Rh3DG020900

histone lysine demethylation

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
1332788 .. 1344532
11745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG020900.1

Sequence Viewer

Length: 3429 bp
ATGCAAGGATTTGCGGAGAGAGGTAATTCAGGGGACTTGGCCCAGCTCCAGTCCACCATGCACGCCATTGAGCTTGCCTGCACTTCTATTCAGATGCAGATGAATTTAGGTGCTGCCGAAGCAACTATTTTGTCACTTTCCCAGACTCCTCAACCATACCAGACATGTAAATTCATTCTTGAGAACTCTCAGGTTGCAAATGCAAGGTTTCAGGCTGCAGCAGCAATTCGTGATGCAGCTATTAGAGAATGGGGTTTTCTTAGCTCAGATGAAAAGAGAAGCATGATTAGTTTTTGTCTTTGTTTTGTTATGCAACATGCTAATTCACCTGAGGGCTATGTCCAAGCAAAGGTGTCCTCTGTGGCTGCTCAATTGTTGAAAAGGGGTTGGCTTGATTTCTCAGCTGCTGAGAAGGAGGAATTTTTCTATCAGGTAAACCAGGCTGTTTATGGCATTCATGGTGTAGATGTGCAGTTTGCTGGAATTAATTTCCTGGAATCTCTGGTGTCTGAATTTTCTCCATCTACTTCAAGTGCAATGGGTCTACCTAGAGAGTTTCATGAGCATTGCAAAAAGTCATTGGAGCTAGACCACTTGAAGACTTTCTATTGCTGGGCACGAGATGCTGCATTAAGTGTTACAAATAGAATAGTTGAGTCTGACTCTGCGGTACCGGAGGTTAAAGTCTGTACTGCTGCATTGCGTCTCATGCTTCAAACCCTGAACTGGGAATTCAGTCCAATTGCAGTCCCTCTTGGAGGCACGATGGGTACTGATTCACCTAAGAGATCTGAGTGTAACCAAGTCCAGCCTGGACCTGCTTGGCGTGAAGTTTTGGTTACTAGTGGCCATATAGCCTGGCTCCTGAGCTTATATGCGGCACTGAGACAGAAGTTTTCTTGTGAAGGTTATTGGCTCGATTGCCCTATTGCTGTCTCTGCTAGAAAGTTAATAGTACAGTTCTGCTCCTTAACAGGAACCATATTTTCATCTGTACAAATGCATGAACACCATCTCCTCCAACTTCTTTCTGGAATAATACAGTGGATTGATCCTCCTGATGCTGTTTCTAGAGCGATTGAATGTGGAAAAAGTGAAAGCGAGATGCTTGATGGTTGTCGTGCTTTGTTGTCAATAGCAACTGTTGCAACTCCCTCAACATTTGACCAGCTCTTAAAATCAACAAGGTCCTTTGGTACTCTTACCTTGTTATGCATATTGATGTCTGAAGTTGTCAAGAACCTAATGACTAACAACTCTGAAGAAGAAACTTGGAGCTGGGAGGCACGTGATATCTTACTAGACACTTGGACTGCACTCCTTGTGCCAGTAAATAGGAATAGTGGAAATGCATCACTTCCACCTGAAGGGAGAAATGCTACAGCCAGTTTATTTGCCTTGATTGTACAGGCTGAACTGAAAGCTGCTTCTGCATCAGCATTTAAAGATGATGACTCCGACTACCTTCAGGCTTCTATCTCGGCCTTGGATGAGAGGTTAAGCTCCTATGCTCTTATTGGTAGAACAGCAATTGAGGTCACAGTACCTTTTCTCACAGGACTGTTTTCTGAGCACTTTGAACGGCTTAATCAGGGCAGGGGCATTATCGATCCAACTGAAACTTTAGAGGAACTTTACTCATTGCTACTTATCACTGGGCACTTAATCGCTGATGAAGGGGAGGGAGAAACACCTCTGATCCCAAATGCTATACGATTTCATCTTCCGCACAATCTGGAAGCAGAGATGCACCCTATTGTCATCCTTTGTGGCTCAATCATAAGGTTTGCCGAGGAAAGTTTAAAACCAGAAATGAGAGCGTCGGTTTTCAGTCCCCGACTCATGGAGGCCATCATATGGTTCCTTGCTAGATGGTCTTGTACGTACCTAATGTCTCCTGAAGAAAGTCAAGACTCCACAACTGTCTTGCTCAAATTTTTTGGACAACACGGTCAAGGAAAATTGGTTCTGGACATAATTGTTCGCATATCCTTGACAGCACTGGTGTCATATCCTGGAGAAAAGTACCTGCAGGCTCTTACTTGCTTCCAGCTACTTCATGCACTTGTTCAGCAAAAACATATTTGCATTCATCTTGTTGCTTTGGATTCATGGCGTGACCTTGCAAATGCTTTTGCTAATGAAAAAACTTTGTTCTTGTTAAATACAGCTCACCAGCGTTCACTTGCTCAAACACTTGTTCGGTCAGCTTCTGGTATGAGAAATTCAGAGGCATCAAACCAGTATGTAAGGGATCTCATGGGTCATATGGCAACATATCTTGTTGAAATCACAAGCAAGAATGACTTTAAAAACGTTGCTCAACAACCAGATATCATCCTGCCGGTCAGTTGCTTGTTGGAGAGGCTTCGTGGGGCTGCCAGTGCCTCTGAACCTCGTTTACAGAAAGCAATTTATGAGCTCGGATTCTCTGCAATGAACCCTGTTTTGATTCTTCTTGAGGTTTACAAACATGAGTCTGCAGTTGTATATCTGCTACTTAAGTTTGTAGTTGATTGGGTGGATGGACAAATAAGCTATCTAGAGGCTCAGGAAACTGCTGTTGTTGTCAATTTCTGCATGAGTTTGCTTCGTCTTTATTCATCAAACAATATTGGCAAGATATCAATAACTCTTTCAAGCAGCTTAAGCACTGAAGCAAAGACTGAGAAGTACAAGGATTTGCGTGCTCTACTCCAGCTCCTTTCAAGCCTTTGTTCCAAAGATTTGGTTGATTTTTCATCAGATTCCACTGAGACAGAGAGCACAAACATATCTCAGGTTGTTTACTTCGGTCTTCATATAATTACTCCTCTAATATCGTTGGAGCTGCTGAAATACCCCAAGTTTTGTTTTGATTACTTCTCATTGCTCTCCCATTTGTTGGAGGTCTATCCTGAAACAGTTGCACAACTAAGCAACGAAGCCTTTTCTCATGTACTAGGAACTCTTGATTTTGGTCTTCACCATCAGGATGCCGAAGTTGTTGATATGTGTCTCAGAGCTTTAAGAGCTCTTGCTTCTTACCACTATTTGGAAACTAGTGCCGGTAAAGTAGGCTTGGGCTCACATGCTGCAGGCCTCAAGGATCCTGGTGGAAATTTTCAGGAAGGCATTTTGAGCCGGTTCCTTCGTTCAGTACTGCAATTACTCCTTTTTGGGGATTATAGTCCTGACCTGGTCAGCGGTGCTGCAGACGCTCTTCTTCCGTTGATACTTTGTGAACAAAGCCTATACCAGAAATTAGGCAATGAGTTGATAGAGAGGCAGGCAAATGAAACATTGAAATCAAGACTATCAAATGCTTTGCGGTCTCTCACAAGTGCGAACCAGCTTTCATCTACCATTGATCGTAAAAATTGTCAAATATTCAGGAAAAATCTTAGTAACTTCTTGGTTGATGTTCGAGGTTTTTTGCGAACAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1142

Amino Acids

126.65

Weight (kDa)

5.48

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1950
Acc36I ACCTGC 2 cut(s) 826, 2037
Acc65I GGTACC 1 cut(s) 670
AccB1I GGYRCC 1 cut(s) 670
AccB7I CCANNNNNTGG 3 cut(s) 1857, 2884, 3034
AccI GTMKAC 1 cut(s) 544
AciI CCGC 6 cut(s) 14, 668, 878, 1727, 3186, 3310
AclI AACGTT 1 cut(s) 2316
AclWI GGATC 6 cut(s) 1046, 1604, 1693, 2262, 3083, 3096
AcoI YGGCCR 1 cut(s) 847
AcsI RAATTY 8 cut(s) 103, 170, 419, 512, 731, 1934, 2224, 3100
AcuI CTGAAG 6 cut(s) 1248, 1281, 1386, 1451, 1920, 2676
AcvI CACGTG 1 cut(s) 1289
AflII CTTAAG 2 cut(s) 2501, 2647
AflIII ACRYGT 1 cut(s) 164
AhlI ACTAGT 2 cut(s) 842, 3041
AjnI CCWGG 7 cut(s) 438, 492, 811, 857, 2014, 3091, 3177
AloI GAACNNNNNNTCC 4 cut(s) 999, 1031, 1950, 1982
Alw21I GWGCWC 5 cut(s) 1575, 2424, 2692, 2768, 3016
Alw26I GTCTC 7 cut(s) 710, 880, 940, 1899, 2750, 3002, 3318
AlwI GGATC 6 cut(s) 1046, 1604, 1693, 2262, 3083, 3096
AlwNI CAGNNNCTG 2 cut(s) 407, 2213
AoxI GGCC 5 cut(s) 39, 847, 1482, 1848, 3079
ApoI RAATTY 8 cut(s) 103, 170, 419, 512, 731, 1934, 2224, 3100
AseI ATTAAT 1 cut(s) 486
Asp700I GAANNNNTTC 1 cut(s) 602
Asp718I GGTACC 1 cut(s) 670
AspS9I GGNCC 3 cut(s) 40, 815, 1188
AsuHPI GGTGA 4 cut(s) 318, 771, 2165, 2957
AvaII GGWCC 2 cut(s) 815, 1188
AxyI CCTNAGG 1 cut(s) 330
BaeGI GKGCMC 2 cut(s) 619, 1662
BalI TGGCCA 1 cut(s) 849
BamHI GGATCC 1 cut(s) 3088
BanI GGYRCC 1 cut(s) 670
BanII GRGCYC 3 cut(s) 2424, 3016, 3068
BauI CACGAG 1 cut(s) 618
BbrPI CACGTG 1 cut(s) 1289
BbsI GAAGAC 3 cut(s) 605, 2789, 2954
Bbv12I GWGCWC 5 cut(s) 1575, 2424, 2692, 2768, 3016
BccI CCATC 8 cut(s) 529, 760, 1020, 1106, 1859, 1866, 2519, 2976
BceAI ACGGC 1 cut(s) 1598
BciT130I CCWGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
BcoDI GTCTC 7 cut(s) 710, 880, 940, 1899, 2750, 3002, 3318
BcuI ACTAGT 2 cut(s) 842, 3041
BfmI CTRYAG 6 cut(s) 216, 1380, 2030, 2481, 3075, 3192
BfrI CTTAAG 2 cut(s) 2501, 2647
BfuAI ACCTGC 2 cut(s) 826, 2037
BglII AGATCT 1 cut(s) 788
BmcAI AGTACT 1 cut(s) 3141
Bme1390I CCNGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
Bme18I GGWCC 2 cut(s) 815, 1188
BmgT120I GGNCC 3 cut(s) 40, 815, 1188
BmiI GGNNCC 6 cut(s) 672, 863, 979, 1862, 3090, 3128
BmrFI CCNGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
BmrI ACTGGG 2 cut(s) 736, 1665
BmuI ACTGGG 2 cut(s) 736, 1665
BpiI GAAGAC 3 cut(s) 605, 2789, 2954
BplI GAGNNNNNCTC 2 cut(s) 647, 679
BpmI CTGGAG 3 cut(s) 32, 2037, 2681
Bpu10I CCTNAGC 2 cut(s) 866, 2550
BpuEI CTTGAG 3 cut(s) 200, 2480, 3068
Bsa29I ATCGAT 1 cut(s) 1608
BsaAI YACGTR 2 cut(s) 1289, 1884
BsaI GGTCTC 1 cut(s) 3318
BsaJI CCNNGG 2 cut(s) 1485, 1791
BsaWI WCCGGW 1 cut(s) 673
BsaXI ACNNNNNCTCC 4 cut(s) 999, 1029, 2685, 2715
Bse118I RCCGGY 3 cut(s) 2344, 3047, 3123
Bse1I ACTGG 8 cut(s) 49, 731, 1328, 1386, 1660, 2007, 2242, 2382
Bse21I CCTNAGG 1 cut(s) 330
Bse3DI GCAATG 7 cut(s) 543, 565, 698, 1640, 2442, 2867, 3256
BseBI CCWGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
BseCI ATCGAT 1 cut(s) 1608
BseDI CCNNGG 2 cut(s) 1485, 1791
BseGI GGATG 5 cut(s) 1495, 1761, 2337, 2530, 2980
BseMI GCAATG 7 cut(s) 543, 565, 698, 1640, 2442, 2867, 3256
BseNI ACTGG 8 cut(s) 49, 731, 1328, 1386, 1660, 2007, 2242, 2382
BseRI GAGGAG 3 cut(s) 138, 1007, 2802
BseSI GKGCMC 2 cut(s) 619, 1662
BseYI CCCAGC 3 cut(s) 42, 612, 1278
BsgI GTGCAG 3 cut(s) 64, 491, 1299
BshFI GGCC 5 cut(s) 41, 849, 1484, 1850, 3081
BshNI GGYRCC 1 cut(s) 670
BshVI ATCGAT 1 cut(s) 1608
BsiHKAI GWGCWC 5 cut(s) 1575, 2424, 2692, 2768, 3016
BsiSI CCGG 4 cut(s) 674, 2345, 3048, 3124
BslFI GGGAC 3 cut(s) 47, 734, 1818
BsmAI GTCTC 7 cut(s) 710, 880, 940, 1899, 2750, 3002, 3318
BsmBI CGTCTC 1 cut(s) 710
BsmFI GGGAC 3 cut(s) 47, 734, 1818
BsmI GAATGC 2 cut(s) 453, 2088
BsnI GGCC 5 cut(s) 41, 849, 1484, 1850, 3081
Bso31I GGTCTC 1 cut(s) 3318
Bsp1286I GDGCHC 8 cut(s) 619, 1575, 1662, 2424, 2692, 2768, 3016, 3068
Bsp1407I TGTACA 2 cut(s) 994, 1405
Bsp143I GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
BspACI CCGC 6 cut(s) 14, 668, 878, 1727, 3186, 3310
BspANI GGCC 5 cut(s) 41, 849, 1484, 1850, 3081
BspDI ATCGAT 1 cut(s) 1608
BspHI TCATGA 1 cut(s) 559
BspLI GGNNCC 6 cut(s) 672, 863, 979, 1862, 3090, 3128
BspMAI CTGCAG 5 cut(s) 220, 2034, 2485, 3079, 3196
BspMI ACCTGC 2 cut(s) 826, 2037
BspPI GGATC 6 cut(s) 1046, 1604, 1693, 2262, 3083, 3096
BspQI GCTCTTC 1 cut(s) 3207
BspT107I GGYRCC 1 cut(s) 670
BspTI CTTAAG 2 cut(s) 2501, 2647
BspTNI GGTCTC 1 cut(s) 3318
BsrDI GCAATG 7 cut(s) 543, 565, 698, 1640, 2442, 2867, 3256
BsrFI RCCGGY 3 cut(s) 2344, 3047, 3123
BsrGI TGTACA 2 cut(s) 994, 1405
BsrI ACTGG 8 cut(s) 49, 731, 1328, 1386, 1660, 2007, 2242, 2382
BssAI RCCGGY 3 cut(s) 2344, 3047, 3123
BssECI CCNNGG 2 cut(s) 1485, 1791
BssMI GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
BssSI CACGAG 1 cut(s) 618
BssT1I CCWWGG 1 cut(s) 1485
Bst2BI CACGAG 1 cut(s) 618
Bst2UI CCWGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
Bst4CI ACNGT 8 cut(s) 960, 1044, 1144, 1543, 1563, 1924, 1952, 2905
Bst6I CTCTTC 1 cut(s) 3207
BstAFI CTTAAG 2 cut(s) 2501, 2647
BstAPI GCANNNNNTGC 2 cut(s) 623, 1145
BstAUI TGTACA 2 cut(s) 994, 1405
BstBAI YACGTR 2 cut(s) 1289, 1884
BstC8I GCNNGC 7 cut(s) 63, 75, 79, 2034, 2688, 3079, 3270
BstENI CCTNNNNNAGG 1 cut(s) 756
BstF5I GGATG 5 cut(s) 1495, 1761, 2337, 2530, 2980
BstKTI GATC 7 cut(s) 791, 1054, 1612, 1701, 2257, 3091, 3352
BstMAI GTCTC 7 cut(s) 710, 880, 940, 1899, 2750, 3002, 3318
BstMBI GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
BstNI CCWGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
BstNSI RCATGY 3 cut(s) 168, 320, 3074
BstSCI CCNGG 7 cut(s) 438, 492, 811, 857, 2014, 3091, 3177
BstSFI CTRYAG 6 cut(s) 216, 1380, 2030, 2481, 3075, 3192
BstSLI GKGCMC 2 cut(s) 619, 1662
BstSNI TACGTA 1 cut(s) 1884
BstV2I GAAGAC 3 cut(s) 605, 2789, 2954
BstX2I RGATCY 3 cut(s) 788, 2254, 3088
BstXI CCANNNNNNTGG 1 cut(s) 2728
BstYI RGATCY 3 cut(s) 788, 2254, 3088
Bsu15I ATCGAT 1 cut(s) 1608
Bsu36I CCTNAGG 1 cut(s) 330
BsuRI GGCC 5 cut(s) 41, 849, 1484, 1850, 3081
BsuTUI ATCGAT 1 cut(s) 1608
BtsCI GGATG 5 cut(s) 1495, 1761, 2337, 2530, 2980
BtsIMutI CAGTG 7 cut(s) 881, 1049, 1653, 2000, 2389, 2652, 2751
BveI ACCTGC 2 cut(s) 826, 2037
Cac8I GCNNGC 7 cut(s) 63, 75, 79, 2034, 2688, 3079, 3270
CaiI CAGNNNCTG 2 cut(s) 407, 2213
CciI TCATGA 1 cut(s) 559
Cfr10I RCCGGY 3 cut(s) 2344, 3047, 3123
Cfr13I GGNCC 3 cut(s) 40, 815, 1188
ClaI ATCGAT 1 cut(s) 1608
CseI GACGC 3 cut(s) 692, 1809, 3206
CsiI ACCWGGT 1 cut(s) 3177
DpnI GATC 7 cut(s) 790, 1053, 1611, 1700, 2256, 3090, 3351
DpnII GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
DraI TTTAAA 3 cut(s) 1444, 1803, 2311
DrdI GACNNNNNNGTC 1 cut(s) 1950
DseDI GACNNNNNNGTC 1 cut(s) 1950
EaeI YGGCCR 1 cut(s) 847
Eam1104I CTCTTC 1 cut(s) 3207
EarI CTCTTC 1 cut(s) 3207
Ecl136II GAGCTC 2 cut(s) 2422, 3014
Eco105I TACGTA 1 cut(s) 1884
Eco130I CCWWGG 1 cut(s) 1485
Eco147I AGGCCT 1 cut(s) 3081
Eco24I GRGCYC 3 cut(s) 2424, 3016, 3068
Eco31I GGTCTC 1 cut(s) 3318
Eco32I GATATC 3 cut(s) 1294, 2335, 2625
Eco47I GGWCC 2 cut(s) 815, 1188
Eco53kI GAGCTC 2 cut(s) 2422, 3014
Eco57I CTGAAG 6 cut(s) 1248, 1281, 1386, 1451, 1920, 2676
Eco72I CACGTG 1 cut(s) 1289
Eco81I CCTNAGG 1 cut(s) 330
EcoICRI GAGCTC 2 cut(s) 2422, 3014
EcoNI CCTNNNNNAGG 1 cut(s) 756
EcoO109I RGGNCCY 1 cut(s) 1188
EcoRI GAATTC 1 cut(s) 731
EcoRII CCWGG 7 cut(s) 438, 492, 811, 857, 2014, 3091, 3177
EcoRV GATATC 3 cut(s) 1294, 2335, 2625
EcoT14I CCWWGG 1 cut(s) 1485
EcoT22I ATGCAT 3 cut(s) 1005, 1217, 1354
EcoT38I GRGCYC 3 cut(s) 2424, 3016, 3068
ErhI CCWWGG 1 cut(s) 1485
Esp3I CGTCTC 1 cut(s) 710
FalI AAGNNNNNCTT 2 cut(s) 2291, 2323
FaqI GGGAC 3 cut(s) 47, 734, 1818
FauNDI CATATG 2 cut(s) 1856, 2268
FblI GTMKAC 1 cut(s) 544
FokI GGATG 5 cut(s) 1502, 1748, 2324, 2537, 2987
FriOI GRGCYC 3 cut(s) 2424, 3016, 3068
GsaI CCCAGC 3 cut(s) 46, 616, 1282
GsuI CTGGAG 3 cut(s) 32, 2037, 2681
HaeIII GGCC 5 cut(s) 41, 849, 1484, 1850, 3081
HapII CCGG 4 cut(s) 674, 2345, 3048, 3124
HgaI GACGC 3 cut(s) 692, 1809, 3206
HpaII CCGG 4 cut(s) 674, 2345, 3048, 3124
HphI GGTGA 4 cut(s) 318, 771, 2165, 2957
Hpy166II GTNNAC 8 cut(s) 54, 436, 545, 2183, 2402, 2467, 2788, 3224
Hpy8I GTNNAC 8 cut(s) 54, 436, 545, 2183, 2402, 2467, 2788, 3224
Hpy99I CGWCG 1 cut(s) 1825
HpyAV CCTTC 7 cut(s) 406, 899, 1361, 1475, 1670, 3104, 3140
HpyCH4III ACNGT 8 cut(s) 960, 1044, 1144, 1543, 1563, 1924, 1952, 2905
HpyCH4IV ACGT 3 cut(s) 1288, 1883, 2316
HpySE526I ACGT 3 cut(s) 1288, 1883, 2316
KpnI GGTACC 1 cut(s) 674
Kzo9I GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
LguI GCTCTTC 1 cut(s) 3207
LmnI GCTCC 8 cut(s) 51, 583, 867, 971, 1275, 1508, 2706, 2827
MabI ACCWGGT 1 cut(s) 3177
MaeII ACGT 3 cut(s) 1288, 1883, 2316
MaeIII GTNAC 7 cut(s) 132, 637, 797, 838, 1537, 2117, 3386
MalI GATC 7 cut(s) 790, 1053, 1611, 1700, 2256, 3090, 3351
MboI GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
MfeI CAATTG 3 cut(s) 371, 741, 1530
MflI RGATCY 3 cut(s) 788, 2254, 3088
MhlI GDGCHC 8 cut(s) 619, 1575, 1662, 2424, 2692, 2768, 3016, 3068
MlsI TGGCCA 1 cut(s) 849
MluNI TGGCCA 1 cut(s) 849
MlyI GAGTC 7 cut(s) 139, 656, 665, 1448, 1833, 1907, 2486
MmeI TCCRAC 6 cut(s) 1045, 1482, 1637, 2340, 2805, 2865
Mox20I TGGCCA 1 cut(s) 849
Mph1103I ATGCAT 3 cut(s) 1005, 1217, 1354
MroXI GAANNNNTTC 1 cut(s) 602
MscI TGGCCA 1 cut(s) 849
MslI CAYNNNNRTG 2 cut(s) 1220, 2973
Msp20I TGGCCA 1 cut(s) 849
MspA1I CMGCKG 2 cut(s) 404, 3186
MspCI CTTAAG 2 cut(s) 2501, 2647
MspI CCGG 4 cut(s) 674, 2345, 3048, 3124
MspR9I CCNGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
MunI CAATTG 3 cut(s) 371, 741, 1530
Mva1269I GAATGC 2 cut(s) 453, 2088
MvaI CCWGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
NdeI CATATG 2 cut(s) 1856, 2268
NdeII GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
NlaIV GGNNCC 6 cut(s) 672, 863, 979, 1862, 3090, 3128
NmeAIII GCCGAG 2 cut(s) 1460, 1816
NmuCI GTSAC 3 cut(s) 132, 1537, 2117
NsiI ATGCAT 3 cut(s) 1005, 1217, 1354
NspI RCATGY 3 cut(s) 168, 320, 3074
PagI TCATGA 1 cut(s) 559
PceI AGGCCT 1 cut(s) 3081
PciI ACATGT 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 3207
PctI GAATGC 2 cut(s) 453, 2088
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 6 cut(s) 497, 776, 2108, 2427, 2452, 2747
PflFI GACNNNGTC 1 cut(s) 3179
PflMI CCANNNNNTGG 3 cut(s) 1857, 2884, 3034
PfoI TCCNGGA 2 cut(s) 492, 2014
PleI GAGTC 7 cut(s) 139, 656, 664, 1448, 1833, 1907, 2485
PmaCI CACGTG 1 cut(s) 1289
PmlI CACGTG 1 cut(s) 1289
PpsI GAGTC 7 cut(s) 139, 656, 664, 1448, 1833, 1907, 2485
Ppu21I YACGTR 2 cut(s) 1289, 1884
PpuMI RGGWCCY 1 cut(s) 1188
PscI ACATGT 1 cut(s) 164
PshBI ATTAAT 1 cut(s) 486
Psp124BI GAGCTC 2 cut(s) 2424, 3016
Psp1406I AACGTT 1 cut(s) 2316
Psp5II RGGWCCY 1 cut(s) 1188
Psp6I CCWGG 7 cut(s) 438, 492, 811, 857, 2014, 3091, 3177
PspCI CACGTG 1 cut(s) 1289
PspFI CCCAGC 3 cut(s) 42, 612, 1278
PspGI CCWGG 7 cut(s) 438, 492, 811, 857, 2014, 3091, 3177
PspN4I GGNNCC 6 cut(s) 672, 863, 979, 1862, 3090, 3128
PspPI GGNCC 3 cut(s) 40, 815, 1188
PspPPI RGGWCCY 1 cut(s) 1188
PsrI GAACNNNNNNTAC 2 cut(s) 2385, 2417
PstI CTGCAG 5 cut(s) 220, 2034, 2485, 3079, 3196
PstNI CAGNNNCTG 2 cut(s) 407, 2213
PsuI RGATCY 3 cut(s) 788, 2254, 3088
PsyI GACNNNGTC 1 cut(s) 3179
PvuII CAGCTG 1 cut(s) 404
RseI CAYNNNNRTG 2 cut(s) 1220, 2973
SacI GAGCTC 2 cut(s) 2424, 3016
SapI GCTCTTC 1 cut(s) 3207
Sau3AI GATC 7 cut(s) 788, 1051, 1609, 1698, 2254, 3088, 3349
Sau96I GGNCC 3 cut(s) 40, 815, 1188
SbfI CCTGCAGG 1 cut(s) 2034
ScaI AGTACT 1 cut(s) 3141
SchI GAGTC 7 cut(s) 139, 656, 665, 1448, 1833, 1907, 2486
ScrFI CCNGG 7 cut(s) 440, 494, 813, 859, 2016, 3093, 3179
SdaI CCTGCAGG 1 cut(s) 2034
SduI GDGCHC 8 cut(s) 619, 1575, 1662, 2424, 2692, 2768, 3016, 3068
SexAI ACCWGGT 1 cut(s) 3177
SfcI CTRYAG 6 cut(s) 216, 1380, 2030, 2481, 3075, 3192
SinI GGWCC 2 cut(s) 815, 1188
SmiMI CAYNNNNRTG 2 cut(s) 1220, 2973
SmlI CTYRAG 5 cut(s) 179, 2459, 2501, 2647, 3083
SmoI CTYRAG 5 cut(s) 179, 2459, 2501, 2647, 3083
SnaBI TACGTA 1 cut(s) 1884
SpeI ACTAGT 2 cut(s) 842, 3041
Sse8387I CCTGCAGG 1 cut(s) 2034
SseBI AGGCCT 1 cut(s) 3081
SsiI CCGC 6 cut(s) 14, 668, 878, 1727, 3186, 3310
SspI AATATT 2 cut(s) 2614, 3369
SstI GAGCTC 2 cut(s) 2424, 3016
StuI AGGCCT 1 cut(s) 3081
StyD4I CCNGG 7 cut(s) 438, 492, 811, 857, 2014, 3091, 3177
StyI CCWWGG 1 cut(s) 1485
TaaI ACNGT 8 cut(s) 960, 1044, 1144, 1543, 1563, 1924, 1952, 2905
TaiI ACGT 3 cut(s) 1291, 1886, 2319
TaqI TCGA 3 cut(s) 918, 1608, 3406
TaqII GACCGA 2 cut(s) 2193, 2783
TatI WGTACW 7 cut(s) 689, 955, 994, 1405, 2673, 2938, 3139
TauI GCSGC 1 cut(s) 881
TfiI GAWTC 6 cut(s) 497, 776, 2108, 2427, 2452, 2747
TscAI CASTG 7 cut(s) 888, 1049, 1660, 2007, 2389, 2659, 2758
TseFI GTSAC 3 cut(s) 132, 1537, 2117
Tsp45I GTSAC 3 cut(s) 132, 1537, 2117
TspGWI ACGGA 1 cut(s) 3198
TspRI CASTG 7 cut(s) 888, 1049, 1660, 2007, 2389, 2659, 2758
Tth111I GACNNNGTC 1 cut(s) 3179
Van91I CCANNNNNTGG 3 cut(s) 1857, 2884, 3034
Vha464I CTTAAG 2 cut(s) 2501, 2647
VpaK11BI GGWCC 2 cut(s) 815, 1188
VspI ATTAAT 1 cut(s) 486
XagI CCTNNNNNAGG 1 cut(s) 756
XapI RAATTY 8 cut(s) 103, 170, 419, 512, 731, 1934, 2224, 3100
XbaI TCTAGA 2 cut(s) 1070, 2542
XceI RCATGY 3 cut(s) 168, 320, 3074
XcmI CCANNNNNNNNNTGG 3 cut(s) 446, 809, 1028
XmiI GTMKAC 1 cut(s) 544
XmnI GAANNNNTTC 1 cut(s) 602
ZrmI AGTACT 1 cut(s) 3141
Zsp2I ATGCAT 3 cut(s) 1005, 1217, 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.