Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0005698

Physical Location & Seq

Genomic Coordinates Forward (+)

37117519 .. 37124978

Gene Structure 7460 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1295300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGATGTGGACGAGGTGCCGCTGGACGACAAGGCGAAGAGGATGAGGGATCTGCTGTCGAGCTTCTACTCCCCAGACCCTTCGCTGTCGTCTCCCGACTCTAAGTCATCGTCCAAGTACGCCACTCTCGATGCCATCAACTCCACCTCCTTCGATCCCGACCAGTACATGCATCTCCTCGTACACAAGTCAAACTTGGAAGGGCTTCTACAGAGACATGTTCAAATGGCTGCTGAGATAAAGAATCTTGATACTGACTTACAAATGTTAGTATACGAGAACTACAACAAGTTTATTAGCGCGACAGATACTATTAAACAGATGAAAAGTAATATTGTGGGGATGGAGGCAAATATGGAACAGCTCCTTGAGAAGATAATGTCTGTGCAATCTAGAAGTGATGGGGTCAACACTTCTCTTTCTGAGAAGAGGGAACACATAGAAAAGTTGCATCGCACACGAAACCTTCTTCGTAAAGTTCAGTTCATATATGATCTACCTGCTAGGCTCGGGAAGTGCATCAAATCAGAAGCATATGCTGATGCGGTCAAATTTTATACAGGAGCAATACCAATATTTAAGGCATATGGAGACTCCTCATTCCAGGATTGTAAGCGAGCATCTGAAGAAGCTGTGACCATAATTATCAAGAATTTGCAGGGAAAGCTGTTCTCAGATTCTGAATCCATACAAGCAAGAGCTGAGGCTGCTGTGCTTCTTAAGCAATTGGATTTCCCAGTTGACAGCTTAAAGGTGAAGTTGCTTGAGAAGTTGGAACAATCTGTTGCTGGCCTTCAGCTTAAGATAGAAGATATAGGCAATGCTTCACTGGATTCTAATGATCCTTCTACGGACACAGTTCCTGCTACTGCACATGAGACTTCTGTTCGTGAGTTTGCGGAGGCTGTCCGTGCTTATCGCGTAATATTTCCTGATTCGGATACGCAACTAACCAAGCTTGCACAAGACTTGGTTGCCGGGCACTTCAAAACCACTGAGCAATACATAAAGACAGAAATCTGGTCAGCAGATCTACTAGGAGTTCTTCGGATTATATGGAGAGATGTACTTCTGATGGATGATGTGTTAAATGAGGCTGCTCTCTCTGATTATTCTCTGGAGGCTGCTCGGGTTACTGTGAAAGTATATGTTAGCAACAAATTTTCTCATCTCCTAAACAACATTTCAGATGCCCTCACAAAAGCCCACACTAGACAGAAGGACAGAGAAGAGTATTCCTTACAAGTTGCTCTGGAGGGCGGAAAAAAGGCAGTGCTCCAAGGCAGCATGGATGTCTTACTGGACTTCCGCCAACTTCTAGATGATAATTTGGAACTGCTGGTTAAACTGAAAGACTTGATTGTTGATTGGGTCCAAGAAGGGTTTCAAGACTTCTTCAGGGCACTTGAAGGTCACTTTCTCTTGCTTTCAGGAAAGAATAGTTCAGCCAGTCAAGATCAAGGTTTGACAGAGGGAATACAAGATGACAAAGTTCTGGCTGGGCTTGTCCTCGTGCTGGCCCAAGTTTCTGTTTTCATTGAACAAAATGCCATCCCAAGAATCACCGAGGAAATAGCTGCTTCCTTTTCTGGTGGTGGTGTTAGAGGCTATGAATACGGACCTACTTTCATTCCTGGAGAAATCTGTCGGATTTTCCGCTCAGCGGGTGAAAAGTTTCTGCACATTTACATAAATATGAGAACTCAGCGGATATCAGTTCTCTTAAAGAAGAGGTTCACAACACCAAATTGGGTCCAGCACAAGGAACCCCGCGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGTTGGAAGCAATTAGAAGTGAAGTTAAGCAGATTTTGCCCCAAGGCATTCGCAGACATCGCCGGGCTGACAGCAACGGAAGCACTGCCTCATCTCGGAGCAACCCATTACGAGAGGAAAAATTAAGTCGGTCAAACACCCAGAGGGCTAGAAGCCAGCTGTTGGAAACCCATCTAGCAAAACTTTTTAAGCAAAAAGTTGAAATATTTACGAAAGTTGATTTTACGCAGGAGTCGGTGGTAACGACCTTGGTAAAACTTTGCCTTAAAAGCTTGCAAGAATTTGTCAGACTCCAAACTTTTAATAGGAGCGGATTCCAGCAAATTCAGTTGGATATACAGTTCCTAAGGACTCCTTTAAAGGAAATGGCAGAAGATGAAGCTGCCGTTGACTTTCTGCTGGACGAGGTGATTGTTGCAGCAGCTGAGCGTTGTCTTGACCCAATTCCTTTAGAGCCCGCCATCTTGGACAAACTTACACAATTGAAGTTGGCTAAGACCAGGGAACAGAAGCCAATCTCTCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000938 GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006810 GO:0006914 GO:0007034 GO:0007041 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010051 GO:0010305 GO:0012505 GO:0016192 GO:0016197 GO:0016482 GO:0031410 GO:0031982 GO:0032456 GO:0032501 GO:0032502 GO:0032991 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055037 GO:0061919 GO:0097708 GO:0099023 GO:1990745

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Vps51

Protein Analysis

778

Amino Acids

87.84

Weight (kDa)

5.89

Isoelectric Point (pI)

42.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec5	PF15469	41 - 217	9.5e-16	Exocyst complex component Sec5
VPS51_Exo84_N	PF08700	46 - 131	6.1e-24	Vps51/EXO84/COG1 N-terminal
COG5_N	PF10392	48 - 170	2.5e-06	Conserved oligomeric Golgi complex subunit 5, N-terminal
Dor1	PF04124	63 - 336	1.3e-12	Dor1-like family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0005698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02030 AT4G02030
fragaria_vesca	FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210 FvH4_5g39210
malus_domestica	MD03G1295300.v1.1
prunus_persica	Prupe.5G007800_v2.0.a1 Prupe.5G007800_v2.0.a1
pyrus_communis	pycom01g04460
rosa_chinensis	RchiOBHm_Chr7g0241471
rosa_laevigata	RLG00000000578
rosa_multiflora	Rmu_sc0040921.1_g000003
rosa_roxburghii	Rroxscaffold_3G00219100
rosa_rugosa	Rorug07G0344000 Rorug07G0344100 Rorug07G0344200
rosa_samantha	Rh7AG498800 Rh7BG469400 Rh7CG515700 Rh7DG483500
rosa_wichuraiana	Rw7G042130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	508
AccB1I	GGYRCC	1 cut(s)	16
AccB7I	CCANNNNNTGG	1 cut(s)	1969
AccBSI	CCGCTC	2 cut(s)	1659, 2118
AccI	GTMKAC	1 cut(s)	273
AccII	CGCG	3 cut(s)	302, 921, 1773
AclWI	GGATC	3 cut(s)	57, 149, 836
AcsI	RAATTY	5 cut(s)	551, 652, 1160, 2087, 2130
AcuI	CTGAAG	3 cut(s)	645, 779, 1381
AfaI	GTAC	4 cut(s)	119, 167, 183, 1068
AfiI	CCNNNNNNNGG	5 cut(s)	1516, 1663, 1762, 1902, 1969
AflII	CTTAAG	2 cut(s)	719, 800
AflIII	ACRYGT	1 cut(s)	217
AgsI	TTSAA	8 cut(s)	224, 988, 1388, 1409, 1541, 1805, 2009, 2293
AhdI	GACNNNNNGTC	1 cut(s)	103
AjnI	CCWGG	3 cut(s)	603, 1633, 2306
AjuI	GAANNNNNNNTTGG	2 cut(s)	1368, 1400
AloI	GAACNNNNNNTCC	2 cut(s)	2132, 2164
Alw21I	GWGCWC	1 cut(s)	1278
Alw26I	GTCTC	4 cut(s)	96, 208, 585, 872
AlwI	GGATC	3 cut(s)	57, 149, 836
AlwNI	CAGNNNCTG	3 cut(s)	680, 863, 2231
Ama87I	CYCGRG	2 cut(s)	509, 1128
AoxI	GGCC	2 cut(s)	790, 1518
ApeKI	GCWGC	9 cut(s)	230, 707, 1097, 1124, 1284, 1577, 2189, 2225, 2228
ApoI	RAATTY	5 cut(s)	551, 652, 1160, 2087, 2130
Asp700I	GAANNNNTTC	4 cut(s)	204, 1383, 1674, 1733
AspLEI	GCGC	1 cut(s)	302
AspS9I	GGNCC	4 cut(s)	1372, 1519, 1619, 1753
AsuC2I	CCSGG	2 cut(s)	979, 1871
AsuHPI	GGTGA	4 cut(s)	766, 1555, 1679, 2227
AvaI	CYCGRG	2 cut(s)	509, 1128
AvaII	GGWCC	3 cut(s)	1372, 1619, 1753
AxyI	CCTNAGG	1 cut(s)	2153
BaeGI	GKGCMC	2 cut(s)	984, 1405
BanI	GGYRCC	1 cut(s)	16
BanII	GRGCYC	1 cut(s)	2265
BarI	GAAGNNNNNNTAC	2 cut(s)	192, 224
BauI	CACGAG	1 cut(s)	1511
Bbv12I	GWGCWC	1 cut(s)	1278
BbvCI	CCTCAGC	1 cut(s)	702
BbvI	GCAGC	9 cut(s)	217, 694, 1084, 1111, 1296, 1564, 2176, 2237, 2240
BccI	CCATC	7 cut(s)	143, 337, 395, 1069, 1559, 1986, 2276
BceAI	ACGGC	1 cut(s)	2177
BciT130I	CCWGG	3 cut(s)	605, 1635, 2308
BciVI	GTATCC	1 cut(s)	934
BcnI	CCSGG	2 cut(s)	979, 1871
BcoDI	GTCTC	4 cut(s)	96, 208, 585, 872
BfaI	CTAG	8 cut(s)	393, 504, 1037, 1212, 1319, 1956, 1982, 2332
BfmI	CTRYAG	1 cut(s)	209
BfrI	CTTAAG	2 cut(s)	719, 800
BfuAI	ACCTGC	1 cut(s)	508
BfuI	GTATCC	1 cut(s)	934
BglII	AGATCT	1 cut(s)	1030
BlpI	GCTNAGC	2 cut(s)	1660, 2232
Bme1390I	CCNGG	5 cut(s)	605, 979, 1635, 1871, 2308
Bme18I	GGWCC	3 cut(s)	1372, 1619, 1753
BmeRI	GACNNNNNGTC	1 cut(s)	103
BmeT110I	CYCGRG	2 cut(s)	509, 1128
BmgT120I	GGNCC	4 cut(s)	1372, 1519, 1619, 1753
BmiI	GGNNCC	4 cut(s)	18, 1373, 1754, 1767
BmrFI	CCNGG	5 cut(s)	605, 979, 1635, 1871, 2308
BmrI	ACTGGG	1 cut(s)	731
BmsI	GCATC	7 cut(s)	121, 181, 460, 528, 532, 629, 1180
BmuI	ACTGGG	1 cut(s)	731
BpmI	CTGGAG	3 cut(s)	1139, 1274, 1656
Bpu10I	CCTNAGC	1 cut(s)	702
Bpu1102I	GCTNAGC	2 cut(s)	1660, 2232
BpuEI	CTTGAG	2 cut(s)	389, 785
BpuMI	CCSGG	2 cut(s)	979, 1871
BsaJI	CCNNGG	5 cut(s)	1279, 1566, 1849, 2055, 2307
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	5 cut(s)	1516, 1663, 1762, 1902, 1969
Bse1I	ACTGG	5 cut(s)	163, 737, 834, 1305, 1449
Bse21I	CCTNAGG	1 cut(s)	2153
Bse3DI	GCAATG	1 cut(s)	826
BseBI	CCWGG	3 cut(s)	605, 1635, 2308
BseDI	CCNNGG	5 cut(s)	1279, 1566, 1849, 2055, 2307
BseGI	GGATG	6 cut(s)	10, 48, 348, 1084, 1297, 1551
BseLI	CCNNNNNNNGG	5 cut(s)	1516, 1663, 1762, 1902, 1969
BseMI	GCAATG	1 cut(s)	826
BseMII	CTCAG	8 cut(s)	225, 414, 687, 693, 987, 1674, 1718, 2223
BseNI	ACTGG	5 cut(s)	163, 737, 834, 1305, 1449
BseRI	GAGGAG	2 cut(s)	167, 586
BseSI	GKGCMC	2 cut(s)	984, 1405
BseXI	GCAGC	9 cut(s)	217, 694, 1084, 1111, 1296, 1564, 2176, 2237, 2240
BseYI	CCCAGC	1 cut(s)	1499
BsgI	GTGCAG	2 cut(s)	855, 1664
Bsh1236I	CGCG	3 cut(s)	302, 921, 1773
BshFI	GGCC	2 cut(s)	792, 1520
BshNI	GGYRCC	1 cut(s)	16
BsiHKAI	GWGCWC	1 cut(s)	1278
BsiHKCI	CYCGRG	2 cut(s)	509, 1128
BsiSI	CCGG	2 cut(s)	978, 1870
BslI	CCNNNNNNNGG	5 cut(s)	1516, 1663, 1762, 1902, 1969
BsmAI	GTCTC	4 cut(s)	96, 208, 585, 872
BsmBI	CGTCTC	1 cut(s)	96
BsmI	GAATGC	1 cut(s)	1854
BsnI	GGCC	2 cut(s)	792, 1520
BsoBI	CYCGRG	2 cut(s)	509, 1128
Bsp1286I	GDGCHC	4 cut(s)	984, 1278, 1405, 2265
Bsp143I	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
Bsp1720I	GCTNAGC	2 cut(s)	1660, 2232
BspANI	GGCC	2 cut(s)	792, 1520
BspCNI	CTCAG	8 cut(s)	226, 415, 686, 694, 988, 1673, 1717, 2224
BspFNI	CGCG	3 cut(s)	302, 921, 1773
BspLI	GGNNCC	4 cut(s)	18, 1373, 1754, 1767
BspMI	ACCTGC	1 cut(s)	508
BspPI	GGATC	3 cut(s)	57, 149, 836
BspT107I	GGYRCC	1 cut(s)	16
BspTI	CTTAAG	2 cut(s)	719, 800
BsrBI	CCGCTC	2 cut(s)	1659, 2118
BsrDI	GCAATG	1 cut(s)	826
BsrI	ACTGG	5 cut(s)	163, 737, 834, 1305, 1449
BssECI	CCNNGG	5 cut(s)	1279, 1566, 1849, 2055, 2307
BssMI	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
BssNAI	GTATAC	1 cut(s)	274
BssSI	CACGAG	1 cut(s)	1511
BssT1I	CCWWGG	3 cut(s)	1279, 1849, 2055
Bst1107I	GTATAC	1 cut(s)	274
Bst2BI	CACGAG	1 cut(s)	1511
Bst2UI	CCWGG	3 cut(s)	605, 1635, 2308
Bst4CI	ACNGT	3 cut(s)	859, 1138, 2148
Bst6I	CTCTTC	4 cut(s)	32, 422, 1224, 1724
BstAFI	CTTAAG	2 cut(s)	719, 800
BstAPI	GCANNNNNTGC	1 cut(s)	1843
BstC8I	GCNNGC	7 cut(s)	618, 790, 960, 1518, 1964, 2081, 2265
BstF5I	GGATG	6 cut(s)	10, 48, 348, 1084, 1297, 1551
BstFNI	CGCG	3 cut(s)	302, 921, 1773
BstHHI	GCGC	1 cut(s)	302
BstKTI	GATC	6 cut(s)	52, 157, 496, 844, 1033, 1459
BstMAI	GTCTC	4 cut(s)	96, 208, 585, 872
BstMBI	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
BstMWI	GCNNNNNNNGC	8 cut(s)	664, 707, 721, 911, 1843, 1866, 1887, 2076
BstNI	CCWGG	3 cut(s)	605, 1635, 2308
BstNSI	RCATGY	2 cut(s)	172, 221
BstSCI	CCNGG	5 cut(s)	603, 977, 1633, 1869, 2306
BstSFI	CTRYAG	1 cut(s)	209
BstSLI	GKGCMC	2 cut(s)	984, 1405
BstUI	CGCG	3 cut(s)	302, 921, 1773
BstV1I	GCAGC	9 cut(s)	217, 694, 1084, 1111, 1296, 1564, 2176, 2237, 2240
BstX2I	RGATCY	2 cut(s)	49, 1030
BstYI	RGATCY	2 cut(s)	49, 1030
BstZ17I	GTATAC	1 cut(s)	274
Bsu36I	CCTNAGG	1 cut(s)	2153
BsuI	GTATCC	1 cut(s)	934
BsuRI	GGCC	2 cut(s)	792, 1520
BtgZI	GCGATG	2 cut(s)	437, 1850
BtsCI	GGATG	6 cut(s)	10, 48, 348, 1084, 1297, 1551
BtsI	GCAGTG	2 cut(s)	1278, 1890
BtsIMutI	CAGTG	4 cut(s)	827, 993, 1278, 1890
BveI	ACCTGC	1 cut(s)	508
Cac8I	GCNNGC	7 cut(s)	618, 790, 960, 1518, 1964, 2081, 2265
CaiI	CAGNNNCTG	3 cut(s)	680, 863, 2231
CfoI	GCGC	1 cut(s)	302
Cfr13I	GGNCC	4 cut(s)	1372, 1519, 1619, 1753
Csp6I	GTAC	4 cut(s)	118, 166, 182, 1067
CviAII	CATG	4 cut(s)	169, 218, 875, 1288
CviQI	GTAC	4 cut(s)	118, 166, 182, 1067
DpnI	GATC	6 cut(s)	51, 156, 495, 843, 1032, 1458
DpnII	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
DraI	TTTAAA	1 cut(s)	2166
DriI	GACNNNNNGTC	1 cut(s)	103
Eam1104I	CTCTTC	4 cut(s)	32, 422, 1224, 1724
Eam1105I	GACNNNNNGTC	1 cut(s)	103
EarI	CTCTTC	4 cut(s)	32, 422, 1224, 1724
EciI	GGCGGA	2 cut(s)	1275, 1298
Eco130I	CCWWGG	3 cut(s)	1279, 1849, 2055
Eco24I	GRGCYC	1 cut(s)	2265
Eco32I	GATATC	1 cut(s)	1713
Eco47I	GGWCC	3 cut(s)	1372, 1619, 1753
Eco57I	CTGAAG	3 cut(s)	645, 779, 1381
Eco81I	CCTNAGG	1 cut(s)	2153
Eco88I	CYCGRG	2 cut(s)	509, 1128
EcoRII	CCWGG	3 cut(s)	603, 1633, 2306
EcoRV	GATATC	1 cut(s)	1713
EcoT14I	CCWWGG	3 cut(s)	1279, 1849, 2055
EcoT22I	ATGCAT	1 cut(s)	174
EcoT38I	GRGCYC	1 cut(s)	2265
ErhI	CCWWGG	3 cut(s)	1279, 1849, 2055
Esp3I	CGTCTC	1 cut(s)	96
FaeI	CATG	4 cut(s)	172, 221, 878, 1291
FalI	AAGNNNNNCTT	4 cut(s)	179, 211, 2146, 2178
FatI	CATG	4 cut(s)	168, 217, 874, 1287
FauI	CCCGC	3 cut(s)	1657, 1778, 2272
FauNDI	CATATG	3 cut(s)	535, 586, 1782
FblI	GTMKAC	1 cut(s)	273
FokI	GGATG	6 cut(s)	17, 55, 355, 1091, 1304, 1538
FriOI	GRGCYC	1 cut(s)	2265
FspBI	CTAG	8 cut(s)	393, 504, 1037, 1212, 1319, 1956, 1982, 2332
GlaI	GCGC	1 cut(s)	301
GsaI	CCCAGC	1 cut(s)	1503
GsuI	CTGGAG	3 cut(s)	1139, 1274, 1656
HaeIII	GGCC	2 cut(s)	792, 1520
HapII	CCGG	2 cut(s)	978, 1870
HhaI	GCGC	1 cut(s)	302
Hin1II	CATG	4 cut(s)	172, 221, 878, 1291
Hin6I	GCGC	1 cut(s)	300
HinP1I	GCGC	1 cut(s)	300
HincII	GTYRAC	3 cut(s)	409, 742, 2197
HindII	GTYRAC	3 cut(s)	409, 742, 2197
HindIII	AAGCTT	2 cut(s)	956, 2077
HpaII	CCGG	2 cut(s)	978, 1870
HphI	GGTGA	4 cut(s)	766, 1555, 1679, 2227
Hpy166II	GTNNAC	7 cut(s)	10, 184, 274, 409, 742, 1737, 2197
Hpy8I	GTNNAC	7 cut(s)	10, 184, 274, 409, 742, 1737, 2197
HpyAV	CCTTC	9 cut(s)	90, 160, 194, 476, 803, 855, 1213, 1373, 1403
HpyCH4III	ACNGT	3 cut(s)	859, 1138, 2148
HpyF10VI	GCNNNNNNNGC	8 cut(s)	664, 707, 721, 911, 1843, 1866, 1887, 2076
Hsp92II	CATG	4 cut(s)	172, 221, 878, 1291
HspAI	GCGC	1 cut(s)	300
Kzo9I	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
LmnI	GCTCC	5 cut(s)	369, 563, 1281, 1905, 2115
Lsp1109I	GCAGC	9 cut(s)	217, 694, 1084, 1111, 1296, 1564, 2176, 2237, 2240
LweI	GCATC	7 cut(s)	121, 181, 460, 528, 532, 629, 1180
MaeI	CTAG	8 cut(s)	393, 504, 1037, 1212, 1319, 1956, 1982, 2332
MaeIII	GTNAC	4 cut(s)	634, 1132, 1412, 2047
MalI	GATC	6 cut(s)	51, 156, 495, 843, 1032, 1458
MbiI	CCGCTC	2 cut(s)	1659, 2118
MboI	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
MfeI	CAATTG	2 cut(s)	725, 2288
MflI	RGATCY	2 cut(s)	49, 1030
MhlI	GDGCHC	4 cut(s)	984, 1278, 1405, 2265
MlyI	GAGTC	5 cut(s)	92, 587, 2048, 2091, 2152
MmeI	TCCRAC	5 cut(s)	753, 1628, 1791, 1950, 2118
Mph1103I	ATGCAT	1 cut(s)	174
MroXI	GAANNNNTTC	4 cut(s)	204, 1383, 1674, 1733
MslI	CAYNNNNRTG	1 cut(s)	1694
MspA1I	CMGCKG	5 cut(s)	22, 1664, 1708, 1966, 2231
MspCI	CTTAAG	2 cut(s)	719, 800
MspI	CCGG	2 cut(s)	978, 1870
MspR9I	CCNGG	5 cut(s)	605, 979, 1635, 1871, 2308
MunI	CAATTG	2 cut(s)	725, 2288
Mva1269I	GAATGC	1 cut(s)	1854
MvaI	CCWGG	3 cut(s)	605, 1635, 2308
MvnI	CGCG	3 cut(s)	302, 921, 1773
MwoI	GCNNNNNNNGC	8 cut(s)	664, 707, 721, 911, 1843, 1866, 1887, 2076
NciI	CCSGG	2 cut(s)	979, 1871
NdeI	CATATG	3 cut(s)	535, 586, 1782
NdeII	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
NlaIII	CATG	4 cut(s)	172, 221, 878, 1291
NlaIV	GGNNCC	4 cut(s)	18, 1373, 1754, 1767
NmuCI	GTSAC	2 cut(s)	634, 1412
NsiI	ATGCAT	1 cut(s)	174
NspI	RCATGY	2 cut(s)	172, 221
PciI	ACATGT	1 cut(s)	217
PcsI	WCGNNNNNNNCGW	2 cut(s)	126, 2048
PctI	GAATGC	1 cut(s)	1854
PdmI	GAANNNNTTC	4 cut(s)	204, 1383, 1674, 1733
PfeI	GAWTC	7 cut(s)	244, 677, 683, 833, 935, 1560, 2121
PflMI	CCANNNNNTGG	1 cut(s)	1969
PfoI	TCCNGGA	2 cut(s)	603, 1633
PleI	GAGTC	5 cut(s)	92, 587, 2047, 2091, 2152
PpsI	GAGTC	5 cut(s)	92, 587, 2047, 2091, 2152
PscI	ACATGT	1 cut(s)	217
Psp6I	CCWGG	3 cut(s)	603, 1633, 2306
PspFI	CCCAGC	1 cut(s)	1499
PspGI	CCWGG	3 cut(s)	603, 1633, 2306
PspN4I	GGNNCC	4 cut(s)	18, 1373, 1754, 1767
PspPI	GGNCC	4 cut(s)	1372, 1519, 1619, 1753
PstNI	CAGNNNCTG	3 cut(s)	680, 863, 2231
PsuI	RGATCY	2 cut(s)	49, 1030
PvuII	CAGCTG	2 cut(s)	1966, 2231
RsaI	GTAC	4 cut(s)	119, 167, 183, 1068
RsaNI	GTAC	4 cut(s)	118, 166, 182, 1067
RseI	CAYNNNNRTG	1 cut(s)	1694
Sau3AI	GATC	6 cut(s)	49, 154, 493, 841, 1030, 1456
Sau96I	GGNCC	4 cut(s)	1372, 1519, 1619, 1753
SchI	GAGTC	5 cut(s)	92, 587, 2048, 2091, 2152
ScrFI	CCNGG	5 cut(s)	605, 979, 1635, 1871, 2308
SduI	GDGCHC	4 cut(s)	984, 1278, 1405, 2265
SfaNI	GCATC	7 cut(s)	121, 181, 460, 528, 532, 629, 1180
SfcI	CTRYAG	1 cut(s)	209
SinI	GGWCC	3 cut(s)	1372, 1619, 1753
SmiMI	CAYNNNNRTG	1 cut(s)	1694
SmlI	CTYRAG	4 cut(s)	368, 719, 764, 800
SmoI	CTYRAG	4 cut(s)	368, 719, 764, 800
SspI	AATATT	4 cut(s)	334, 576, 927, 2013
SspMI	CTAG	8 cut(s)	393, 504, 1037, 1212, 1319, 1956, 1982, 2332
StyD4I	CCNGG	5 cut(s)	603, 977, 1633, 1869, 2306
StyI	CCWWGG	3 cut(s)	1279, 1849, 2055
TaaI	ACNGT	3 cut(s)	859, 1138, 2148
TaqI	TCGA	3 cut(s)	59, 129, 153
TaqII	GACCGA	1 cut(s)	1926
TatI	WGTACW	2 cut(s)	165, 1066
TauI	GCSGC	1 cut(s)	22
TfiI	GAWTC	7 cut(s)	244, 677, 683, 833, 935, 1560, 2121
TscAI	CASTG	4 cut(s)	834, 1000, 1278, 1897
TseFI	GTSAC	2 cut(s)	634, 1412
TseI	GCWGC	9 cut(s)	230, 707, 1097, 1124, 1284, 1577, 2189, 2225, 2228
Tsp45I	GTSAC	2 cut(s)	634, 1412
TspDTI	ATGAA	7 cut(s)	338, 475, 1525, 1618, 1626, 1769, 2199
TspGWI	ACGGA	4 cut(s)	866, 899, 1632, 1899
TspRI	CASTG	4 cut(s)	834, 1000, 1278, 1897
Van91I	CCANNNNNTGG	1 cut(s)	1969
Vha464I	CTTAAG	2 cut(s)	719, 800
VpaK11BI	GGWCC	3 cut(s)	1372, 1619, 1753
XapI	RAATTY	5 cut(s)	551, 652, 1160, 2087, 2130
XbaI	TCTAGA	2 cut(s)	392, 1318
XceI	RCATGY	2 cut(s)	172, 221
XmiI	GTMKAC	1 cut(s)	273
XmnI	GAANNNNTTC	4 cut(s)	204, 1383, 1674, 1733
XspI	CTAG	8 cut(s)	393, 504, 1037, 1212, 1319, 1956, 1982, 2332
Zsp2I	ATGCAT	1 cut(s)	174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.