Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0040921.1

Orthogroup ID

OG0005698

Physical Location & Seq

Genomic Coordinates Reverse (-)

16386 .. 25567

Gene Structure 9182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0040921.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

atggaggtggaaggtgtgcctctggacgacaaggcgaagagaatgagggatctgctatcgagcttctactctccagatccttcaatgtcgtccccaaactccaattcatcttccaagtacctcaccctcgacgccatcaacaccacctccttcgatcccgatcagtacatgaatcttctcgtacataagtcaaacttggaagggcttctacagagacatgttgaaatggctgctgagataaagaatcttgacactgacttacaaatgttagtttatgagaactacaacaagtttatcagcgcaacagatacaattaaacagatgaaaagtaatatcgtgggcatggaggcaaacatggaacagctgcttgataagataatgtccgtgcaatctaggagtgatggggtcaacacttctctttttgaaaagagagaacacatagagaaattgcatcgtacgcggaatcttcttcgtaagcttcagttcatatacgatctacctgctagacttgcaaagtgtatcaaatcagaagcatatgctgatgcagtcaaattctatactggtgcaatgccaatttttaaagcatatggagactcctcgtttcaggattgtaagcgagcatctgaagaagctgtggccataattataaagaatttgcagggaaagcttttctcagattctgagtccatccaagcaagagctgaggctgctgtgcttcttaagcaattggatttcccagtcaatagcttaaaggtgaaacttcttgagaaattggaacaatctgttgccgacctgcagcttaacattgaagaggttggtaatgcttcagtggattcaaatcatccttctactgatccagctcctgctactgctcatgatgcttctgttcgtgagtttgcggaggctattcgtgcttatcgggtgatatttcctgattcggataaccaattaaccagacttgcacaagacttggtatccaggcactttggaaccactgagcagtacataaagaaacaagtttggtcggcagatctactaggtgtccttcgaattatatggaaagatgtacttctattggaagatgtgctacatgaggctgctctaaccaattattcttttgaggctgcccaaatttctgtcaaattctacattgccaacaaatttactcatctccaaagcgagatatcagatgccctcaaaaaggtccaaattaaacaaaagaatagcggagaagattattccttgcaagttgccctcgagggcggaaaaaaggcagttctccaaggcagcatgaatgtcttactggacttccgccaacttttggacgatgatttgggcctactagttaaactgagagactttattattgattgggtccaagaagggtttcaggaattcttcagggcacttgatggtcacttcctcttgctatcaggcaggcatagttcagccagtcaagatcaaggtttgacagagggaaaactagatgacaaagttctggcagggcttgtccttgtgctcgcccaaatttcgcttttcatagaacaaaatgctatcccaagaatcactgaggaaataggtgcgtccttttctgatggtggtgtcagacgctatgaaaatgggcctgcctttgttcctggagaaatctgtaggattttccggtcagctagtgaaaagtttctgcacctttacataaaaatgacaacccaaagaatatcagttctccaaaagagaaagtttacagcaacaacttgggtcaagcacaaggaaccgcgagaagttagcatgtttgttgatttatttcttcacgaattggaaggaatagggagagaggttaagcagattttacctgaaggcctccgaagacatcgtagggctgacagcactgggagcactgcctcatcacggagtaatccattacgtgaggagaaattgagtcggtcaaatacccaaagggcaaggagccagctattggaaacccatctagcaaaattgttcaagcaaaaaattgaaatttttacgaaagtggaatttacacaggggtcagttttaacaactgtggtaaaacttgggctaaaaagcttgcaagaatttgtcagactccaaacttttagtcgaagtggattccagcaagttcagttggacattcagtttatgaggactcctttaaaggaaatggcagaagatgaagctgccattgactttttgctagatgaggtggttgttgctactgcggagcgttgtcttgacccaactccattagagccccccatcttggacagacttatgcaagcaaagttggttgcggcggtgtggcgcttccagatctggttcggtggctctctgacgtcacctcgacgtcgtggtgatgttgtcggatgggtgacatatggtttaaacctctgggatttctttgcttttgagacccttccctgtttagggttagggtctgcctatgttgtagctcgtccttcgttttctaggtggtggcgcaagatggcggtcttccttgacgcgggacggggttgggcagcttgccggtgcggtagagtcgatacaagggcacggcggcatagttctgcagggtgtttgcttggattagaattgtgggagttcatcctggaagaacttttagattggtacagaatgtcgactcccaatctgctgggagattgctgtggtaagcttgttgttgctcgccataaacgaatcaacgacgagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000938 GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006810 GO:0006914 GO:0007034 GO:0007041 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010051 GO:0010305 GO:0012505 GO:0016192 GO:0016197 GO:0016482 GO:0031410 GO:0031982 GO:0032456 GO:0032501 GO:0032502 GO:0032991 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055037 GO:0061919 GO:0097708 GO:0099023 GO:1990745

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps51

Protein Analysis

907

Amino Acids

102.79

Weight (kDa)

6.84

Isoelectric Point (pI)

48.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02030 AT4G02030
fragaria_vesca	FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210
malus_domestica	MD03G1295300.v1.1
prunus_persica	Prupe.5G007800_v2.0.a1 Prupe.5G007800_v2.0.a1
pyrus_communis	pycom01g04460
rosa_chinensis	RchiOBHm_Chr7g0241471
rosa_laevigata	RLG00000000578
rosa_multiflora	Rmu_sc0040921.1_g000003
rosa_roxburghii	Rroxscaffold_3G00219100
rosa_rugosa	Rorug07G0344000 Rorug07G0344100 Rorug07G0344200
rosa_samantha	Rh7AG498800 Rh7BG469400 Rh7CG515700 Rh7DG483500
rosa_wichuraiana	Rw7G042130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	647
AatII	GACGTC	2 cut(s)	2351, 2362
AbsI	CCTCGAGG	1 cut(s)	1256
Acc36I	ACCTGC	2 cut(s)	508, 801
AccB7I	CCANNNNNTGG	2 cut(s)	1321, 1972
AccI	GTMKAC	1 cut(s)	2651
AccII	CGCG	3 cut(s)	460, 1774, 2516
AclWI	GGATC	4 cut(s)	57, 71, 149, 848
AcoI	YGGCCR	1 cut(s)	636
AcuI	CTGAAG	5 cut(s)	464, 645, 810, 1384, 1872
AcyI	GRCGYC	3 cut(s)	132, 2348, 2359
AfaI	GTAC	7 cut(s)	119, 167, 183, 457, 1004, 1068, 2642
AfiI	CCNNNNNNNGG	8 cut(s)	1201, 1321, 1905, 1972, 2275, 2438, 2439, 2515
AflII	CTTAAG	1 cut(s)	719
AflIII	ACRYGT	1 cut(s)	217
AgsI	TTSAA	7 cut(s)	84, 224, 425, 809, 837, 1999, 2012
AhlI	ACTAGT	1 cut(s)	1342
AjnI	CCWGG	3 cut(s)	977, 1636, 2619
AjuI	GAANNNNNNNTTGG	4 cut(s)	88, 120, 1371, 1403
Alw21I	GWGCWC	2 cut(s)	1521, 1895
Alw26I	GTCTC	4 cut(s)	208, 585, 1350, 2417
AlwI	GGATC	4 cut(s)	57, 71, 149, 848
AlwNI	CAGNNNCTG	2 cut(s)	680, 863
Ama87I	CYCGRG	1 cut(s)	1256
AoxI	GGCC	4 cut(s)	636, 1336, 1622, 1855
ApeKI	GCWGC	9 cut(s)	230, 364, 707, 796, 1097, 1124, 1287, 2192, 2531
ArsI	GACNNNNNNTTYG	2 cut(s)	2098, 2130
Asp700I	GAANNNNTTC	3 cut(s)	204, 1386, 1677
AspLEI	GCGC	3 cut(s)	302, 2319, 2493
AspS9I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
AsuHPI	GGTGA	6 cut(s)	115, 766, 934, 2343, 2378, 2395
AsuII	TTCGAA	1 cut(s)	1048
AvaI	CYCGRG	1 cut(s)	1256
AvaII	GGWCC	2 cut(s)	1204, 1375
BaeGI	GKGCMC	2 cut(s)	1408, 2566
BalI	TGGCCA	1 cut(s)	638
BanII	GRGCYC	1 cut(s)	2268
BarI	GAAGNNNNNNTAC	4 cut(s)	192, 224, 1071, 1103
BbsI	GAAGAC	2 cut(s)	1870, 2497
Bbv12I	GWGCWC	2 cut(s)	1521, 1895
BbvCI	CCTCAGC	1 cut(s)	702
BbvI	GCAGC	9 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179, 2543
BccI	CCATC	9 cut(s)	143, 395, 695, 1406, 1589, 1989, 2279, 2373, 2491
BceAI	ACGGC	1 cut(s)	2582
BcgI	CGANNNNNNTGC	2 cut(s)	482, 516
BciT130I	CCWGG	3 cut(s)	979, 1638, 2621
BciVI	GTATCC	1 cut(s)	985
BcoDI	GTCTC	4 cut(s)	208, 585, 1350, 2417
BcuI	ACTAGT	1 cut(s)	1342
BfaI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2481
BfmI	CTRYAG	4 cut(s)	209, 794, 1648, 2580
BfoI	RGCGCY	1 cut(s)	2320
BfrI	CTTAAG	1 cut(s)	719
BfuAI	ACCTGC	2 cut(s)	508, 801
BfuI	GTATCC	1 cut(s)	985
BglII	AGATCT	2 cut(s)	1030, 2325
Bme1390I	CCNGG	3 cut(s)	979, 1638, 2621
Bme18I	GGWCC	2 cut(s)	1204, 1375
BmeT110I	CYCGRG	1 cut(s)	1256
BmgT120I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
BmiI	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
BmrFI	CCNGG	3 cut(s)	979, 1638, 2621
BmrI	ACTGGG	2 cut(s)	731, 1896
BmsI	GCATC	5 cut(s)	460, 532, 629, 868, 1180
BmuI	ACTGGG	2 cut(s)	731, 1896
BpiI	GAAGAC	2 cut(s)	1870, 2497
BpmI	CTGGAG	2 cut(s)	57, 1659
Bpu10I	CCTNAGC	1 cut(s)	702
Bpu14I	TTCGAA	1 cut(s)	1048
BpuEI	CTTGAG	1 cut(s)	785
BsaAI	YACGTR	1 cut(s)	1922
BsaBI	GATNNNNATC	2 cut(s)	159, 837
BsaHI	GRCGYC	3 cut(s)	132, 2348, 2359
BsaI	GGTCTC	1 cut(s)	2417
BsaJI	CCNNGG	1 cut(s)	1282
BsaWI	WCCGGW	1 cut(s)	1659
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	8 cut(s)	1201, 1321, 1905, 1972, 2275, 2438, 2439, 2515
Bse118I	RCCGGY	1 cut(s)	2538
Bse1I	ACTGG	5 cut(s)	565, 737, 1308, 1452, 1891
Bse3DI	GCAATG	2 cut(s)	573, 1149
Bse8I	GATNNNNATC	2 cut(s)	159, 837
BseBI	CCWGG	3 cut(s)	979, 1638, 2621
BseDI	CCNNGG	1 cut(s)	1282
BseGI	GGATG	4 cut(s)	687, 841, 2384, 2616
BseJI	GATNNNNATC	2 cut(s)	159, 837
BseLI	CCNNNNNNNGG	8 cut(s)	1201, 1321, 1905, 1972, 2275, 2438, 2439, 2515
BseMI	GCAATG	2 cut(s)	573, 1149
BseMII	CTCAG	7 cut(s)	225, 672, 687, 693, 987, 1343, 1560
BseNI	ACTGG	5 cut(s)	565, 737, 1308, 1452, 1891
BseRI	GAGGAG	2 cut(s)	586, 1940
BseSI	GKGCMC	2 cut(s)	1408, 2566
BseXI	GCAGC	9 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179, 2543
BseYI	CCCAGC	1 cut(s)	2665
BsgI	GTGCAG	1 cut(s)	1667
Bsh1236I	CGCG	3 cut(s)	460, 1774, 2516
BshFI	GGCC	4 cut(s)	638, 1338, 1624, 1857
BsiHKAI	GWGCWC	2 cut(s)	1521, 1895
BsiHKCI	CYCGRG	1 cut(s)	1256
BsiSI	CCGG	2 cut(s)	1660, 2539
BsiWI	CGTACG	1 cut(s)	455
BslFI	GGGAC	2 cut(s)	76, 2532
BslI	CCNNNNNNNGG	8 cut(s)	1201, 1321, 1905, 1972, 2275, 2438, 2439, 2515
BsmAI	GTCTC	4 cut(s)	208, 585, 1350, 2417
BsmFI	GGGAC	2 cut(s)	76, 2532
BsnI	GGCC	4 cut(s)	638, 1338, 1624, 1857
Bso31I	GGTCTC	1 cut(s)	2417
BsoBI	CYCGRG	1 cut(s)	1256
Bsp119I	TTCGAA	1 cut(s)	1048
Bsp1286I	GDGCHC	5 cut(s)	1408, 1521, 1895, 2268, 2566
Bsp143I	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
BspANI	GGCC	4 cut(s)	638, 1338, 1624, 1857
BspCNI	CTCAG	7 cut(s)	226, 673, 686, 694, 988, 1344, 1561
BspFNI	CGCG	3 cut(s)	460, 1774, 2516
BspHI	TCATGA	1 cut(s)	874
BspLI	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
BspMAI	CTGCAG	2 cut(s)	798, 2584
BspMI	ACCTGC	2 cut(s)	508, 801
BspPI	GGATC	4 cut(s)	57, 71, 149, 848
BspT104I	TTCGAA	1 cut(s)	1048
BspTI	CTTAAG	1 cut(s)	719
BspTNI	GGTCTC	1 cut(s)	2417
BsrDI	GCAATG	2 cut(s)	573, 1149
BsrFI	RCCGGY	1 cut(s)	2538
BsrI	ACTGG	5 cut(s)	565, 737, 1308, 1452, 1891
BssAI	RCCGGY	1 cut(s)	2538
BssECI	CCNNGG	1 cut(s)	1282
BssMI	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
BssNI	GRCGYC	3 cut(s)	132, 2348, 2359
BssT1I	CCWWGG	1 cut(s)	1282
Bst2UI	CCWGG	3 cut(s)	979, 1638, 2621
Bst4CI	ACNGT	1 cut(s)	2059
Bst6I	CTCTTC	2 cut(s)	32, 804
BstACI	GRCGYC	3 cut(s)	132, 2348, 2359
BstAFI	CTTAAG	1 cut(s)	719
BstBAI	YACGTR	1 cut(s)	1922
BstBI	TTCGAA	1 cut(s)	1048
BstC8I	GCNNGC	9 cut(s)	618, 1439, 1521, 1626, 1967, 2084, 2292, 2536, 2698
BstDEI	CTNAG	7 cut(s)	234, 673, 681, 702, 996, 1352, 1569
BstENI	CCTNNNNNAGG	1 cut(s)	1199
BstF5I	GGATG	4 cut(s)	687, 841, 2384, 2616
BstFNI	CGCG	3 cut(s)	460, 1774, 2516
BstH2I	RGCGCY	1 cut(s)	2320
BstHHI	GCGC	3 cut(s)	302, 2319, 2493
BstKTI	GATC	9 cut(s)	52, 79, 157, 163, 496, 856, 1033, 1462, 2328
BstMAI	GTCTC	4 cut(s)	208, 585, 1350, 2417
BstMBI	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
BstMWI	GCNNNNNNNGC	8 cut(s)	457, 509, 664, 707, 721, 878, 911, 1890
BstNI	CCWGG	3 cut(s)	979, 1638, 2621
BstNSI	RCATGY	2 cut(s)	221, 1789
BstSCI	CCNGG	3 cut(s)	977, 1636, 2619
BstSFI	CTRYAG	4 cut(s)	209, 794, 1648, 2580
BstSLI	GKGCMC	2 cut(s)	1408, 2566
BstUI	CGCG	3 cut(s)	460, 1774, 2516
BstV1I	GCAGC	9 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179, 2543
BstV2I	GAAGAC	2 cut(s)	1870, 2497
BstX2I	RGATCY	4 cut(s)	49, 76, 1030, 2325
BstXI	CCANNNNNNTGG	1 cut(s)	2665
BstYI	RGATCY	4 cut(s)	49, 76, 1030, 2325
BsuI	GTATCC	1 cut(s)	985
BsuRI	GGCC	4 cut(s)	638, 1338, 1624, 1857
BtsCI	GGATG	4 cut(s)	687, 841, 2384, 2616
BtsI	GCAGTG	1 cut(s)	1893
BtsIMutI	CAGTG	6 cut(s)	252, 834, 993, 1566, 1884, 1893
BveI	ACCTGC	2 cut(s)	508, 801
Cac8I	GCNNGC	9 cut(s)	618, 1439, 1521, 1626, 1967, 2084, 2292, 2536, 2698
CaiI	CAGNNNCTG	2 cut(s)	680, 863
CciI	TCATGA	1 cut(s)	874
CfoI	GCGC	3 cut(s)	302, 2319, 2493
Cfr10I	RCCGGY	1 cut(s)	2538
Cfr13I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
CseI	GACGC	4 cut(s)	140, 1572, 1617, 2522
Csp6I	GTAC	7 cut(s)	118, 166, 182, 456, 1003, 1067, 2641
CviAII	CATG	8 cut(s)	169, 218, 343, 355, 875, 1091, 1291, 1786
CviQI	GTAC	7 cut(s)	118, 166, 182, 456, 1003, 1067, 2641
DdeI	CTNAG	7 cut(s)	234, 673, 681, 702, 996, 1352, 1569
DpnI	GATC	9 cut(s)	51, 78, 156, 162, 495, 855, 1032, 1461, 2327
DpnII	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
DraI	TTTAAA	3 cut(s)	580, 2169, 2397
EaeI	YGGCCR	1 cut(s)	636
Eam1104I	CTCTTC	2 cut(s)	32, 804
EarI	CTCTTC	2 cut(s)	32, 804
EciI	GGCGGA	2 cut(s)	1278, 1301
Eco130I	CCWWGG	1 cut(s)	1282
Eco147I	AGGCCT	1 cut(s)	1857
Eco24I	GRGCYC	1 cut(s)	2268
Eco31I	GGTCTC	1 cut(s)	2417
Eco32I	GATATC	1 cut(s)	1185
Eco47I	GGWCC	2 cut(s)	1204, 1375
Eco57I	CTGAAG	5 cut(s)	464, 645, 810, 1384, 1872
Eco88I	CYCGRG	1 cut(s)	1256
EcoNI	CCTNNNNNAGG	1 cut(s)	1199
EcoRI	GAATTC	1 cut(s)	1394
EcoRII	CCWGG	3 cut(s)	977, 1636, 2619
EcoRV	GATATC	1 cut(s)	1185
EcoT14I	CCWWGG	1 cut(s)	1282
EcoT38I	GRGCYC	1 cut(s)	2268
ErhI	CCWWGG	1 cut(s)	1282
FaeI	CATG	8 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789
FalI	AAGNNNNNCTT	4 cut(s)	179, 211, 1053, 1085
FaqI	GGGAC	2 cut(s)	76, 2532
FatI	CATG	8 cut(s)	168, 217, 342, 354, 874, 1090, 1290, 1785
FauI	CCCGC	1 cut(s)	2509
FauNDI	CATATG	3 cut(s)	535, 586, 2389
FblI	GTMKAC	1 cut(s)	2651
FokI	GGATG	4 cut(s)	674, 828, 2391, 2603
FriOI	GRGCYC	1 cut(s)	2268
FspBI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2481
GlaI	GCGC	3 cut(s)	301, 2318, 2492
GsaI	CCCAGC	1 cut(s)	2669
GsuI	CTGGAG	2 cut(s)	57, 1659
HaeII	RGCGCY	1 cut(s)	2320
HaeIII	GGCC	4 cut(s)	638, 1338, 1624, 1857
HapII	CCGG	2 cut(s)	1660, 2539
HgaI	GACGC	4 cut(s)	140, 1572, 1617, 2522
HhaI	GCGC	3 cut(s)	302, 2319, 2493
Hin1I	GRCGYC	3 cut(s)	132, 2348, 2359
Hin1II	CATG	8 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789
Hin6I	GCGC	3 cut(s)	300, 2317, 2491
HinP1I	GCGC	3 cut(s)	300, 2317, 2491
HincII	GTYRAC	2 cut(s)	409, 2652
HindII	GTYRAC	2 cut(s)	409, 2652
HindIII	AAGCTT	4 cut(s)	476, 665, 2080, 2684
HpaII	CCGG	2 cut(s)	1660, 2539
HphI	GGTGA	6 cut(s)	115, 766, 934, 2343, 2378, 2395
Hpy166II	GTNNAC	3 cut(s)	409, 1740, 2652
Hpy8I	GTNNAC	3 cut(s)	409, 1740, 2652
Hpy99I	CGWCG	4 cut(s)	134, 2361, 2364, 2720
HpyCH4III	ACNGT	1 cut(s)	2059
HpyCH4IV	ACGT	3 cut(s)	1921, 2348, 2359
HpyF10VI	GCNNNNNNNGC	8 cut(s)	457, 509, 664, 707, 721, 878, 911, 1890
HpyF3I	CTNAG	7 cut(s)	234, 673, 681, 702, 996, 1352, 1569
HpySE526I	ACGT	3 cut(s)	1921, 2348, 2359
Hsp92I	GRCGYC	3 cut(s)	132, 2348, 2359
Hsp92II	CATG	8 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789
HspAI	GCGC	3 cut(s)	300, 2317, 2491
Kzo9I	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
LmnI	GCTCC	4 cut(s)	865, 1890, 1962, 2236
Lsp1109I	GCAGC	9 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179, 2543
LweI	GCATC	5 cut(s)	460, 532, 629, 868, 1180
MaeI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2481
MaeII	ACGT	3 cut(s)	1921, 2348, 2359
MaeIII	GTNAC	3 cut(s)	1415, 2349, 2383
MalI	GATC	9 cut(s)	51, 78, 156, 162, 495, 855, 1032, 1461, 2327
MboI	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
MfeI	CAATTG	1 cut(s)	725
MflI	RGATCY	4 cut(s)	49, 76, 1030, 2325
MhlI	GDGCHC	5 cut(s)	1408, 1521, 1895, 2268, 2566
MlsI	TGGCCA	1 cut(s)	638
MluNI	TGGCCA	1 cut(s)	638
MlyI	GAGTC	7 cut(s)	587, 692, 1945, 2094, 2155, 2559, 2647
MmeI	TCCRAC	2 cut(s)	2121, 2356
Mox20I	TGGCCA	1 cut(s)	638
MroXI	GAANNNNTTC	3 cut(s)	204, 1386, 1677
MscI	TGGCCA	1 cut(s)	638
MslI	CAYNNNNRTG	1 cut(s)	1697
Msp20I	TGGCCA	1 cut(s)	638
MspA1I	CMGCKG	1 cut(s)	364
MspCI	CTTAAG	1 cut(s)	719
MspI	CCGG	2 cut(s)	1660, 2539
MspR9I	CCNGG	3 cut(s)	979, 1638, 2621
MssI	GTTTAAAC	1 cut(s)	2397
MunI	CAATTG	1 cut(s)	725
MvaI	CCWGG	3 cut(s)	979, 1638, 2621
MvnI	CGCG	3 cut(s)	460, 1774, 2516
MwoI	GCNNNNNNNGC	8 cut(s)	457, 509, 664, 707, 721, 878, 911, 1890
NdeI	CATATG	3 cut(s)	535, 586, 2389
NdeII	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
NlaIII	CATG	8 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789
NlaIV	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
NmuCI	GTSAC	3 cut(s)	1415, 2349, 2383
NspI	RCATGY	2 cut(s)	221, 1789
NspV	TTCGAA	1 cut(s)	1048
PaeR7I	CTCGAG	1 cut(s)	1256
PagI	TCATGA	1 cut(s)	874
PceI	AGGCCT	1 cut(s)	1857
PciI	ACATGT	1 cut(s)	217
PcsI	WCGNNNNNNNCGW	1 cut(s)	2704
PdmI	GAANNNNTTC	3 cut(s)	204, 1386, 1677
PfeI	GAWTC	9 cut(s)	172, 244, 463, 677, 833, 935, 1563, 2124, 2709
Pfl23II	CGTACG	1 cut(s)	455
PflMI	CCANNNNNTGG	2 cut(s)	1321, 1972
PfoI	TCCNGGA	2 cut(s)	1636, 2619
PleI	GAGTC	7 cut(s)	587, 691, 1944, 2094, 2155, 2558, 2647
PmeI	GTTTAAAC	1 cut(s)	2397
PpsI	GAGTC	7 cut(s)	587, 691, 1944, 2094, 2155, 2558, 2647
Ppu21I	YACGTR	1 cut(s)	1922
PscI	ACATGT	1 cut(s)	217
PsiI	TTATAA	1 cut(s)	647
Psp6I	CCWGG	3 cut(s)	977, 1636, 2619
PspFI	CCCAGC	1 cut(s)	2665
PspGI	CCWGG	3 cut(s)	977, 1636, 2619
PspLI	CGTACG	1 cut(s)	455
PspN4I	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
PspPI	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
PspXI	VCTCGAGB	1 cut(s)	1256
PstI	CTGCAG	2 cut(s)	798, 2584
PstNI	CAGNNNCTG	2 cut(s)	680, 863
PsuI	RGATCY	4 cut(s)	49, 76, 1030, 2325
PvuII	CAGCTG	1 cut(s)	364
RsaI	GTAC	7 cut(s)	119, 167, 183, 457, 1004, 1068, 2642
RsaNI	GTAC	7 cut(s)	118, 166, 182, 456, 1003, 1067, 2641
RseI	CAYNNNNRTG	1 cut(s)	1697
SalI	GTCGAC	1 cut(s)	2650
Sau3AI	GATC	9 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459, 2325
Sau96I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
SchI	GAGTC	7 cut(s)	587, 692, 1945, 2094, 2155, 2559, 2647
ScrFI	CCNGG	3 cut(s)	979, 1638, 2621
SduI	GDGCHC	5 cut(s)	1408, 1521, 1895, 2268, 2566
SfaNI	GCATC	5 cut(s)	460, 532, 629, 868, 1180
SfcI	CTRYAG	4 cut(s)	209, 794, 1648, 2580
Sfr274I	CTCGAG	1 cut(s)	1256
SfuI	TTCGAA	1 cut(s)	1048
SinI	GGWCC	2 cut(s)	1204, 1375
SlaI	CTCGAG	1 cut(s)	1256
SmiMI	CAYNNNNRTG	1 cut(s)	1697
SmlI	CTYRAG	3 cut(s)	719, 764, 1256
SmoI	CTYRAG	3 cut(s)	719, 764, 1256
SpeI	ACTAGT	1 cut(s)	1342
SseBI	AGGCCT	1 cut(s)	1857
SspMI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2481
StuI	AGGCCT	1 cut(s)	1857
StyD4I	CCNGG	3 cut(s)	977, 1636, 2619
StyI	CCWWGG	1 cut(s)	1282
TaaI	ACNGT	1 cut(s)	2059
TaiI	ACGT	3 cut(s)	1924, 2351, 2362
TaqI	TCGA	9 cut(s)	59, 129, 153, 1048, 1257, 2116, 2356, 2553, 2651
TaqII	GACCGA	1 cut(s)	1929
TatI	WGTACW	3 cut(s)	165, 1002, 1066
TauI	GCSGC	2 cut(s)	2309, 2572
TfiI	GAWTC	9 cut(s)	172, 244, 463, 677, 833, 935, 1563, 2124, 2709
TscAI	CASTG	6 cut(s)	259, 834, 1000, 1573, 1891, 1900
TseFI	GTSAC	3 cut(s)	1415, 2349, 2383
TseI	GCWGC	9 cut(s)	230, 364, 707, 796, 1097, 1124, 1287, 2192, 2531
Tsp45I	GTSAC	3 cut(s)	1415, 2349, 2383
TspDTI	ATGAA	9 cut(s)	96, 185, 338, 475, 1307, 1528, 1629, 2202, 2605
TspGWI	ACGGA	2 cut(s)	373, 1921
TspRI	CASTG	6 cut(s)	259, 834, 1000, 1573, 1891, 1900
Van91I	CCANNNNNTGG	2 cut(s)	1321, 1972
Vha464I	CTTAAG	1 cut(s)	719
VpaK11BI	GGWCC	2 cut(s)	1204, 1375
XagI	CCTNNNNNAGG	1 cut(s)	1199
XceI	RCATGY	2 cut(s)	221, 1789
XhoI	CTCGAG	1 cut(s)	1256
XmiI	GTMKAC	1 cut(s)	2651
XmnI	GAANNNNTTC	3 cut(s)	204, 1386, 1677
XspI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2481
ZraI	GACGTC	2 cut(s)	2349, 2360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.