FvH4_6g01900

histone lysine demethylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005155
Physical Location & Seq
Reverse (-)
1048364 .. 1059470
11107 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01900.t8

Sequence Viewer

Length: 3429 bp
ATGCAGGGATTTGCGGAGAGAGGTAATTCTGGGGACTTGGGGCAGCTCCAGTCCACCATGCACGCCATTGAGCTCGCCTGTACTTCTATTCAGATGCAGATGAATTTAGGTGCTGCTGAAGCTACTATTTTGTCACTCTCCCAGGCTCCTCAACCATACCAGACATGTAAATTCATTCTTGAGAACTCTCAGATGGCAAATGCAAGGTTTCAGGCTGCAGCTGCAATTCGTGATGCAGCTATTAGAGAATGGGGTTTTCTTAGCTCAGATGAAAAGAGAAGCATGATTAGTTTTTGTCTTTGTTTTGTTATGCAACATGCGCATTCACCTGAGGGTTATGTCCAAGCAAAAGTGTCCTCTGTGGCTGCTCAATTGTTGAAAAGGGGTTGGCTTGATTTCTCAGCTGCTGAGAAGGATGAATTTTTCTATCAGGTAAACCAGGCTGTTTATGGCATTCACGGTGTAGATGTGCAGTTTGCTGGAGTTAATTTCCTGGAATCTCTGGTGTCCGAATTTTCTCCATCTACTTCTAGTGTGATGGGTCTACCTAGAGAGTTTCATGAGCATTGCAGGAAATCATTAGAGGTAGACCACTTGAAGACTTTCTATTGCTGGGCACGAGATGCTGCATTAAGTGTTACAAATAGAATAGTTGAGTCTGACTCTGCGGTACCAGAGGTTAAAGTCTGTACTTCTGCACTGCGTCTCATGCTTCAAATCCTGAACTGGGAGTTCAGTCCAATTGCAGTCCCTCTTGGAGTTCGGATGGGTACTGATTCACCTAAGAGATCTGAGTGTAATCTAGTGCAGCCTGGACCTGCTTGGCGTGAAGTTTTGGTTACTAGTGGTCATATAGGTTGGCTCCTGAACTTATATGCAGCACTGAGACAGAAGTTTTCTTGTGAAGGTTATTGGCTCGATTGCCCTGTTGCCGTCTCTGCTAGAAAGTTAGTAGTACAGTTCTGCTCCTTAACAGGAACCATATTTTCATCTGTACAAATGCATGAACACCATCTGCTCCAACTGCTTTCCGGAGTAATACAGTGGATTGATCCTCCTGATGCTGTTTCTAGAGCGATTGAATGTGGAAAAAGTGAAAGCGAGATGCTTGATGGTTGTCGTGCTTTATTGTCAATTGCAACTGTTACAACTCCGTCAACATTTGACCAACTCTTAAAATCAACAAGGTCTTATGGCACTCTTACCTTGTTATGCATATTGATGTCTGAAGTTGTCAAGAACCTAATGACCAACAACTCTGAAGAAGAGACTTGGAGCTGGGAGGCACGCGATATATTACTAGATACTTGGACTGCACTCCTTGTGCCAGTAAATAGCGACGGTGGAAATGCATCCCTTCCACCTGAAGGGAAAAATGCTACAGCCAGTTTATTTGCCTTGATTGTACAGGCTGAACTGAAAGCTGCTTCTGCATCAGCATTTAAAGATGATGACTCTGACTACCTTCAGGCCTCTATTTCTGCCTTGGATGAGAGGCTAGGCTCCTATGCTCTAATTGGTAGAACAGCAATTGAGGTCACAGTACCTTTTCTCACAAGACTATTTTCGGAGCGTTTTGAACGGCTTAATCAGGGCAGGGGCATTATTGATCCTACTGAAACTTTAGAGGAACTTTACTCCTTGCTACTTATCACTGGGCACGTAATCGCTGATGAAGGGGAGGGAGAAACACCTCTGATTCCAAATGCTATACGATTTCATCTTCCACACAATCTGGAAGCAGACACGCATCCTATTGTCATCCTTTGTGGCTCAATCATAAGGTTTGCCGAGGAAAGTTTAAAACCAGAAATGAGAGCATCAGTTTTCAGTCCCAGACTCATGGAGGCTGTCATATGGTTCCTTGCTAGATGGTCTTGTACTTACCTAATGTCTCCTGAAGAAAGTCGAGACTCTACAACCGTCTTGCTAAAGTTTTTCGGACAACAGGGTCAAGGAAAATTGGTGCTAGACATAATTGTTCGCATATCCTTGACAGCGCTGGTGTCATATCCTGGAGAAAAGTATCTGCAGGCGCTTACTTGTTTCCAGCTACTTCACACGCTTGTTCAGCGAAAACATATTTGCATTCATCTTGTTGCTTTGGATTCATGGCGTGACCTTTCAAATGCTTTTGCTAATGAAAAAACTTTGTTCTTGCTAAATACAGCTCATCAGCGTTCCCTTGCTCAAACACTAGTTCGGTCAGCTTCTGGTCTGAGAAATTTGGAGGCATCAAACCAGTACGTTAGGGATCTCATGGGACATATGGCAACATATCTAGTTGAAATCACAAGCAAAAACGACTTCAAAAACGTTGCTCAACAACCAGATATCATCCTGCCGGTCAGTTGCTTGTTGGAAAGGCTTCGTGGGGCTGCCAGTGCCTCAGAACCTCGTTTGCAGAAAGCAATTTATGAGCTGGGATTCTCTGCAATGAATCCTGTTCTGGTTCTTCTTGAGGTTTACAAACATGAGTCTGCAGTTGTATATCTGCTACTCAAGTTTGTAGTTGATTGGGTGGATGGACAAATAAGCTATCTAGAGGCTCAGGAAACTGCTGTTGTTGTCAATTTCTGCATGAGTTTGCTTCGTCTTTATTCAGCAAACAATATTGGCAAGATATCAATAAGTTTATCAAGCAGCTTAAGCACTGAAGCAAAGACTGAGAAGTACAAGGATTTGCGTGCTCTACTCCAGCTCCTTTCAGGCCTTTGTTCCAAAGATTTGGTTGATTTTTCATCAGATTCCACTGAGACGGAGAGCACGAACATATCTCAGGTCGTTTACTTCGGTCTTCATATAGTTACTCCTCTAATATCATTGGAGCTGCTGAAATACCCCAAGTTTTGTTTTGATTACTTCTCATTGATCTCCCATATGTTGGAGGTCTATCCTGAAACAGTTGCACAACTAAGCAGTGAAGCCTTTTCTCATGTAATAGGAACCCTTGATTTTGGTCTTCAACATCAGGATGCCGAAGTTGTTGATATGTGTCTCAGAGCTTTAAGAGCTCTTGCTTCTTATCACCATAAGGAAACAAGTGCTGGCAAAGTAGGCTTGGGCTCACATGCTGCAGGCCTCAAGGATCCTGGTGGAAATTTTCAGGAAGGCATTTTGAGCCGGTTCCTTCGCTCAGTACTGCAATTACTACTTTTTGGGGATTACAGTCCTGACCTGGTCAGCAGTGCAGCAGATGCTCTTCTTCCGCTGATACTTTGTGAGCAAAGCCTATACCAGAAATTAGGTAATGAGTTGATAGAGAGGCAGGCAAATGAAACATTGAAATCAAGACTATCAAATGCGTTGCGGACTCTCACAAGTGCAAATCAGCTTTCATCTACCATTGATCGTAAAAACTGTCAAATATTCAGGAAAAATCTTAGTAACTTCTTGGTTGATGTTCGAGGTTTTCTGCGAACAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRM1_C

Protein Analysis

1143

Amino Acids

126.72

Weight (kDa)

5.6

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRM1_C PF08767 969 - 1043 3.5e-06 CRM1 C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1950
Acc16I TGCGCA 1 cut(s) 321
Acc36I ACCTGC 1 cut(s) 826
Acc65I GGTACC 1 cut(s) 670
AccB1I GGYRCC 1 cut(s) 670
AccB7I CCANNNNNTGG 1 cut(s) 2884
AccI GTMKAC 2 cut(s) 544, 588
AccII CGCG 1 cut(s) 1290
AccIII TCCGGA 1 cut(s) 1031
AciI CCGC 4 cut(s) 14, 668, 3209, 3310
AclI AACGTT 1 cut(s) 2316
AclWI GGATC 5 cut(s) 1046, 1604, 2262, 3083, 3096
AcsI RAATTY 6 cut(s) 103, 170, 419, 512, 2224, 3100
AcuI CTGAAG 7 cut(s) 138, 1248, 1281, 1386, 1451, 1920, 2676
AfeI AGCGCT 1 cut(s) 2001
AfiI CCNNNNNNNGG 3 cut(s) 727, 1367, 2884
AflII CTTAAG 1 cut(s) 2647
AflIII ACRYGT 1 cut(s) 164
AhlI ACTAGT 2 cut(s) 842, 2197
AjnI CCWGG 7 cut(s) 141, 438, 492, 811, 2014, 3091, 3177
Alw21I GWGCWC 4 cut(s) 75, 2692, 2768, 3016
Alw26I GTCTC 8 cut(s) 710, 880, 940, 1262, 1899, 1905, 2750, 3002
AlwI GGATC 5 cut(s) 1046, 1604, 2262, 3083, 3096
AlwNI CAGNNNCTG 2 cut(s) 407, 2213
Aor13HI TCCGGA 1 cut(s) 1031
Aor51HI AGCGCT 1 cut(s) 2001
AoxI GGCC 3 cut(s) 1470, 2710, 3079
ApoI RAATTY 6 cut(s) 103, 170, 419, 512, 2224, 3100
Asp700I GAANNNNTTC 2 cut(s) 602, 2367
Asp718I GGTACC 1 cut(s) 670
AspLEI GCGC 3 cut(s) 322, 2002, 2038
AspS9I GGNCC 1 cut(s) 815
AsuHPI GGTGA 3 cut(s) 318, 771, 3020
AvaII GGWCC 1 cut(s) 815
AxyI CCTNAGG 1 cut(s) 330
BaeGI GKGCMC 2 cut(s) 619, 1662
BamHI GGATCC 1 cut(s) 3088
BanI GGYRCC 1 cut(s) 670
BanII GRGCYC 3 cut(s) 75, 3016, 3068
BauI CACGAG 1 cut(s) 618
BbsI GAAGAC 3 cut(s) 605, 2789, 2954
Bbv12I GWGCWC 4 cut(s) 75, 2692, 2768, 3016
BccI CCATC 8 cut(s) 187, 529, 532, 760, 1020, 1106, 1866, 2519
BceAI ACGGC 2 cut(s) 917, 1598
BciT130I CCWGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
BcoDI GTCTC 8 cut(s) 710, 880, 940, 1262, 1899, 1905, 2750, 3002
BcuI ACTAGT 2 cut(s) 842, 2197
BfmI CTRYAG 5 cut(s) 216, 1380, 2030, 2481, 3075
BfoI RGCGCY 2 cut(s) 2003, 2039
BfrI CTTAAG 1 cut(s) 2647
BfuAI ACCTGC 1 cut(s) 826
BglII AGATCT 1 cut(s) 788
BmcAI AGTACT 1 cut(s) 3141
Bme1390I CCNGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
Bme18I GGWCC 1 cut(s) 815
BmgT120I GGNCC 1 cut(s) 815
BmiI GGNNCC 9 cut(s) 147, 672, 863, 979, 1504, 1862, 2947, 3090, 3128
BmrFI CCNGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
BmrI ACTGGG 2 cut(s) 736, 1665
BmuI ACTGGG 2 cut(s) 736, 1665
BpiI GAAGAC 3 cut(s) 605, 2789, 2954
BplI GAGNNNNNCTC 2 cut(s) 647, 679
BpmI CTGGAG 4 cut(s) 32, 501, 2037, 2681
Bpu10I CCTNAGC 1 cut(s) 2550
BpuEI CTTGAG 4 cut(s) 200, 2480, 2486, 3068
BsaAI YACGTR 1 cut(s) 1663
BsaJI CCNNGG 3 cut(s) 141, 1485, 1791
BsaWI WCCGGW 1 cut(s) 1031
BsaXI ACNNNNNCTCC 2 cut(s) 2685, 2715
Bsc4I CCNNNNNNNGG 3 cut(s) 727, 1367, 2884
Bse118I RCCGGY 2 cut(s) 2344, 3123
Bse1I ACTGG 7 cut(s) 49, 731, 1328, 1386, 1660, 2242, 2382
Bse21I CCTNAGG 1 cut(s) 330
Bse3DI GCAATG 2 cut(s) 565, 2442
BseAI TCCGGA 1 cut(s) 1031
BseBI CCWGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
BseDI CCNNGG 3 cut(s) 141, 1485, 1791
BseGI GGATG 9 cut(s) 421, 771, 1352, 1495, 1750, 1761, 2337, 2530, 2980
BseLI CCNNNNNNNGG 3 cut(s) 727, 1367, 2884
BseMI GCAATG 2 cut(s) 565, 2442
BseNI ACTGG 7 cut(s) 49, 731, 1328, 1386, 1660, 2242, 2382
BseRI GAGGAG 2 cut(s) 138, 2802
BseSI GKGCMC 2 cut(s) 619, 1662
BseYI CCCAGC 3 cut(s) 612, 1278, 2422
BsgI GTGCAG 5 cut(s) 491, 681, 827, 1299, 3210
Bsh1236I CGCG 1 cut(s) 1290
BshFI GGCC 3 cut(s) 1472, 2712, 3081
BshNI GGYRCC 1 cut(s) 670
BsiHKAI GWGCWC 4 cut(s) 75, 2692, 2768, 3016
BsiSI CCGG 3 cut(s) 1032, 2345, 3124
BslFI GGGAC 4 cut(s) 47, 734, 1818, 2277
BslI CCNNNNNNNGG 3 cut(s) 727, 1367, 2884
BsmAI GTCTC 8 cut(s) 710, 880, 940, 1262, 1899, 1905, 2750, 3002
BsmBI CGTCTC 3 cut(s) 710, 940, 2750
BsmFI GGGAC 4 cut(s) 47, 734, 1818, 2277
BsmI GAATGC 3 cut(s) 322, 453, 2088
BsnI GGCC 3 cut(s) 1472, 2712, 3081
Bsp1286I GDGCHC 7 cut(s) 75, 619, 1662, 2692, 2768, 3016, 3068
Bsp13I TCCGGA 1 cut(s) 1031
Bsp1407I TGTACA 2 cut(s) 994, 1405
Bsp143I GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
BspACI CCGC 4 cut(s) 14, 668, 3209, 3310
BspANI GGCC 3 cut(s) 1472, 2712, 3081
BspEI TCCGGA 1 cut(s) 1031
BspFNI CGCG 1 cut(s) 1290
BspHI TCATGA 1 cut(s) 559
BspLI GGNNCC 9 cut(s) 147, 672, 863, 979, 1504, 1862, 2947, 3090, 3128
BspMAI CTGCAG 4 cut(s) 220, 2034, 2485, 3079
BspMI ACCTGC 1 cut(s) 826
BspPI GGATC 5 cut(s) 1046, 1604, 2262, 3083, 3096
BspQI GCTCTTC 1 cut(s) 3207
BspT107I GGYRCC 1 cut(s) 670
BspTI CTTAAG 1 cut(s) 2647
BsrDI GCAATG 2 cut(s) 565, 2442
BsrFI RCCGGY 2 cut(s) 2344, 3123
BsrGI TGTACA 2 cut(s) 994, 1405
BsrI ACTGG 7 cut(s) 49, 731, 1328, 1386, 1660, 2242, 2382
BssAI RCCGGY 2 cut(s) 2344, 3123
BssECI CCNNGG 3 cut(s) 141, 1485, 1791
BssMI GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
BssSI CACGAG 1 cut(s) 618
BssT1I CCWWGG 1 cut(s) 1485
Bst2BI CACGAG 1 cut(s) 618
Bst2UI CCWGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
Bst6I CTCTTC 2 cut(s) 1260, 3207
BstAFI CTTAAG 1 cut(s) 2647
BstAPI GCANNNNNTGC 2 cut(s) 623, 3197
BstAUI TGTACA 2 cut(s) 994, 1405
BstBAI YACGTR 1 cut(s) 1663
BstC8I GCNNGC 8 cut(s) 63, 75, 1288, 2034, 2688, 3049, 3079, 3270
BstF5I GGATG 9 cut(s) 421, 771, 1352, 1495, 1750, 1761, 2337, 2530, 2980
BstFNI CGCG 1 cut(s) 1290
BstH2I RGCGCY 2 cut(s) 2003, 2039
BstHHI GCGC 3 cut(s) 322, 2002, 2038
BstKTI GATC 7 cut(s) 791, 1054, 1612, 2257, 2874, 3091, 3352
BstMAI GTCTC 8 cut(s) 710, 880, 940, 1262, 1899, 1905, 2750, 3002
BstMBI GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
BstNI CCWGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
BstNSI RCATGY 3 cut(s) 168, 320, 3074
BstSCI CCNGG 7 cut(s) 141, 438, 492, 811, 2014, 3091, 3177
BstSFI CTRYAG 5 cut(s) 216, 1380, 2030, 2481, 3075
BstSLI GKGCMC 2 cut(s) 619, 1662
BstUI CGCG 1 cut(s) 1290
BstV2I GAAGAC 3 cut(s) 605, 2789, 2954
BstX2I RGATCY 3 cut(s) 788, 2254, 3088
BstXI CCANNNNNNTGG 2 cut(s) 1843, 2728
BstYI RGATCY 3 cut(s) 788, 2254, 3088
Bsu36I CCTNAGG 1 cut(s) 330
BsuRI GGCC 3 cut(s) 1472, 2712, 3081
BtsCI GGATG 9 cut(s) 421, 771, 1352, 1495, 1750, 1761, 2337, 2530, 2980
BtsI GCAGTG 3 cut(s) 698, 2926, 3193
BtsIMutI CAGTG 9 cut(s) 698, 881, 1049, 1653, 2389, 2652, 2751, 2926, 3193
BveI ACCTGC 1 cut(s) 826
Cac8I GCNNGC 8 cut(s) 63, 75, 1288, 2034, 2688, 3049, 3079, 3270
CaiI CAGNNNCTG 2 cut(s) 407, 2213
CciI TCATGA 1 cut(s) 559
CfoI GCGC 3 cut(s) 322, 2002, 2038
Cfr10I RCCGGY 2 cut(s) 2344, 3123
Cfr13I GGNCC 1 cut(s) 815
CseI GACGC 1 cut(s) 692
CsiI ACCWGGT 1 cut(s) 3177
DpnI GATC 7 cut(s) 790, 1053, 1611, 2256, 2873, 3090, 3351
DpnII GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
DraI TTTAAA 2 cut(s) 1444, 1803
DrdI GACNNNNNNGTC 1 cut(s) 1950
DseDI GACNNNNNNGTC 1 cut(s) 1950
Eam1104I CTCTTC 2 cut(s) 1260, 3207
EarI CTCTTC 2 cut(s) 1260, 3207
Ecl136II GAGCTC 2 cut(s) 73, 3014
Eco130I CCWWGG 1 cut(s) 1485
Eco147I AGGCCT 3 cut(s) 1472, 2712, 3081
Eco24I GRGCYC 3 cut(s) 75, 3016, 3068
Eco32I GATATC 2 cut(s) 2335, 2625
Eco47I GGWCC 1 cut(s) 815
Eco47III AGCGCT 1 cut(s) 2001
Eco53kI GAGCTC 2 cut(s) 73, 3014
Eco57I CTGAAG 7 cut(s) 138, 1248, 1281, 1386, 1451, 1920, 2676
Eco81I CCTNAGG 1 cut(s) 330
EcoICRI GAGCTC 2 cut(s) 73, 3014
EcoRII CCWGG 7 cut(s) 141, 438, 492, 811, 2014, 3091, 3177
EcoRV GATATC 2 cut(s) 2335, 2625
EcoT14I CCWWGG 1 cut(s) 1485
EcoT22I ATGCAT 3 cut(s) 1005, 1217, 1354
EcoT38I GRGCYC 3 cut(s) 75, 3016, 3068
ErhI CCWWGG 1 cut(s) 1485
Esp3I CGTCTC 3 cut(s) 710, 940, 2750
FaqI GGGAC 4 cut(s) 47, 734, 1818, 2277
FauNDI CATATG 3 cut(s) 1856, 2268, 2880
FblI GTMKAC 2 cut(s) 544, 588
FokI GGATG 9 cut(s) 428, 778, 1339, 1502, 1737, 1748, 2324, 2537, 2987
FriOI GRGCYC 3 cut(s) 75, 3016, 3068
FspAI RTGCGCAY 1 cut(s) 321
FspI TGCGCA 1 cut(s) 321
GlaI GCGC 3 cut(s) 321, 2001, 2037
GsaI CCCAGC 3 cut(s) 616, 1282, 2426
GsuI CTGGAG 4 cut(s) 32, 501, 2037, 2681
HaeII RGCGCY 2 cut(s) 2003, 2039
HaeIII GGCC 3 cut(s) 1472, 2712, 3081
HapII CCGG 3 cut(s) 1032, 2345, 3124
HgaI GACGC 1 cut(s) 692
HhaI GCGC 3 cut(s) 322, 2002, 2038
Hin6I GCGC 3 cut(s) 320, 2000, 2036
HinP1I GCGC 3 cut(s) 320, 2000, 2036
HincII GTYRAC 1 cut(s) 1158
HindII GTYRAC 1 cut(s) 1158
HpaII CCGG 3 cut(s) 1032, 2345, 3124
HphI GGTGA 3 cut(s) 318, 771, 3020
Hpy166II GTNNAC 7 cut(s) 54, 436, 545, 589, 1158, 2467, 2788
Hpy8I GTNNAC 7 cut(s) 54, 436, 545, 589, 1158, 2467, 2788
Hpy99I CGWCG 1 cut(s) 1343
HpyAV CCTTC 8 cut(s) 406, 899, 1361, 1367, 1475, 1670, 3104, 3140
HpyCH4IV ACGT 3 cut(s) 1662, 2247, 2316
HpySE526I ACGT 3 cut(s) 1662, 2247, 2316
HspAI GCGC 3 cut(s) 320, 2000, 2036
Kpn2I TCCGGA 1 cut(s) 1031
KpnI GGTACC 1 cut(s) 674
Kzo9I GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
LguI GCTCTTC 1 cut(s) 3207
MabI ACCWGGT 1 cut(s) 3177
MaeII ACGT 3 cut(s) 1662, 2247, 2316
MaeIII GTNAC 8 cut(s) 132, 637, 838, 1144, 1537, 2117, 2806, 3386
MalI GATC 7 cut(s) 790, 1053, 1611, 2256, 2873, 3090, 3351
MboI GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
MfeI CAATTG 4 cut(s) 371, 741, 1134, 1530
MflI RGATCY 3 cut(s) 788, 2254, 3088
MhlI GDGCHC 7 cut(s) 75, 619, 1662, 2692, 2768, 3016, 3068
MlyI GAGTC 7 cut(s) 656, 665, 1448, 1833, 1907, 2486, 3307
MmeI TCCRAC 3 cut(s) 1045, 2340, 2865
Mph1103I ATGCAT 3 cut(s) 1005, 1217, 1354
MroI TCCGGA 1 cut(s) 1031
MroXI GAANNNNTTC 2 cut(s) 602, 2367
MslI CAYNNNNRTG 2 cut(s) 1220, 2973
MspA1I CMGCKG 3 cut(s) 221, 404, 3211
MspCI CTTAAG 1 cut(s) 2647
MspI CCGG 3 cut(s) 1032, 2345, 3124
MspR9I CCNGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
MunI CAATTG 4 cut(s) 371, 741, 1134, 1530
Mva1269I GAATGC 3 cut(s) 322, 453, 2088
MvaI CCWGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
MvnI CGCG 1 cut(s) 1290
NdeI CATATG 3 cut(s) 1856, 2268, 2880
NdeII GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
NlaIV GGNNCC 9 cut(s) 147, 672, 863, 979, 1504, 1862, 2947, 3090, 3128
NmeAIII GCCGAG 1 cut(s) 1816
NmuCI GTSAC 3 cut(s) 132, 1537, 2117
NsbI TGCGCA 1 cut(s) 321
NsiI ATGCAT 3 cut(s) 1005, 1217, 1354
NspI RCATGY 3 cut(s) 168, 320, 3074
PagI TCATGA 1 cut(s) 559
PceI AGGCCT 3 cut(s) 1472, 2712, 3081
PciI ACATGT 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 3207
PcsI WCGNNNNNNNCGW 1 cut(s) 2765
PctI GAATGC 3 cut(s) 322, 453, 2088
PdmI GAANNNNTTC 2 cut(s) 602, 2367
PfeI GAWTC 7 cut(s) 497, 776, 1699, 2108, 2427, 2440, 2747
PflFI GACNNNGTC 1 cut(s) 3179
PflMI CCANNNNNTGG 1 cut(s) 2884
PfoI TCCNGGA 2 cut(s) 492, 2014
PleI GAGTC 7 cut(s) 656, 664, 1448, 1833, 1907, 2485, 3307
PpsI GAGTC 7 cut(s) 656, 664, 1448, 1833, 1907, 2485, 3307
Ppu21I YACGTR 1 cut(s) 1663
PscI ACATGT 1 cut(s) 164
Psp124BI GAGCTC 2 cut(s) 75, 3016
Psp1406I AACGTT 1 cut(s) 2316
Psp6I CCWGG 7 cut(s) 141, 438, 492, 811, 2014, 3091, 3177
PspFI CCCAGC 3 cut(s) 612, 1278, 2422
PspGI CCWGG 7 cut(s) 141, 438, 492, 811, 2014, 3091, 3177
PspN4I GGNNCC 9 cut(s) 147, 672, 863, 979, 1504, 1862, 2947, 3090, 3128
PspPI GGNCC 1 cut(s) 815
PstI CTGCAG 4 cut(s) 220, 2034, 2485, 3079
PstNI CAGNNNCTG 2 cut(s) 407, 2213
PsuI RGATCY 3 cut(s) 788, 2254, 3088
PsyI GACNNNGTC 1 cut(s) 3179
PvuII CAGCTG 2 cut(s) 221, 404
RseI CAYNNNNRTG 2 cut(s) 1220, 2973
SacI GAGCTC 2 cut(s) 75, 3016
SapI GCTCTTC 1 cut(s) 3207
Sau3AI GATC 7 cut(s) 788, 1051, 1609, 2254, 2871, 3088, 3349
Sau96I GGNCC 1 cut(s) 815
ScaI AGTACT 1 cut(s) 3141
SchI GAGTC 7 cut(s) 656, 665, 1448, 1833, 1907, 2486, 3307
ScrFI CCNGG 7 cut(s) 143, 440, 494, 813, 2016, 3093, 3179
SduI GDGCHC 7 cut(s) 75, 619, 1662, 2692, 2768, 3016, 3068
SexAI ACCWGGT 1 cut(s) 3177
SfcI CTRYAG 5 cut(s) 216, 1380, 2030, 2481, 3075
SinI GGWCC 1 cut(s) 815
SmiMI CAYNNNNRTG 2 cut(s) 1220, 2973
SmlI CTYRAG 5 cut(s) 179, 2459, 2501, 2647, 3083
SmoI CTYRAG 5 cut(s) 179, 2459, 2501, 2647, 3083
SpeI ACTAGT 2 cut(s) 842, 2197
SseBI AGGCCT 3 cut(s) 1472, 2712, 3081
SsiI CCGC 4 cut(s) 14, 668, 3209, 3310
SspI AATATT 2 cut(s) 2614, 3369
SstI GAGCTC 2 cut(s) 75, 3016
StuI AGGCCT 3 cut(s) 1472, 2712, 3081
StyD4I CCNGG 7 cut(s) 141, 438, 492, 811, 2014, 3091, 3177
StyI CCWWGG 1 cut(s) 1485
TaiI ACGT 3 cut(s) 1665, 2250, 2319
TaqI TCGA 3 cut(s) 918, 1909, 3406
TaqII GACCGA 2 cut(s) 2193, 2783
TatI WGTACW 8 cut(s) 80, 689, 955, 994, 1405, 1880, 2673, 3139
TfiI GAWTC 7 cut(s) 497, 776, 1699, 2108, 2427, 2440, 2747
TscAI CASTG 9 cut(s) 705, 888, 1049, 1660, 2389, 2659, 2758, 2926, 3193
TseFI GTSAC 3 cut(s) 132, 1537, 2117
Tsp45I GTSAC 3 cut(s) 132, 1537, 2117
TspGWI ACGGA 2 cut(s) 1143, 2774
TspRI CASTG 9 cut(s) 705, 888, 1049, 1660, 2389, 2659, 2758, 2926, 3193
Tth111I GACNNNGTC 1 cut(s) 3179
Van91I CCANNNNNTGG 1 cut(s) 2884
Vha464I CTTAAG 1 cut(s) 2647
VpaK11BI GGWCC 1 cut(s) 815
XapI RAATTY 6 cut(s) 103, 170, 419, 512, 2224, 3100
XbaI TCTAGA 2 cut(s) 1070, 2542
XceI RCATGY 3 cut(s) 168, 320, 3074
XcmI CCANNNNNNNNNTGG 1 cut(s) 446
XmiI GTMKAC 2 cut(s) 544, 588
XmnI GAANNNNTTC 2 cut(s) 602, 2367
ZrmI AGTACT 1 cut(s) 3141
Zsp2I ATGCAT 3 cut(s) 1005, 1217, 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.