pycom04g20400

histone lysine demethylation

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
21917983 .. 21927946
9964 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g20400.11

Sequence Viewer

Length: 3444 bp
ATGCATGGATTTCCAGAGGGAGTAGGAAAAGCGGCGGAATTGGGGCAGCTGCAGTCCACCATGCACACCATCGAGCTCGCCTGCACTTCCATTCAGATGCATATGAATTCGGCTGCAGCTGAGGCAACTATTTTGTCGCTGTCCCAGACCCCCCAACCCTACCAGGCATGTAAATTCATTCTTGAGAACTCCCAAGTGGCAAATGCAAGGTTTGAGGCCGCAGCTGCAATTCGAAATGCAGCAATTAGAGAATGGAGTTCTCTTAGCTCTGATGACAAGAAAAGCATGATCAGTTTTTGTCTTTGTTTTGTTATGCAACATGCTAATTCACCTGAGGGCTATGTCCAAGCAAAGGTATCTTCTGTGGCTGCTCAATTGTTGAAAAGGGGCTGGCTTGAATTTTCAGCTAGTGATAAGGAGGCATTTTTCTATCAGGTAAACCAGGCTGCTTATGGCATTCATGGTGTAGATGTGCAGTTTGCTGGAATTAATTTCGTTGAATCTCTGGTTTCTGAATTTTCCCCGTCTACTTCAAGTCCGATGGGTCTTCCTAGAGAGTTTCATGAGCATTGCCAGAAGTCATTAGAGCAAGACCATTTGAAGACATTCTATTGCTGGGCAAGAGATGCTGCTTTAAGTGTGACAAATAGAATAGTTGAGTCTGACTCTGCGGTACCTGAGGTTAAAGTCTGTACTGCTGCGCTGCGTCTCATGCTTCAAATTCTGAATTGGGAATTCAGTACAAGTACATTTGCCGCTGGAGTCAAGCAAGGCAGTGATTCACCTAAGAGGTCCGAGTGTAACTTGGTGCAGCCTGGCCCAGCTTGGCGTGATGTTTTGGTTTCTAGTGGCCATATAGGGTGGCTCTTGAGCTTATATGGCGCTCTAAGGCAGAAGTTTCTGTGTGAAGGTTATTGGCTTGATTGCCCCATAGCTGTTACTGCCCGAAAGTTAATTGTACAGTTTTGCTCCCTGACAGGAACCATATTTCCATCTGACAATGTACAAATGCAAGAACACCACCTTCTCGAACTGCTTTGTGGAATAATACCATGGCTTGATCCTCCTGATGCTGTTTCTAAAGCGATTGAATGTGGAAAGAGTGAAAGCGAGATGCTTGACGGTTGTCGTGCTTTGTTGTCCATTGCAACTGTTACAACTCCCTCTGTGTTTGACCAACTGTTAAAATCAACAAGGCCCTATGGCACTCTTACCTTCTTGTGCGTACTGATGTCTGATGTTGTTAAGAACCTCATGACTAATAACTCTGAGGAAGAGACATGGAGCTGGGAGGCACGTGACATTTTGCTAGATACCTGGACTGCCCTTCTTGTGCCAGTTAATAGAAGTGGTGGGCATGCATTGCTTCCAGCCGAAGGGAAAAATGACACTGCTAATTTATTTGCCTTGATTGTACAGGCTGAACTAAAAGCTGCTTCTGCATCAGCATTTAAAGATGATGACTCCGACTACCTTCAGGCTTCCATTGTAGCCCTGGATGAGAGGTTAAGCTCATATGCTCTTATTGCTAGAGCAGCAATTGATGTCACCATTCCTTTTCTCACAAGCCTTTTTACTGAGCTGTTTGAACGGCTTAATCAGGGCAGGGGCATTATTGATCCAACTGAAACTTTGGAGGAGCTTTACTCGTTGTTACTCATCACTGGGCACGTGATCGCTGATGAAGGGGAGGGAGAAACACCACTGATTCCAAATGCTATACAAATTCATTTTCCAGACAATCTGGAAGCAAACAATCATCCTCTGGTCATCCTCTGTAGCTCAATTGTAAGGTTTGCTGAGCAAAGTTTACAACCAGAAATGAGAGCATCAGTTTTCAGTCCTCGACTAATGGAGGCTGTTATATGGTTCCTTGCAAGATGGTCTTGTACGTACCTAATGTCTCCCGAAGGAAATAGAGAAAGCAACTCTAAAAACGTCTTGCTTGGGTTTTTTGGACAACATAATCAGGGAAAATTTGTGCTTGACATTATTGTTCGCATATCCTTGACGACCTTGGCGTCATATCCTGGGGAAAAGGATCTGCAGGCAATCACTTGTTTCCAGCTACTTCATTCCCTTGTGCAGCAAAAACATATTTGTGTTCACCTTGTTGCATTGGACTCATGGCGTGACCTAGCAAAAGCTTTTGCTAATGAAAAGACTTTGTTCTTGTTAAATACAGCTCACCAGCGTTCACTTGCTCAGACACTTGTTCGTTCAGCTTCTGGCATGAGCAACTCAGAGGCATCCAACCTGTATGTGAGGGATCTCATGAGTCATATGGCAACGTATCTTGTAGAAATGACAAGCAAATCTGACTTTAAAAACATTGCTCAACAACCAGATATTATCCTGATGGTCAGTTGCTTTCTGGAGAGGCTACGGGGGGCCGCGAGTGCCTCAGAACCTCGTACACAAAAAGCGATTTATGAGCTCGGATTCTCTGTTATGAATCCTGTTCTAGTTCTTCTGGAGGTCTACAAACACGAGTCTGCAGTTGTGTATCTGATACTTAAGTTTGTAGTCGCCTGGGTGGATGGACAAATAAGCTATCTAGAGCCTCAGGAGACCGCTACTGTTGTTAACTTCTGCATGAGTTTGCTTCAGCTTTACTCATCAAACAATATTGGCAAGATATCAATAAGTCTGTCAAGCAGCTTACTTACTGAAGCAAAGACTGAGAAGTACAAGGATCTACGTGCTCTTCTCCAGCTCCTTTCAAGCCTTTGTTCCAAAGATCTGGTTGATTTTTCATCAGATTCTACAGAGACACAGGGCACCAACATATCTCAGGTCGTTTACTTTGGTCTTCATATAGTTACTCCTCTACTATCTTTGGACCTGCTTAAATACCCCAAGTTCTGCTATGATTACTTCTCGTTGCTGTCACATTTATTGGAGGTCTATCCTGAAACCGTTGCACAATTGAACAGCGACGCGTTTTCTCATGTACTAGGAACTCTTGAGTTTGGCCTTCATCATCAGGACATGGAAATAGTTGATATGTGTTTGAGAGCGTTGAGAGCTCTTGCTTCGTACCACTATAAGGAAACAAGTGCTGGCAAAGTAGGCTTGGGCTCACATGCTGCAGGTCTAAAGGATTCTGGTGGAAATTTTCAAGAAGGCATTTTGAGCCGGTTCCTTCGCTCGGTGCTGCAGTTGCTCCTTTTTGAGGATTATAGTCCTGACCTGGTCAGCGGTGCAGCAGATGCTCTTCTTCCGCTAATACTTTGCGAACAAAGCCTATACCAGAGATTAGGCAGTGAATTGATTGAGAGGCAGGCGAATGCAAGCTTGAAATCGCGGCTGACAAATGCATTGCAGCGTCTTACAAGCGCGAATCAGCTTTCATCTACCCTTGATCGTAAGAACCATCAAGTATTCAGGAAAAATCTCAACAGTTTCCTGATTGAAGTCCGAGGGTTCTTGCGGACAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1148

Amino Acids

127.11

Weight (kDa)

5.5

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2020
Acc36I ACCTGC 2 cut(s) 2853, 3083
Acc65I GGTACC 1 cut(s) 673
AccB1I GGYRCC 2 cut(s) 673, 2780
AccI GTMKAC 2 cut(s) 527, 2481
AccII CGCG 4 cut(s) 2396, 2942, 3307, 3341
AclWI GGATC 5 cut(s) 1055, 1613, 2049, 2277, 2703
AcoI YGGCCR 1 cut(s) 850
AcsI RAATTY 9 cut(s) 106, 173, 398, 515, 720, 734, 1725, 1976, 3115
AcuI CTGAAG 3 cut(s) 1460, 2591, 2691
AcvI CACGTG 2 cut(s) 1298, 1672
AcyI GRCGYC 1 cut(s) 2021
AfiI CCNNNNNNNGG 5 cut(s) 352, 1376, 3049, 3151, 3175
AflII CTTAAG 1 cut(s) 2516
AflIII ACRYGT 1 cut(s) 2940
AjnI CCWGG 8 cut(s) 162, 441, 814, 1316, 1494, 2029, 2531, 3192
AloI GAACNNNNNNTCC 2 cut(s) 973, 1005
Alw21I GWGCWC 4 cut(s) 78, 2439, 2707, 3031
Alw26I GTCTC 5 cut(s) 713, 1271, 1908, 2564, 2765
AlwI GGATC 5 cut(s) 1055, 1613, 2049, 2277, 2703
AlwNI CAGNNNCTG 1 cut(s) 2228
AoxI GGCC 6 cut(s) 216, 817, 850, 1196, 2391, 2974
ApoI RAATTY 9 cut(s) 106, 173, 398, 515, 720, 734, 1725, 1976, 3115
AseI ATTAAT 1 cut(s) 489
Asp700I GAANNNNTTC 1 cut(s) 605
Asp718I GGTACC 1 cut(s) 673
AspLEI GCGC 3 cut(s) 703, 884, 3341
AspS9I GGNCC 5 cut(s) 792, 818, 1197, 2391, 2842
AsuHPI GGTGA 5 cut(s) 321, 774, 1540, 2099, 2180
AsuII TTCGAA 1 cut(s) 232
AvaII GGWCC 2 cut(s) 792, 2842
AxyI CCTNAGG 3 cut(s) 333, 678, 2565
BaeGI GKGCMC 2 cut(s) 1671, 2783
BaeI ACNNNNGTAYC 2 cut(s) 2504, 2537
BalI TGGCCA 1 cut(s) 852
BanI GGYRCC 2 cut(s) 673, 2780
BanII GRGCYC 4 cut(s) 78, 2439, 3031, 3083
BauI CACGAG 1 cut(s) 2489
BbrPI CACGTG 2 cut(s) 1298, 1672
BbsI GAAGAC 3 cut(s) 539, 608, 2804
Bbv12I GWGCWC 4 cut(s) 78, 2439, 2707, 3031
BbvCI CCTCAGC 1 cut(s) 120
BccI CCATC 7 cut(s) 77, 535, 1000, 1875, 2353, 2534, 3384
BceAI ACGGC 1 cut(s) 1607
BciT130I CCWGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
BclI TGATCA 1 cut(s) 288
BcoDI GTCTC 5 cut(s) 713, 1271, 1908, 2564, 2765
BfaI CTAG 9 cut(s) 408, 552, 846, 1310, 1530, 2138, 2465, 2558, 2957
BfmI CTRYAG 8 cut(s) 50, 114, 1777, 2045, 2496, 2766, 3090, 3158
BfoI RGCGCY 1 cut(s) 885
BfrI CTTAAG 1 cut(s) 2516
BfuAI ACCTGC 2 cut(s) 2853, 3083
BglII AGATCT 1 cut(s) 2740
BlpI GCTNAGC 1 cut(s) 1800
Bme1390I CCNGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
Bme18I GGWCC 2 cut(s) 792, 2842
BmgT120I GGNCC 5 cut(s) 792, 818, 1197, 2391, 2842
BmiI GGNNCC 6 cut(s) 675, 982, 1871, 2392, 2782, 3143
BmrFI CCNGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
BmrI ACTGGG 1 cut(s) 1674
BmsI GCATC 8 cut(s) 87, 616, 1060, 1104, 1451, 1838, 2258, 3202
BmuI ACTGGG 1 cut(s) 1674
BoxI GACNNNNGTC 1 cut(s) 1125
BpiI GAAGAC 3 cut(s) 539, 608, 2804
BplI GAGNNNNNCTC 4 cut(s) 650, 682, 1631, 1663
BpmI CTGGAG 4 cut(s) 780, 2396, 2495, 2696
Bpu10I CCTNAGC 1 cut(s) 120
Bpu1102I GCTNAGC 1 cut(s) 1800
Bpu14I TTCGAA 1 cut(s) 232
BpuEI CTTGAG 3 cut(s) 203, 889, 2987
BsaAI YACGTR 4 cut(s) 1298, 1672, 1893, 2702
BsaHI GRCGYC 1 cut(s) 2021
BsaI GGTCTC 1 cut(s) 2564
BsaJI CCNNGG 6 cut(s) 1052, 1494, 2016, 2030, 2532, 3421
Bsc4I CCNNNNNNNGG 5 cut(s) 352, 1376, 3049, 3151, 3175
Bse118I RCCGGY 1 cut(s) 3138
Bse1I ACTGG 2 cut(s) 1337, 1669
Bse21I CCTNAGG 3 cut(s) 333, 678, 2565
Bse3DI GCAATG 5 cut(s) 568, 1143, 1361, 2331, 3320
BseBI CCWGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
BseDI CCNNGG 6 cut(s) 1052, 1494, 2016, 2030, 2532, 3421
BseGI GGATG 5 cut(s) 1504, 1759, 1770, 2249, 2545
BseLI CCNNNNNNNGG 5 cut(s) 352, 1376, 3049, 3151, 3175
BseMI GCAATG 5 cut(s) 568, 1143, 1361, 2331, 3320
BseNI ACTGG 2 cut(s) 1337, 1669
BseRI GAGGAG 2 cut(s) 1652, 2817
BseSI GKGCMC 2 cut(s) 1671, 2783
BseYI CCCAGC 3 cut(s) 615, 820, 1287
BsgI GTGCAG 5 cut(s) 67, 494, 830, 2105, 3225
Bsh1236I CGCG 4 cut(s) 2396, 2942, 3307, 3341
BshFI GGCC 6 cut(s) 218, 819, 852, 1198, 2393, 2976
BshNI GGYRCC 2 cut(s) 673, 2780
BsiHKAI GWGCWC 4 cut(s) 78, 2439, 2707, 3031
BsiSI CCGG 1 cut(s) 3139
BslFI GGGAC 1 cut(s) 127
BslI CCNNNNNNNGG 5 cut(s) 352, 1376, 3049, 3151, 3175
BsmAI GTCTC 5 cut(s) 713, 1271, 1908, 2564, 2765
BsmBI CGTCTC 1 cut(s) 713
BsmFI GGGAC 1 cut(s) 127
BsmI GAATGC 2 cut(s) 456, 3295
BsnI GGCC 6 cut(s) 218, 819, 852, 1198, 2393, 2976
Bso31I GGTCTC 1 cut(s) 2564
Bsp119I TTCGAA 1 cut(s) 232
Bsp1286I GDGCHC 7 cut(s) 78, 1671, 2439, 2707, 2783, 3031, 3083
Bsp1407I TGTACA 3 cut(s) 958, 1003, 1414
Bsp143I GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
Bsp1720I GCTNAGC 1 cut(s) 1800
Bsp19I CCATGG 1 cut(s) 1052
BspANI GGCC 6 cut(s) 218, 819, 852, 1198, 2393, 2976
BspFNI CGCG 4 cut(s) 2396, 2942, 3307, 3341
BspHI TCATGA 3 cut(s) 562, 1254, 2274
BspLI GGNNCC 6 cut(s) 675, 982, 1871, 2392, 2782, 3143
BspMAI CTGCAG 6 cut(s) 54, 118, 2049, 2500, 3094, 3162
BspMI ACCTGC 2 cut(s) 2853, 3083
BspPI GGATC 5 cut(s) 1055, 1613, 2049, 2277, 2703
BspQI GCTCTTC 2 cut(s) 2712, 3222
BspT104I TTCGAA 1 cut(s) 232
BspT107I GGYRCC 2 cut(s) 673, 2780
BspTI CTTAAG 1 cut(s) 2516
BspTNI GGTCTC 1 cut(s) 2564
BsrDI GCAATG 5 cut(s) 568, 1143, 1361, 2331, 3320
BsrFI RCCGGY 1 cut(s) 3138
BsrGI TGTACA 3 cut(s) 958, 1003, 1414
BsrI ACTGG 2 cut(s) 1337, 1669
BssAI RCCGGY 1 cut(s) 3138
BssECI CCNNGG 6 cut(s) 1052, 1494, 2016, 2030, 2532, 3421
BssMI GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
BssNI GRCGYC 1 cut(s) 2021
BssSI CACGAG 1 cut(s) 2489
BssT1I CCWWGG 2 cut(s) 1052, 2016
Bst2BI CACGAG 1 cut(s) 2489
Bst2UI CCWGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
Bst4CI ACNGT 8 cut(s) 963, 1124, 1153, 1182, 2581, 2920, 3404, 3439
Bst6I CTCTTC 3 cut(s) 1269, 2712, 3222
BstACI GRCGYC 1 cut(s) 2021
BstAFI CTTAAG 1 cut(s) 2516
BstAPI GCANNNNNTGC 3 cut(s) 626, 1363, 3212
BstAUI TGTACA 3 cut(s) 958, 1003, 1414
BstBAI YACGTR 4 cut(s) 1298, 1672, 1893, 2702
BstBI TTCGAA 1 cut(s) 232
BstC8I GCNNGC 8 cut(s) 78, 82, 392, 1359, 2049, 3064, 3285, 3295
BstDSI CCRYGG 1 cut(s) 1052
BstENI CCTNNNNNAGG 1 cut(s) 3173
BstF5I GGATG 5 cut(s) 1504, 1759, 1770, 2249, 2545
BstFNI CGCG 4 cut(s) 2396, 2942, 3307, 3341
BstH2I RGCGCY 1 cut(s) 885
BstHHI GCGC 3 cut(s) 703, 884, 3341
BstKTI GATC 9 cut(s) 291, 1063, 1621, 1677, 2044, 2272, 2698, 2743, 3367
BstMAI GTCTC 5 cut(s) 713, 1271, 1908, 2564, 2765
BstMBI GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
BstNI CCWGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
BstNSI RCATGY 4 cut(s) 171, 323, 1361, 3089
BstPAI GACNNNNGTC 1 cut(s) 1125
BstSCI CCNGG 8 cut(s) 162, 441, 814, 1316, 1494, 2029, 2531, 3192
BstSFI CTRYAG 8 cut(s) 50, 114, 1777, 2045, 2496, 2766, 3090, 3158
BstSLI GKGCMC 2 cut(s) 1671, 2783
BstSNI TACGTA 1 cut(s) 1893
BstUI CGCG 4 cut(s) 2396, 2942, 3307, 3341
BstV2I GAAGAC 3 cut(s) 539, 608, 2804
BstX2I RGATCY 4 cut(s) 2041, 2269, 2695, 2740
BstXI CCANNNNNNTGG 1 cut(s) 2743
BstYI RGATCY 4 cut(s) 2041, 2269, 2695, 2740
Bsu36I CCTNAGG 3 cut(s) 333, 678, 2565
BsuRI GGCC 6 cut(s) 218, 819, 852, 1198, 2393, 2976
BtgI CCRYGG 1 cut(s) 1052
BtsCI GGATG 5 cut(s) 1504, 1759, 1770, 2249, 2545
BtsI GCAGTG 3 cut(s) 781, 1389, 3271
BtsIMutI CAGTG 6 cut(s) 781, 1389, 1662, 1703, 3271, 3444
BveI ACCTGC 2 cut(s) 2853, 3083
Cac8I GCNNGC 8 cut(s) 78, 82, 392, 1359, 2049, 3064, 3285, 3295
CaiI CAGNNNCTG 1 cut(s) 2228
CciI TCATGA 3 cut(s) 562, 1254, 2274
CfoI GCGC 3 cut(s) 703, 884, 3341
Cfr10I RCCGGY 1 cut(s) 3138
Cfr13I GGNCC 5 cut(s) 792, 818, 1197, 2391, 2842
CseI GACGC 4 cut(s) 695, 2010, 2948, 3317
CsiI ACCWGGT 1 cut(s) 3192
DpnI GATC 9 cut(s) 290, 1062, 1620, 1676, 2043, 2271, 2697, 2742, 3366
DpnII GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
DraI TTTAAA 2 cut(s) 1453, 2326
DrdI GACNNNNNNGTC 1 cut(s) 2020
DseDI GACNNNNNNGTC 1 cut(s) 2020
EaeI YGGCCR 1 cut(s) 850
Eam1104I CTCTTC 3 cut(s) 1269, 2712, 3222
EarI CTCTTC 3 cut(s) 1269, 2712, 3222
EciI GGCGGA 1 cut(s) 50
Ecl136II GAGCTC 3 cut(s) 76, 2437, 3029
Eco105I TACGTA 1 cut(s) 1893
Eco130I CCWWGG 2 cut(s) 1052, 2016
Eco24I GRGCYC 4 cut(s) 78, 2439, 3031, 3083
Eco31I GGTCTC 1 cut(s) 2564
Eco32I GATATC 1 cut(s) 2640
Eco47I GGWCC 2 cut(s) 792, 2842
Eco53kI GAGCTC 3 cut(s) 76, 2437, 3029
Eco57I CTGAAG 3 cut(s) 1460, 2591, 2691
Eco72I CACGTG 2 cut(s) 1298, 1672
Eco81I CCTNAGG 3 cut(s) 333, 678, 2565
EcoICRI GAGCTC 3 cut(s) 76, 2437, 3029
EcoNI CCTNNNNNAGG 1 cut(s) 3173
EcoO109I RGGNCCY 1 cut(s) 1197
EcoRI GAATTC 2 cut(s) 106, 734
EcoRII CCWGG 8 cut(s) 162, 441, 814, 1316, 1494, 2029, 2531, 3192
EcoRV GATATC 1 cut(s) 2640
EcoT14I CCWWGG 2 cut(s) 1052, 2016
EcoT22I ATGCAT 4 cut(s) 6, 102, 1363, 3322
EcoT38I GRGCYC 4 cut(s) 78, 2439, 3031, 3083
ErhI CCWWGG 2 cut(s) 1052, 2016
Esp3I CGTCTC 1 cut(s) 713
FalI AAGNNNNNCTT 2 cut(s) 1870, 1902
FaqI GGGAC 1 cut(s) 127
FauNDI CATATG 3 cut(s) 102, 1516, 2283
FbaI TGATCA 1 cut(s) 288
FblI GTMKAC 2 cut(s) 527, 2481
FokI GGATG 5 cut(s) 1511, 1746, 1757, 2236, 2552
FriOI GRGCYC 4 cut(s) 78, 2439, 3031, 3083
FspBI CTAG 9 cut(s) 408, 552, 846, 1310, 1530, 2138, 2465, 2558, 2957
GlaI GCGC 3 cut(s) 702, 883, 3340
GsaI CCCAGC 3 cut(s) 619, 824, 1291
GsuI CTGGAG 4 cut(s) 780, 2396, 2495, 2696
HaeII RGCGCY 1 cut(s) 885
HaeIII GGCC 6 cut(s) 218, 819, 852, 1198, 2393, 2976
HapII CCGG 1 cut(s) 3139
HgaI GACGC 4 cut(s) 695, 2010, 2948, 3317
HhaI GCGC 3 cut(s) 703, 884, 3341
Hin1I GRCGYC 1 cut(s) 2021
Hin6I GCGC 3 cut(s) 701, 882, 3339
HinP1I GCGC 3 cut(s) 701, 882, 3339
HincII GTYRAC 1 cut(s) 2587
HindII GTYRAC 1 cut(s) 2587
HindIII AAGCTT 2 cut(s) 2145, 3295
HpaI GTTAAC 1 cut(s) 2587
HpaII CCGG 1 cut(s) 3139
HphI GGTGA 5 cut(s) 321, 774, 1540, 2099, 2180
Hpy99I CGWCG 1 cut(s) 2942
HpyCH4III ACNGT 8 cut(s) 963, 1124, 1153, 1182, 2581, 2920, 3404, 3439
HpyCH4IV ACGT 6 cut(s) 1297, 1671, 1892, 1938, 2291, 2701
HpySE526I ACGT 6 cut(s) 1297, 1671, 1892, 1938, 2291, 2701
Hsp92I GRCGYC 1 cut(s) 2021
HspAI GCGC 3 cut(s) 701, 882, 3339
KpnI GGTACC 1 cut(s) 677
Ksp22I TGATCA 1 cut(s) 288
KspAI GTTAAC 1 cut(s) 2587
Kzo9I GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
LguI GCTCTTC 2 cut(s) 2712, 3222
LmnI GCTCC 5 cut(s) 974, 1284, 1639, 2721, 3171
LweI GCATC 8 cut(s) 87, 616, 1060, 1104, 1451, 1838, 2258, 3202
MabI ACCWGGT 1 cut(s) 3192
MaeI CTAG 9 cut(s) 408, 552, 846, 1310, 1530, 2138, 2465, 2558, 2957
MaeII ACGT 6 cut(s) 1297, 1671, 1892, 1938, 2291, 2701
MalI GATC 9 cut(s) 290, 1062, 1620, 1676, 2043, 2271, 2697, 2742, 3366
MboI GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
MboII GAAGA 9 cut(s) 351, 539, 613, 1286, 2462, 2699, 2804, 3209, 3212
MfeI CAATTG 4 cut(s) 374, 1539, 1785, 2927
MflI RGATCY 4 cut(s) 2041, 2269, 2695, 2740
MhlI GDGCHC 7 cut(s) 78, 1671, 2439, 2707, 2783, 3031, 3083
MlsI TGGCCA 1 cut(s) 852
MluI ACGCGT 1 cut(s) 2940
MluNI TGGCCA 1 cut(s) 852
MlyI GAGTC 7 cut(s) 659, 668, 771, 1457, 2117, 2287, 2501
MmeI TCCRAC 3 cut(s) 1491, 1646, 2277
Mox20I TGGCCA 1 cut(s) 852
Mph1103I ATGCAT 4 cut(s) 6, 102, 1363, 3322
MroXI GAANNNNTTC 1 cut(s) 605
MscI TGGCCA 1 cut(s) 852
MslI CAYNNNNRTG 2 cut(s) 95, 2100
Msp20I TGGCCA 1 cut(s) 852
MspA1I CMGCKG 5 cut(s) 49, 119, 224, 758, 3201
MspCI CTTAAG 1 cut(s) 2516
MspI CCGG 1 cut(s) 3139
MspR9I CCNGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
MunI CAATTG 4 cut(s) 374, 1539, 1785, 2927
Mva1269I GAATGC 2 cut(s) 456, 3295
MvaI CCWGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
MvnI CGCG 4 cut(s) 2396, 2942, 3307, 3341
NcoI CCATGG 1 cut(s) 1052
NdeI CATATG 3 cut(s) 102, 1516, 2283
NdeII GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
NlaIV GGNNCC 6 cut(s) 675, 982, 1871, 2392, 2782, 3143
NmuCI GTSAC 5 cut(s) 640, 1298, 1546, 2132, 2889
NsiI ATGCAT 4 cut(s) 6, 102, 1363, 3322
NspI RCATGY 4 cut(s) 171, 323, 1361, 3089
NspV TTCGAA 1 cut(s) 232
PaeI GCATGC 1 cut(s) 1361
PagI TCATGA 3 cut(s) 562, 1254, 2274
PciSI GCTCTTC 2 cut(s) 2712, 3222
PcsI WCGNNNNNNNCGW 1 cut(s) 2018
PctI GAATGC 2 cut(s) 456, 3295
PdmI GAANNNNTTC 1 cut(s) 605
PfeI GAWTC 8 cut(s) 500, 779, 1708, 2442, 2455, 2762, 3104, 3343
PflFI GACNNNGTC 1 cut(s) 3194
PleI GAGTC 7 cut(s) 659, 667, 770, 1457, 2117, 2286, 2500
PmaCI CACGTG 2 cut(s) 1298, 1672
PmlI CACGTG 2 cut(s) 1298, 1672
PpsI GAGTC 7 cut(s) 659, 667, 770, 1457, 2117, 2286, 2500
Ppu21I YACGTR 4 cut(s) 1298, 1672, 1893, 2702
PshAI GACNNNNGTC 1 cut(s) 1125
PshBI ATTAAT 1 cut(s) 489
Psp124BI GAGCTC 3 cut(s) 78, 2439, 3031
Psp6I CCWGG 8 cut(s) 162, 441, 814, 1316, 1494, 2029, 2531, 3192
PspCI CACGTG 2 cut(s) 1298, 1672
PspFI CCCAGC 3 cut(s) 615, 820, 1287
PspGI CCWGG 8 cut(s) 162, 441, 814, 1316, 1494, 2029, 2531, 3192
PspN4I GGNNCC 6 cut(s) 675, 982, 1871, 2392, 2782, 3143
PspPI GGNCC 5 cut(s) 792, 818, 1197, 2391, 2842
PstI CTGCAG 6 cut(s) 54, 118, 2049, 2500, 3094, 3162
PstNI CAGNNNCTG 1 cut(s) 2228
PsuI RGATCY 4 cut(s) 2041, 2269, 2695, 2740
PsyI GACNNNGTC 1 cut(s) 3194
PvuII CAGCTG 3 cut(s) 49, 119, 224
RseI CAYNNNNRTG 2 cut(s) 95, 2100
SacI GAGCTC 3 cut(s) 78, 2439, 3031
SapI GCTCTTC 2 cut(s) 2712, 3222
Sau3AI GATC 9 cut(s) 288, 1060, 1618, 1674, 2041, 2269, 2695, 2740, 3364
Sau96I GGNCC 5 cut(s) 792, 818, 1197, 2391, 2842
SchI GAGTC 7 cut(s) 659, 668, 771, 1457, 2117, 2287, 2501
ScrFI CCNGG 8 cut(s) 164, 443, 816, 1318, 1496, 2031, 2533, 3194
SduI GDGCHC 7 cut(s) 78, 1671, 2439, 2707, 2783, 3031, 3083
SexAI ACCWGGT 1 cut(s) 3192
SfaNI GCATC 8 cut(s) 87, 616, 1060, 1104, 1451, 1838, 2258, 3202
SfcI CTRYAG 8 cut(s) 50, 114, 1777, 2045, 2496, 2766, 3090, 3158
SfuI TTCGAA 1 cut(s) 232
SinI GGWCC 2 cut(s) 792, 2842
SmiMI CAYNNNNRTG 2 cut(s) 95, 2100
SmlI CTYRAG 4 cut(s) 182, 868, 2516, 2966
SmoI CTYRAG 4 cut(s) 182, 868, 2516, 2966
SnaBI TACGTA 1 cut(s) 1893
SphI GCATGC 1 cut(s) 1361
SspI AATATT 1 cut(s) 2629
SspMI CTAG 9 cut(s) 408, 552, 846, 1310, 1530, 2138, 2465, 2558, 2957
SstI GAGCTC 3 cut(s) 78, 2439, 3031
StyD4I CCNGG 8 cut(s) 162, 441, 814, 1316, 1494, 2029, 2531, 3192
StyI CCWWGG 2 cut(s) 1052, 2016
TaaI ACNGT 8 cut(s) 963, 1124, 1153, 1182, 2581, 2920, 3404, 3439
TaiI ACGT 6 cut(s) 1300, 1674, 1895, 1941, 2294, 2704
TaqI TCGA 4 cut(s) 72, 232, 1029, 1846
TatI WGTACW 8 cut(s) 692, 740, 746, 958, 1003, 1414, 2688, 2953
TauI GCSGC 5 cut(s) 35, 221, 758, 2396, 3310
TfiI GAWTC 8 cut(s) 500, 779, 1708, 2442, 2455, 2762, 3104, 3343
TscAI CASTG 6 cut(s) 781, 1396, 1669, 1710, 3271, 3444
TseFI GTSAC 5 cut(s) 640, 1298, 1546, 2132, 2889
Tsp45I GTSAC 5 cut(s) 640, 1298, 1546, 2132, 2889
TspRI CASTG 6 cut(s) 781, 1396, 1669, 1710, 3271, 3444
Tth111I GACNNNGTC 1 cut(s) 3194
Vha464I CTTAAG 1 cut(s) 2516
VpaK11BI GGWCC 2 cut(s) 792, 2842
VspI ATTAAT 1 cut(s) 489
XagI CCTNNNNNAGG 1 cut(s) 3173
XapI RAATTY 9 cut(s) 106, 173, 398, 515, 720, 734, 1725, 1976, 3115
XbaI TCTAGA 1 cut(s) 2557
XceI RCATGY 4 cut(s) 171, 323, 1361, 3089
XcmI CCANNNNNNNNNTGG 2 cut(s) 449, 1492
XmiI GTMKAC 2 cut(s) 527, 2481
XmnI GAANNNNTTC 1 cut(s) 605
XspI CTAG 9 cut(s) 408, 552, 846, 1310, 1530, 2138, 2465, 2558, 2957
Zsp2I ATGCAT 4 cut(s) 6, 102, 1363, 3322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.