s)	1833
SsiI	CCGC	7 cut(s)	46, 460, 875, 1203, 1239, 1837, 2210
SspI	AATATT	1 cut(s)	903
SspMI	CTAG	6 cut(s)	393, 504, 1013, 1319, 1460, 1961
StuI	AGGCCT	1 cut(s)	1833
StyD4I	CCNGG	3 cut(s)	953, 1612, 2285
StyI	CCWWGG	1 cut(s)	1258
TaaI	ACNGT	3 cut(s)	756, 1726, 2035
TaiI	ACGT	3 cut(s)	123, 439, 1900
TaqI	TCGA	7 cut(s)	59, 129, 153, 895, 1024, 1233, 2092
TaqII	GACCGA	1 cut(s)	1905
TatI	WGTACW	2 cut(s)	165, 1042
TscAI	CASTG	5 cut(s)	850, 976, 1549, 1867, 2040
TseFI	GTSAC	2 cut(s)	121, 1391
TseI	GCWGC	9 cut(s)	230, 361, 364, 683, 772, 1073, 1100, 1263, 2168
Tsp45I	GTSAC	2 cut(s)	121, 1391
TspDTI	ATGAA	8 cut(s)	173, 185, 338, 475, 1283, 1504, 1605, 2178
TspGWI	ACGGA	2 cut(s)	1277, 1897
TspRI	CASTG	5 cut(s)	850, 976, 1549, 1867, 2040
Van91I	CCANNNNNTGG	1 cut(s)	1948
VpaK11BI	GGWCC	3 cut(s)	1180, 1351, 1598
XapI	RAATTY	7 cut(s)	628, 1118, 1136, 1370, 1503, 1989, 2066
XbaI	TCTAGA	1 cut(s)	392
XceI	RCATGY	2 cut(s)	221, 1765
XhoI	CTCGAG	1 cut(s)	1232
XmnI	GAANNNNTTC	3 cut(s)	204, 1362, 1653
XspI	CTAG	6 cut(s)	393, 504, 1013, 1319, 1460, 1961

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.