Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005698

Physical Location & Seq

Genomic Coordinates Forward (+)

67552273 .. 67560820

Gene Structure 8548 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ21638

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGGAGGTGGAAGGTGTGCCTCTGGACGACAAGGCAAAGAGAATGAGGGATCTGCTATCGAGCTTCTACTCTCCAGATCCTTCAATGTCGTCCCCAAACTCCAATTCATCTTCCAAGTACATCACTCTCGACGCCATCAACACCACCTCCTTCGATCCCGATCAGTACATGAATCTTCTCGTACATAAGTCAAACTTGGAAGGGCTTCTACAGAGACATGTTGAAATGGCTGCTGAGATAAAGAATCTTGACACTGACTTACAAATGTTAGTTTATGAGAACTACAACAAGTTTATCAGCGCAACAGATACAATTAAACAGATGAAAAGTAATATCGTGGGCATGGAGGCAAACATGGAACAGCTGCTTGATAAGATAATGTCCGTGCAATCTAGGAGTGATGGGGTCAACACTTCTCTTTTTGAAAAGAGAGAACACATAGAGAAATTGCATCGTACGCGGAATCTTCTTCGTAAGCTTCAGTTCATATACGATCTACCTGCTAGACTTGCAAAGTGTATCAAATCAGAAGCATATGCTGATGCAGTCAAATTCTATACTGGTGCAATGCCAATTTTTAAAGCATATGGAGACTCCTCGTTTCAGGATTGTAAGCGAGCATCTGAAGAAGCTGTGGCCATAATTATAAAGAATTTGCAGGGAAAGCTTTTCTCAGATTCTGAGTCCATCCAAGCAAGAGCTGAGGCTGCTGTGCTTCTTAAGCAATTGGATTTCCCAGTCAATAGCTTAAAGGTGAAACTCCTTGAGAAATTGGAACAATCTGTTGCCGACCTGCAGCTTAACATTGAAGAGGTTGGTAATGCTTCAGTGGATTCAAATCATCCTTCTACTGATCCAGCTCCTGCTACTGCTCATGATGCTTCTGTTCGTGAGTTTGCGGAGGCTATTCGTGCTTATCGGGTGATATTTCCTGATTCGGATAACCAATTAACCAGACTTGCACAAGACTTGGTATCCAGGCACTTTGGAACCACTGAGCAGTACATAAAGAAACAAGTTTGGTCGGCAGATCTACTAGGTGTCCTTCGAATTATATGGAAAGATGTACTTCTATTGGAAGATGTGCTACATGAGGCTGCTCTAACCAATTATTCTTTTGAGGCTGCCCAAATTTCTGTCAAATTCTACATTGCCAACAAATTTACTCATCTCCAAAGCGAGATATCAGATGCCCTCAAAAAGGTCCAAATTAAACAAAAGAATAGCGGAGAAGATTATTCCTTGCAAGTTGCCCTCGAGGGCGGAAAAAAGGCAGTTCTCCAAGGCAGCATGAATGTCTTACTGGACTTCCGCCAACTTTTGGACGATGATTTGGGCCTACTAGTTAAACTGAGAGACTTTATTATTGATTGGGTCCAAGAAGGGTTTCAGGAATTCTTCAGGGCACTTGATGGTCACTTCCTCTTGCTATCAGGCAGGCATAGTTCAGCCAGTCAAGATCAGGGTTTGACAGAGGGAAAACTAGATGACAAAGTTCTGGCAGGGCTTGTCCTTGTGCTCGCCCAAATTTCGCTTTTCATAGAACAAAATGCTATCCCAAGAATCACCGAGGAAATAGGTGCGTCCTTTTCTGATGGTGGTGTCAGACGCTATGAAAATGGGCCTGCCTTTGTTCCTGGAGAAATCTGTAGGATTTTCCGGTCAGCTAGTGAAAAGTTTCTGCACCTTTACATAAAAATGACAACCCAAAGGATATCAGTTCTCCAAAAGAGAAAGTTTACAGCAACAACTTGGGTCAAGCACAAGGAACCGCGAGAAGTTAGCATGTTTGTTGATTTATTTCTTCACGAATTGGAAGGAATAGGGAGAGAGGTTAAGCAGATTTTACCTGAAGGCCTCCGAAGACATCGTAGGGCTGACAGCACTGGGAGTACTGCCTCATCACGGAGTAATCCATTACGTGAGGAGAAATTGAGTCGGTCAAATACCCAAAGGGCAAGGAGCCAGCTATTGGAAACCCATCTAGCAAAATTGTTCAAGCAAAAAATTGAAATTTTTACGAAAGTGGAATTTACACAGGGGTCAGTTTTAACAACTGTGGTAAAACTTGGGCTAAAAAGCTTGCAAGAATTTGTCAGACTCCAAACTTTTAGTCGAAGTGGATTCCAGCAAGTTCAGTTGGACATTCAGTTTTTGAGGACTCCTTTAAAGGAAATGGCAGAAGATGAAGCTGCCATTGACTTTTTGCTAGATGAGGTGGTTGTTGCTACTGCGGAGCGTTGTCTTGACCCAACTCCATTAGAGCCCCCCATCTTGGACAGACTTATGCTAGCAAAGTTGGTAAAAACCAGGGAACAGAATCTACTTTCTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000938 GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006810 GO:0006914 GO:0007034 GO:0007041 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010051 GO:0010305 GO:0012505 GO:0016192 GO:0016197 GO:0016482 GO:0031410 GO:0031982 GO:0032456 GO:0032501 GO:0032502 GO:0032991 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055037 GO:0061919 GO:0097708 GO:0099023 GO:1990745

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps51

Protein Analysis

778

Amino Acids

88.0

Weight (kDa)

6.22

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec5	PF15469	45 - 260	3.4e-14	Exocyst complex component Sec5
VPS51_Exo84_N	PF08700	47 - 131	4.3e-23	Vps51/EXO84/COG1 N-terminal
Dor1	PF04124	63 - 389	2.7e-12	Dor1-like family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02030 AT4G02030
fragaria_vesca	FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210
malus_domestica	MD03G1295300.v1.1
prunus_persica	Prupe.5G007800_v2.0.a1 Prupe.5G007800_v2.0.a1
pyrus_communis	pycom01g04460
rosa_chinensis	RchiOBHm_Chr7g0241471
rosa_laevigata	RLG00000000578
rosa_multiflora	Rmu_sc0040921.1_g000003
rosa_roxburghii	Rroxscaffold_3G00219100
rosa_rugosa	Rorug07G0344000 Rorug07G0344100 Rorug07G0344200
rosa_samantha	Rh7AG498800 Rh7BG469400 Rh7CG515700 Rh7DG483500
rosa_wichuraiana	Rw7G042130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	647
AbsI	CCTCGAGG	1 cut(s)	1256
Acc36I	ACCTGC	2 cut(s)	508, 801
AccB7I	CCANNNNNTGG	2 cut(s)	1321, 1972
AccII	CGCG	2 cut(s)	460, 1774
AciI	CCGC	7 cut(s)	460, 899, 1227, 1263, 1312, 1772, 2234
AclWI	GGATC	4 cut(s)	57, 71, 149, 848
AcoI	YGGCCR	1 cut(s)	636
AcuI	CTGAAG	5 cut(s)	464, 645, 810, 1384, 1872
AcyI	GRCGYC	1 cut(s)	132
AfaI	GTAC	7 cut(s)	119, 167, 183, 457, 1004, 1068, 1894
AfiI	CCNNNNNNNGG	5 cut(s)	1201, 1321, 1905, 1972, 2275
AflII	CTTAAG	1 cut(s)	719
AflIII	ACRYGT	1 cut(s)	217
AgsI	TTSAA	7 cut(s)	84, 224, 425, 809, 837, 1999, 2012
AhlI	ACTAGT	1 cut(s)	1342
AjnI	CCWGG	3 cut(s)	977, 1636, 2309
AjuI	GAANNNNNNNTTGG	4 cut(s)	88, 120, 1371, 1403
Alw21I	GWGCWC	1 cut(s)	1521
Alw26I	GTCTC	3 cut(s)	208, 585, 1350
AlwI	GGATC	4 cut(s)	57, 71, 149, 848
AlwNI	CAGNNNCTG	2 cut(s)	680, 863
Ama87I	CYCGRG	1 cut(s)	1256
AoxI	GGCC	4 cut(s)	636, 1336, 1622, 1855
ApeKI	GCWGC	8 cut(s)	230, 364, 707, 796, 1097, 1124, 1287, 2192
ArsI	GACNNNNNNTTYG	2 cut(s)	2098, 2130
Asp700I	GAANNNNTTC	3 cut(s)	204, 1386, 1677
AspLEI	GCGC	1 cut(s)	302
AspS9I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
AsuHPI	GGTGA	3 cut(s)	766, 934, 1558
AsuII	TTCGAA	1 cut(s)	1048
AsuNHI	GCTAGC	1 cut(s)	2290
AvaI	CYCGRG	1 cut(s)	1256
AvaII	GGWCC	2 cut(s)	1204, 1375
BaeGI	GKGCMC	1 cut(s)	1408
BalI	TGGCCA	1 cut(s)	638
BanII	GRGCYC	1 cut(s)	2268
BarI	GAAGNNNNNNTAC	4 cut(s)	192, 224, 1071, 1103
BbsI	GAAGAC	1 cut(s)	1870
Bbv12I	GWGCWC	1 cut(s)	1521
BbvCI	CCTCAGC	1 cut(s)	702
BbvI	GCAGC	8 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179
BccI	CCATC	7 cut(s)	143, 395, 695, 1406, 1589, 1989, 2279
BcgI	CGANNNNNNTGC	2 cut(s)	482, 516
BciT130I	CCWGG	3 cut(s)	979, 1638, 2311
BciVI	GTATCC	1 cut(s)	985
BcoDI	GTCTC	3 cut(s)	208, 585, 1350
BcuI	ACTAGT	1 cut(s)	1342
BfaI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2291
BfmI	CTRYAG	3 cut(s)	209, 794, 1648
BfrI	CTTAAG	1 cut(s)	719
BfuAI	ACCTGC	2 cut(s)	508, 801
BfuI	GTATCC	1 cut(s)	985
BglII	AGATCT	1 cut(s)	1030
BisI	GCNGC	8 cut(s)	231, 365, 708, 797, 1098, 1125, 1288, 2193
BlsI	GCNGC	8 cut(s)	232, 366, 709, 798, 1099, 1126, 1289, 2194
BmcAI	AGTACT	1 cut(s)	1894
Bme1390I	CCNGG	3 cut(s)	979, 1638, 2311
Bme18I	GGWCC	2 cut(s)	1204, 1375
BmeT110I	CYCGRG	1 cut(s)	1256
BmgT120I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
BmiI	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
BmrFI	CCNGG	3 cut(s)	979, 1638, 2311
BmrI	ACTGGG	2 cut(s)	731, 1896
BmsI	GCATC	5 cut(s)	460, 532, 629, 868, 1180
BmtI	GCTAGC	1 cut(s)	2294
BmuI	ACTGGG	2 cut(s)	731, 1896
BpiI	GAAGAC	1 cut(s)	1870
BpmI	CTGGAG	2 cut(s)	57, 1659
Bpu10I	CCTNAGC	1 cut(s)	702
Bpu14I	TTCGAA	1 cut(s)	1048
BpuEI	CTTGAG	1 cut(s)	785
BsaAI	YACGTR	1 cut(s)	1922
BsaBI	GATNNNNATC	2 cut(s)	159, 837
BsaHI	GRCGYC	1 cut(s)	132
BsaJI	CCNNGG	3 cut(s)	1282, 1569, 2310
BsaWI	WCCGGW	1 cut(s)	1659
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	5 cut(s)	1201, 1321, 1905, 1972, 2275
Bse1I	ACTGG	5 cut(s)	565, 737, 1308, 1452, 1891
Bse3DI	GCAATG	2 cut(s)	573, 1149
Bse8I	GATNNNNATC	2 cut(s)	159, 837
BseBI	CCWGG	3 cut(s)	979, 1638, 2311
BseDI	CCNNGG	3 cut(s)	1282, 1569, 2310
BseGI	GGATG	2 cut(s)	687, 841
BseJI	GATNNNNATC	2 cut(s)	159, 837
BseLI	CCNNNNNNNGG	5 cut(s)	1201, 1321, 1905, 1972, 2275
BseMI	GCAATG	2 cut(s)	573, 1149
BseMII	CTCAG	6 cut(s)	225, 672, 687, 693, 987, 1343
BseNI	ACTGG	5 cut(s)	565, 737, 1308, 1452, 1891
BseRI	GAGGAG	2 cut(s)	586, 1940
BseSI	GKGCMC	1 cut(s)	1408
BseXI	GCAGC	8 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179
BsgI	GTGCAG	1 cut(s)	1667
Bsh1236I	CGCG	2 cut(s)	460, 1774
BshFI	GGCC	4 cut(s)	638, 1338, 1624, 1857
BsiHKAI	GWGCWC	1 cut(s)	1521
BsiHKCI	CYCGRG	1 cut(s)	1256
BsiSI	CCGG	1 cut(s)	1660
BsiWI	CGTACG	1 cut(s)	455
BslFI	GGGAC	1 cut(s)	76
BslI	CCNNNNNNNGG	5 cut(s)	1201, 1321, 1905, 1972, 2275
BsmAI	GTCTC	3 cut(s)	208, 585, 1350
BsmFI	GGGAC	1 cut(s)	76
BsnI	GGCC	4 cut(s)	638, 1338, 1624, 1857
BsoBI	CYCGRG	1 cut(s)	1256
Bsp119I	TTCGAA	1 cut(s)	1048
Bsp1286I	GDGCHC	3 cut(s)	1408, 1521, 2268
Bsp143I	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
BspACI	CCGC	7 cut(s)	460, 899, 1227, 1263, 1312, 1772, 2234
BspANI	GGCC	4 cut(s)	638, 1338, 1624, 1857
BspCNI	CTCAG	6 cut(s)	226, 673, 686, 694, 988, 1344
BspFNI	CGCG	2 cut(s)	460, 1774
BspHI	TCATGA	1 cut(s)	874
BspLI	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
BspMAI	CTGCAG	1 cut(s)	798
BspMI	ACCTGC	2 cut(s)	508, 801
BspOI	GCTAGC	1 cut(s)	2294
BspPI	GGATC	4 cut(s)	57, 71, 149, 848
BspT104I	TTCGAA	1 cut(s)	1048
BspTI	CTTAAG	1 cut(s)	719
BsrDI	GCAATG	2 cut(s)	573, 1149
BsrI	ACTGG	5 cut(s)	565, 737, 1308, 1452, 1891
BssECI	CCNNGG	3 cut(s)	1282, 1569, 2310
BssMI	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
BssNI	GRCGYC	1 cut(s)	132
BssT1I	CCWWGG	1 cut(s)	1282
Bst2UI	CCWGG	3 cut(s)	979, 1638, 2311
Bst4CI	ACNGT	1 cut(s)	2059
Bst6I	CTCTTC	1 cut(s)	804
BstACI	GRCGYC	1 cut(s)	132
BstAFI	CTTAAG	1 cut(s)	719
BstBAI	YACGTR	1 cut(s)	1922
BstBI	TTCGAA	1 cut(s)	1048
BstC8I	GCNNGC	7 cut(s)	618, 1439, 1521, 1626, 1967, 2084, 2292
BstDEI	CTNAG	6 cut(s)	234, 673, 681, 702, 996, 1352
BstENI	CCTNNNNNAGG	1 cut(s)	1199
BstF5I	GGATG	2 cut(s)	687, 841
BstFNI	CGCG	2 cut(s)	460, 1774
BstHHI	GCGC	1 cut(s)	302
BstKTI	GATC	8 cut(s)	52, 79, 157, 163, 496, 856, 1033, 1462
BstMAI	GTCTC	3 cut(s)	208, 585, 1350
BstMBI	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
BstMWI	GCNNNNNNNGC	7 cut(s)	457, 509, 664, 707, 721, 878, 911
BstNI	CCWGG	3 cut(s)	979, 1638, 2311
BstNSI	RCATGY	2 cut(s)	221, 1789
BstSCI	CCNGG	3 cut(s)	977, 1636, 2309
BstSFI	CTRYAG	3 cut(s)	209, 794, 1648
BstSLI	GKGCMC	1 cut(s)	1408
BstUI	CGCG	2 cut(s)	460, 1774
BstV1I	GCAGC	8 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179
BstV2I	GAAGAC	1 cut(s)	1870
BstX2I	RGATCY	3 cut(s)	49, 76, 1030
BstYI	RGATCY	3 cut(s)	49, 76, 1030
BsuI	GTATCC	1 cut(s)	985
BsuRI	GGCC	4 cut(s)	638, 1338, 1624, 1857
BtsCI	GGATG	2 cut(s)	687, 841
BtsIMutI	CAGTG	4 cut(s)	252, 834, 993, 1884
BveI	ACCTGC	2 cut(s)	508, 801
Cac8I	GCNNGC	7 cut(s)	618, 1439, 1521, 1626, 1967, 2084, 2292
CaiI	CAGNNNCTG	2 cut(s)	680, 863
CciI	TCATGA	1 cut(s)	874
CfoI	GCGC	1 cut(s)	302
Cfr13I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
CseI	GACGC	3 cut(s)	140, 1572, 1617
Csp6I	GTAC	7 cut(s)	118, 166, 182, 456, 1003, 1067, 1893
CviAII	CATG	9 cut(s)	169, 218, 343, 355, 875, 1091, 1291, 1786, 2334
CviQI	GTAC	7 cut(s)	118, 166, 182, 456, 1003, 1067, 1893
DdeI	CTNAG	6 cut(s)	234, 673, 681, 702, 996, 1352
DpnI	GATC	8 cut(s)	51, 78, 156, 162, 495, 855, 1032, 1461
DpnII	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
DraI	TTTAAA	2 cut(s)	580, 2169
EaeI	YGGCCR	1 cut(s)	636
Eam1104I	CTCTTC	1 cut(s)	804
EarI	CTCTTC	1 cut(s)	804
EciI	GGCGGA	2 cut(s)	1278, 1301
Eco130I	CCWWGG	1 cut(s)	1282
Eco147I	AGGCCT	1 cut(s)	1857
Eco24I	GRGCYC	1 cut(s)	2268
Eco32I	GATATC	2 cut(s)	1185, 1716
Eco47I	GGWCC	2 cut(s)	1204, 1375
Eco57I	CTGAAG	5 cut(s)	464, 645, 810, 1384, 1872
Eco88I	CYCGRG	1 cut(s)	1256
EcoNI	CCTNNNNNAGG	1 cut(s)	1199
EcoRI	GAATTC	1 cut(s)	1394
EcoRII	CCWGG	3 cut(s)	977, 1636, 2309
EcoRV	GATATC	2 cut(s)	1185, 1716
EcoT14I	CCWWGG	1 cut(s)	1282
EcoT38I	GRGCYC	1 cut(s)	2268
ErhI	CCWWGG	1 cut(s)	1282
FaeI	CATG	9 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789, 2337
FalI	AAGNNNNNCTT	4 cut(s)	179, 211, 1053, 1085
FaqI	GGGAC	1 cut(s)	76
FatI	CATG	9 cut(s)	168, 217, 342, 354, 874, 1090, 1290, 1785, 2333
FauNDI	CATATG	2 cut(s)	535, 586
Fnu4HI	GCNGC	8 cut(s)	231, 365, 708, 797, 1098, 1125, 1288, 2193
FokI	GGATG	2 cut(s)	674, 828
FriOI	GRGCYC	1 cut(s)	2268
Fsp4HI	GCNGC	8 cut(s)	231, 365, 708, 797, 1098, 1125, 1288, 2193
FspBI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2291
GlaI	GCGC	1 cut(s)	301
GluI	GCNGC	8 cut(s)	231, 365, 708, 797, 1098, 1125, 1288, 2193
GsuI	CTGGAG	2 cut(s)	57, 1659
HaeIII	GGCC	4 cut(s)	638, 1338, 1624, 1857
HapII	CCGG	1 cut(s)	1660
HgaI	GACGC	3 cut(s)	140, 1572, 1617
HhaI	GCGC	1 cut(s)	302
Hin1I	GRCGYC	1 cut(s)	132
Hin1II	CATG	9 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789, 2337
Hin6I	GCGC	1 cut(s)	300
HinP1I	GCGC	1 cut(s)	300
HincII	GTYRAC	1 cut(s)	409
HindII	GTYRAC	1 cut(s)	409
HindIII	AAGCTT	3 cut(s)	476, 665, 2080
HpaII	CCGG	1 cut(s)	1660
HphI	GGTGA	3 cut(s)	766, 934, 1558
Hpy166II	GTNNAC	2 cut(s)	409, 1740
Hpy8I	GTNNAC	2 cut(s)	409, 1740
Hpy99I	CGWCG	1 cut(s)	134
HpyAV	CCTTC	9 cut(s)	5, 90, 160, 194, 855, 1055, 1376, 1811, 1847
HpyCH4III	ACNGT	1 cut(s)	2059
HpyCH4IV	ACGT	1 cut(s)	1921
HpyF10VI	GCNNNNNNNGC	7 cut(s)	457, 509, 664, 707, 721, 878, 911
HpyF3I	CTNAG	6 cut(s)	234, 673, 681, 702, 996, 1352
HpySE526I	ACGT	1 cut(s)	1921
Hsp92I	GRCGYC	1 cut(s)	132
Hsp92II	CATG	9 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789, 2337
HspAI	GCGC	1 cut(s)	300
Kzo9I	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
LmnI	GCTCC	3 cut(s)	865, 1962, 2236
Lsp1109I	GCAGC	8 cut(s)	217, 351, 694, 808, 1084, 1111, 1299, 2179
LweI	GCATC	5 cut(s)	460, 532, 629, 868, 1180
MaeI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2291
MaeII	ACGT	1 cut(s)	1921
MaeIII	GTNAC	1 cut(s)	1415
MalI	GATC	8 cut(s)	51, 78, 156, 162, 495, 855, 1032, 1461
MboI	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
MfeI	CAATTG	1 cut(s)	725
MflI	RGATCY	3 cut(s)	49, 76, 1030
MhlI	GDGCHC	3 cut(s)	1408, 1521, 2268
MlsI	TGGCCA	1 cut(s)	638
MluNI	TGGCCA	1 cut(s)	638
MlyI	GAGTC	5 cut(s)	587, 692, 1945, 2094, 2155
MmeI	TCCRAC	1 cut(s)	2121
Mox20I	TGGCCA	1 cut(s)	638
MroXI	GAANNNNTTC	3 cut(s)	204, 1386, 1677
MscI	TGGCCA	1 cut(s)	638
MslI	CAYNNNNRTG	1 cut(s)	1697
Msp20I	TGGCCA	1 cut(s)	638
MspA1I	CMGCKG	1 cut(s)	364
MspCI	CTTAAG	1 cut(s)	719
MspI	CCGG	1 cut(s)	1660
MspR9I	CCNGG	3 cut(s)	979, 1638, 2311
MunI	CAATTG	1 cut(s)	725
MvaI	CCWGG	3 cut(s)	979, 1638, 2311
MvnI	CGCG	2 cut(s)	460, 1774
MwoI	GCNNNNNNNGC	7 cut(s)	457, 509, 664, 707, 721, 878, 911
NdeI	CATATG	2 cut(s)	535, 586
NdeII	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
NheI	GCTAGC	1 cut(s)	2290
NlaIII	CATG	9 cut(s)	172, 221, 346, 358, 878, 1094, 1294, 1789, 2337
NlaIV	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
NmuCI	GTSAC	1 cut(s)	1415
NspI	RCATGY	2 cut(s)	221, 1789
NspV	TTCGAA	1 cut(s)	1048
PaeR7I	CTCGAG	1 cut(s)	1256
PagI	TCATGA	1 cut(s)	874
PceI	AGGCCT	1 cut(s)	1857
PciI	ACATGT	1 cut(s)	217
PdmI	GAANNNNTTC	3 cut(s)	204, 1386, 1677
PfeI	GAWTC	9 cut(s)	172, 244, 463, 677, 833, 935, 1563, 2124, 2320
Pfl23II	CGTACG	1 cut(s)	455
PflMI	CCANNNNNTGG	2 cut(s)	1321, 1972
PfoI	TCCNGGA	1 cut(s)	1636
PkrI	GCNGC	8 cut(s)	232, 366, 709, 798, 1099, 1126, 1289, 2194
PleI	GAGTC	5 cut(s)	587, 691, 1944, 2094, 2155
PpsI	GAGTC	5 cut(s)	587, 691, 1944, 2094, 2155
Ppu21I	YACGTR	1 cut(s)	1922
PscI	ACATGT	1 cut(s)	217
PsiI	TTATAA	1 cut(s)	647
Psp6I	CCWGG	3 cut(s)	977, 1636, 2309
PspGI	CCWGG	3 cut(s)	977, 1636, 2309
PspLI	CGTACG	1 cut(s)	455
PspN4I	GGNNCC	4 cut(s)	991, 1376, 1770, 1964
PspPI	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
PspXI	VCTCGAGB	1 cut(s)	1256
PsrI	GAACNNNNNNTAC	1 cut(s)	2307
PstI	CTGCAG	1 cut(s)	798
PstNI	CAGNNNCTG	2 cut(s)	680, 863
PsuI	RGATCY	3 cut(s)	49, 76, 1030
PvuII	CAGCTG	1 cut(s)	364
RsaI	GTAC	7 cut(s)	119, 167, 183, 457, 1004, 1068, 1894
RsaNI	GTAC	7 cut(s)	118, 166, 182, 456, 1003, 1067, 1893
RseI	CAYNNNNRTG	1 cut(s)	1697
SatI	GCNGC	8 cut(s)	231, 365, 708, 797, 1098, 1125, 1288, 2193
Sau3AI	GATC	8 cut(s)	49, 76, 154, 160, 493, 853, 1030, 1459
Sau96I	GGNCC	4 cut(s)	1204, 1336, 1375, 1622
ScaI	AGTACT	1 cut(s)	1894
SchI	GAGTC	5 cut(s)	587, 692, 1945, 2094, 2155
ScrFI	CCNGG	3 cut(s)	979, 1638, 2311
SduI	GDGCHC	3 cut(s)	1408, 1521, 2268
SfaNI	GCATC	5 cut(s)	460, 532, 629, 868, 1180
SfcI	CTRYAG	3 cut(s)	209, 794, 1648
Sfr274I	CTCGAG	1 cut(s)	1256
SfuI	TTCGAA	1 cut(s)	1048
SinI	GGWCC	2 cut(s)	1204, 1375
SlaI	CTCGAG	1 cut(s)	1256
SmiMI	CAYNNNNRTG	1 cut(s)	1697
SmlI	CTYRAG	3 cut(s)	719, 764, 1256
SmoI	CTYRAG	3 cut(s)	719, 764, 1256
SpeI	ACTAGT	1 cut(s)	1342
SseBI	AGGCCT	1 cut(s)	1857
SsiI	CCGC	7 cut(s)	460, 899, 1227, 1263, 1312, 1772, 2234
SspMI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2291
StuI	AGGCCT	1 cut(s)	1857
StyD4I	CCNGG	3 cut(s)	977, 1636, 2309
StyI	CCWWGG	1 cut(s)	1282
TaaI	ACNGT	1 cut(s)	2059
TaiI	ACGT	1 cut(s)	1924
TaqI	TCGA	6 cut(s)	59, 129, 153, 1048, 1257, 2116
TaqII	GACCGA	1 cut(s)	1929
TatI	WGTACW	5 cut(s)	117, 165, 1002, 1066, 1892
TfiI	GAWTC	9 cut(s)	172, 244, 463, 677, 833, 935, 1563, 2124, 2320
TscAI	CASTG	4 cut(s)	259, 834, 1000, 1891
TseFI	GTSAC	1 cut(s)	1415
TseI	GCWGC	8 cut(s)	230, 364, 707, 796, 1097, 1124, 1287, 2192
Tsp45I	GTSAC	1 cut(s)	1415
TspDTI	ATGAA	8 cut(s)	96, 185, 338, 475, 1307, 1528, 1629, 2202
TspGWI	ACGGA	2 cut(s)	373, 1921
TspRI	CASTG	4 cut(s)	259, 834, 1000, 1891
Van91I	CCANNNNNTGG	2 cut(s)	1321, 1972
Vha464I	CTTAAG	1 cut(s)	719
VpaK11BI	GGWCC	2 cut(s)	1204, 1375
XagI	CCTNNNNNAGG	1 cut(s)	1199
XceI	RCATGY	2 cut(s)	221, 1789
XhoI	CTCGAG	1 cut(s)	1256
XmnI	GAANNNNTTC	3 cut(s)	204, 1386, 1677
XspI	CTAG	9 cut(s)	393, 504, 1037, 1343, 1484, 1668, 1985, 2210, 2291
ZrmI	AGTACT	1 cut(s)	1894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.